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Alignment for radish unigene UN09192

               1      -     51
UN09192        --> AAGTCTAATTTTCTTTTACAAACAGAAGGTTTGATAAACATCGTTTGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY897839       <-- AAGTCTAATTTTCTTTTACAAACAGAAGGTTTGATAAACATCGTTTGATT
EV567588       <-- .................................................c
FY432876       <-- ..................................................
EV568286       <-- ..................................................
EV568895       <-- ..................................................
EX886588       <-- ..................................................
EV573048       --> ..................................................
EV573520       --> ..................................................
EX890940       --> ..................................................
FD977778       --> ..................................................
FD985981       --> ..................................................
EV572500       --> ..................................................

               51     -    101
UN09192        --> CTGCTTGAAATTAAATTGTTATTTATTTCGCAAATCACATGAAAAAACCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY897839       <-- CTGCTTGAAATTAAATTGTTATTTATTTCGCAAATCACATGAAAAAACCT
EV567588       <-- CTGCTTGAAATTAAATTGTTATTTATTTCGCAAATCACATGAAAAAACCT
FY432876       <-- ..................................................
EV568286       <-- ..................................................
EV568895       <-- ..................................................
EX886588       <-- ..................................................
EV573048       --> ccGCTTGAAATTAAATTGTTATTTATTTCGCAAATCACATGAAAAAACCT
EV573520       --> ccGCTTGAAATTAAATTGTTATTTATTTCGCAAATCACATGAAAAAACCT
EX890940       --> ..GCTTGAAATTAAATTGTTATTTATTTCGCAAATCACATGAAAAAACCT
FD977778       --> ..GCTTGAAATTAAACAGTTATTTATTTCGCAAATCACATGAAAAAACCT
FD985981       --> ..GCTTGAAATTAAATTGTTATTTATTTCGCAAATCACATGAAAAAACCT
EV572500       --> ..................................................

               101    -    151
UN09192        --> TCCATGATTTGAAACGGAGCAAGATCAATTTAATTCTGCTCAATCCAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY897839       <-- TCCATGATTTGAAACGGAGCAAGATCAATTTAATTCTGCTCAATCCAAAA
EV567588       <-- TCCATGATTTGAAACGGAGCAAGATCAATTTAATTCTGCTCAATCCAAAA
FY432876       <-- ..................................................
EV568286       <-- ..................................................
EV568895       <-- ..................................................
EX886588       <-- ..................................................
EV573048       --> TCCATGATTTGAAACGGAGCAAGATCAATTTAATTCTACTCAATCCAAAA
EV573520       --> TCCATGATTTGAAACGGAGCAAGATCAATTTAATTCTACTCAATCCAAAA
EX890940       --> TCCATGATTTGAAACGGAGCAAGATCAATTTAATTCTGCTCAATCCAAAA
FD977778       --> TTCATGATTTGAAACGGAGCAAGATCAATTTAATTCTGCTCAATCCAAAA
FD985981       --> TCCATGATTTGAAACGGAGCAAGATCAATTTAATTCTGCTCAATCCAAAA
EV572500       --> ......ATTTGAAACGGAGCAAGATCAATTTAATTCTGCTCAATCCAAAA

               151    -    201
UN09192        --> GGGCAAAAGAAAAAAAAGGAGATAGAAGAGTGTTAACTTCAACATAGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY897839       <-- GGGCAAAAGAAAAAAAAGGAGATAGAAGAGTGTTAACTTCAACATAGGAA
EV567588       <-- GGGCAAAGGAAAAAAA-GGAGATAAAAGAGTGTTAACTTCAACATAGGAA
FY432876       <-- ..................................................
EV568286       <-- ..................................................
EV568895       <-- ..................................................
EX886588       <-- ..................................................
EV573048       --> GGGCAAAAGAAAAAAAAGGAGATAGAAGAGTGTTAACTTCAACATAGGAA
EV573520       --> GGGCAAAAGAAAAAAAAGGAGATAGAAGAGTGTTAACTTCAACATAGGAA
EX890940       --> GGGCAAAAGAAAAAAA-GGAGATAGAAGAGTGTTAACTTCAACATAGGAA
FD977778       --> GGGCAAAAGAAAAAAA-GGAGATAAAAGAGTGTTAACTTCAGCATAGGAA
FD985981       --> GGGCAAAAGAAAAAAAAGGAGATAGAAGAGTGTTAACTTCAACATAGGAA
EV572500       --> GGGCAAAGGAAAAAAA-GGAGATAAAAGAGTGTTAACTTCAACATAGGAA

               201    -    251
UN09192        --> AAGAAAAGAGAGTGACATCTCTCTTGAATAGACACACAGAATTGACGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY897839       <-- AAGAAAAGAGAGTGACGTCTCTCTTGAATAGACACACAGAATTGACGAAG
EV567588       <-- AAGAAAAGAGAGTGACATCTCTGTTGATTAGACACACAGAATTGACGAAG
FY432876       <-- ..........AGTGACATCTCTCTTGAATAGACACACAGAATTGACGAAG
EV568286       <-- ..................................................
EV568895       <-- ..................................................
EX886588       <-- ..................................................
EV573048       --> AAGAAAAGAGAGTGACATCTCTCTTGAATAGACACA--GAATTGACGAAG
EV573520       --> AAGAAAAGAGAGTGACATCTCTCTTGAATAGACACA--GAATTGACGAAG
EX890940       --> AAGAAAAGAGAGTGACATCTCTCTTGAATAGACACACAGAATTGACGAAG
FD977778       --> AAGAAAAGAGAGTAACATCTCTGTTGATTAGACACACAGTATTGACGAAG
FD985981       --> AAGAAAAGAGAGTGACATCTCTCTTGAATAGACACA--GAATTGACGAAG
EV572500       --> AAGAAAAGAGAGTGACATCTCTGTTGATTAGACACACAGAATTGACGAAG

               251    -    301
UN09192        --> AAGATT-CATCATTTCTGCTCTTCTGATGGCTTTGCTGCTTCCTTTATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY897839       <-- AAGATTTCATCATTTCTGCTCTTCTGATGGCTTTGCTGCTTCCTTTATCT
EV567588       <-- AAGATT-CATCATTTCTGCTCTTCTGTTGGCTTTGCTGCTTCCTTTATCT
FY432876       <-- AAGATT-CATCATTTCTGCTCTTCTGATGGCTTTGCTGCTTCCTTTATCT
EV568286       <-- .........................GATGGCTT-GCTGCTTCCTTTATCT
EV568895       <-- ..................................................
EX886588       <-- ..................................................
EV573048       --> AAGATT-CATCATTTCTGCTCTTCTGATGGCTTTGCTGCTTCCTTTATCT
EV573520       --> AAGATT-CATCATTTCTGCTCTTCTGATGGCTTTGCTGCTTCCTTTATCT
EX890940       --> AAGATT-CATCATTTCTGCTCTTCTGATGGCTTTGCTGCTTCCTTTATCT
FD977778       --> AAGATT-CATCATTTCTGCTCTTCTGATGGCTTTGCTGCTTCCTTTATCT
FD985981       --> AAGATT-CATCATTTCTGCTCTTCTGATGGCTTTGCTGCTTCCTTTATCT
EV572500       --> AAGATT-CATCATTTCTGCTCTTCTGTTGGCTTTGCTGCTTCCTTTATCT

               301    -    351
UN09192        --> CATCTGCAGTTTCATCCTGCATGTCGGATGTCCAGAGAGTGAGGTTGTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY897839       <-- CATCTGCAGTTTCATCCTGCATGTCGGATGTCCAGAGAGTGAGGTTGTCA
EV567588       <-- CATCTGCAGTTTCATCCTGCATGTCGGATGTCCAGAGAGTGAGGTTGTCA
FY432876       <-- CATCTGCAGTTTCATCCTGCATGTCGGATGTCCAGAGAGTGAGGTTGTCA
EV568286       <-- CATCTGCAGTTTCATC-TGCATGTCGGATGTCCAGAGAGTGAGGTTGTCA
EV568895       <-- ..................................................
EX886588       <-- ..................................................
EV573048       --> CATCTGCAGTTTCATCCTGCATGTCGGATGTCCAGAGAGTGAGGTTGTCA
EV573520       --> CATCTGCAGTTTCATCCTGCATGTCGGATGTCCAGAGAGTGAGGTTGTCA
EX890940       --> CATCTGCAGTTTCATCCTGCATGTCGGATGTCCAGAGAGTGAGGTTGTCA
FD977778       --> CATCTGCAGTTTCATCCTGCATGTCGGATGTCCAGAGAGTGAGGTTGTCA
FD985981       --> CATCTGCAGTTTCATCCTGCATGTCGGATGTCCAGAGAGTGAGGTTGTCA
EV572500       --> CATCTGCAGTTTCATCCTGCATGTCGGATGTCCAGAGAGTGAGGTTGTCA

               351    -    401
UN09192        --> CGGAGAAGCTGCATGATCAAAGTGCTATCCTTGTACGACTCTTCCCCTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY897839       <-- CGGAGAAGCTGCATGATCAAAGTGCTATCCTTGTACGACTCTTCCCCTAG
EV567588       <-- CGGAGAAGCTGCATGATCAAAGTGCTATCCTTGTACGACTCTTCCCCTAG
FY432876       <-- CGGAGAAGCTGCATGATCAAAGTGCTATCCTTGTACGACTCTTCCCCTAG
EV568286       <-- CGGAGAAGCTGCATGATCAAAGTGCTATCCTTGTACGACTCTTCCCCTAG
EV568895       <-- .................................TACGACTCTTCCCCTAG
EX886588       <-- ..................................................
EV573048       --> CGGAGAAGCTGCATGATCAAAGTGCTATCCTTGTACGACTCTTCCCCTAG
EV573520       --> CGGAGAAGCTGCATGATCAAAGTGCTATCCTTGTACGACTCTTCCCCTAG
EX890940       --> CGGAGAAGCTGCATGATCAAAGTGCTATCCTTGTACGACTCTTCCCCTAG
FD977778       --> CGGAGAAGCTGCATGATCAAAGTGCTATCCTTGTACGACTCTTCACCTAG
FD985981       --> CGGAGAAGCTGCATGATCAAAGTGCTATCCTTGTACGACTCTTCCCCTAG
EV572500       --> CGGAGAAGCTGCATGATCAAAGTGCTATCCTTGTACGACTCTTCCCCTAG

               401    -    451
UN09192        --> TGTATCTAACTCAGCAATCGCAGCATCAAAAGCCGTTTTGGCGAGGTTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY897839       <-- TGTATCTAACTCAGCAATCGCAGCATCAAAAGCCGTTTTGGCGAGGTTGC  Raphanus raphanistrum subsp. maritimus
EV567588       <-- TGTATCTAACTCAGCAATCGCAGCATCAAAAGCCGTTTTGGCGAGGTTGC  Raphanus raphanistrum subsp. landra
FY432876       <-- TGTATCCAACTCAGCAATCGCAGCATCAAAAGCCGTTTTGGCGAGGTTGC  Raphanus sativus cv GSK3-1
EV568286       <-- TGTATCTAACTCAGCAATAGCAGCATCAAAAGCCGTTTTGGCGAGGTTGC  Raphanus raphanistrum subsp. landra
EV568895       <-- TGTATCTAACTCAGCAATAGCAGCATCAAAAGCCGTTTTGGCGAGGTTGC  Raphanus raphanistrum subsp. landra
EX886588       <-- TGTATCCAACTCAGCAATCGCAGCATCAAAAGCCGTTTTGGCGAGGTTGC  Raphanus sativus var. oleiformis
EV573048       --> TGTATCTAACTCAGCAATAGCAGCATCAAAAGCCGTTTTGGCGAGGTTGC  Raphanus raphanistrum subsp. landra
EV573520       --> TGTATCTAACTCAGCAATAGCAGCATCAAAAGCCGTTTTGGCGAGGTTGC  Raphanus raphanistrum subsp. landra
EX890940       --> TGTATCCAACTCAGCAATCGCAGCATCAAAAGCCGTTTTGGCGAGGTTGC  Raphanus sativus var. oleiformis
FD977778       --> TGTATCCAACTCAGCAATCGCAGCATCAAAAGCCGTTTTGGCGAGGTTGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD985981       --> TGTATCTAACTCAGCAATAGCAGCATCAAAAGCCGTTTTGGCGAGGTTGC  Raphanus raphanistrum subsp. landra
EV572500       --> TGTATCTAACTCAGCAATCGCAGCATCAAAAGCCGTTTTGGCGAGGTTGC  Raphanus raphanistrum subsp. landra

               451    -    501
UN09192        --> AAGCACGATCAGGAGAATTGAGGATCTCGTAATAGAACACAGAGAAGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY897839       <-- AAGCACGATCAGGAGAATTGAGGATCTCGTAATAGAACACAGAGAAGTTC
EV567588       <-- AAGCACGATCAGGAGAATTGAGGATCTCGTAATAGAACACAGAGAAGTTC
FY432876       <-- AAGCACGATCAGGAGAATTGAGGATCTCGTAATAGAACACAGAGAAGTTC
EV568286       <-- AAGCACGGTCAGGAGAATTGAGGATCTCGTAATAGAACACAGAGAAGTTC
EV568895       <-- AAGCACGGTCAGGAGAATTGAGGATCTCGTAATAGAACACAGAGAAGTTC
EX886588       <-- AAGCACGATCAGGAGAATTGAGGATCTCGTAATAGAACACAGAGAAGTTC
EV573048       --> AAGCACGGTCAGGAGAATTGAGGATCTCGTAATAGAACACAGAGAAGTTC
EV573520       --> AAGCACGGTCAGGAGAATTGAGGATCTCGTAATAGAACACAGAGAAGTTC
EX890940       --> AAGCACGATCAGGAGAATTGAGGATCTCGTAATAGAACACAGAGAAGTTC
FD977778       --> AAGCACGATCAGGAGAATTGAGGATCTCGTAATAGAACACAGAGAAGTTC
FD985981       --> AAGCACGGTCAGGAGAATTGAGGATCTCGTAATAGAACACAGAGAAGTTC
EV572500       --> AAGCACGATCAGGAGAATTGAGGATCTCGTAATAGAACACAGAGAAGTTC

               501    -    551
UN09192        --> AACGCCAAACCAAGACGGATCGGGTGAGTTGGAGCAAGCCCCTTCGCATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY897839       <-- AACGCCAAACCAAGACGGATCGGGTGAGTTGGAGCAAGCCCCTTCGCATT
EV567588       <-- AACGCCAAACCAAGACGGATCGGGTGAGTTGGAGCAAGCCCCTTCGCATT
FY432876       <-- AACGCCAAACCAAGACGGATCGGGTGAGTTGGAGCAAGCCCCTTCGCATT
EV568286       <-- AACGCCAAACCAAGACGGATCGGGTGAGTTGGAGCAAGCCCCTTCGCATT
EV568895       <-- AACGCCAAACCAAGACGGATCGGGTGAGTTGGAGCAAGCCCCTTCGCATT
EX886588       <-- AACGCCAAACCAAGACGGATCGGGTGAGTTGGAGCAAGCCCCTTCGCATT
EV573048       --> AACGCCAAACCAAGACGGATCGGGTGAGTTGGAGCAAGCCCCTTCGCATT
EV573520       --> AACGCCAAACCAAGACGGATCGGGTGAGTTGGAGCAAGCCCCTTCGCATT
EX890940       --> AACGCCAAACCAAGACGGATCGGGTGAGTTGGAGCAAGCCCCTTCGCATT
FD977778       --> AACGCCAAACCAAGACGGATCGGGTGAGTTGGAGCAAGCCCCTTCGCATT
FD985981       --> AACGCCAAACCAAGACGGATCGGGTGAGTTGGAGCAAGCCCCTTCGCATT
EV572500       --> AACGCCAAACCAAGACGGATCGGGTGAGTTGGAGCAAGCCCCTTCGCATT

               551    -    601
UN09192        --> GTCCTGAGCAGATTCGTAAGCCGATAAGGTGTTATCAGCCGCATCATCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY897839       <-- GTCCTGAGCAGATTCGTAAGCCGATAAGGTGTTATCAGCCGCATCATCCC
EV567588       <-- GTCCTGAGCAGATTCGTAAGCCGATAAGGTGTTATCAGCCGCATCGTCCC
FY432876       <-- GTCCTGAGCAGATTCGTAAGCCGATAAGGTGTTATCAGCCGCATCATCCC
EV568286       <-- GTCCTGAGCAGATTCGTAAGCCGATAAGGTGTTATCAGCCGCATCATCCC
EV568895       <-- GTCCTGAGCAGATTCGTAAGCCGATAAGGTGTTATCAGCCGCATCATCCC
EX886588       <-- GTCCTGAGCAGATTCGTAAGCCGATAAGGTGTTATCAGCCGCATCATCCC
EV573048       --> GTCCTGAGCAGATTCGTAAGCCGATAAGGTGTTATCAGCCGCATCATCCC
EV573520       --> GTCCTGAGCAGATTCGTAAGCCGATAAGGTGTTATCAGCCGCATCATCCC
EX890940       --> GTCCTGAGCAGATTCGTAAGCCGATAAGGTGTTATCAGCCGCATCATCCC
FD977778       --> GTCCTGAGCAGATTCGTAAGCCGATAAGGTGTTATCAGCCGCATCGTCCC
FD985981       --> GTCCTGAGCAGATTCGTAAGCCGATAAGGTGTTATCAGCCGCATCATCCC
EV572500       --> GTCCTGAGCAGATTCGTAAGCCGATAAGGTGTTATCAGCCGCATCGTCCC

               601    -    651
UN09192        --> TCTCCTTACCGATCTTGAACTCAGCCAAGTACCTATAGTAATCACCTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY897839       <-- TCTCCTTACCGATCTTGAACTCAGCCAAGTACCTATAGTAATCACCTTTC
EV567588       <-- TCTCCTTACCGATCTTGAACTCAGCCAAGTACCTATAGTAATCACCTTTC
FY432876       <-- TCTCCTTACCGATCTTGAACTCAGCCAAGTACCTATAGTAATCACCTTTC
EV568286       <-- TCTCCTTACCGATCTTGAACTCAGCCAAGTACCTATAGTAATCACCTTTC
EV568895       <-- TCTCCTTACCGATCTTGAACTCAGCCAAGTACCTATAGTAATCACCTTTC
EX886588       <-- TCTCCTTACCGATCTTGGACTCAGCCAAGTACCTATAGTAATCACCTTTC
EV573048       --> TCTCCTTACCGATCTTGAACTCAGCCAAGTACCTATAGTAATCACCTTTC
EV573520       --> TCTCCTTACCGATCTTGAACTCAGCCAAGTACCTATAGTAATCACCTTTC
EX890940       --> TCTCCTTACCGATCTTGGACTCAGCCAAGTACCTATAGTAATCACCTTTC
FD977778       --> TCTCCTTACCGATCTTGAACTCAGCCAAGTACCTATAGTAATCACCTTTC
FD985981       --> TCTCCTTACCGATCTTGAACTCAGCCAAGTACCTATAGTAATCACCTTTC
EV572500       --> TCTCCTTACCGATCTTGAACTCAGCCAAGTACCTATAGTAATCACCTTTC

               651    -    701
UN09192        --> ATCTTTAGGTAGAACACCTTGGAGTCCTCGGAGGCGGCGGAAGGGACGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY897839       <-- ATCTTTAGGTAGAACACCTTGGAGTCCTCGGAGGCGGCGGAAGGGACGAG
EV567588       <-- ATCTTGAGGTAGAACACCTTc.............................
FY432876       <-- ATCTTGAGGTAGAACACCTTGGAGTCCTCGGAGGCGGCGGATGGGACGAG
EV568286       <-- ATCTTTAGGTAGAACACCTTGGAGTCCTCGGAGGCGGCGGAAGGGACGAG
EV568895       <-- ATCTTTAGGTAGAACACCTTGGAGTCCTCGGAGGCGGCGGAAGGGACGAG
EX886588       <-- ATCTTGAGGTAGAACACCTTGGAGTCCTCGGAGGCGGCGGATGGGACGAG
EV573048       --> ATCTTTAGGTAGAACACCTTGGAGTCCTCGGAGGCGGCGGAAGGGACGAG
EV573520       --> ATCTTTAGGTAGAACACCTTGGAGTCCTCGGAGGCGGCGGAAGGGACGAG
EX890940       --> ATCTTGAGGTAGAACACCTTGGAGTCCTCGGAGGCGGCGGATGGGACGAG
FD977778       --> ATCTTGAGGTAGAACACCTTGGAGTCCTCGGAAGCGGCG...........
FD985981       --> ATCTTTAGGTAGAACACCTTGGAGTCCTCGGAGGCGGCGGAAGGGACGAG
EV572500       --> ATCTTGAGGTAGAACACCTTc.............................

               701    -    751
UN09192        --> CGTGGAGTCGAGCAGCTTCAGGATCCCGTCGCAGATCCCCGCGAGCTCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY897839       <-- CGTGGAGc..........................................  Raphanus raphanistrum subsp. maritimus
EV567588       <-- ..................................................  Raphanus raphanistrum subsp. landra
FY432876       <-- CGTGGAGTCGAGCAGCTTCAGGATCCCGTCGCAGATCCCGGCTAGCTCCG  Raphanus sativus cv GSK3-1
EV568286       <-- CGTGGAGTCGAGCAGCTTCAGGATCCCGTCGCAGATCCCCGCGAGCTCCG  Raphanus raphanistrum subsp. landra
EV568895       <-- CGTGGAGTCGAGCAGCTTCAGGATCCCGTCGCAGATCCCCGCGAGCTCCG  Raphanus raphanistrum subsp. landra
EX886588       <-- CGTGGAGTCGAGCAGCTTCAGGATCCCGTCGCAGATCCCGGCTAGCTCCG  Raphanus sativus var. oleiformis
EV573048       --> CGTGGAGTCGAGCAGCTTCAGGATCCCGTCGCAGATCCCCGCGAGCTCCG  Raphanus raphanistrum subsp. landra
EV573520       --> CGTGGAGTCGAGCAGCTTCAGGATCCCGTCGCAGATCCCCGCGAGCTCCG  Raphanus raphanistrum subsp. landra
EX890940       --> CGTGGAGTCGAGCAGCTTCAGGATCCCGTCGCAGATCCCGGCTAGCTCCG  Raphanus sativus var. oleiformis
FD977778       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD985981       --> CGTGGAGTCGAGCAGCTTCAGGATCCCGTCGCAGATCCCCGCGAGCTCCG  Raphanus raphanistrum subsp. landra
EV572500       --> ..................................................  Raphanus raphanistrum subsp. landra

               751    -    801
UN09192        --> TCTCGATCTTCGCCTTGTAGTCGCGGATCGTCTTGACGCGGTCGTCGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY897839       <-- ..................................................
EV567588       <-- ..................................................
FY432876       <-- TCTCGATCTTCGCCTTGTAGTCGCGGATCGTCTTGACGCGGTCGTCGTTG
EV568286       <-- TCTCGATCTTCACCTTGTAGTCGCGGATCGTCTTGACGCGGTCGTCGTTG
EV568895       <-- TCTCGATCTTCACCTTGTAGTCGCGGATCGTCTTGACGCGGTCGTCGTTG
EX886588       <-- TCTCGATCTTCGCCTTGTAGTCGCGGATCGTCTTGACGCGGTCGTCGTTG
EV573048       --> TCTCGATCTTCACCTTGTAGTCGCGGATCGTCTTGACGCGGTCGTCGTTG
EV573520       --> TCTCGATCTTCACCTTGTAGTCGCGGATCGTCTTGACGCGGTCGTCGTTG
EX890940       --> TCTCGATCTTCGCCTTGTAGTCGCGGATCGTCTTGACGCGGTCGTCGTTG
FD977778       --> ..................................................
FD985981       --> TCTCGATCTTCGCCTTGTAGTCGCGGATCGTCTTGACGCGGTCGTCGTTG
EV572500       --> ..................................................

               801    -    851
UN09192        --> CCGCGGCTCTCCTCCTTCTGCTCGATCGAGGAGATGATCCGCCACGAGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY897839       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV567588       <-- ..................................................  Raphanus raphanistrum subsp. landra
FY432876       <-- CCGCGGCTCTCCTCCTTCTGCTCGATCGAGGAGATGATACGCCACGAGGC  Raphanus sativus cv GSK3-1
EV568286       <-- CCGCGGCTCTCCTCCTTCTGCTCGATCGAGGAGATGATCCGCCACGAGGC  Raphanus raphanistrum subsp. landra
EV568895       <-- CCGCGGCTCTCCTCCTTCTGCTCGATCGAGGAGATGATCCGCCACGAGGC  Raphanus raphanistrum subsp. landra
EX886588       <-- CCGCGGCTCTCCTCCTTCTGCTCGATCGAGGAGATGATACGCCACGAGGC  Raphanus sativus var. oleiformis
EV573048       --> CCGCGGCTCTCCTCCTTCTGCTCGATCGAGGAGATGATCCGCCACGAGGC  Raphanus raphanistrum subsp. landra
EV573520       --> CCGCGGCTCTCCTCCTTCTGCTCGATCGAGGAGATGATCCGCCACGAGGC  Raphanus raphanistrum subsp. landra
EX890940       --> CCGCGGCTCTCCTCCTTCTGCTCGATCGAG-AGATGATACGCCACGAGGC  Raphanus sativus var. oleiformis
FD977778       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD985981       --> CCGCGGCTATCCTCCTTCTGCTCGATCGAGGAGATGATCCGCCACGAG-C  Raphanus raphanistrum subsp. landra
EV572500       --> ..................................................  Raphanus raphanistrum subsp. landra

               851    -    901
UN09192        --> GCGGCGAGCGCCGATCACGTTCTTGTACGCGACGGAGAGGAGGTTGCGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY897839       <-- ..................................................
EV567588       <-- ..................................................
FY432876       <-- GCGCCGAGCGCCGATCACGTTCTTGTACGCGACGGAGAGGAGGTTGCGCT
EV568286       <-- GCGGCGAGCGCCGATCACGTTCTTGTACGCGACGGAGAGGAGGTTGCGCT
EV568895       <-- GCGGCGAGCGCCGATCACGTTCTTGTACGCGACGGAGAGGAGGTTGCGCT
EX886588       <-- GCGCCGAGCGCCGATCACGTTCTTGTACGCGACGGAGAGGAGGTTGCGCT
EV573048       --> GCGGCGAGCGCCGATCACGTTCTTGTACGCGACGG...............
EV573520       --> GCGGCGAGCGCCGATCACGTTCTTGTACGCGAC.................
EX890940       --> GCGcga............................................
FD977778       --> ..................................................
FD985981       --> GCGGCGAGCGCCG.....................................
EV572500       --> ..................................................

               901    -    951
UN09192        --> CCTCGACGGTGAGCTCGGTGCCGTCCGCGGCGGCGGAGAGTTTCTCCATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY897839       <-- ..................................................
EV567588       <-- ..................................................
FY432876       <-- CCTCGACGGTGAGCTCGGTGCCGTCCGCGGCGGCGGAGAGTTTCTCCATG
EV568286       <-- CCTCGACGGTGAGCTCGGTGCCGTCCGCGGCGGCGGAGAGTTTCTCCATG
EV568895       <-- CCTCGACGGTGAGCTCGGTGCCGTCCGCGGCGGCGGAGAGTTTCTCCATG
EX886588       <-- CCTCGACGGTGAGCTCGGTGCCGTCCGCGGCGGCGGAGAGTTTCTCCATG
EV573048       --> ..................................................
EV573520       --> ..................................................
EX890940       --> ..................................................
FD977778       --> ..................................................
FD985981       --> ..................................................
EV572500       --> ..................................................

               951    -   1001
UN09192        --> AACTCGACCATCTCCTCGTACCTCTCGGCCTGCTCCGAGAGCTTCGCCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY897839       <-- ..................................................
EV567588       <-- ..................................................
FY432876       <-- AACTCCACCATCTCCTCGTACCTCTCGGCCTGCTCCGAGA..........
EV568286       <-- AACTCGACCATCTCCTCGTACCTCTCGGCCTGCTCCGAGAGCTTCGCCAT
EV568895       <-- AACTCGACCATCTCCTCGTACCTCTCGGCCTGCTCCGAGAGCTTCGCCAT
EX886588       <-- AACTCCACCATCTCCTCGTACCTCTCGGCCTGCTCCGAGAGCTTCGCCAT
EV573048       --> ..................................................
EV573520       --> ..................................................
EX890940       --> ..................................................
FD977778       --> ..................................................
FD985981       --> ..................................................
EV572500       --> ..................................................

               1001   -   1051
UN09192        --> GTATACGTACTCGTCGCGCGATGAAACGGCCATTTTGTGATTATCTCAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY897839       <-- ..................................................
EV567588       <-- ..................................................
FY432876       <-- ..................................................
EV568286       <-- GTATACGTACTCGTCGCGCGATGAAACGGCCATTTTGTGATTATCTCAGA
EV568895       <-- GTATACGTACTCGTCGCGCGATGAAACGGCCATTTTGTGATTATCTCAGA
EX886588       <-- GTATACGTACTCGTCGCGCGATGAAACGGCCATTTTGTGATTATCTCAGA
EV573048       --> ..................................................
EV573520       --> ..................................................
EX890940       --> ..................................................
FD977778       --> ..................................................
FD985981       --> ..................................................
EV572500       --> ..................................................

               1051   -   1101
UN09192        --> TCGGAGAGTTTTTTTTTTTTTTTGGTTGTTCGATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY897839       <-- ....................................
EV567588       <-- ....................................
FY432876       <-- ....................................
EV568286       <-- TCGGAGAGTTTTTTTTTTTTTTTGGTTGTTCGATCC
EV568895       <-- TCGGAGAGTTTTTTTTTTTTTTTGGTTGTTCGATCC
EX886588       <-- TCGGAGAGTTTTTTTTTTTTTTTtttggttgttccc
EV573048       --> ....................................
EV573520       --> ....................................
EX890940       --> ....................................
FD977778       --> ....................................
FD985981       --> ....................................
EV572500       --> ....................................