RadishBase

| | | |
Alignment for radish unigene UN09091

               1      -     51
UN09091        --> TGTCTTCTATATAGTATATAAAAAAATAAAACAAGAAGAGGGAGAAACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY452863       <-- ..................................................
FY452887       <-- ..................................................
FY452876       <-- ..................................................
FD565164       <-- ..................................................
EV531415       <-- ..................................................
FY441414       <-- ..................................................
FY428569       --> TGTCTTCTATATAGTATATAAAAAA-TAAAACAAGAAGAGGGAGAAACAG
FY449645       --> ..............TATATAAAAAAATAAAACAAGAAGAGGGAGAAACAG
FY443893       --> ..................................GAAGAGGGAGAAACAG
FY450257       --> .....................................GAGGGAGAA-CAG
FY439503       --> ........................................GGAGAA-CAG
FY440879       --> ..................................................
FY454526       --> ..................................................
FY445766       --> ..................................................
FY447963       --> ..................................................
FY449085       --> ..................................................
FD560843       --> ..................................................
EV527093       --> ..................................................

               51     -    101
UN09091        --> TTTCTTCTTCTTCTTCTCAATCCAATGGCTCTTATGTTGCCATTGATCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY452863       <-- ..................................................
FY452887       <-- ..................................................
FY452876       <-- ..................................................
FD565164       <-- ..................................................
EV531415       <-- ..................................................
FY441414       <-- ..................................................
FY428569       --> TTTCTTCTTCTTCTTCTCAATCCAATGGCTCTTATGTTGCCATTGATCTT
FY449645       --> TTTCTTCTTCTTCTTCTCAATCCAATGGCTCTTATGTTGCCATTGATCTT
FY443893       --> TTTCTTCTTCTTCTTCTCAATCCAATGGCTCTTATGTTGCCATTGATCTT
FY450257       --> TTTCTTCTTCTTCTTCTCAATCCAATGGCTCTTATGTTGCCATTGATCTT
FY439503       --> TTTCTTCTTCTTCTTCTCA-TCCAATGGCTCTTATGTTGCCATTGATCTT
FY440879       --> ............CTTCTCAATCCAATGGCTCTTATGTTGCCATTGATCTT
FY454526       --> ............CTTCTCAATCCAATGGCTCTTATGTTGCCATTGATCTT
FY445766       --> ..................................................
FY447963       --> ..................................................
FY449085       --> ..................................................
FD560843       --> ..................................................
EV527093       --> ..................................................

               101    -    151
UN09091        --> GCTCTTGTTATCTCATTTCTTCTTCCCCGGGGTCGAACCGACGAGCTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY452863       <-- ..................................................
FY452887       <-- ..................................................
FY452876       <-- ..................................................
FD565164       <-- ..................................................
EV531415       <-- ..................................................
FY441414       <-- ..................................................
FY428569       --> GCTCTTGTTATCTCATTTCTTCTTCCCCGGGGTCGAACCGACGAGCTTTG
FY449645       --> GCTCTTGTTATCTCATTTCTTCTTCCCCGGGGTCGAACCGACGAGCTTTG
FY443893       --> GCTCTTGTTATCTCATTTCTTCTTCCCCGGGGTCGAACCGACGAGCTTTG
FY450257       --> GCTCTTGTTATCTCATTTCTTCTTCCCCGGGGTCGAACCGACGAGCTTTG
FY439503       --> GCTCTTGTTATCTCATTTCTTCTTCCCCGGGGTCGAACCGACGAGCTTTG
FY440879       --> GCTCTTGTTATCTCATTTCTTCTTCCCCGGGGTCGAACCGACGAGCTTTG
FY454526       --> GCTCTTGTTATCTCATTTCTTCTTCCCCGGGGTCGAACCGACGAGCTTTG
FY445766       --> ..................................................
FY447963       --> ..................................................
FY449085       --> ..................................................
FD560843       --> ..................................................
EV527093       --> ..................................................

               151    -    201
UN09091        --> TTATGGTGAACAAATGTGAATACACAGTCTGGCCGGGACTTCTATCCAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY452863       <-- ..................................................
FY452887       <-- ..................................................
FY452876       <-- ..................................................
FD565164       <-- ..................................................
EV531415       <-- ..................................................
FY441414       <-- ..................................................
FY428569       --> TTATGGTGAACAAATGTGAATACACAGTCTGGCCGGGACTTCTATCCAAC
FY449645       --> TTATGGTGAACAAATGTGAATACACAGTCTGGCCGGGACTTCTATCCAAC
FY443893       --> TTATGGTGAACAAATGTGAATACACAGTCTGGCCGGGACTTCTATCCAAC
FY450257       --> TTATGGTGAACAAATGTGAATACACAGTCTGGCCGGGACTTCTATCCAAC
FY439503       --> TTATGGTGAACAAATGTGAATACACAGTCTGGCCGGGACTTCTATCCAAC
FY440879       --> TTATGGTGAACAAATGTGAATACACAGTCTGGCCGGGACTTCTATCCAAC
FY454526       --> TTATGGTGAACAAATGTGAATACACAGTCTGGCCGGGACTTCTATCCAAC
FY445766       --> ..................................................
FY447963       --> ..................................................
FY449085       --> ..................................................
FD560843       --> ..................................................
EV527093       --> ..................................................

               201    -    251
UN09091        --> GCCGGAGTTCCTCCCCTTCCGACGACCGGCTTCGTCCTCCAAAAAGGCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY452863       <-- ..................................................
FY452887       <-- ..................................................
FY452876       <-- ..................................................
FD565164       <-- ..................................................
EV531415       <-- ..................................................
FY441414       <-- ..................................................
FY428569       --> GCCGGAGTTCCTCCCCTTCCGACGACCGGCTTCGTCCTCCAAAAAGGCGA
FY449645       --> GCCGGAGTTCCTCCCCTTCCGACGACCGGCTTCGTCCTCCAAAAAGGCGA
FY443893       --> GCCGGAGTTCCTCCCCTTCCGACGACCGGCTTCGTCCTCCAAAAAGGCGA
FY450257       --> GCCGGAGTTCCTCCCCTTCCGACGACCGGCTTCGTCCTCCAAAAAGGCGA
FY439503       --> GCCGGAGTTCCTCCCCTTCCGACGACCGGCTTCGTCCTCCAAAAAGGCGA
FY440879       --> GCCGGAGTTCCTCCCCTTCCGACGACCGGCTTCGTCCTCCAAAAAGGCGA
FY454526       --> GCCGGAGTTCCTCCCCTTCCGACGACCGGCTTCGTCCTCCAAAAAGGCGA
FY445766       --> ..................................................
FY447963       --> ..................................................
FY449085       --> ..................................................
FD560843       --> ..................................................
EV527093       --> ..................................................

               251    -    301
UN09091        --> AGAGCGAACCATCAACGCTCCAACCTCATGGGGCGGTCGTTTCTGGGGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY452863       <-- ..................................................
FY452887       <-- ..................................................
FY452876       <-- ..................................................
FD565164       <-- ..................................................
EV531415       <-- ..................................................
FY441414       <-- ..................................................
FY428569       --> AGAGCGAACCATCAACGCTCCAACCTCATGGGGCGGTCGTTTCTGGGGGA
FY449645       --> AGAGCGAACCATCAACGCTCCAACCTCATGGGGCGGTCGTTTCTGGGGGA
FY443893       --> AGAGCGAACCATCAACGCTCCAACCTCATGGGGCGGTCGTTTCTGGGGGA
FY450257       --> AGAGCGAACCATCAACGCTCCAACCTCATGGGGCGGTCGTTTCTGGGGGA
FY439503       --> AGAGCGAACCATCAACGCTCCAACCTCATGGGGCGGTCGTTTCTGGGGGA
FY440879       --> AGAGCGAACCATCAACGCTCCAACCTCATGGGGCGGTCGTTTCTGGGGGA
FY454526       --> AGAGCGAACCATCAACGCTCCAACCTCATGGGGCGGTCGTTTCTGGGGGA
FY445766       --> ..................................................
FY447963       --> ..................................................
FY449085       --> ..................................................
FD560843       --> ..................................................
EV527093       --> ..................................................

               301    -    351
UN09091        --> GAACGCTCTGCTCCACCGACACCGACGGCAAATTCTCCTGCGCCACCGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY452863       <-- ..................................................
FY452887       <-- ..................................................
FY452876       <-- ..................................................
FD565164       <-- ..................................................
EV531415       <-- ..................................................
FY441414       <-- ..................................................
FY428569       --> GAACGCTCTGCTCCACCGACACCGACGGCAAATTCTCCTGCGCCACCGGC
FY449645       --> GAACGCTCTGCTCCACCGACACCGACGGCAAATTCTCCTGCGCCACCGGC
FY443893       --> GAACGCTCTGCTCCACCGACACCGACGGCAAATTCTCCTGCGCCACCGGC
FY450257       --> GAACGCTCTGCTCCACCGACACCGACGGCAAATTCTCCTGCGCCACCGGC
FY439503       --> GAACGCTCTGCTCCACCGACACCGACGGCAAATTCTCCTGCGCCACCGGC
FY440879       --> GAACGCTCTGCTCCACCGACACCGACGGCAAATTCTCCTGCGCCACCGGC
FY454526       --> GAACGCTCTGCTCCACCGACACCGACGGCAAATTCTCCTGCGCCACCGGC
FY445766       --> .............................cAATTCTCCTGCGCCACCGGC
FY447963       --> ..................................................
FY449085       --> ..................................................
FD560843       --> ..................................................
EV527093       --> ..................................................

               351    -    401
UN09091        --> GACTGCGGCTCCGGAACCCTCGAATGCTCCGGCTCCGGCGCAACCCCACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY452863       <-- ..................................................
FY452887       <-- ..................................................
FY452876       <-- ..................................................
FD565164       <-- ..................................................
EV531415       <-- ..................................................
FY441414       <-- ..................................................
FY428569       --> GACTGCGGCTCCGGAACCCTCGAATGCTCCGGCTCCGGCGCAACCCCACC
FY449645       --> GACTGCGGCTCCGGAACCCTCGAATGCTCCGGCTCCGGCGCAACCCCACC
FY443893       --> GACTGCGGCTCCGGAACCCTCGAATGCTCCGGCTCCGGCGCAACCCCACC
FY450257       --> GACTGCGGCTCCGGAACCCTCGAATGCTCCGGCTCCGGCGCAACCCCACC
FY439503       --> GACTGCGGCTCCGGAACCCTCGAATGCTCCGGCTCCGGCGCAACCCCACC
FY440879       --> GACTGCGGCTCCGGAACCCTCGAATGCTCCGGCTCCGGCGCAACCCCACC
FY454526       --> GACTGCGGCTCCGGAACCCTCGAATGCTCCGGCTCCGGCGCAACCCCACC
FY445766       --> GACTGCGGCTCCGGAACCCTCGAATGCTCCGGCTCCGGCGCAACCCCACC
FY447963       --> ..................................................
FY449085       --> ..................................................
FD560843       --> ..................................................
EV527093       --> ..................................................

               401    -    451
UN09091        --> GGCGACTCTGGCCGAGTTCACTCTCGACGGTTCGGGAGGCCTCGACTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY452863       <-- ..................................................
FY452887       <-- ..................................................
FY452876       <-- ..................................................
FD565164       <-- ..................................................
EV531415       <-- ..................................................
FY441414       <-- ..................................................
FY428569       --> GGCGACTCTGGCCGAGTTCACTCTCGACGGTTCGGGAGGCCTCGACTTCT
FY449645       --> GGCGACTCTGGCCGAGTTCACTCTCGACGGTTCGGGAGGCCTCGACTTCT
FY443893       --> GGCGACTCTGGCCGAGTTCACTCTCGACGGTTCGGGAGGCCTCGACTTCT
FY450257       --> GGCGACTCTGGCCGAGTTCACTCTCGACGGTTCGGGAGGCCTCGACTTCT
FY439503       --> GGCGACTCTGGCCGAGTTCACTCTCGACGGTTCGGGAGGCCTCGACTTCT
FY440879       --> GGCGACTCTGGCCGAGTTCACTCTCGACGGTTCGGGAGGCCTCGACTTCT
FY454526       --> GGCGACTCTGGCCGAGTTCACTCTCGACGGTTCGGGAGGCCTCGACTTCT
FY445766       --> GGCGACTCTGGCCGAGTTCACTCTCGACGGTTCGGGAGGCCTCGACTTCT
FY447963       --> ..................................................
FY449085       --> ..................................................
FD560843       --> ..................................................
EV527093       --> ..................................................

               451    -    501
UN09091        --> ACGACGTCAGCCTCGTGGACGGGTACAACGTCCCCATGCTCGTCGTCCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY452863       <-- ..................................................
FY452887       <-- ..................................................
FY452876       <-- ..................................................
FD565164       <-- ..................................................
EV531415       <-- ..................................................
FY441414       <-- ..................................................
FY428569       --> ACGACGTCAGCCT.....................................
FY449645       --> ACGACGTCAGCCTCGTGGACGGGTACAACGTCCCCATGCTCGTCGTCCCT
FY443893       --> ACGACGTCAGCCTCGTGGACGGGTACAACGTCCCCATGCTCGTCGTCCCT
FY450257       --> ACGACGTCAGCCTCGTGGACGGGTACAACGTCCCCATGCTCGTCGTCCCT
FY439503       --> ACGACGTCAGCCTCGTGGACGGGTACAACGTCCCCATGCTCGTCGTCCCT
FY440879       --> ACGACGTCAGCCTCGTGGACGGGTACAACGTCCCCATGCTCGTCGTCCCT
FY454526       --> ACGACGTCAGCCTCGTGGACGGGTACAACGTCCCCATGCTCGTCGTCCCT
FY445766       --> ACGACGTCAGCCTCGTGGACGGGTACAACGTCCCCATGCTCGTCGTCCCT
FY447963       --> ..................................................
FY449085       --> ..................................................
FD560843       --> ..................................................
EV527093       --> ..................................................

               501    -    551
UN09091        --> CAGGGAGGAACGGGACAGAACTGCAGCAGCACGGGCTGCGTCGTGGACCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY452863       <-- ..GGGAGGAACGGGACAGAACTGCAGCAGCACGGGCTGCGTCGTGGACCT
FY452887       <-- ...............CAGAACTGCAGCAGCACGGGCTGCGTCGTGGACCT
FY452876       <-- ..................................................
FD565164       <-- ..................................................
EV531415       <-- ..................................................
FY441414       <-- ..................................................
FY428569       --> ..................................................
FY449645       --> CAGGGAGGAACGGGACAGAACTGCAGCAGCACGGGCTGCGTCGTGGACCT
FY443893       --> CAGGGAGGAACGGGACAGAACTGCAGCAGCACGGGCTGCGTCGTGGACCT
FY450257       --> CAGGGAGGAACGGGACAGAACTGCAGCAGCACGGGCTGCGTCGTGGACCT
FY439503       --> CAGGGAGGAACGGGACAGAACTGCAGCAGCACGGGCTGCGTCGTGGACCT
FY440879       --> CAGGGAGGAACGGGACAGAACTGCAGCAGCACGGGCTGCGTCGTGGACCT
FY454526       --> CAGGGAGGAACGGGACAGAACTGCAGCAGCACGGGCTGCGTCGTGGACCT
FY445766       --> CAGGGAGGAACGGGACAGAACTGCAGCAGCACGGGCTGCGTCGTGGACCT
FY447963       --> ..................................................
FY449085       --> ..................................................
FD560843       --> ..................................................
EV527093       --> ..................................................

               551    -    601
UN09091        --> GAACGGTTCGTGTCCGACGGAGCTGAGGGTGACGAGCGTCGACGGAGCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY452863       <-- GAACGGTTCGTGTCCGACGGAGCTGAGGGTGACGAGCGTCGACGGAGCGA
FY452887       <-- GAACGGTTCGTGTCCGACGGAGCTGAGGGTGACGAGCGTCGACGGAGCGA
FY452876       <-- ..........................................CGGAGCGA
FD565164       <-- ..................................................
EV531415       <-- ..................................................
FY441414       <-- ..................................................
FY428569       --> ..................................................
FY449645       --> GAACGGTTCGTGTCCGACGGAGCTGAGGGTGACGAGCGTCGACGGAGCGA
FY443893       --> GAACGGTTCGTGTCCGACGGAGCTGAGGGTGACGAGCGTCGACGGAGCGA
FY450257       --> GAACGGTTCGTGTCCGACGGAGCTGAGGGTGACGAGCGTCGACGGAGCGA
FY439503       --> GAACGGTTCGTGTCCGACGGAGCTGAGGGTGACGAGCGTCGACGGAGCGA
FY440879       --> GAACGGTTCGTGTCCGACGGAGCTGAGGGTGACGAGCGTCGACGGAGCGA
FY454526       --> GAACGGTTCGTGTCCGACGGAGCTGAGGGTGACGAGCGTCGACGGAGCGA
FY445766       --> GAACGGTTCGTGTCCGACGGAGCTGAGGGTGACGAGCGTCGACGGAGCGA
FY447963       --> ..................................................
FY449085       --> ..................................................
FD560843       --> ..................................................
EV527093       --> ..................................................

               601    -    651
UN09091        --> AACAGTCCATGGGTTGCAAAAGCGCGTGCGAGGCGTTTCGGACGCCGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY452863       <-- AACAGTCCATGGGTTGCAAAAGCGCGTGCGAGGCGTTTCGGACGCCGGAG
FY452887       <-- AACAGTCCATGGGTTGCAAAAGCGCGTGCGAGGCGTTTCGGACGCCGGAG
FY452876       <-- AACAGTCCATGGGTTGCAAAAGCGCGTGCGAGGCGTTTCGGACGCCGGAG
FD565164       <-- ..................................................
EV531415       <-- ..................................................
FY441414       <-- ..................................................
FY428569       --> ..................................................
FY449645       --> AACAGTCCATGGGTTGCAAAAGCGCGTGCGAGGCGTTTCGGACGCCGGAG
FY443893       --> AACAGTCCATGGGTTGCAAAAGCGCGTGCGAGGCGTTTCGGACGCCGGAG
FY450257       --> AACAGTCCATGGGTTGCAAAAGCGCGTGCGAGGCGTTTCGGACGCCGGAG
FY439503       --> AACAGTCCATGGGTTGCAAAAGCGCGTGCGAGGCGTTTCGGACGCCGGAG
FY440879       --> AACAGTCCATGGGTTGCAAAAGCGCGTGCGAGGCGTTTCGGACGCCGGAG
FY454526       --> AACAGTCCATGGGTTGCAAAAGCGCGTGCGAGGCGTTTCGGACGCCGGAG
FY445766       --> AACAGTCCATGGGTTGCAAAAGCGCGTGCGAGGCGTTTCGGACGCCGGAG
FY447963       --> ..................AAAGCGCGTGCGAGGCGTTTCGGACGCCGGAG
FY449085       --> ..................AAAGCGCGTGCGAGGCGTTTCGGACGCCGGAG
FD560843       --> ..................................................
EV527093       --> ..................................................

               651    -    701
UN09091        --> TACTGCTGCAGCGGCGCGTTCGGGACGCCTGACACGTGTAAACCGTCGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY452863       <-- TACTGCTGCAGCGGCGCGTTCGGGACGCCTGACACGTGTAAACCGTCGTC
FY452887       <-- TACTGCTGCAGCGGCGCGTTCGGGACGCCTGACACGTGTAAACCGTCGTC
FY452876       <-- TACTGCTGCAGCGGCGCGTTCGGGACGCCTGACACGTGTAAACCGTCGTC
FD565164       <-- ..................................................
EV531415       <-- ..................................................
FY441414       <-- ..................................................
FY428569       --> ..................................................
FY449645       --> TACTGCTGCAGCGGCGCGTTCGGGACGCCTGACACGTGTAAACCGTCGTC
FY443893       --> TACTGCTGCAGCGGCGCGTTCGGGACGCCTGACACGTGTAAACCGTCGTC
FY450257       --> TACTGCTGCAGCGGCGCGTTCGGGACGCCTGACACGTGTAAACCGTCGTC
FY439503       --> TACTGCTGCAGCGGCGCGTTCGGGACGCCTGACACGTGTAAACCGTCGTC
FY440879       --> TACTGCTGCAGCGGCGCGTTCGGGACGCCTGACACGTGTAAACCGTCGTC
FY454526       --> TACTGCTGCAGCGGCGCGTTCGGGACGCCTGACACGTGTAAACCGTCGTC
FY445766       --> TACTGCTGCAGCGGCGCGTTCGGGACGCCTGACACGTGTAAACCGTCGTC
FY447963       --> TACTGCTGCAGCGGCGCGTTCGGGACGCCTGACACGTGTAAACCGTCGTC
FY449085       --> TACTGCTGCAGCGGCGCGTTCGGGACGCCTGACACGTGTAAACCGTCGTC
FD560843       --> ..................................................
EV527093       --> ..................................................

               701    -    751
UN09091        --> TTACTCGTTGGTGTTCAAGACTGCGTGCCCACGTGCGTACAGCTACGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY452863       <-- TTACTCGTTGGTGTTCAAGACTGCGTGCCCACGAGCGTACAGCTACGCTT
FY452887       <-- TTACTCGTTGGTGTTCAAGACTGCGTGCCCACGTGCGTACAGCTACGCTT
FY452876       <-- TTACTCGTTGGTGTTCAAGACTGCGTGCCCACGTGCGTACAGCTACGCTT
FD565164       <-- .....................gGCGTGCCCACGTGCGTACAGCTACGCTT
EV531415       <-- ...............................gGTGCGTACAGCTACGCTT
FY441414       <-- .....................................TACAGCTACGCTT
FY428569       --> ..................................................
FY449645       --> TTACTCGTTGGTGTTCAAGACTGCGTGCCCACGTGCGTACAGCTACGCTT
FY443893       --> TTACTCGTTGGTGTTCAAGACTGCGTGCCCACGTGCGTACAGCTACGCTT
FY450257       --> TTACTCGTTGGTGTTCAAGACTGCGTGCCCACGTGCGTACAGCTACGCTT
FY439503       --> TTACTCGTTGGTGTTCAAGACTGCGTGCCCACGTGCGTACAGCTACGCTT
FY440879       --> TTACTCGTTGGTGTTCAAGACTGCGTGCCCACGTGCGTACAGCTACGCTT
FY454526       --> TTACTCGTTGGTGTTCAAGACTGCGTGCCCACGTGCGTACAGCTACGCTT
FY445766       --> TTACTCGTTGGTGTTCAAGACTGCGTGCCCACGTGCGTACAGCTACGCTT
FY447963       --> TTACTCGTTGGTGTTCAAGACTGCGTGCCCACGTGCGTACAGCTACGCTT
FY449085       --> TTACTCGTTGGTGTTCAAGACTGCGTGCCCACGTGCGTACAGCTACGCTT
FD560843       --> .....................gGCGTGCCCACGTGCGTACAGCTACGCTT
EV527093       --> ...............................gGTGCGTACAGCTACGCTT

               751    -    801
UN09091        --> ACGATGATCAGAGCAGCACCTTCACATGCGCTAAGTCGCCTAACTACGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY452863       <-- ACGATGATCAGAGCAGCACCTTCACATGCGCTAAGTCGCCTAACTACGTC
FY452887       <-- ACGATGATCAGAGCAGCACCTTCACATGCGCTAAGTCGCCTAACTACGTC
FY452876       <-- ACGATGATCAGAGCAGCACCTTCACATGCGCTAAGTCGCCTAACTACGTC
FD565164       <-- ACGATGATCAGAGCAACACCTTCACATGCGCTAAGTCGCCTAACTACGTC
EV531415       <-- ACGATGATCAGAGCAGCACCTTCACATGCGCTAAGTCGCCTAACTACGTC
FY441414       <-- ACGATGATCAGAGCAGCACCTTCACATGCGCTAAGTCGCCTAACTACGTC
FY428569       --> ..................................................
FY449645       --> ACGATGATCAGAGCAGCACCTTCACATGCGCTAAGTCGCCTAACTACGTC
FY443893       --> ACGATGATCAGAGCAGCACCTTCACATGCGCTAAGTCGCCTAACTACGTC
FY450257       --> ACGATGATCAGAGCAGCACCTTCACATGCGCTAAGTCGCCTAACTACGTC
FY439503       --> ACGATGATCAGAGCAGCACCTTCACATGCGCTAAGTCGCCTAACTACGTC
FY440879       --> ACGATGATCAGAGCAGCACCTTCACATGCGCTAAGTCGCCTAACTACGTC
FY454526       --> ACGATGATCAGAGCAGCACCTTCACATGCGCTAAGTCGCCTAACTACGTC
FY445766       --> ACGATGATCAGAGCAGCACCTTCACATGCGCTAAGTCGCCTAACTACGTC
FY447963       --> ACGATGATCAGAGCAGCACCTTCACATGCGCTAAGTCGCCTAACTACGTC
FY449085       --> ACGATGATCAGAGCAGCACCTTCACATGCGCTAAGTCGCCTAACTACGTC
FD560843       --> ACGATGATCAGAGCAACACCTTCACATGCGCTAAGTCGCCTAACTACGTC
EV527093       --> ACGATGATCAGAGCAGCACCTTCACATGCGCTAAGTCGCCTAACTACGTC

               801    -    851
UN09091        --> ATCACGTTCTGTCCGTCTCCGAACACGAGTCAAAAATCATCTCAAGATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY452863       <-- ATCACGTTCTGTCCGTCTCCGAACACGAGTCAAAAATCATCTCAAGATCA
FY452887       <-- ATCACGTTCTGTCCGTCTCCGAACACGAGTCAAAAATCATCTCAAGATCA
FY452876       <-- ATCACGTTCTGTCCGTCTCCGAACACGAGTCAAAAATCATCTCAAGATCA
FD565164       <-- ATCACGTTCTGTCCGTCTCCGAACACGAGTCAAAAATCATCTCAAGATCA
EV531415       <-- ATCACGTTCTGTCCGTCTCCGAACACGAGTCAAAAATCATCTCAAGATCA
FY441414       <-- ATCACGTTCTGTCCGTCTCCGAACACGAGTCAAAAATCATCTCAAGATCA
FY428569       --> ..................................................
FY449645       --> ATCACGTTCTGTCCGTCTCCGAACACGAGTCAAAAATCAT..........
FY443893       --> ATCACGTTCTGTCCGTCTCCGAACACGAGTCAAAAATCATCTCAAGATCA
FY450257       --> ATCACGTTCTGTCCGTCTCCGAACACGAGTCAAAAATCATCTCAAGATCA
FY439503       --> ATCACGTTCTGTCCGTCTCCGAACACGAGTCAAAAATCATCTCAAGATCA
FY440879       --> ATCACGTTCTGTCCGTCTCCGAACACGAGTCAAAAATCAT..........
FY454526       --> ATCA..............................................
FY445766       --> ATCACGTTCTGTCCGTCTCCGAACACGAGTCAAAAATCATCTCAAGATCA
FY447963       --> ATCACGTTCTGTCCGTCTCCGAACACGAGTCAAAAATCATCTCAAGATCA
FY449085       --> ATCACGTTCTGTCCGTCTCCGAACACGAGTCAAAAATCATCTCAAGATCA
FD560843       --> ATCACGTTCTGTCCGTCTCCGAACACGAGTCAAAAATCATCTCAAGATCA
EV527093       --> ATCACGTTCTGTCCGTCTCCGAACACGAGTCAAAAATCATCTCAAGATCA

               851    -    901
UN09091        --> GAGCTCAGATTCCAGACCGACGACACCGTCAGGGACGTCGGCAACTCCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY452863       <-- GAGCTCAGATTCCAGACCGACGACACCGTCAGGGACGTCGGCAACTCCTG  Raphanus sativus cv GSK3-1
FY452887       <-- GAGCTCAGATTCCAGACCGACGACACCGTCAGGGACGTCGGCAACTCCTG  Raphanus sativus cv GSK3-1
FY452876       <-- GAGCTCAGATTCCAGACCGACGACACCGTCAGGGACGTCGGCAACTCCTG  Raphanus sativus cv GSK3-1
FD565164       <-- GAGCTCGGATTCCAGACCGACGACACCGTCAGGGACGTCGGCAACTCCTG  Raphanus sativus var. oleiformis
EV531415       <-- GAGCTCGGATTCCAGACCGACGACACCGTCAGGGACGTCGGCAACTCCTG  Raphanus raphanistrum subsp. maritimus
FY441414       <-- GAGCTCAGATTCCAGACCGACGACACCGTCAGGGACGTCGGCAACTCCTG  Raphanus sativus cv GSK3-1
FY428569       --> ..................................................  Raphanus sativus cv GSK3-1
FY449645       --> ..................................................  Raphanus sativus cv GSK3-1
FY443893       --> GAGCT.............................................  Raphanus sativus cv GSK3-1
FY450257       --> GAGCTCAGATTCCAGACCGACGACACCGT.....................  Raphanus sativus cv GSK3-1
FY439503       --> GAGCTCAGATTCC.....................................  Raphanus sativus cv GSK3-1
FY440879       --> ..................................................  Raphanus sativus cv GSK3-1
FY454526       --> ..................................................  Raphanus sativus cv GSK3-1
FY445766       --> GAGCTCAGATTCCAGACCGACGACACCGTCAGGGACGTCGGCAACTCCTG  Raphanus sativus cv GSK3-1
FY447963       --> GAGCTCAGATTCCAGACCGACGACACCGTCAGGGACGTCGGCAACTCCTG  Raphanus sativus cv GSK3-1
FY449085       --> GAGCTCAGATTCCAGACCGACGACACCGTCAGGGACGTCGGCAACTCCTG  Raphanus sativus cv GSK3-1
FD560843       --> GAGCTCGGATTCCAGACCGACGACACCGTCAGGGACGTCGGCAACTCCTG  Raphanus sativus var. oleiformis
EV527093       --> GAGCTCGGATTCCAGACCGACGACACCGTCAGGGACGTCGGCAACTCCTG  Raphanus raphanistrum subsp. maritimus

               901    -    951
UN09091        --> GCGGAGACAGTAGGACATGGTCGCCGGTAGATATGATATACGAAGGAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY452863       <-- GCGGAGACAGTAGGACATGGTCGCCGGTAGATATGATATACGAAGGAGCT
FY452887       <-- GCGGAGACAGTAGGACATGGTCGCCGGTAGATATGATATACGAAGGAGCT
FY452876       <-- GCGGAGACAGTAGGACATGGTCGCCGGTAGATATGATATACGAAGGAGCT
FD565164       <-- GCGGAGACAGTAGGACATGGTCGCCGGTAGATATGATATACGAAGGAGCT
EV531415       <-- GCGGAGACAGTAGGACATGGTCGCCGGTAGATATGATATACGAAGGAGCT
FY441414       <-- GCGGAGACAGTAGGACATGGTCGCCGGTAGATATGATATACGAAGGAGCT
FY428569       --> ..................................................
FY449645       --> ..................................................
FY443893       --> ..................................................
FY450257       --> ..................................................
FY439503       --> ..................................................
FY440879       --> ..................................................
FY454526       --> ..................................................
FY445766       --> GCGGAGACAGTAGGACATGGTCGCCGGTAGATATGATATACGAAGGAGCT
FY447963       --> GCGGAGACAGTAGGACATGGTCGCCGGTAGATATGATATACGAAGGAGCT
FY449085       --> GCGGAGACAGTAGGACATGGTCGCCGGTAGATATGATATACGAAGGAGCT
FD560843       --> GCGGAGACAGTAGGACATGGTCGCCGGTAGATATGATATACGAAGGAGCT
EV527093       --> GCGGAGACAGTAGGACATGGTCGCCGGTAGATATGATATACGAAGGAGCT

               951    -   1001
UN09091        --> CTGGATCAGAGCAAAGCATCAACGTCCACGTCTCATCTTTCGTTATGTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY452863       <-- CTGGATCAGAGCAAAGCATCAACGTCCACGTCTCATCTTTCGTTATGTGG
FY452887       <-- CTGGATCAGAGCAAAGCATCAACGTCCACGTCTCATCTTTCGTTATGTGG
FY452876       <-- CTGGATCAGAGCAAAGCATCAACGTCCACGTCTCATCTTTCGTTATGTGG
FD565164       <-- CTGGATCAGAGCAAAGCATCAACGTCCACGTCTCATCTTTCGTTATGTGG
EV531415       <-- CTGAATCAGAGCAAAGCATCAACGTCCACGTCTCATCTTTCGTTATGTGG
FY441414       <-- CTGGATCAGAGCAAAGCATCAACGTCCACGTCTCATCTTTCGTTATGTGG
FY428569       --> ..................................................
FY449645       --> ..................................................
FY443893       --> ..................................................
FY450257       --> ..................................................
FY439503       --> ..................................................
FY440879       --> ..................................................
FY454526       --> ..................................................
FY445766       --> CTGGATCAGAGCAAAGCATCAACGTCCACGTCTCATCTTTCGTTATGTGG
FY447963       --> CTGGATCAGAGCAAAGCATCAACGTCCACGTCTCATCTTTCGTTATGTGG
FY449085       --> CTGGATCAGAGCAAAGCATCAACGTCCACGTCTCATCTTTCGTTATGTGG
FD560843       --> CTGGATCAGAGCAAAGCATCAACGTCCACGTCTCATCTTTCGTTATGTGG
EV527093       --> CTGAATCAGAGCAAAGCATCAACGTCCACGTCTCATCTTTCGTTATGTGG

               1001   -   1051
UN09091        --> AATCACAGTCACTCTTGCGCTGGCATTTTGTCGGATGTGGTTGCTCTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY452863       <-- AATCACAGTCACTCTTGCGCTGGCATTTTGTCGGATGTGGTTGCTCTTTT  Raphanus sativus cv GSK3-1
FY452887       <-- AATCACAGTCACTCTTGCGCTGGCATTTTGTCGGATGTGGTTGCTCTTTT  Raphanus sativus cv GSK3-1
FY452876       <-- AATCACAGTCACTCTTGCGCTGGCATTTTGTCGGATGTGGTTGCTCTTTT  Raphanus sativus cv GSK3-1
FD565164       <-- AATCACAGTCACTCTTGCGCTGGCATTTTGTCGGATGTGGTGGCTCTTTT  Raphanus sativus var. oleiformis
EV531415       <-- AATCACAGTCACTCTTGCGCTGGCATTTTGTCGGATGTGGTGGCTCTTTT  Raphanus raphanistrum subsp. maritimus
FY441414       <-- AATCACAGTCACTCTTGCGCTGGCATTTTGTCGGATGTGGTTGCTCTTTT  Raphanus sativus cv GSK3-1
FY428569       --> ..................................................  Raphanus sativus cv GSK3-1
FY449645       --> ..................................................  Raphanus sativus cv GSK3-1
FY443893       --> ..................................................  Raphanus sativus cv GSK3-1
FY450257       --> ..................................................  Raphanus sativus cv GSK3-1
FY439503       --> ..................................................  Raphanus sativus cv GSK3-1
FY440879       --> ..................................................  Raphanus sativus cv GSK3-1
FY454526       --> ..................................................  Raphanus sativus cv GSK3-1
FY445766       --> AATCACAGTCACTCTTGCGCTGGCATTTTGTCGGATGTGGTTGCTCTTTT  Raphanus sativus cv GSK3-1
FY447963       --> AATCACAGTCACTCTTGCGCTGGCATTTTGTCGGATGTGGTTGCTCTTTT  Raphanus sativus cv GSK3-1
FY449085       --> AATCACAGTCACTCTTGCGCTGGCATTTTGTCGGATGTGGTTGCTCTTTT  Raphanus sativus cv GSK3-1
FD560843       --> AATCACAGTCACTCTTGCGCTGGCATTTTGTCGGATGTGGTGGCTCTTTT  Raphanus sativus var. oleiformis
EV527093       --> AATCACAGTCACTCTTGCGCTGGCATTTTGTCGGATGTGGTGGCTCTTTT  Raphanus raphanistrum subsp. maritimus

               1051   -   1101
UN09091        --> GACCTAACATTTGTCTCCCGCGGTAAACACTTAATCAGGACGATGTGGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY452863       <-- GACCTAACATTTGTCTCCCGCGGTAAACACTTAATCAGGACGATGTGGGC
FY452887       <-- GACCTAACATTTGTCTCCCGCGGTAAACACTTAATCAGGACGATGTGGGC
FY452876       <-- GACCTAACATTTGTCTCCCGCGGTAAACACTTAATCAGGACGATGTGGGC
FD565164       <-- GACCTAACATTTGTCTCCCGCGGTAAACACTTAATCAGGACGATGTGGGC
EV531415       <-- GACCTAACATTTGTCTCCCGCGGTAAATACTTAATCAGGACGATGTGGGC
FY441414       <-- GACCTAACATTTGTCTCCCGCGGTAAACACTTAATCAGGACGATGTGGGC
FY428569       --> ..................................................
FY449645       --> ..................................................
FY443893       --> ..................................................
FY450257       --> ..................................................
FY439503       --> ..................................................
FY440879       --> ..................................................
FY454526       --> ..................................................
FY445766       --> GACCTAACATTTGTCTCCCGCGGTAAACACTTAATCAGGACGATGTGGGC
FY447963       --> GACCTAACATTTGTCTCCCGCGGTAAACACTTAATCAGGACGATGTGGGC
FY449085       --> GACCTAACATTTGTCTCCCGCGGTAAACACTTAATCAGGACGATGTGGGC
FD560843       --> GACCTAACATTTGTCTCCCGCGGTAAACACTTAATCAGGACGATGTGGGC
EV527093       --> GACCTAACATTTGTCTCCCGCGGTAAATACTTAATCAGGACGATGTGGGC

               1101   -   1151
UN09091        --> CCTTACTATAAGCCTTATCTCTTCCCCGGCCCATGTGTCTTTTTCCTTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY452863       <-- CCTTACTATAAGCCTTATCTCTTCCCCGGCCCATGTGTCTTTTTCCTTAG
FY452887       <-- CCTTACTATAAGCCTTATCTCTTCCCCGGCCCATGTGTCTTTTTCCTTAG
FY452876       <-- CCTTACTATAAGCCTTATCTCTTCCCCGGCCCATGTGTCTTTTTCCTTAG
FD565164       <-- CCTTACTATAAGCCTTATTTCTTCCCCGGCCCATGTGTCTTTTTCCTTAG
EV531415       <-- CCTTACTATAAGCCTTATCTCTTCCCCGGCCCATGTGTCTTTTTCCTTAG
FY441414       <-- CCTTACTATAAGCCTTATCTCTTCCCCGGCCCATGTGTCTTTTTCCTTAG
FY428569       --> ..................................................
FY449645       --> ..................................................
FY443893       --> ..................................................
FY450257       --> ..................................................
FY439503       --> ..................................................
FY440879       --> ..................................................
FY454526       --> ..................................................
FY445766       --> CCTTACTATAAGCCTTATCTCTTCCCCGGCCCATGTGTCTTTTTCCTTAG
FY447963       --> CCTTACTATAAGCCTTATCTCTTCCCCGGCCCATGTGTCTTTTTCCTTAG
FY449085       --> CCTTACTATAAGCCTTATCTCTTCCCCGGCCCATGTGTCTTTTTCCTTAG
FD560843       --> CCTTACTATAAGCCTTATCTCTTCCCCGGCCCATGTGTCTTTTTCCTTAG
EV527093       --> CCTTACTATAAGCCTTATCTCTTCCCCGGCCCATGTGTCTTTTTCCTTAG

               1151   -   1201
UN09091        --> AACGACGTCGGTGTGAGTCAGAGTTGAAAAAGGTA-GAGCAAAAAAGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY452863       <-- AACGACGTCGGTGTGAGTCAGAGTTGAAAAAGGTA-GAGCAAAAAAGTTC  Raphanus sativus cv GSK3-1
FY452887       <-- AACGACGTCGGTGTGAGTCAGAGTTGAAAAAGGTA-GAGCAAAAAAGTTC  Raphanus sativus cv GSK3-1
FY452876       <-- AACGACGTCGGTGTGAGTCAGAGTTGAAAAAGGTA-GAGCAAAAAAGTTC  Raphanus sativus cv GSK3-1
FD565164       <-- AACGACGTCGGTGTGAGTCAGAGTTGAAAAAGGTAAGAGCAAAAAAGTTC  Raphanus sativus var. oleiformis
EV531415       <-- AACGACGTCGGTGTGAGTCAGAGTTGAAAAAGGTAAGAGCAAAAA-GTTC  Raphanus raphanistrum subsp. maritimus
FY441414       <-- AACGACGTCGGTGTGAGTCAGAGTTGAAAAAGGTA-GAGCAAAAAAGTTC  Raphanus sativus cv GSK3-1
FY428569       --> ..................................................  Raphanus sativus cv GSK3-1
FY449645       --> ..................................................  Raphanus sativus cv GSK3-1
FY443893       --> ..................................................  Raphanus sativus cv GSK3-1
FY450257       --> ..................................................  Raphanus sativus cv GSK3-1
FY439503       --> ..................................................  Raphanus sativus cv GSK3-1
FY440879       --> ..................................................  Raphanus sativus cv GSK3-1
FY454526       --> ..................................................  Raphanus sativus cv GSK3-1
FY445766       --> AACGACGTCGGTGTGAGTCAGAGTTGAAAAAGGTA-GAGCAAAAAAGTTC  Raphanus sativus cv GSK3-1
FY447963       --> AACGACGTCGGTGTGAGTCAGAGTTGAAAAAGGTA-GAGCAAAAAAGTTC  Raphanus sativus cv GSK3-1
FY449085       --> AACGACGTCGGTGTGAGTCAGAGTTGAAAAAGGTA-GAGCAAAAAAGTTC  Raphanus sativus cv GSK3-1
FD560843       --> AACGACGTCGGTGTGAGTCAGAGTTGAAAAAGGTAAGAGCAAAAAAGTTC  Raphanus sativus var. oleiformis
EV527093       --> AACGACGTCGGTGTGAGTCAGAGTTGAAAAAGGTAAGAGCAAAAA-GTTC  Raphanus raphanistrum subsp. maritimus

               1201   -   1251
UN09091        --> CTTACCCGAAATTACAACAGTACTAATCACGGGAGGATTCTTATTTTGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY452863       <-- CTTACCCGAAATTACAACAGTACTAATCACGGGAGGATTCTTATTTTGTG
FY452887       <-- CTTACCCGAAATTACAACAGTACTAATCACGGGAGGATTCTTATTTTGTG
FY452876       <-- CTTACCCGAAATTACAACAGTACTAATCACGGGAGGATTCTTATTTTGTG
FD565164       <-- CTTACCCGAAATTACAACAGTACTAATCACGGGAGGATTCTTATTTTGTG
EV531415       <-- CTTACCCGAAATTACAACAGTACTAATCACGGGAGGATTCTTATTTTGTG
FY441414       <-- CTTACCCGAAATTACAACAGTACTAATCACGGGAGGATTCTTATTTTGTG
FY428569       --> ..................................................
FY449645       --> ..................................................
FY443893       --> ..................................................
FY450257       --> ..................................................
FY439503       --> ..................................................
FY440879       --> ..................................................
FY454526       --> ..................................................
FY445766       --> CTTA..............................................
FY447963       --> CTTACCCGAAATTACAACAGTACTAATCACGGGAGGATTCTTATTTTGTG
FY449085       --> CTTACCCGAAATTACAACAGTACTAATCACGGGAGGATTCTTATTTTGTG
FD560843       --> CTTACCCGAAATTACAACAGTACTAATCACGGGAGGATTCTTATTTTGTG
EV527093       --> CTTACCCGAAATTACAACAGTACTAATCACGGGAGGATTCTTATTTTGTG

               1251   -   1301
UN09091        --> GTGAGGAACACGTGGGGAAAAGAAAGTGGGCTGCTTGAGGTGGTCAAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY452863       <-- GTGAGGAACACGTGGGGAAAAGAAAGTGGGCTGCTTGAGGTGGTCAAAAA  Raphanus sativus cv GSK3-1
FY452887       <-- GTGAGGAACACGTGGGGAAAAGAAAGTGGGCTGCTTGAGGTGGTCAAAAA  Raphanus sativus cv GSK3-1
FY452876       <-- GTGAGGAACACGTGGGGAAAAGAAAGTGGGCTGCTTGAGGTGGTCAAAAA  Raphanus sativus cv GSK3-1
FD565164       <-- GTGAGGAACACGTGGGGAAAAGAAAGTGGGCTGCTTGAGGAGGTCAAAAA  Raphanus sativus var. oleiformis
EV531415       <-- GTGAGGAACACGTGGGGAAAAGAAAGTGGGCTGCTTGAGGAGGTCAAAAA  Raphanus raphanistrum subsp. maritimus
FY441414       <-- GTGAGGAACACGTGGGGAAAAGAAAGTGGGCTGCTTGAGGTGGTCAAAAA  Raphanus sativus cv GSK3-1
FY428569       --> ..................................................  Raphanus sativus cv GSK3-1
FY449645       --> ..................................................  Raphanus sativus cv GSK3-1
FY443893       --> ..................................................  Raphanus sativus cv GSK3-1
FY450257       --> ..................................................  Raphanus sativus cv GSK3-1
FY439503       --> ..................................................  Raphanus sativus cv GSK3-1
FY440879       --> ..................................................  Raphanus sativus cv GSK3-1
FY454526       --> ..................................................  Raphanus sativus cv GSK3-1
FY445766       --> ..................................................  Raphanus sativus cv GSK3-1
FY447963       --> GTGAGGAACACGTGGGGAAAAGAAAGTGGGCTGCTTGAGGTGGTCAAAAA  Raphanus sativus cv GSK3-1
FY449085       --> GTGAGGAACACGTGGGGAAAAGAAAGTGGGCTGCTTGAGGTGGTCAAAAA  Raphanus sativus cv GSK3-1
FD560843       --> GTGAGGAACACGTGGGGAAAAGAAAGTGGGCTGCTTGAGGAGGTCAAAAA  Raphanus sativus var. oleiformis
EV527093       --> GTGAGGAACACGTGGGGAAAAGAAAGTGGGCTGCTTGAGGAGGTCAAAAA  Raphanus raphanistrum subsp. maritimus

               1301   -   1351
UN09091        --> GATGGGGATGATAATTGTAAGGTCACAGAATATTTGTTTAATTTTTAGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY452863       <-- GATGGGGATGATAATTGTAAGGTCACAGAATATTTGTTTAATTTTTAGTA
FY452887       <-- GATGGGGATGATAATTGTAAGGTCACAGAA....................
FY452876       <-- GATGGGGATGATAATTGTAAGGTCACAGAATATTTGTTTAATTTTTAGTA
FD565164       <-- GATGGGGATGATAATTGTAAGGTCACATAATATTTGTTTAATTTTTAGTA
EV531415       <-- GATGGGGATGATAATTGTAAGGTCACAGAATATTTGTTTAATTTTTAGTA
FY441414       <-- GATGGGGATGATAATTGTAAGGTCACAGAATATTTGTTTAATTTTTAGTA
FY428569       --> ..................................................
FY449645       --> ..................................................
FY443893       --> ..................................................
FY450257       --> ..................................................
FY439503       --> ..................................................
FY440879       --> ..................................................
FY454526       --> ..................................................
FY445766       --> ..................................................
FY447963       --> GATGGGGATGATAATTGTAAGGTCACAGAATATTTGTTTAATTTTTAGTA
FY449085       --> GATGGGGATGATAATTGTAAGGTCACAGAATATTTGTTTAATTTTTAGTA
FD560843       --> GATGGGGATGATAATTGTAAGGTCACATAATATTTGTTTAATTTTTAGTA
EV527093       --> GATGGGGATGATAATTGTAAGGTCACAGAATATTTGTTTAATTTTTAGTA

               1351   -   1401
UN09091        --> TGATTAGGATTAGAATATAATGTACACTACATAAAGTTAAATCTATTAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY452863       <-- TGATTAGGATTAGACTATAATGctactaca....................
FY452887       <-- ..................................................
FY452876       <-- TGATTAGGATTAGAATATAATGTACACTACATAAAGTTAAATCTATTAGT
FD565164       <-- TGATTAGGATTAGAATATAATGTACACTACATAAAGTTAAATCTATTAGT
EV531415       <-- TGATTAGGATTAGAATATAATGTACACTACATAAAGTTAAATCTATTAGT
FY441414       <-- TGATTAGGATTAGAATATAATGTACACTACATAAAGTTAAATCTATTAGT
FY428569       --> ..................................................
FY449645       --> ..................................................
FY443893       --> ..................................................
FY450257       --> ..................................................
FY439503       --> ..................................................
FY440879       --> ..................................................
FY454526       --> ..................................................
FY445766       --> ..................................................
FY447963       --> TGATTAGGATTAGAATATAATGTACACTACATAAAGTTAAATCTATTAGT
FY449085       --> TGATTAGGATTAGAATATAATGTACACTACATAAAGTTAAATCTATTAGT
FD560843       --> TGATTAGGATTAGAATATAATGTACACTACATAAAGTTAAATCTATTAGT
EV527093       --> TGATTAGGATTAGAATATAATGTACACTACATAAAGTTAAATCTATTAGT

               1401   -   1451
UN09091        --> TTTAAATGGGGGG-AATATTTCATTTGTTTGATATCTAATGCTGCGTTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY452863       <-- ..................................................  Raphanus sativus cv GSK3-1
FY452887       <-- ..................................................  Raphanus sativus cv GSK3-1
FY452876       <-- TTTAAATGGGGGGGAATATTTCATTTGTTTGTTATCTAATGCTGCGTTGG  Raphanus sativus cv GSK3-1
FD565164       <-- TTTAAATGGGGGG-AATATTTCATTTGTTTGATATCTAATGCTGCGTTGG  Raphanus sativus var. oleiformis
EV531415       <-- TTTAAATGGGGGG-AATATTTCATTTGTTTGATATCTAATGCTGCGTTGG  Raphanus raphanistrum subsp. maritimus
FY441414       <-- TTTAAATGGGGGGGAATATTTCATTTGTTTGTTATCTAATGCTGCGTTGG  Raphanus sativus cv GSK3-1
FY428569       --> ..................................................  Raphanus sativus cv GSK3-1
FY449645       --> ..................................................  Raphanus sativus cv GSK3-1
FY443893       --> ..................................................  Raphanus sativus cv GSK3-1
FY450257       --> ..................................................  Raphanus sativus cv GSK3-1
FY439503       --> ..................................................  Raphanus sativus cv GSK3-1
FY440879       --> ..................................................  Raphanus sativus cv GSK3-1
FY454526       --> ..................................................  Raphanus sativus cv GSK3-1
FY445766       --> ..................................................  Raphanus sativus cv GSK3-1
FY447963       --> TTTAAATGGGGGG.....................................  Raphanus sativus cv GSK3-1
FY449085       --> TTTAAATGGGGGGGAATATTTCATTTGTTTGTTATCTAATGCTGCGTTGG  Raphanus sativus cv GSK3-1
FD560843       --> TTTAAATGGGGGG-AATATTTCATTTGTTTGATATCTAATGCTGCGTTGG  Raphanus sativus var. oleiformis
EV527093       --> TTTAAATGGGGGG-AATATTTCATTTGTTTGATATCTAATGCTGCGTTGG  Raphanus raphanistrum subsp. maritimus

               1451   -   1501
UN09091        --> CCATTTGAAACATTGAAATGAATAATAATGCTACTACATGTTTTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY452863       <-- ...............................................  Raphanus sativus cv GSK3-1
FY452887       <-- ...............................................  Raphanus sativus cv GSK3-1
FY452876       <-- CCATTTGAAACATTGAAATGAACTATAATGCTACTA...........  Raphanus sativus cv GSK3-1
FD565164       <-- CCATTTGAAACATTGAAATGAATAATAATGCTACT............  Raphanus sativus var. oleiformis
EV531415       <-- CCATTTGAAACATTGAAATGAATAATAATGCTACTACATGTTTTGTT  Raphanus raphanistrum subsp. maritimus
FY441414       <-- CCATTTGAAACATTGAAATGAACTATAATGCTAC.............  Raphanus sativus cv GSK3-1
FY428569       --> ...............................................  Raphanus sativus cv GSK3-1
FY449645       --> ...............................................  Raphanus sativus cv GSK3-1
FY443893       --> ...............................................  Raphanus sativus cv GSK3-1
FY450257       --> ...............................................  Raphanus sativus cv GSK3-1
FY439503       --> ...............................................  Raphanus sativus cv GSK3-1
FY440879       --> ...............................................  Raphanus sativus cv GSK3-1
FY454526       --> ...............................................  Raphanus sativus cv GSK3-1
FY445766       --> ...............................................  Raphanus sativus cv GSK3-1
FY447963       --> ...............................................  Raphanus sativus cv GSK3-1
FY449085       --> CCATTTGAAACATTGAA-TGAACTATAATGCTACTA...........  Raphanus sativus cv GSK3-1
FD560843       --> CCATTTGAA-CATTGAAATGAATAATAATGCTACTACAaa.......  Raphanus sativus var. oleiformis
EV527093       --> CCATTTGAAACATTGAAATGAATAATAATGCTACTACATGTTTTGTT  Raphanus raphanistrum subsp. maritimus