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Alignment for radish unigene UN09094

               1      -     51
UN09094        --> CCGTTTAATTTATTTTATCATTATAATTTTGAAAGACTTTTTCTCATATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY906746       <-- CCGTTTAATTTATTTTATCATTATAATTTTGAAAGACTTTTTCTCATATC
EV569045       <-- ................ATCATTATAATTTTGAAAGACTTTTTCTCATATC
EX903098       <-- ......................ATAATTTTGAAAGACTTTTTCTCATATC
EW723703       <-- ........................AATTTTGAAAGACTTTTTCTCATATC
EY899132       <-- ..................................................
FD550141       <-- ..................................................
FD962523       <-- ..................................................
EX773893       <-- ..................................................
EY932830       <-- ..................................................
EW733208       <-- ..................................................
EW722789       <-- ..................................................
EX895265       <-- ..................................................
EX902884       <-- ..................................................
EY915089       <-- ..................................................
FD576764       <-- ..................................................
FD557755       <-- ..................................................
EY902833       --> CCGTTTAATTTATTTTATCATTATAATTTTGAAAGACTTTTTCTCATATC
EV573645       --> ................ATCATTATAATTTTGAAAGACTTTTTCTCATATC
EY894983       --> ..................................................
FD546118       --> ..................................................
FD959062       --> ..................................................
EW737843       --> ..................................................
EW727530       --> ..................................................
EX899428       --> ..................................................
EX907044       --> ..................................................
EY911008       --> ..................................................
FD581191       --> ..................................................
FD546979       --> ..................................................
FD553791       --> ..................................................

               51     -    101
UN09094        --> TTCAATGTTGATATTCTTATTTATACATGTTTCTTGATTACTTAATTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY906746       <-- TTCAATGTTGATATTCTTATTTATACATGTTTCTTGATTACTTGATTGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV569045       <-- TTTAATGTTGATATTCTTATTTATACATGTTTCTTGATTACTTAATTGAT  Raphanus raphanistrum subsp. landra
EX903098       <-- TTCAATGTTGATATTCTTATTTATACATGTTTCTTGATTACTTAATTGAT  Raphanus sativus cv Rat-Tail Radish #3870
EW723703       <-- TTTAATGTTTATATTCTTATTTATACATGTTTCTTGATTACTTAATTGAT  Raphanus sativus cv Early Scarlet Globe
EY899132       <-- ..CAATGTTGATATTCTTATTTATACATGTTTCTTGATTACTTGATTGAT  Raphanus raphanistrum subsp. maritimus
FD550141       <-- ..CAATGTTGATATTCTTATTTATACATGTTTCTTGATTACTTGATTGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD962523       <-- ..CAATGTTGATATTCTTATTTATACATGTTTCTTGATTACTTGATTGAT  Raphanus raphanistrum subsp. maritimus
EX773893       <-- ...AATGTTGATATTCTTATTTATACATGTTTCTTGATTACTTAATTGAT  Raphanus raphanistrum subsp. landra
EY932830       <-- .....TGTTTATATTCTTATTTATACATGTTTCTTGATTACTTAATTGAT  Raphanus sativus var. oleiformis
EW733208       <-- ..................ATTTATACATGTTTCTTGATTACTTAATTGAT  Raphanus sativus cv Rat-Tail Radish #3870
EW722789       <-- ......................ATACATGTTTCTTGATTACTTAATTGAT  Raphanus sativus cv Early Scarlet Globe
EX895265       <-- ......................ATACATGTTTCTTGATTACTTAATTGAT  Raphanus sativus cv Early Scarlet Globe
EX902884       <-- ......................ATACATGTTTCTTGATTACTTAATTGAT  Raphanus sativus cv Rat-Tail Radish #3870
EY915089       <-- ......................ATACATGTTTCTTGATTGCTTGATTGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD576764       <-- ......................ATACATGTTTCTTGATTACTTAATTGAT  Raphanus sativus cv Rat-Tail Radish #3870
FD557755       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY902833       --> TTCAATGTTGATATTCTTATTTATACATGTTTCTTGATTACTTGATTGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV573645       --> TTTAATGTTGATATTCTTATTTATACATGTTTCTTGATTACTTAATTGAT  Raphanus raphanistrum subsp. landra
EY894983       --> ..CAATGTTGATATTCTTATTTATACATGTTTCTTGATTACTTGATTGAT  Raphanus raphanistrum subsp. maritimus
FD546118       --> ..CAATGTTGATATTCTTATTTATACATGTTTCTTGATTACTTGATTGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD959062       --> ..CAATGTTGATATTCTTATTTATACATGTTTCTTGATTACTTGATTGAT  Raphanus raphanistrum subsp. maritimus
EW737843       --> ..................ATTTATACATGTTTCTTGATTACTTAATTGAT  Raphanus sativus cv Rat-Tail Radish #3870
EW727530       --> ......................ATACATGTTTCTTGATTACTTAATTGAT  Raphanus sativus cv Early Scarlet Globe
EX899428       --> ......................ATACATGTTTCTTGATTACTTAATTGAT  Raphanus sativus cv Early Scarlet Globe
EX907044       --> ......................ATACATGTTTCTTGATTACTTAATTGAT  Raphanus sativus cv Rat-Tail Radish #3870
EY911008       --> ......................ATACATGTTTCTTGATTGCTTGATTGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD581191       --> ......................ATACATGTTTCTTGATTACTTAATTGAT  Raphanus sativus cv Rat-Tail Radish #3870
FD546979       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD553791       --> ..................................................  Raphanus raphanistrum subsp. landra

               101    -    151
UN09094        --> TATAAGATGAATTTATTACACACATCAACATAATAACTATTGATATCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY906746       <-- TGTAAGATGAATTTATTACACACATCAACATAATAACTATTGATATCAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV569045       <-- TATAAGATGAATTTATTACACACATCAACATAATAACTATTGATATCAAG  Raphanus raphanistrum subsp. landra
EX903098       <-- TATAAGATGAATTTATTACACACATCAACATAATAACTATTGATATCAAG  Raphanus sativus cv Rat-Tail Radish #3870
EW723703       <-- TATAAGATGAATTTATTACACACATCAACATAATAACTATTGATATCAAG  Raphanus sativus cv Early Scarlet Globe
EY899132       <-- TGTAAGATGAATTTATTACACACATAAAAATAATAACTATTGATATCAAG  Raphanus raphanistrum subsp. maritimus
FD550141       <-- TGTAAGATGAATTTATTACACACATCAACATAATAACTATTGATATCAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD962523       <-- TGTAAGATGAATTTATTACACACATCAACATAATAACTATTGATATCAAG  Raphanus raphanistrum subsp. maritimus
EX773893       <-- TATAAGATGAATTTATTACACACATCAACATAATAACTATTGATATCAAG  Raphanus raphanistrum subsp. landra
EY932830       <-- TATAAGATGAATTTATTACACACATCAACATAATAACTATTGATATCAAG  Raphanus sativus var. oleiformis
EW733208       <-- TATAAGATGAATTTATTACACACATCAACATAATAACTATTGATATCAAG  Raphanus sativus cv Rat-Tail Radish #3870
EW722789       <-- TATAAGATGAATTTATTACACACATCAACATAATAACTATTGATATCAAG  Raphanus sativus cv Early Scarlet Globe
EX895265       <-- TATAAGATGAATTTATTACACACATCAACATAATAACTATTGATATCAAG  Raphanus sativus cv Early Scarlet Globe
EX902884       <-- TATAAGATGAATTTATTACACACATCAACATAATAACTATTGATATCAAG  Raphanus sativus cv Rat-Tail Radish #3870
EY915089       <-- TGTAAGATGAATTTATTACACACATCAACATAATAACTATTGATATCAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD576764       <-- TATAGGATGAATTTATTACACACATCAACATAATAACTATTGATATCAAG  Raphanus sativus cv Rat-Tail Radish #3870
FD557755       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY902833       --> TGTAAGATGAATTTATTACACACATCAACATAATAACTATTGATATCAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV573645       --> TATAAGATGAATTTATTACACACATCAACATAATAACTATTGATATCAAG  Raphanus raphanistrum subsp. landra
EY894983       --> TGTAAGATGAATTTATTACACACATAAAAATAATAACTATTGATATCAAG  Raphanus raphanistrum subsp. maritimus
FD546118       --> TGTAAGATGAATTTATTACACACATCAACATAATAACTATTGATATCAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD959062       --> TGTAAGATGAATTTATTACACACATCAACATAATAACTATTGATATCAAG  Raphanus raphanistrum subsp. maritimus
EW737843       --> TATAAGATGAATTTATTACACACATCAACATAATAACTATTGATATCAAG  Raphanus sativus cv Rat-Tail Radish #3870
EW727530       --> TATAAGATGAATTTATTACACACATCAACATAATAACTATTGATATCAAG  Raphanus sativus cv Early Scarlet Globe
EX899428       --> TATAAGATGAATTTATTACACACATCAACATAATAACTATTGATATCAAG  Raphanus sativus cv Early Scarlet Globe
EX907044       --> TATAAGATGAATTTATTACACACATCAACATAATAACTATTGATATCAAG  Raphanus sativus cv Rat-Tail Radish #3870
EY911008       --> TGTAAGATGAATTTATTACACACATCAACATAATAACTATTGATATCAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD581191       --> TATAGGATGAATTTATTACACACATCAACATAATAACTATTGATATCAAG  Raphanus sativus cv Rat-Tail Radish #3870
FD546979       --> .........................CAACATAATAACTATTGATATCAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD553791       --> ..................................................  Raphanus raphanistrum subsp. landra

               151    -    201
UN09094        --> TAGTAGTTGTACTGACGAAGAATTTCCATACACTTTCATGGCCTGTGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY906746       <-- TAGTAGTTGTAATGACGAAAAATTTCCATACACTTTCATGGCCTGTGGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV569045       <-- TAGTAGTTGTACTGACTAAGAATTTCCATACACTTTCATGGCCTGTGGAT  Raphanus raphanistrum subsp. landra
EX903098       <-- TAGTAGTTGTACTGACGAAGAATTTCCATACACTTTCATGGCCTGTGGAT  Raphanus sativus cv Rat-Tail Radish #3870
EW723703       <-- TAGTAGTTGTACTGACGAAGAATTTCCATACACTTTCATGGCCTGTGGAT  Raphanus sativus cv Early Scarlet Globe
EY899132       <-- TAGTAGTTGTAATGACGAAAAAATTCCATACACTTTCATGGCCTGTGGAT  Raphanus raphanistrum subsp. maritimus
FD550141       <-- TAGTAGTTGTAATGACGAAAAATTTCCATACACTTTCATGGCCTGTGGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD962523       <-- TAGTAGTTGTAATGACGAAAAATTTCCATACACTTTCATGGCCTGTGGAT  Raphanus raphanistrum subsp. maritimus
EX773893       <-- TAGTAGTTGTACTGACGAAGAATTTCCATACACTTCCATGGCCTGTGGAT  Raphanus raphanistrum subsp. landra
EY932830       <-- TAGTAGTTGTACTGACGAAGAATTTCCATACACTTTCATGGCCTGTGGAT  Raphanus sativus var. oleiformis
EW733208       <-- TAGTAGTTGTACTGACGAAGAATTTCCATACACTTTCATGGCCTGTGGAT  Raphanus sativus cv Rat-Tail Radish #3870
EW722789       <-- TAGTAGTTGTACTGACGAAGAATTTCCATACACTTTCATGGTCTGTGGAT  Raphanus sativus cv Early Scarlet Globe
EX895265       <-- TAGTAGTTGTACTGACGAAGAATTTCCATACACTTTCATGGTCTGTGGAT  Raphanus sativus cv Early Scarlet Globe
EX902884       <-- TAGTAGTTGTACTGACGAAGAATTTCCATACACTTTCATGGCCTGTGGAT  Raphanus sativus cv Rat-Tail Radish #3870
EY915089       <-- TAGTAGTTGTAATGACGAAAAATTTCCATACACTTTCATGGCCTGTGGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD576764       <-- TAGTAGTTGTACTGACGAAGAATTTCCATACACTTTCATGGCCTGTGGAT  Raphanus sativus cv Rat-Tail Radish #3870
FD557755       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY902833       --> TAGTAGTTGTAATGACGAAAAATTTCCATACACTTTCATGGCCTGTGGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV573645       --> TAGTAGTTGTACTGACTAAGAATTTCCATACACTTTCATGGCCTGTGGAT  Raphanus raphanistrum subsp. landra
EY894983       --> TAGTAGTTGTAATGACGAAAAAATTCCATACACTTTCATGGCCTGTGGAT  Raphanus raphanistrum subsp. maritimus
FD546118       --> TAGTAGTTGTAATGACGAAAAATTTCCATACACTTTCATGGCCTGTGGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD959062       --> TAGTAGTTGTAATGACGAAAAATTTCCATACACTTTCATGGCCTGTGGAT  Raphanus raphanistrum subsp. maritimus
EW737843       --> TAGTAGTTGTACTGACGAAAAATTTCCATACACTTTCATGGCCTGTGGAT  Raphanus sativus cv Rat-Tail Radish #3870
EW727530       --> TAGTAGTTGTACTGACGAAGAATTTCCATACACTTTCATGGTCTGTGGAT  Raphanus sativus cv Early Scarlet Globe
EX899428       --> TAGTAGTTGTACTGACGAAGAATTTCCATACACTTTCATGGTCTGTGGAT  Raphanus sativus cv Early Scarlet Globe
EX907044       --> TAGTAGTTGTACTGACGAAGAATTTCCATACACTTTCATGGCCTGTGGAT  Raphanus sativus cv Rat-Tail Radish #3870
EY911008       --> TAGTAGTTGTAATGACGAAAAATTTCCATACACTTTCATGGCCTGTGGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD581191       --> TAGTAGTTGTACTGACGAAAAATTTCCATACACTTTCATGGCCTGTGGAT  Raphanus sativus cv Rat-Tail Radish #3870
FD546979       --> TAGTAGTTGTAATGACGAAAAATTTCCATACACTTTCATGGCCTGTGGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD553791       --> ..................................................  Raphanus raphanistrum subsp. landra

               201    -    251
UN09094        --> TTAGACACCTGAGCATTTGGATCCATCATCGAAATGGTAGCAATAGCAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY906746       <-- TTAGACACCTGAGCATTTGGATCCATCATCGAAATGGTAGCAATAGCAAT
EV569045       <-- TTAGACACCTGAGCATTTGGATCCATCATCGAAATGGTAGCAATAGCAAT
EX903098       <-- TTAGACACCTGAGCATTTGGATCCATCATCGAAATGGTAGCAATAGCAAT
EW723703       <-- TTAGACACCTGAGCATTTGGATCCATCATCGAAATGGTAGCAATAGCAAT
EY899132       <-- TTAGACACCTGAGCATTTGGATCCATCATCGAAATGGTAGCAATAGCAAT
FD550141       <-- TTAGACACCTGAGCATTTGGATCCATCATCGAAATGGTAGCAATAGCAAT
FD962523       <-- TTAGACACCTGAGCATTTGGATCCATCATCGAAATGGTAGCAATAGCAAT
EX773893       <-- TTAGACACCTGAGCATTTGGATCCATCATCGAAATGGTAGCAATAGCAAT
EY932830       <-- TTAGACACCTGAGCATTTGGATCCATCATCGAAATGGTAGCAATAGCAAT
EW733208       <-- TTAGACACCTGAGCATTTGGATCCATCAATGAAATGGTAGCAATAGCAAT
EW722789       <-- TTAGACACCTGAGCATTTGGATCCATCATCGAAATGGTAGCAATAGCAAT
EX895265       <-- TTAGACACCTGAGCATTTGGATCCATCATCGAAATGGTAGCAATAGCAAT
EX902884       <-- TTAGACACCTGAGCATTTGGATCCATCATCGAAATGGTAGCAATAGCAAT
EY915089       <-- TTAGACACCTGAGCATTTGGACCCATCATCGAAATGGTAGCAATAGCAAT
FD576764       <-- TTAGACACCTGAGCATTTGGATCCATCATCGAAATGGTAGCAATAGCAAT
FD557755       <-- ..................................................
EY902833       --> TTAGACACCTGAGCATTTGGATCCATCATCGAAATGGTAGCAATAGCAAT
EV573645       --> TTAGACACCTGAGCATTTGGATCCATCATCGAAATGGTAGCAATAGCAAT
EY894983       --> TTAGACACCTGAGCATTTGGATCCATCATCGAAATGGTAGCAATAGCAAT
FD546118       --> TTAGACACCTGAGCATTTGGATCCATCATCGAAATGGTAGCAATAGCAAT
FD959062       --> TTAGACACCTGAGCATTTGGATCCATCATCGAAATGGTAGCAATAGCAAT
EW737843       --> TTAGACACCTGAGCATTTGGATCCATCAATGAAATGGTAGCAATAGCAAT
EW727530       --> TTAGACACCTGAGCATTTGGATCCATCATCGAAATGGTAGCAATAGCAAT
EX899428       --> TTAGACACCTGAGCATTTGGATCCATCATCGAAATGGTAGCAATAGCAAT
EX907044       --> TTAGACACCTGAGCATTTGGATCCATCATCGAAATGGTAGCAATAGCAAT
EY911008       --> TTAGACACCTGAGCATTTGGACCCATCATCGAAATGGTAGCAATAGCAAT
FD581191       --> TTAGACACCTGAGCATTTGGATCCATCATCGAAATGGTAGCAATAGCAAT
FD546979       --> TTAGACACCTGAGCATTTGGATCCATCATCGAAATGGTAGCAATAGCAAT
FD553791       --> ..................................................

               251    -    301
UN09094        --> CTTTTTTTGTCGTCTTTGGAAGTATTAGACAACTTCCATTGGTTATATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY906746       <-- CTTTTTTTGTCGTCTTTGGAAGTATTAGACAACTTCCATTGGTTATATAT
EV569045       <-- CTTTTTTTGTCGTCTTTGGAAGTATTAGACAACTTCCATTGGTTATATAT
EX903098       <-- CTTTTTT-GTCGTCTTTGGAAGTATTAGACAACTTCCATTGGTTATATAT
EW723703       <-- CTTTTTTTGTCGTCTTTGGAAGTATTAGACAACTTCCATTGGTTATATAT
EY899132       <-- CTTTTTTTGTCGTCTTTGGAAGTATTAGACAACTTCCATTGGTTATATAT
FD550141       <-- CTTTTTTTGTCGTCTTTGGAAGTATTAGACAACTTCCATTGGTTATATAT
FD962523       <-- CTTTTTTTGTCGTCTTTGGAAGTATCAGACAACTTCCATTGGTTATATAT
EX773893       <-- CTTTTTTTGTCGTCTTTGGAAGTATTAGACAACTTCCATTGGTTATATAT
EY932830       <-- CTTTTTTTGTCGTCTTTGGAAGTATTAGACAACTTCCATTGGTTATATAT
EW733208       <-- CTTTTTTTGTCGTCTTTGGAAGTATTAGACAACTTCCATTGGTTATATAT
EW722789       <-- CTTTTTTTGTCGTCTTTGGAAGTATTAGACAACTTCCATTGGTTATATAT
EX895265       <-- CTTTTTTTGTCGTCTTTGGAAGTATTAGACAACTTCCATTGGTTATATAT
EX902884       <-- CTTTTTT-GTCGTCTTTGGAAGTATTAGACAACTTCCATTGGTTATATAT
EY915089       <-- CTTTTTTTGTCGTCTTTGGAAGTGTTAGACAACTTCCATTGGTTATATAT
FD576764       <-- CTTTTTTTGTCGTCTTTGGAAGTATTAGACAACTTCCATTGGTTATATAT
FD557755       <-- ........GTCGTCTTTGGAAGTATTAGACAACTTCCATTGGTTATATAT
EY902833       --> CTTTTTTTGTCGTCTTTGGAAGTATTAGACAACTTCCATTGGTTATATAT
EV573645       --> CTTTTTTTGTCGTCTTTGGAAGTATTAGACAACTTCCATTGGTTATATAT
EY894983       --> CTTTTTTTGTCGTCTTTGGAAGTATTAAACAACTTCCATTGGTTATATAT
FD546118       --> CTTTTTTTGTCGTCTTTGGAAGTATTAGACAACTTCCATTGGTTATATAT
FD959062       --> CTTTTTTTGTCGTCTTTGGAAGTATCAGACAACTTCCATTGGTTATATAT
EW737843       --> CTTTTTTTGTCGTCTTTGGAAGTATTAGACAACTTCCATTGGTTATATAT
EW727530       --> CTTTTTTTGTCGTCTTTGGAAGTATTAGACAACTTCCATTGGTTATATAT
EX899428       --> CTTTTTTTGTCGTCTTTGGAAGTATTAGACAACTTCCATTGGTTATATAT
EX907044       --> CTTTTTT-GTCGTCTTTGGAAGTATTAGACAACTTCCATTGGTTATATAT
EY911008       --> CTTTTTTTGTCGTCTTTGGAAGTGTTAGACAACTTCCATTGGTTATATAT
FD581191       --> CTTTTTTTGTCGTCTTTGGAAGTATTAAACAACTTCCATTGGTTATATAT
FD546979       --> CTTTTTTTGTCGTCTTTGGAAGTATTAGACAACTTCCATTGGATATATAT
FD553791       --> ........GTCGTCTTTGGAAGTATTAAACAACTTCCATTGGTTATATAT

               301    -    351
UN09094        --> TCATGTTTGCAAGACGTTTTGCACAACGCATCACCATTTTTCTTTGTACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY906746       <-- TCATGTTTGCAAGACGTTTTGCACAACGCATCACCATTTTTCTTTGTACA
EV569045       <-- TCATGTTTGCAAGACGTTTTGCACAACGCATCACCATTTTTCTTTGTACA
EX903098       <-- TCATGTTTGCAAGACGTTTTGCACAACGCATCACCATTTTTCTTTGTACA
EW723703       <-- TCATGTTTGCAAGACGTTTTGCACAACGCATCACCATTTTTCTTTGTACA
EY899132       <-- TCATGTTTGCAAGACGTTTTGCACAACGCATCACCATTTTTCTTTGTACA
FD550141       <-- TCATGTTTGTAAGACGTTTTGCACAACGCATCACCATTTTTCTTTGTACA
FD962523       <-- TCATGTTTGCAAGACGTTTTGCACAACGCATCACCATTTTTCTTTGTACA
EX773893       <-- TCATGTTTGCAAGACGTTTTGCACAACGCATCACCATTTTTCTTTGTACA
EY932830       <-- TCATGTTCGCAAGACGTTTTGCACAACGCATCACCATTTTTCTTTGTACA
EW733208       <-- TCATGTTTGCAAGACGTTTTGCACAACGCATCACCATTTTTCTTTGTACA
EW722789       <-- TCATGTTTGCAAGACGTTTTGCACAACGCATCACCATTTTTCTTTGTACA
EX895265       <-- TCATGTTTGCAAGACGTTTTGCACAACGCATCACCATTTTTCTTTGTACA
EX902884       <-- TCATGTTTGCAAGACGTTTTGCACAACGCATCACCATTTTTCTTTGTACA
EY915089       <-- TCATGTTTGCAAGACGTTTTGCACAACGCATCACCATTTTTCTTTGTACA
FD576764       <-- TCATGTTTGCAAGACGTTTTGCACAACGCATCACCATTTTTCTTTGTACA
FD557755       <-- TCATGTTTGCAAGACGTTTTGCACAACGCATCACCATTTTTCTTTGTACA
EY902833       --> TCATGTTTGCAAGACGTTTTGCACAACGCATCACCATTTTTCTTTGTACA
EV573645       --> TCATGTTTGCAAGACGTTTTGCACAACGCATCACCATTTTTCTTTGTACA
EY894983       --> TCATGTTTGCAAGACGTTTTGCACAACGCATCACCATTTTTCTTTGTACA
FD546118       --> TCATGTTTGTAAGACGTTTTGCACAACGCATCACCATTTTTCTTTGTACA
FD959062       --> TCATGTTTGCAAGACGTTTTGCACAACGCATCACCATTTTTCTTTGTACA
EW737843       --> TCATGTTTGCAAGACGTTTTGCACAACGCATCACCATTTTTCTTTGTACA
EW727530       --> TCATGTTTGCAAGACGTTTTGCACAACGCATCACCATTTTTCTTTGTACA
EX899428       --> TCATGTTTGCAAGACGTTTTGCACAACGCATCACCATTTTTCTTTGTACA
EX907044       --> TCATGTTTGCAAGACGTTTTGCACAACGCATCACCATTTTTCTTTGTACA
EY911008       --> TCATGTTTGCAAGACGTTTTGCACAACGCATCACCATTTTTCTTTGTACA
FD581191       --> TCATGTTTGCAAGACGTTTTGCACAACGCATCACCATTTTTCTTTGTACA
FD546979       --> TCATGTTTGCAAGACGTTTTGCACAACGCATCACCATTTTTCTTTGTACA
FD553791       --> TCATGTTTGCAAGACGTTTTGCACAACGCATCACCATTTTTCTTTGTACA

               351    -    401
UN09094        --> AGTGTCATGTGAGGCCAATTTGCTTCGTGTTTTCTTACAATAATGATTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY906746       <-- AGTGTCATGTGAGGCCAATTTGCTTCGTGTTTTCTTACAATAATGATTAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV569045       <-- AGTGTCATGTGAGGCCAATTTGCTTCGTGTTTTCTTACAATAATGATTCG  Raphanus raphanistrum subsp. landra
EX903098       <-- AGTGTCATGTGAGGCCAATTTGCTTCGTGTTTTCTTACAATAATGATTCG  Raphanus sativus cv Rat-Tail Radish #3870
EW723703       <-- AGTGTCATGTGAGGCCAATTTGCTTCGTGTTTTCTTACAATAATGATTCG  Raphanus sativus cv Early Scarlet Globe
EY899132       <-- AGTGTCATGTGAGGCCAATTTGCTTCGTGTTTTCTTACAATAATGATTAG  Raphanus raphanistrum subsp. maritimus
FD550141       <-- AGTGTCATGTGAGGCCAATTTGCTTCGTGTTTTCTTACAATAATGATTAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD962523       <-- AGTGTCATGTGAGGCCAATTTGCTTCGTGTTTTCTTACAATAATGATTAG  Raphanus raphanistrum subsp. maritimus
EX773893       <-- AGTGTCATGTGAGGCCAATTTGCTTCGTGTTTTCTTACAATAATGATTCG  Raphanus raphanistrum subsp. landra
EY932830       <-- AGTGTCATGTGAGGCCAATTTGCTTCGTGTTTTCTTACAATAATGATTCG  Raphanus sativus var. oleiformis
EW733208       <-- AGTGTCATGTGAGGCCAATTTGCTTCGTGTTTTCTTACAATAATGATTCG  Raphanus sativus cv Rat-Tail Radish #3870
EW722789       <-- AGTGTCATGTGAGGCCAATTTGCTTCGTGTTTTCTTACAATAATGATTCG  Raphanus sativus cv Early Scarlet Globe
EX895265       <-- AGTGTCATGTGAGGCCAATTTGCTTCGTGTTTTCTTACAATAATGATTCG  Raphanus sativus cv Early Scarlet Globe
EX902884       <-- AGTGTCATGTGAGGCCAATTTGCTTCGTGTTTTCTTACAATAATGATTCG  Raphanus sativus cv Rat-Tail Radish #3870
EY915089       <-- AGTGTCATGTGAGGCCAATTTGCTTCGTGTTTTCTTACAATAATGATTAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD576764       <-- AGTGTCATGTGAGGCCAATTTGCTTCGTGTTTTCTTACAATAATGATTCG  Raphanus sativus cv Rat-Tail Radish #3870
FD557755       <-- AGTGTCATGTGAGGCCAATTTGCTTCGTGTTTTCTTACAATAATGATTCG  Raphanus raphanistrum subsp. landra
EY902833       --> AGTGTCATGTGAGGCCAATTTGCTTCGTGTTTTCTTACAATAATGATTAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV573645       --> AGTGTCATGTGAGGCCAATTTGCTTCGTGTTTTCTTACAATAATGATTCG  Raphanus raphanistrum subsp. landra
EY894983       --> AGTGTCATGTGAGGCCAATTTGCTTCGTGTTTTCTTACAATAATGATTAA  Raphanus raphanistrum subsp. maritimus
FD546118       --> AGTGTCATGTGAGGCCAATTTGCTTCGTGTTTTCTTACAATAATGATTAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD959062       --> AGTGTCATGTGAGGCCAATTTGCTTCGTGTTTTCTTACAATAATGATTAG  Raphanus raphanistrum subsp. maritimus
EW737843       --> AGTGTCATGTGAGGCCAATTTGCTTCGTGTTTTCTTACAATAATGATTCG  Raphanus sativus cv Rat-Tail Radish #3870
EW727530       --> AGTGTCATGTGAGGCCAATTTGCTTCGTGTTTTCTTACAATAATGATTCG  Raphanus sativus cv Early Scarlet Globe
EX899428       --> AGTGTCATGTGAGGCCAATTTGCTTCGTGTTTTCTTACAATAATGATTCG  Raphanus sativus cv Early Scarlet Globe
EX907044       --> AGTGTCATGTGAGGCCAATTTGCTTCGTGTTTTCTTACAATAATGATTCG  Raphanus sativus cv Rat-Tail Radish #3870
EY911008       --> AGTGTCATGTGAGGCCAATTTGCTTCGTGTTTTCTTACAATAATGATTAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD581191       --> AGTGTCATGTGAGGCCAATTTGCTTCGTGTTTTCTTACAATAATGATTCG  Raphanus sativus cv Rat-Tail Radish #3870
FD546979       --> AGTGTCATGTGAGGCCAATTTGCTTCGTGTTTTCTTACAATAATGATTAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD553791       --> AGTGTCATGTGAGGCCAATTTGCTTCGTGTTTTCTTACAATAATGATTCG  Raphanus raphanistrum subsp. landra

               401    -    451
UN09094        --> ATGTTTGAGCATGTCCATTTTCTATTCCTGTTGAAACCAACAAAAATAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY906746       <-- ATGTTTGAGCATGTCCATTTTCTATTCCTGTTGAAACCAACAAAAATAGC
EV569045       <-- ATGTTTGAGCATGTCCATTTTCTATTCCTGTTGAAACCAACAAAAATAGC
EX903098       <-- ATGTTTGAGCATGTCCATTTTCTATTCCTGTTGAAACCAACAAAAATAGC
EW723703       <-- ATGTTTGAGCATGTCCATTTTCTATTCCTGTTGAAACCAA..........
EY899132       <-- ATGTTTGAGCATGTCCATTTTCTATTCCTGTTGAAACCAACAAAAATAGC
FD550141       <-- ATGTTTGAGCATGTCCATTTTCTATTCCTGTTGAAACCAACAAAAATAGC
FD962523       <-- ATGTTTGAGCATGTCCATTTTCTATTCCTGTTGAAACCAACAAAAATAGC
EX773893       <-- ATGTTTGAGCATGTCCATTTTCTATTCCTGTTGAAACCAACAAAAATAGC
EY932830       <-- ATGTTTGAGCATGTCCATTTTCTATTCCTGTTGAAGCCAACAAAAATAGC
EW733208       <-- ATGTTTGAGCATGTCCATTTTCTATTCCTGTTGAAACCAACAAAAATAGC
EW722789       <-- ATGTTTGAGCATGTCCATTTTCTATTCCTGTTGAAACCAACAAAAATAGC
EX895265       <-- ATGTTTGAGCATGTCCATTTTCTATTCCTGTTGAAACCAACAAAAATAGC
EX902884       <-- ATGTTTGAGCATGTCCATTTTCTATTCCTGTTGAAACCAACAAAAATAGC
EY915089       <-- ATGTTTGAGCATGTCCATTTTCTATTCCTGTTGAAACCAACAAAAATAGC
FD576764       <-- ATGTTTGAGCATGTCCATTTTCTATTCCTGTTGAAACCAACAAAAATAGC
FD557755       <-- ATGTTTGAGCATGTCCATTTTCTATTCCTGTTGAAACCAACAAAAATAGC
EY902833       --> ATGTTTGAGCATGTCCATTTTCTATTCCTGTTGAAACCAACAAAAATAGC
EV573645       --> ATGTTTGAGCATGTCCATTTTCTATTCCTGTTGAAACCAACAAAAATAGC
EY894983       --> ATGTTTGAGCATGTCCATTTTCTATTCCTGTTGAAACCAACAAAAATAGC
FD546118       --> ATGTTTGAGCATGTCCATTTTCTATTCCTGTTGAAACCAACAAAAATAGC
FD959062       --> ATGTTTGAGCATGTCCATTTTCTATTCCTGTTGAAACCAACAAAAATAGC
EW737843       --> ATGTTTGAGCATGTCCATTTTCTATTCCTGTTGAAACCAACAAAAATAGC
EW727530       --> ATGTTTGAGCATGTCCATTTTCTATTCCTGTTGAAACCAACAAAAATAGC
EX899428       --> ATGTTTGAGCATGTCCATTTTCTATTCCTGTTGAAACCAACAAAAATAGC
EX907044       --> ATGTTTGAGCATGTCCATTTTCTATTCCTGTTGAAACCAACAAAAATAGC
EY911008       --> ATGTTTGAGCATGTCCATTTTCTATTCCTGTTGAAACCAACAAAAATAGC
FD581191       --> ATGTTTGAGCATGTCCATTTTCTATTCCTGTTGAAACCAACAAAAATAGC
FD546979       --> ATGTTTGAGCATGTCCATTTTCTATTCCTGTTGAAACCAACAAAAATAGC
FD553791       --> ATGTTTGAGCATGTCCATTTTCTATTCCTGTTGAAACCAACAAAAATAGC

               451    -    501
UN09094        --> ATCACAATAACGGCAAACATAATAACATTTGAACTGATGGTCATTTGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY906746       <-- ATCACAATAACAGCAAACATAATACCATTTGAACTGATGGTCATTTGTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV569045       <-- ATCACAATAACGGCAAACATAATAACATTTGAACTGATGGCCATTTGTTT  Raphanus raphanistrum subsp. landra
EX903098       <-- ATCACAATAACGGCAAACATAATAACATTTGAACTGATGGTCATTTGTTT  Raphanus sativus cv Rat-Tail Radish #3870
EW723703       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY899132       <-- ATCACAATAACGGCAAACATAATACCATTTGAACTGATGGTCATTTGTTT  Raphanus raphanistrum subsp. maritimus
FD550141       <-- ATCACAATAACAGCAAACATAATACCATTTGAACTGATGGTCATTTGTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD962523       <-- ATCACAATAACAGCAAACATAATACCATTTGAACTGATGGTCATTTGTTT  Raphanus raphanistrum subsp. maritimus
EX773893       <-- ATCACAATAACGGCAAACATAATAACATTTGAACTGATGGCCATTTGTTT  Raphanus raphanistrum subsp. landra
EY932830       <-- ATCACAATAACGGCAAACATAATAACATTTGAACTGATGGCCATTTGTTT  Raphanus sativus var. oleiformis
EW733208       <-- ATCACAATAACGGCAAACATAATAACATTTGAACTGATGGCCATTTGTTT  Raphanus sativus cv Rat-Tail Radish #3870
EW722789       <-- ATCACAATAACGGCAAACATAATAACATTTGAACTGATGGCCATTTGTTT  Raphanus sativus cv Early Scarlet Globe
EX895265       <-- ATCACAATAACGGCAAACATAATAACATTTGAACTGATGGCCATTTGTTT  Raphanus sativus cv Early Scarlet Globe
EX902884       <-- ATCACAATAACGGCAAACATAATAACATTTGAACTGATGGTCATTTGTTT  Raphanus sativus cv Rat-Tail Radish #3870
EY915089       <-- ATCACAATAACAGCAAACATAATACCATTTGAACTGATGGTCATTTGTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD576764       <-- ATCACAATAACAGCAAACATAATAACATTTGAACTGATGGCCATTTGTTT  Raphanus sativus cv Rat-Tail Radish #3870
FD557755       <-- ATCACAATAACGGCAAACATAATAACATTTGAACTGATGGCCATTTGTTT  Raphanus raphanistrum subsp. landra
EY902833       --> ATCACAATAACAGCAAACATAATACCATTTGAACTGATGGTCATTTGTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV573645       --> ATCACAATAACGGCAAACATAATAACATTTGAACTGATGGCCATTTGTTT  Raphanus raphanistrum subsp. landra
EY894983       --> ATCACAATAACGGCAAACATAATACCATTTGAACTGATGGTCATTTGTTT  Raphanus raphanistrum subsp. maritimus
FD546118       --> ATCACAATAACAGCAAACATAATACCATTTGAACTGATGGTCATTTGTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD959062       --> ATCACAATAACAGCAAACATAATACCATTTGAACTGATGGTCATTTGTTT  Raphanus raphanistrum subsp. maritimus
EW737843       --> ATCACAATAACGGCAAACATAATAACATTTGAACTGATGGCCATTTGTTT  Raphanus sativus cv Rat-Tail Radish #3870
EW727530       --> ATCACAATAACGGCAAACATAATAACATTTGAACTGATGGCCATTTGTTT  Raphanus sativus cv Early Scarlet Globe
EX899428       --> ATCACAATAACGGCAAACATAATAACATTTGAACTGATGGCCATTTGTTT  Raphanus sativus cv Early Scarlet Globe
EX907044       --> ATCACAATAACGGCAAACATAATAACATTTGAACTGATGGTCATTTGTTT  Raphanus sativus cv Rat-Tail Radish #3870
EY911008       --> ATCACAATAACAGCAAACATAATACCATTTGAACTGATGGTCATTTGTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD581191       --> ATCACAATAACAGCAAACATAATAACATTTGAACTGATGGCCATTTGTTT  Raphanus sativus cv Rat-Tail Radish #3870
FD546979       --> ATCACAATAACAGCAAACATAATACCATTTGAACTGATGGTCATTTGTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD553791       --> ATCACAATAACGGCAAACATAATAACATTTGAACTGATGGCCATTTGTTT  Raphanus raphanistrum subsp. landra

               501    -    551
UN09094        --> CTTTTTATTTTCTTGTTATTTTCGTGTTTTAAATTAGCATGGAATGCC..
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY906746       <-- CTTTTTGTTTTCTTGTTATTTTCGTGTTTTAAATTAGCATGGAATGattc  Raphanus raphanistrum subsp. raphanistrum (MS)
EV569045       <-- CTTTTTATTTTCTTGTTATTTTCGTGTTTTAAATTAGCATGGAATGattc  Raphanus raphanistrum subsp. landra
EX903098       <-- CTTTTTATTTTCTTGTTATTTTCGTGTTTTAAATTAGCATGGAATcc...  Raphanus sativus cv Rat-Tail Radish #3870
EW723703       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY899132       <-- CTTTTTGTTTTCTTGTTATTTTCGTGTTTTAAATTAGCATcc........  Raphanus raphanistrum subsp. maritimus
FD550141       <-- CTTTTTGTTTTCTTGTTATTTTCGTGTTTTAAATTAGCATGGAATGattc  Raphanus raphanistrum subsp. raphanistrum (NY)
FD962523       <-- CTTTTTGTTTTCTTGTTATTT--TTGTTTTAAATTAGCATGGAATcc...  Raphanus raphanistrum subsp. maritimus
EX773893       <-- CTTTTTATTTTCTTGTTATTTTCGTGTTTTAAATTAGCATGGAATGattc  Raphanus raphanistrum subsp. landra
EY932830       <-- CTTTTTATTTTCTTGTTATTTTCGTGTTTTAAATTAGCATcc........  Raphanus sativus var. oleiformis
EW733208       <-- CTTTTTATTTTCTTGTTATTTTCGTGTTTTAAATTA..............  Raphanus sativus cv Rat-Tail Radish #3870
EW722789       <-- CTTTTTATTTTCTTGTTATTTTCGTGTTTTAAATTAGCATcc........  Raphanus sativus cv Early Scarlet Globe
EX895265       <-- CTTTTTATTTTCTTGTTATTTTCGTGTTTTAAATTAGCATcc........  Raphanus sativus cv Early Scarlet Globe
EX902884       <-- CTTTTTATTTTCTTGTTATTTTCGTGTTTTAAATTAGCATGGAATcc...  Raphanus sativus cv Rat-Tail Radish #3870
EY915089       <-- CTTTTTGTTT-CTTGTTATTTTCGTGTTTTAAATTAGCATGGAATGattc  Raphanus raphanistrum subsp. raphanistrum (NY)
FD576764       <-- CTTTTTATTTTCTTGTTATTTTCGTGTTTTAAATTAGCATGGAATcc...  Raphanus sativus cv Rat-Tail Radish #3870
FD557755       <-- CTTTTTATTTTCTTGTTATTTTCGTGTTTTAAATTAGCATGGAATGatta  Raphanus raphanistrum subsp. landra
EY902833       --> CTTTTTGTTTTCTTGTTATTTTCGTGTTTTAAATTAGCATGGAATGattc  Raphanus raphanistrum subsp. raphanistrum (MS)
EV573645       --> CTTTTTATTTTCTTGTTATTTTCGTGTTTTAAATTAGCATGGAATGattc  Raphanus raphanistrum subsp. landra
EY894983       --> CTTTTTGTTTTCTTGTTATTTTCGTGTTTTAAATTAGCATcc........  Raphanus raphanistrum subsp. maritimus
FD546118       --> CTTTTTGTTTTCTTGTTATTTTCGTGTTTTAAATTAGCATGGAATGattc  Raphanus raphanistrum subsp. raphanistrum (NY)
FD959062       --> CTTTTTGTTTTCTTGTTATTTT--TGTTTTAAATTAGCATGGAATcc...  Raphanus raphanistrum subsp. maritimus
EW737843       --> CTTTTTATTTTCTTGTTATTTTCGTGTTTTAAATTAGCATGGAATGCC..  Raphanus sativus cv Rat-Tail Radish #3870
EW727530       --> CTTTTTATTTTCTTGTTATTTTCGTGTTTTAAATTAGCATcc........  Raphanus sativus cv Early Scarlet Globe
EX899428       --> CTTTTTATTTTCTTGTTATTTTCGTGTTTTAAATTAGCATcc........  Raphanus sativus cv Early Scarlet Globe
EX907044       --> CTTTTTATTTTCTTGTTATTTTCGTGTTTTAAATTAGCATGGAATcc...  Raphanus sativus cv Rat-Tail Radish #3870
EY911008       --> CTTTTTGTTT-CTTGTTATTTTCGTGTTTTAAATTAGCATGGAATGattc  Raphanus raphanistrum subsp. raphanistrum (NY)
FD581191       --> CTTTTTATTTTCTTGTTATTTTCGTGTTTTAAATTAGCATGGAATcc...  Raphanus sativus cv Rat-Tail Radish #3870
FD546979       --> CTTTTTGTTTTCTTGTTATTTTCGTGTTTTAAATTAGCATGGAATGattc  Raphanus raphanistrum subsp. raphanistrum (NY)
FD553791       --> CTTTTTATTTTCTTGTTATTTTCGTGTTTTAAATTAACATGGAATGatta  Raphanus raphanistrum subsp. landra

               551    -    601
UN09094        --> ...
                   ~~~
EY906746       <-- c..
EV569045       <-- c..
EX903098       <-- ...
EW723703       <-- ...
EY899132       <-- ...
FD550141       <-- c..
FD962523       <-- ...
EX773893       <-- c..
EY932830       <-- ...
EW733208       <-- ...
EW722789       <-- ...
EX895265       <-- ...
EX902884       <-- ...
EY915089       <-- c..
FD576764       <-- ...
FD557755       <-- tcc
EY902833       --> c..
EV573645       --> c..
EY894983       --> ...
FD546118       --> c..
FD959062       --> ...
EW737843       --> ...
EW727530       --> ...
EX899428       --> ...
EX907044       --> ...
EY911008       --> c..
FD581191       --> ...
FD546979       --> c..
FD553791       --> tcc