1      -     51
UN09135        --> ATTCTTTAATAGTGAGTATTTCAAACAAGCATCATCACTGACAAATCTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535899       <-- ATTCTTTAATAGTGAGTATTTCAAACAAGCATCATCACTGACAAATCTCA
FD981296       <-- ..................................................
EX893000       --> ATTCTTTAATAGTGAGTATTTCAAACAAGCATCATCACTGACAAATCTCA
FD531460       --> ATTCTTTAATAGTGAGTATTTCAAACAAGCATCATCACTGACAAATCTCA
FD967743       --> ATTCTTTAATAGTGAGTATTTCAAACAACCATCATCACTGACAAATCTCA
FD977073       --> ATTCTTTAATAGTGAGTATTTCAAACAACCATCATCACTGACAAATCTCA

               51     -    101
UN09135        --> GGAACTAA-CTTTAAGTTATACACTCACAAATCCATAACATAAAGAGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535899       <-- GGAACTAA-CTTTAAGTTATACACTCACAAATCCATAACATAAAGAGAGA
FD981296       <-- ...........TTAAGTTATACACTCACAAATCCATAACATAAAGAGAGA
EX893000       --> GGAACTAA-CTTTAAGTTGTACACTCACAAATCCATAACATAAAGAGAGA
FD531460       --> GGAACTAA-CTTTAAGTTATACACTCACAAATCCATAACATAAAGAGAGA
FD967743       --> GGAACTAAACTTTAAGTTATACACTCGCAAATCCATAACATAAAGAGAGA
FD977073       --> AGAACTAA-CTTTAAGTTATACACTCACAAATCCATAACATAAAGAGAGA

               101    -    151
UN09135        --> AATAAAAGCAAAACACGCCAAGAACAAACTCAAGTCTTGTCACCAAATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535899       <-- AATAAAAGCAAAACACGCCAAGAACAAACTCAAGTCTTGTCACCAAATCT
FD981296       <-- AATAAAAGCAAAACACGCCAAGAACAAACTCAAGTCTTGTCACCAAATCT
EX893000       --> AATAAAAGCAAAACACGCCAAGAACAAACTCAAGTCTTGTCACCAAATCT
FD531460       --> AATAAAAGCAAAACACGCCAAGAACAAACTCAAGTCTTGTCACCAAATCT
FD967743       --> AATAAAAGCAAAACACGCCAAGAACAAACTCAAGTCTTGTCACCAAATCT
FD977073       --> AATAAAAGCAAAACACGCCAAGAACAAACTCAAGTCTTGTCACCAAATCT

               151    -    201
UN09135        --> TTTGAACTACGACCAGCCAAACCAGTAATCAAGAATATAGACCAGACCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535899       <-- TTTGAACTACGACCAGCCAAACCAGTAATCAAGAATATAGACCAGACCCA  Raphanus raphanistrum subsp. maritimus
FD981296       <-- TTCGAACTACGACCAGCCAAACCAGTAATCAAGAATATAGACCAGACCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX893000       --> TTTGAACTACGACCAGCCAAACCAGTAATCAAGAATATAGACCAGACCCA  Raphanus sativus var. oleiformis
FD531460       --> TTTGAACTACGACCAGCCAAACCAGTAATCAAGAATATAGACCAGACCCA  Raphanus raphanistrum subsp. maritimus
FD967743       --> TTCGAACTACGACCAGCCAAACCAGTAATCAAGAATATAGACCAGACCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD977073       --> TTCGAACTACGACCAGCCAAACCAGTAATCAAGAATATAGACCAGACCCA  Raphanus raphanistrum subsp. raphanistrum (NY)

               201    -    251
UN09135        --> AAGAGAATGGGTAAAGCAAGTAAGCTATGAAACATGTCCAAAGAGGATAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535899       <-- AAGAGAAAGGGTAAAGCAAGTAAGCTATGAAACATGTCCAAAGAGGATAC  Raphanus raphanistrum subsp. maritimus
FD981296       <-- AAGAGAATGGGTAAAGCAAGTAAGCTATGAAACATGTCCAAAGAGGATAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX893000       --> AAGAGAAAGGGTAAAGCAAGTAAGCTATGAAACATGTCCAAAGAGGATAC  Raphanus sativus var. oleiformis
FD531460       --> AAGAGAAAGGGTAAAGCAAGTAAGCTATGAAACATGTCCAAAGAGGATAC  Raphanus raphanistrum subsp. maritimus
FD967743       --> AAGAGAATGGGTAAAGCAAGTAAGCTATGAAACATGTCCAAAGAGGATAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD977073       --> AAGAGAATGGGTAAAGCAAGTAAGCTATGAAACATGTCCAAAGAGGATAC  Raphanus raphanistrum subsp. raphanistrum (NY)

               251    -    301
UN09135        --> GTTGTGCGGAAGCTAGCAAAACCTCCCATCACAAGACAAACTATGAGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535899       <-- GTTGTGCGGAAACTAGCAAAACCTCCCATCACAAGACAAACTATGAGAAT
FD981296       <-- GTTGTGCGGAAGCTAGCAAAACCTCCCATCACAAGACAAACTATGAGAAT
EX893000       --> GTTGTGCGGAAGCTAGCAAAACCTCCCATCACAAGACAAACTATGAGAAT
FD531460       --> GTTGTGCGGAAACTAGCAAAACCTCCCATCACAAGACAAACTATGAGAAT
FD967743       --> GTTGTGCGGAAGCTAGCAAAACCTCCCATCACAAGACAAACTATGAGAAT
FD977073       --> GTTGTGCGGAAGCTAGCAAAACCTCCCATCACAAGACAAACTATGAGAAT

               301    -    351
UN09135        --> CACCAACACTTCTGATGAGAAGTTCCATGTTAACCCTCGAACGTAGACGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535899       <-- CACCAACACTTCTGATGAGAAGTTCCATGTTAACCCTCGAACGTAGACGA
FD981296       <-- CACCAACACTTCTGATGAGAAGTTCCATGTTAACCCTCGAACGTAGACGA
EX893000       --> CACCAACACTTCTGATGAGAAGTTCCATGTTAACCCTCGAACGTAGACGA
FD531460       --> CACCAACACTTCTGATGAGAAGTTCCATGTTAACCCTCGAACGTAGACGA
FD967743       --> CACCAACACTTCTGATGAGAAGTTCCATGTTAACCCTCGAACGTAGACGA
FD977073       --> CACCAACACTTCTGATGAGAAGTTCCATGTTAACCCTCGAACGTAGACGA

               351    -    401
UN09135        --> TTGCTAAGAACACGGAGAGACACAAAATGTTGTTCATTGTCACTCCACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535899       <-- TTGCTAAGAACACGGAGAGACACAAAATGTTGTTCATCGTCACTCCACCA  Raphanus raphanistrum subsp. maritimus
FD981296       <-- TTGCTAAGAACACCGAGAGACACAAAATGTTGTTCATTGTCACTCCACCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX893000       --> TTGCTAAGAACACGGAGAGACACAAAATGTTGTTCATCGTCACTCCACCA  Raphanus sativus var. oleiformis
FD531460       --> TTGCTAAGAACACGGAGAGACACAAAATGTTGTTCATCGTCACTCCACCA  Raphanus raphanistrum subsp. maritimus
FD967743       --> TTGCTAAGAACACCGAGAGACACAAAATGTTGTTCATTGTCACTCCACCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD977073       --> TTGCTAAGAACACCGAGAGACACAAAATGTTGTTCATTGTCACTCCACCA  Raphanus raphanistrum subsp. raphanistrum (NY)

               401    -    451
UN09135        --> CATAGCTCAGAGAATGTCAAGGAAGCTGTTCTGATCTTTTTGCGAGAGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535899       <-- CATAGCTCAGAGAATGTCAAGGAAGCTGTTCTGATCTTTTTGCGAGAGGC
FD981296       <-- CATAGCTCAGAGAATGTCAAGGAAGCTGTTCTGATCTTTTTGCGGGAGGC
EX893000       --> CATAGCTCAAAAAATGTCAAGGAAGCTGTTCTGATCTTTTTGCGAGAGGC
FD531460       --> CATAGCTCAGAGAATGTCAAGGAAGCTGTTCTGATCTTTTTGCGAGAGGC
FD967743       --> CATAGCTCAAAGAATGTCAAGGAAGCTGTTCTGATCTTTTTGCGAGAGGC
FD977073       --> CATAGCTCAGAGAATGTCAAGGAAGCTGTTCTGATCTTTTTGCGGGAGGC

               451    -    501
UN09135        --> GAAGATGATGGCAGAGACTGCTTCACTTGAGTTTGTGGCTAAAGGCAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535899       <-- GAAGATGATGGCAGAGACTGCTTCACTTGAGTTTGTGGCTAAAGGCAAAG  Raphanus raphanistrum subsp. maritimus
FD981296       <-- GAAGATGATGGCAGAGACTGCTTCACTTGAGTTGGTGGCTAAAGGCAAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX893000       --> GAAAATGATGGCAGAAACTGCTTCACTTGAGTTGGTGGCTAAAGGCAAAG  Raphanus sativus var. oleiformis
FD531460       --> GAAGATGATGGCAGAGACTGCTTCACTTGAGTTTGTGGCTAAAGGCAAAG  Raphanus raphanistrum subsp. maritimus
FD967743       --> GAAGATGATGGCAGAGACTGCTTCACTTGAGTTTGTGGCTAAAGGCAAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD977073       --> GAAGATGATGGCAGAAACTGCTTCACTTGAGTTGGTGGCTAAAGGCAAAG  Raphanus raphanistrum subsp. raphanistrum (NY)

               501    -    551
UN09135        --> CGATGAAGGAGATGAAGAAAGATGGAATCCCAGTGGCTGCTGAGAAGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535899       <-- CGATGAAGGAAATGAAGAAAGATGGAATCCCAGTGGCTGCTGAGAAGTTG  Raphanus raphanistrum subsp. maritimus
FD981296       <-- CGATGAAGGAGATGAAGAAAGATGGAATCCCAGTGGCTGCTGAGAAGTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX893000       --> CGATGAAGGAGATGAAGAAAGATGGAATCCCTGTGGCTGCTGAGAAGTTG  Raphanus sativus var. oleiformis
FD531460       --> CGATGAAGGAAATGAAGAAAGATGGAATCCCAGTGGCTGCTGAGAAGTTG  Raphanus raphanistrum subsp. maritimus
FD967743       --> CGATGAAGGAAATGAAGAAAGATGGAATCCCAGTGGCTGCTGAGAAGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD977073       --> CGATGAAGGAGATGAAGAAAGATGGAATCCCAGTGGCTGCTGAGAAGTTG  Raphanus raphanistrum subsp. raphanistrum (NY)

               551    -    601
UN09135        --> TTAACTGTGTCCACTAAAGGATCAGCAAACGCAGCTGCAATGGCTGCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535899       <-- TTAACTGTGTCAACTAAAGGATCAGCAAACGCAGCTGCAATGGCTGCTCC  Raphanus raphanistrum subsp. maritimus
FD981296       <-- TTAACTGTGTCCACTAAAGGATCAGCAAACGCAGCTGCAATGGCTGCTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX893000       --> TTAACTGTGTCAACTAAAGGATCAGCAAACGCAGCTGCAATGGCTGCTCC  Raphanus sativus var. oleiformis
FD531460       --> TTAACTGTGTCAACTAAAGGATCAGCAAACGCAGCTGCAATGGCTGCTCC  Raphanus raphanistrum subsp. maritimus
FD967743       --> TTAACTGTGTCCACTAAAGGATCGGCAAACGCAGCTGCAATGGCTGCTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD977073       --> TTAACTGTGTCCACTAAAGGATCAGCAAACGCAGCTGCAATGGCTGCTCC  Raphanus raphanistrum subsp. raphanistrum (NY)

               601    -    651
UN09135        --> TAAGAGTAGCAACAAAGCTGCTTTGATAGTGATCCATTTCGGGTCTGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535899       <-- TAAGAGTAGCAACAAAGCTGCTTTGATAGTGATCCATTTCGGGTCTGCAA
FD981296       <-- TAAGAGTAGCAACAAAGCTGCTTTGATAGTGATCCATTTAGGGTCTGCAA
EX893000       --> TAAGAGTAGCAACAAAGCTGCTTTGATAGTGATCCATTTCGGGTCTGCAA
FD531460       --> TAAGAGTAGCAACAAAGCTGCTTTGATAGTGATCCATTTCGGGTCTGCAA
FD967743       --> TAAGAGCAGCAACAAAGCTGCTTTGATAGTGATCCATTTCGGGTCTGCAA
FD977073       --> TAAGAGTAGCAACAAAGCTGCTTTGATAGTGATCCATTTAGGGTCTGCAA

               651    -    701
UN09135        --> CCTCTCCTGATTCCTCATCATTCTCACCATTCTCATTATCTCCCAACAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535899       <-- CCTCTCCTGATTCCTCATCATTCTCACCATTCTCATTATCTCC.......
FD981296       <-- CCTCTCCTGATTCCTCGTCATTCTCACCATTCTCATTATCTCCCAACAGG
EX893000       --> CCTCTCCTGATTCCTCATCATTCTCACCATTCTCATTATCTCCCAACAGA
FD531460       --> CCTCTCCTGATTCCTCATCATTCTCACCATTCTCATTATCTCC.......
FD967743       --> CCTCTCCTGATTCCTCATCATTCTCACCATTCTCATTATCTCCCAACAGA
FD977073       --> CCTCTCCTGATTCCTCGTCATTCTCACCATTCTCATTATCTCCCAACAGG

               701    -    751
UN09135        --> GCATGCTCTCTCTTTGTTTGCACATGGAAATGGTCAAGGTACTTCATGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535899       <-- ..................................................
FD981296       <-- GCATGCTCTCTCTTTGTTTGCACATGGAAATGGTCAAGGTACTTCATGGT
EX893000       --> GCGTGCTCTCTCTTTGTTTGCACATGGAAATGGTCAAGGTACTTCATGGT
FD531460       --> ..................................................
FD967743       --> GCATGCTCTCTCTTTGTTTGCACATGGAAATGGT................
FD977073       --> GCATGCTCTCTCTTTGTTTGCACATGGAAATG..................

               751    -    801
UN09135        --> TCTAGGACCAGCATCAGGACCAGAAGGACCAGCAGCTCCCATTGCCTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535899       <-- ..................................................
FD981296       <-- TCTAGGACCAGCATCAGGACCAGAAGGACCAGCAGCTCCCATTGCCTGAA
EX893000       --> TCTAGG............................................
FD531460       --> ..................................................
FD967743       --> ..................................................
FD977073       --> ..................................................

               801    -    851
UN09135        --> TAAGCCAACGCTTAATCCCACGGACAAACTCCTCTTGATCAACTTGCTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535899       <-- ..................................................
FD981296       <-- TAAGCCAACGCTTAATCCCACGGACAAACTCCTCTTGATCAACTTGCTCA
EX893000       --> ..................................................
FD531460       --> ..................................................
FD967743       --> ..................................................
FD977073       --> ..................................................

               851    -    901
UN09135        --> TCAAGAGTCTTGTCC
                   ~~~~~~~~~~~~~~~
FD535899       <-- ...............
FD981296       <-- TCAAGAGTCTTGTCC
EX893000       --> ...............
FD531460       --> ...............
FD967743       --> ...............
FD977073       --> ...............