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Alignment for radish unigene UN09126

               1      -     51
UN09126        --> GGAAAACTAACAGAATCCTCGGCGACAAAGAGTAGAGTAGTAGAGAGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439524       <-- ..................................................
FY445541       <-- ..................................................
EV529425       <-- ..................................................
EY918786       <-- ..................................................
EV524425       --> GGAAAACTAACAGAATCCTCGGCGACAAAGAGTAGAGTAG-AGAGAGAGA
FY448797       --> .......................................GTAGAGAGAGA
FY452560       --> .............................................AGAGA
FY443489       --> ..................................................
EY922912       --> ..................................................
FD941238       --> ..................................................

               51     -    101
UN09126        --> GAGAGCACTACAAAGGCTTCGTTCCTTCCGCCGGAGATGGACAACGACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439524       <-- ..................................................
FY445541       <-- ..................................................
EV529425       <-- ..................................................
EY918786       <-- ..................................................
EV524425       --> GAGAGCACTACAAAGGCTTCGTTCCTTCCGCCGGAGATGGACAACGACTC
FY448797       --> GAGAGCACTACAAAGGCTTCGTTCCTTCCGCCGGAGATGGACAACGACTC
FY452560       --> GAGAGC-CT-CAAAGGCTTCGTTCCTTCCGCCGGAGATGGACAACGACTC
FY443489       --> ..................................................
EY922912       --> ..................................................
FD941238       --> ..................................................

               101    -    151
UN09126        --> AGTGGCGTCATCGCCGAGATCAGAGTACGATAACCAGCCACGTGTACGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439524       <-- ..................................................
FY445541       <-- ..................................................
EV529425       <-- ..................................................
EY918786       <-- ..................................................
EV524425       --> AGTGGCGTCATCGCCGAGATCAGAGTACGATAACCAGCCACGTGTACGGT
FY448797       --> AGTGGCGTCATCGCCGAGATCAGAGTACGATAACCAGCCACGTGTACGGT
FY452560       --> AGTGGCGTCATCGCCGAGATCAGAGTACGATAACCAGCCACGTGTACGGT
FY443489       --> ..................................................
EY922912       --> ..................................................
FD941238       --> ..................................................

               151    -    201
UN09126        --> TCATGTGCACTTTCGGAGGAAGGATCTTGCCTCGTCCGCCGGATAACCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439524       <-- ..................................................
FY445541       <-- ..................................................
EV529425       <-- ..................................................
EY918786       <-- ..................................................
EV524425       --> TCATGTGCACTTTCGGAGGAAGGATCTTGCCTCGTCCGCCGGATAACCAG
FY448797       --> TCATGTGCACTTTCGGAGGAAGGATCTTGCCTCGTCCGCCGGATAACCAG
FY452560       --> TCATGTGCACTTTCGGAGGAAGGATCTTGCCTCGTCCGCCGGATAACCAG
FY443489       --> ..................................................
EY922912       --> ..................................................
FD941238       --> ..................................................

               201    -    251
UN09126        --> CTCTGTTACGTCGGCGGTGACAATCGTATGGTCGCCGTTCATCGTCACAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439524       <-- ..................................................
FY445541       <-- ..................................................
EV529425       <-- ..................................................
EY918786       <-- ..................................................
EV524425       --> CTCTGTTACGTCGGCGGTGACAATCGTATGGTCGCCGTTCATCGTCACAC
FY448797       --> CTCTGTTACGTCGGCGGTGACAATCGTATGGTCGCCGTTCATCGTCACAC
FY452560       --> CTCTGTTACGTCGGCGGTGACAATCGTATGGTCGCCGTTCATCGTCACAC
FY443489       --> ..................................................
EY922912       --> ..................................................
FD941238       --> ..................................................

               251    -    301
UN09126        --> ATCTTTCGCCTCTCTCCTCAGTAAACTTGCTAAACTCTCCGGTAAAAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439524       <-- ..................................................
FY445541       <-- ..................................................
EV529425       <-- ..................................................
EY918786       <-- ..................................................
EV524425       --> ATCTTTCGCCTCTCTCCTCAGTAAACTTGCTAAACTCTCCGGTAAAAGCA
FY448797       --> ATCTTTCGCCTCTCTCCTCAGTAAACTTGCTAAACTCTCCGGTAAAAGCA
FY452560       --> ATCTTTCGCCTCTCTCCTCAGTAAACTTGCTAAACTCTCCGGTAAAAGCA
FY443489       --> ..................................................
EY922912       --> ..................................................
FD941238       --> ..................................................

               301    -    351
UN09126        --> ACATGCGCGTGAAGTACCAGCTACCAAACGAGGATCTTGACGCGTTGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439524       <-- ..................................................
FY445541       <-- ..................................................
EV529425       <-- ..................................................
EY918786       <-- ..................................................
EV524425       --> ACATGAGCGTGAAGTACCAGCTACCAAACGAGGATCTTGACGCGTTGATC
FY448797       --> ACATGCGCGTGAAGTACCAGCTACCAAACGAGGATCTTGACGCGTTGATC
FY452560       --> ACATGCGCGTGAAGTACCAGCTACCAAACGAGGATCTTGACGCGTTGATC
FY443489       --> ..................................................
EY922912       --> ..................................................
FD941238       --> ..................................................

               351    -    401
UN09126        --> TCCGTATCAACGGACGAGGATGTAGAGAACATGATGGAAGAATACGACCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439524       <-- ..................................................
FY445541       <-- ..................................................
EV529425       <-- ..................................................
EY918786       <-- ..................................................
EV524425       --> TCCGTATCAACGGACGAGGATGTAGAGAACATGATGGAAGAATACGACCG
FY448797       --> TCCGTATCAACGGACGAGGATGTAGAGAACATGATGGAAGAATACGACCG
FY452560       --> TCCGTATCAACGGACGAGGATGTAGAGAACATGATGGAAGAATACGACCG
FY443489       --> ..................................................
EY922912       --> ..................................................
FD941238       --> ..................................................

               401    -    451
UN09126        --> CGTCGCACTGAATCAAAACCCCCGCTCTTCTCGTCTCCGTCTCTTCCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439524       <-- ..................................................
FY445541       <-- ..................................................
EV529425       <-- ..................................................
EY918786       <-- ..................................................
EV524425       --> CGTCGCACTGAATCAAAACCCCCGCTCCTCTCGTCTCCGTCTCTTCCTCT
FY448797       --> CGTCGCACTGAATCAAAACCCCCGCTCTTCTCGTCTCCGTCTCTTCCTCT
FY452560       --> CGTCGCACTGAATCAAAACCCCCGCTCTTCTCGTCTCCGTCTCTTCCTCT
FY443489       --> ..................................................
EY922912       --> ..................................................
FD941238       --> ..................................................

               451    -    501
UN09126        --> TCGCCAAAAACATCGCCGGAGAAGAAGAAGATAACGATAGTCGAGCAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439524       <-- ..................................................
FY445541       <-- ..................................................
EV529425       <-- ..................................................
EY918786       <-- ..................................................
EV524425       --> TCGCAAAAAACGTCGCCGGAGAAGAAGAAGATAACGATAGTCGAGCAAGC
FY448797       --> TCGCCAAAAACATCGCCGGAGAAGAAGAAGATAACGATAGTCGAGCAAGC
FY452560       --> TCGCCAAAAACATCGCCGGAGAAGAAGAAGATAACGATAGTCGAGCAAGC
FY443489       --> ..................................................
EY922912       --> ..................................................
FD941238       --> ..................................................

               501    -    551
UN09126        --> AGCATCAGCTCTCTCCTCGATAGCTCCGTCAATCGAGAGCAGTGGTTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439524       <-- ..................................................
FY445541       <-- ..................................................
EV529425       <-- ..................................................
EY918786       <-- ..................................................
EV524425       --> AGCATCAGCTCTCTCCTCGATAGCTCCGTCAATCGAGAGCAATGGTTCCT
FY448797       --> AGCATCAGCTCTCTCCTCGATAGCTCCGTCAATCGAGAGCAGTGGTTCCT
FY452560       --> AGCATCAGCTCTCTCCTCGATAGCTCCGTCAATCGAGAGCAGTGGTTCCT
FY443489       --> ..................................................
EY922912       --> ..................................................
FD941238       --> ..................................................

               551    -    601
UN09126        --> CGAAGCTCTCAATCACGGCTCCTCCGCCGCATCTAACGGTGGTTCCAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439524       <-- ..................................................
FY445541       <-- ..................................................
EV529425       <-- ..................................................
EY918786       <-- ..................................................
EV524425       --> CGACGCTCTCAATCACGGCTCCTCCGCCGCATCTAACGGTGGTTCCGGCA
FY448797       --> CGAAGCTCTCAATCACGGCTCCTCCGCCGCATCTAACGGTGGTTCCAGCA
FY452560       --> CGAAGCTCTCAATCACGGCTCCTCCGCCGCATCTAACGGTGGTTCCAGCA
FY443489       --> ..................................................
EY922912       --> ..................................................
FD941238       --> ..................................................

               601    -    651
UN09126        --> AAGGTTTCGAGCGCGTCAGGTCTGAAGTCTCCTCGATCGTCTCCGAAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439524       <-- ..................................................
FY445541       <-- ..................................................
EV529425       <-- ..................................................
EY918786       <-- ..................................................
EV524425       --> AAGGTTTCGAGCGCGTCAGGTCTGAAGTCTCCTCGATCGTCTCCGAAGTT
FY448797       --> AAGGTTTCGAGCGCGTCAGGTCTGAAGTCTCCTCGATCGTCTCCGAAGTT
FY452560       --> AAGGTTTCGAGCGCGTCAGGTCTGAAGTCTCCTCGATCGTCTCCGAAGTT
FY443489       --> ..................................................
EY922912       --> ..................................................
FD941238       --> ..................................................

               651    -    701
UN09126        --> CCTGATTACCTCTTCGGGTTGGATCATTTCGACGAGACTGCTCCGCCGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439524       <-- ........................CATTTCGACGAGACTGCTCCGCCGAA
FY445541       <-- ..................................................
EV529425       <-- ..................................................
EY918786       <-- ..................................................
EV524425       --> CC................................................
FY448797       --> CCTGATTACCTCTTCGGGTTGGATCATTTCGACGAGACTGCTCCGCCGAA
FY452560       --> CCTGATTACCTCTTCGGGTTGGATCATTTCGACGAGACTGCTCCGCCGAA
FY443489       --> ..................................................
EY922912       --> ..................................................
FD941238       --> ..................................................

               701    -    751
UN09126        --> CGACCGTGATCCGAGAGCTAAGATCCGACGAGAAGCCTCGACGCTTTCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439524       <-- CGACCGTGATCCGAGAGCTAAGATCCGACGAGAAGCCTCGACGCTTTCGG
FY445541       <-- ........................................ACGCTTTCGG
EV529425       <-- ..................................................
EY918786       <-- ..................................................
EV524425       --> ..................................................
FY448797       --> CGACCGTGATCCGAGAGCTAAGATCCGACGAGAAGCCTCGACGCTTT...
FY452560       --> CGACCGTGATCCGAGAGCTAAGATCCGACGAGAAGCCTCGACGCTTTCGG
FY443489       --> ..................................................
EY922912       --> ..................................................
FD941238       --> ..................................................

               751    -    801
UN09126        --> ATCCTGGCTCGCCTCGTCGTGATGTTCCTTCGCCGTATGGTTCAACCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439524       <-- ATCCTGGCTCGCCTCGTCGTGATGTTCCTTCGCCGTATGGTTCAACCTCT
FY445541       <-- ATCCTGGCTCGCCTCGTCGTGATGTTCCTTCGCCGTATGGTTCAACCTCT
EV529425       <-- ..................................................
EY918786       <-- ..................................................
EV524425       --> ..................................................
FY448797       --> ..................................................
FY452560       --> ATCCTGGCTCGCCTCGTCGTGATGTTCCTTCGCCGTATGGTTCAACCTCT
FY443489       --> ..................................................
EY922912       --> ..................................................
FD941238       --> ..................................................

               801    -    851
UN09126        --> TCGGCTCATGTGATCACGTCATCTACACCGGAACTTCCACCGGTTAAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439524       <-- TCGGCTCATGTGATCACGTCATCTACACCGGAACTTCCACCGGTTAAAAT
FY445541       <-- TCGGCTCATGTGATCACGTCATCTACACCGGAACTTCCACCGGTTAAAAT
EV529425       <-- ...........................CCGGAACTTCCACCGGTTAAAAT
EY918786       <-- ..................................................
EV524425       --> ..................................................
FY448797       --> ..................................................
FY452560       --> TCGGCTCATGTGATCACGTCATCTACACCGGAACTTCCACCGGTTAAAAT
FY443489       --> ...............................................AAT
EY922912       --> ..................................................
FD941238       --> ..................................................

               851    -    901
UN09126        --> TAAACCGGAAAGTCCAGAAACGGTTTTGACTCCAAAAGCCGATCCTCAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439524       <-- TAAACCGGAAAGTCCAGAAACGGTTTTGACTCCAAAAGCCGATCCTCAAC
FY445541       <-- TAAACCGGAAAGTCCAGAAACGGTTTTGACTCCAAAAGCCGATCCTCAAC
EV529425       <-- TAAACCGGAAAGTCCAGAAACGGTTTTGACTCCAAAAGCCGATCCTCAAC
EY918786       <-- ...................................gAGCCGATCCTCAAC
EV524425       --> ..................................................
FY448797       --> ..................................................
FY452560       --> TAAACCGGAAAGTCCAGAAACGGTTTTGACTCCAAAAGCCGATCCT....
FY443489       --> TAAACCGGAAAGTCCAGAAACGGTTTTGACTCCAAAAGCCGATCCTCAAC
EY922912       --> ...................................gAGCCGATCCTCAAC
FD941238       --> ..................................................

               901    -    951
UN09126        --> CGGAGCGAGTAATTCAACAGATTCCGGTTAACTCGCAATGGCAGTACGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439524       <-- CGGAGCGAGTAATTCAACAGATTCCGGTTAACTCGCAATGGCAGTACGTT
FY445541       <-- CGGAGCGAGTAATTCAACAGATTCCGGTTAACTCGCAATGGCAGTACGTT
EV529425       <-- CGGAGCGAGTAATTCAACAGATTCCGGTTAACTCGCAATGGCAGTACGTT
EY918786       <-- CGGAGCGAGTAATTCAACAGATTCCGGTTAACTCGCAATGGCAGTACGTT
EV524425       --> ..................................................
FY448797       --> ..................................................
FY452560       --> ..................................................
FY443489       --> CGGAGCGAGTAATTCAACAGATTCCGGTTAACTCGCAATGGCAGTACGTT
EY922912       --> CGGAGCGAGTAATTCAACAGATTCCGGTTAACTCGCAATGGCAGTACGTT
FD941238       --> ..................................................

               951    -   1001
UN09126        --> GCCCCTGGCCCACAGTTTCATTACCAACCACCGGTTTATATGGTTCAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439524       <-- GCCCCTGGCCCACAGTTTCATTACCAACCACCGGTTTATATGGTTCAACC
FY445541       <-- GCCCCTGGCCCACAGTTTCATTACCAACCACCGGTTTATATGGTTCAACC
EV529425       <-- GCCCCTGGCCCACAGTTTCATTACCAACCACCGGTTTATATGGTTCAACC
EY918786       <-- GCCCCTGGCCCACAGTTTCATTACCAACCACCGGTTTATATGGTTCAACC
EV524425       --> ..................................................
FY448797       --> ..................................................
FY452560       --> ..................................................
FY443489       --> GCCCCTGGCCCACAGTTTCATTACCAACCACCGGTTTATATGGTTCAACC
EY922912       --> GCCCCTGGCCCACAGTTTCATTACCAACCACCGGTTTATATGGTTCAACC
FD941238       --> ..................................................

               1001   -   1051
UN09126        --> GGGCAGTCATATGGTTCAACGAGGTAATCATATGGTTCAACAGAATAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439524       <-- GGGCAGTCATATGGTTCAACGAGGTAATCATATGGTTCAACAGAATAATC  Raphanus sativus cv GSK3-1
FY445541       <-- GGGCAGTCATATGGTTCAACGAGGTAATCATATGGTTCAACAGAATAATC  Raphanus sativus cv GSK3-1
EV529425       <-- GGGCAGTCATATGGTTCAACCAGGTAATCATATGGTTCAACAGAATAATC  Raphanus raphanistrum subsp. maritimus
EY918786       <-- GGGCAGTCATATGGTTCAACCAGGTAATCATATGGTTCAACAGAATAATC  Raphanus raphanistrum subsp. landra
EV524425       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FY448797       --> ..................................................  Raphanus sativus cv GSK3-1
FY452560       --> ..................................................  Raphanus sativus cv GSK3-1
FY443489       --> GGGCAGTCATATGGTTCAACGAGGTAATCATATGGTTCAACAGAATAATC  Raphanus sativus cv GSK3-1
EY922912       --> GGGCAGTCATATGGTTCAACCAGGTAATCATATGGTTCAACAGAATAATC  Raphanus raphanistrum subsp. landra
FD941238       --> ........................................gAGAATAATC  Raphanus sativus var. oleiformis

               1051   -   1101
UN09126        --> ATATGGCTCAACCGGTTCTAATGCCGGGTCAGCGTATTCCACAATACCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439524       <-- ATATGGCTCAACCGGTTCTAATGCCGGGTCAGCGTATTCCACAATACCAG  Raphanus sativus cv GSK3-1
FY445541       <-- ATATGGCTCAACCGGTTCTAATGCCGGGTCAGCGTATTCCACAATACCAG  Raphanus sativus cv GSK3-1
EV529425       <-- ATATGGTTCAACCGGTTCTAATGCCGGGTCAGCGTATGCCACAATACCAG  Raphanus raphanistrum subsp. maritimus
EY918786       <-- ATATGGTTCAACCGGTTCTAATGCCGGGTCAGCGTATTCCACAATACCAG  Raphanus raphanistrum subsp. landra
EV524425       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FY448797       --> ..................................................  Raphanus sativus cv GSK3-1
FY452560       --> ..................................................  Raphanus sativus cv GSK3-1
FY443489       --> ATATGGCTCAACCGGTTCTAATGCCGGGTCAGCGTATTCCACAATACCAG  Raphanus sativus cv GSK3-1
EY922912       --> ATATGGTTCAACCGGTTCTAATGCCGGGTCAGCGTATTCCACAATACCAG  Raphanus raphanistrum subsp. landra
FD941238       --> ATATGGCTCAACCGGTTCTAATGCCGGGTCAGCGTATTCCACAATACCAG  Raphanus sativus var. oleiformis

               1101   -   1151
UN09126        --> CATGTACCGATGGGATACCATCACCAACCACAGCCTCATCAGATTCCTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439524       <-- CATGTACCGATGGGATACCATCACCAACCACAGCCTCATCAGATTCCTGG
FY445541       <-- CATGTACCGATGGGATACCATCACCAACCACAGCCTCATCAGATTCCTGG
EV529425       <-- CATGTACTGATGGGATACCATCACCAACCACAGCCTCATCAGATTCCTGG
EY918786       <-- CATGTACCGATGGGATACCATCACCAACCACAGCCTCATCAGATTCCTGG
EV524425       --> ..................................................
FY448797       --> ..................................................
FY452560       --> ..................................................
FY443489       --> CATGTACCGATGGGATACCATCACCAACCACAGCCTCATCAGATTCCTGG
EY922912       --> CATGTACCGATGGGATACCATCACCAACCACAGCCTCATCAGATTCCTGG
FD941238       --> CATGTACCGATGGGATACCATCACCAACCACAGCCTCATCAGATTCCTGG

               1151   -   1201
UN09126        --> TCTGGGTCAAGTATATGGTGAAACGGGTAGGCCGGTTATGATGGCAGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439524       <-- TCTGGGTCAAGTATATGGTGAAACGGGTAGGCCGGTTATGATGGCAGTTG
FY445541       <-- TCTGGGTCAAGTATATGGTGAAACGGGTAGCCCGGTTATGATGGCAGTTG
EV529425       <-- TCTGGGTCAAGTATATGGTGAAACGGGTAGGCCGGTTATGATGGCAGTTG
EY918786       <-- TCTGGGTCAAGTATATGGTGAAACGGGTAGGCCGGTTATGATGGCAGTTG
EV524425       --> ..................................................
FY448797       --> ..................................................
FY452560       --> ..................................................
FY443489       --> TCTGGGTCAAGTATATGGTGAAACGGGTAGGCCGGTTATGATGGCAGTTG
EY922912       --> TCTGGGTCAAGTATATGGTGAAACGGGTAGGCCGGTTATGATGGCAGTTG
FD941238       --> TCTGGGTCAAGTATATGGTGAAACGGGTAGGCCGGTTATGATGGCAGTTG

               1201   -   1251
UN09126        --> ATGGAGTCAGCCGTACTGCTTATTATGGTATGAATGCATCCGGTCCGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439524       <-- ATGGAGTCAGCCGTACTGCTTATTATGGTATGAATGCATCCGGTCCGGTT
FY445541       <-- ATGGAGTCAGCCGTACTGCTTATTATGGTATGAATGCATCCGGTCCGGTT
EV529425       <-- ATGGAGTCAGCCGTACTGCTTATTATGGTATGAATGCATCCGGTCCGGTT
EY918786       <-- ATGGAGTCAACCGTACTGCTTATTATGGTATGAATGCATCCGGTCCGGTT
EV524425       --> ..................................................
FY448797       --> ..................................................
FY452560       --> ..................................................
FY443489       --> ATGGAGTCAGCCGTACTGCTTATTATGGTATGAATGCATCCGGTCCGGTT
EY922912       --> ATGGAGTCAACCGTACTGCTTATTATGGTATGAATGCATCCGGTCCGGTT
FD941238       --> ATGGAGTCAGCCGTACTGCTTATTATGGTATGAATGCATCCGGTCCGGTT

               1251   -   1301
UN09126        --> CAGATGTATCATCATCAACCTGGTATGGTTGTCCCAGGCGTAGAAGAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439524       <-- CAGATGTATCATCATCAACCTGGTATGGTTGTCCCAGGCGTAGAAGAAAA
FY445541       <-- CAGATGTATCATCATCACCCTGGTATGGTTGTCCCAGGCGTAGAAGAAAA
EV529425       <-- CAGATGTATCATCATCAACCTGGTATGGTTGTCCCAGGCGTAGAAGAAAA
EY918786       <-- CAGATGTATCATCATCAACCTGGTATGGTTGTCCCAGGCGTAGAAGAACA
EV524425       --> ..................................................
FY448797       --> ..................................................
FY452560       --> ..................................................
FY443489       --> CAGATGTATCATCATCAACCTGGTATGGTTGTCCCAGGCGTAGAAGAAAA
EY922912       --> CAGATGTATCATCATCAACCTGGTATGGTTGTCCCAGGCGTAGAAGAACA
FD941238       --> CAGATGTATCATCATCAACCTGGTATGGTTGTTCCAGGCGTAGAAGAAAA

               1301   -   1351
UN09126        --> ATACAGAACTAAAACGGATTCGGATCCGGGTGGGGTGTGAAAGTCATCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439524       <-- ATACAGAACTAAAACGGATTCGGATCCGGGTGGGGTGTGAAAGTCATCTT
FY445541       <-- ATACAGAACTAAAACGGATTCGGATCCGGGTGGGGTGTGAAAGTCATCTT
EV529425       <-- ATACAGAACTAAAACGGATTCGGATCCGGGTGGGGTGTGAAAGTCATCTT
EY918786       <-- ATACAGAACTAAAACGGATTCGGATCCGGGTGGGGTGTGAAAGTCATCTT
EV524425       --> ..................................................
FY448797       --> ..................................................
FY452560       --> ..................................................
FY443489       --> ATACAGAACTAAAACGGATTCGGATCCGGGTGGGGTGTGAAAGTCATCTT
EY922912       --> ATACAGAACTAAAACGGATTCGGATCCGGGTGGGGTGTGAAAGTCATCTT
FD941238       --> ATACAGAACTAAAACGGATTCGGATCCGGGTGGGGTGTGAAAGTCATCTT

               1351   -   1401
UN09126        --> CGTCCTT-GAGGCGTGTCTCAGCATGAACTGTGTAATACATTTCTCTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439524       <-- CGTCCTT-GAGGCGTGTCTCAGCATGAACTGTGTAATACATTTCTCTGCT
FY445541       <-- CGTCCTT-GAGGCGTGTCTCAGCATGAACTGTGTAATACATTTCTCTGCT
EV529425       <-- CGTCCTT-GGGGCGTGTCTCAGCATGAACTGTGTAATACATTTTTCTGCT
EY918786       <-- CGTCCTTTGAGGCGTGT--CAGCATGAACTGTGTAATACATTTTTCTGCT
EV524425       --> ..................................................
FY448797       --> ..................................................
FY452560       --> ..................................................
FY443489       --> CGTCCTT-GAGGCGTGTCTCAGCATGAACTGTGTAATACATTTCTCTGCT
EY922912       --> CGTCCTTTGAGGCGTGTC--AGCATGAACTGTGTAATACATTTCTCTGCT
FD941238       --> CGTCCTT-GAGGCGTGTCTCAGCATGAACTGTGTAATACATTTCTCTGCT

               1401   -   1451
UN09126        --> TTATTTAATCTTTTGTGTAATTTTGTCAACTTTTTTATACAAACTACGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439524       <-- TTATTTAATCTTTTGTGTAATTTTGTCAACTTTTTTATACAAACTACGAT
FY445541       <-- TTATTTAATCTTTTGTGTAATTTTGTCAACTTTTTTATACAAACTACGAT
EV529425       <-- TTATTTAATCTTTTGTGTAATTTTGTCAACTTTTTTATACAAACTACGAT
EY918786       <-- TTATTTAATCTTTTGTGTAATTTTGTCAACTTTTTTTTACAAACTACGAT
EV524425       --> ..................................................
FY448797       --> ..................................................
FY452560       --> ..................................................
FY443489       --> TTATTTAATCTTTTGTGTAATTTTGTCAACTTTTTTATACAAACTACGAT
EY922912       --> TTATTTAATCTTTTGTGTAATTTTGTCAACTTTTTTTTACAAACTACGAT
FD941238       --> TTATTTAATCTTTTGTGTAATTTTGTCAACTTTTTTATACAAACTACGAT

               1451   -   1501
UN09126        --> AACAAAATGAAACCCAATGTCAACATCTTGTAATAAATAATAAATATACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439524       <-- AACAAAATGAAACCCAATGTCAACATCTTGTAATAAATA-TAAATATACA
FY445541       <-- AACAAAAGGAACCCC...................................
EV529425       <-- AACAAAATGAAACCCAATGTCGACATCTTGTAATAAATAATAAATATACA
EY918786       <-- AACAAAATGAAACCCAATGTCAACATCTTGTAATAAATAATAAATATACA
EV524425       --> ..................................................
FY448797       --> ..................................................
FY452560       --> ..................................................
FY443489       --> AACAAAATGAAACCCAATGTCAACATCTTGTAATAAATAATAAATATACA
EY922912       --> AACAAAATGAAACCCAATGTCAACATCTTGTAATAAATAATAAATATACA
FD941238       --> AATAAAATGAAACCCAATGTCAACATCTTGTAATAAATAATAAATATACA

               1501   -   1551
UN09126        --> TCTGTGATTTGCGACACAATTTGCCAAAAAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY439524       <-- .................................
FY445541       <-- .................................
EV529425       <-- TCTGTGATTTGCGACAC................
EY918786       <-- TCTGTGATTTGCGACACAATTTGCC........
EV524425       --> .................................
FY448797       --> .................................
FY452560       --> .................................
FY443489       --> TCTGTGATTTGCG....................
EY922912       --> TCTGTGATTTGCGACACAATTTGCCAAAAAAAA
FD941238       --> TCTGTGATTTGCGA...................