1      -     51
UN09267        --> GGACTTTGGTGACTTCTACTATGCTTGTGGTTTGCTCAATGATGCTTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904417       <-- ..................................................
EX758847       <-- ..................................................
EX766437       <-- ..................................................
EW738729       <-- ..................................................
FD530320       <-- ..................................................
FD558600       --> GGACTTTGGTGACTTCTACTATGCTTGTGGTTTGCTCAATGATGCTTTCA
EX747736       --> ..........................ggGGTTTGCTCAATGATGCTTTCA
FD534362       --> ..................................................
FD549643       --> ..................................................

               51     -    101
UN09267        --> AGAACTATGTTCGAACACGAGACTACTGCACCACCGCAAAGCACATTATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904417       <-- ..................................................
EX758847       <-- ..................................................
EX766437       <-- ..................................................
EW738729       <-- ..................................................
FD530320       <-- ..................................................
FD558600       --> AGAACTATGTTCGAACACGAGACTACTGCACCACCGCAAAGCACATTATT
EX747736       --> AGAACTATGTTCGAACACGAGACTACTGCACCACCGCAAAGCACATTATT
FD534362       --> ..................................................
FD549643       --> ..................................................

               101    -    151
UN09267        --> CACATGTGTATGAACGCCATTCTCGTCAGCATCGAGATGGGACAGTTCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904417       <-- ..................................................
EX758847       <-- ..................................................
EX766437       <-- ..................................................
EW738729       <-- ..................................................
FD530320       <-- ..................................................
FD558600       --> CACATGTGTATGAACGCCATTCTCGTCAGCATCGAGATGGGACAGTCCAG
EX747736       --> CACATGTGTATGAACGCCATTCTCGTCAGCATCGAGATGGGACAGTTCAG
FD534362       --> ..................................................
FD549643       --> ..................................................

               151    -    201
UN09267        --> TCATGTTTCAAGCTACGTGAACAAGGCAGAGCAGAATCCAGAAGCCCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904417       <-- ..................................................
EX758847       <-- ..................................................
EX766437       <-- ..................................................
EW738729       <-- ..................................................
FD530320       <-- ..................................................
FD558600       --> TCATGTTTCAAGCTACGTGAACAAGGCAGAGCAGAATCCAGAAGCCCTTG
EX747736       --> TCATGTTTCAAGCTACGTGAACAAGGCAGAGCAGAATCCAGAAGCCCTTG
FD534362       --> ..................................................
FD549643       --> ..................................................

               201    -    251
UN09267        --> AACCTATTGTAGCTGCTAAACTGCGATGTGCTTCTGGATTGGCTCACTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904417       <-- ..................................................
EX758847       <-- ..................................................
EX766437       <-- ..................................................
EW738729       <-- ..................................................
FD530320       <-- ..................................................
FD558600       --> AACCTATTGTAGCTGCTAAACTGCGATGTGCTTCTGGATTGGCTCACTTG
EX747736       --> AACCTATTGTAGCTGCTAAACTGCGATGTGCTTCTGGATTGGCTCACTTG
FD534362       --> .......................................gGGCTCACTTG
FD549643       --> ..................................................

               251    -    301
UN09267        --> GAGCTGAAAAAGTATAAGCTCGCTGCTCGTAAGTTTCTGGATGTTAGTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904417       <-- .............................TAAGTTT-TGGATGTTAGTCC
EX758847       <-- .......................................GATGTTAGTCC
EX766437       <-- ..................................................
EW738729       <-- ..................................................
FD530320       <-- ..................................................
FD558600       --> GAGCTGAAAAAGTATAAGCTCGCTTCTCGTAAGTTTCTGGATGTTAGTCC
EX747736       --> GAGCTGAAAAAGTATAAGCTCGCTGCTCGTAAGTTTCTGGATGTTAGTCC
FD534362       --> GAGCTGAAAAAGTATAAGCTCGCTGCTCGCAAGTTTCTGGATGTTAGTCC
FD549643       --> ..................................................

               301    -    351
UN09267        --> AGAACTTGGGAATTCATATAACGAGGTCATTGCTCCACAAGACGTTGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904417       <-- AGAACTTGGGAATTCATATAACGAGGTCATTGCTCCACAAGACGTTGCAA
EX758847       <-- AGAACTTGGGAATTCATATAACGAGGTCATTGCTCCACAAGACGTTGCAA
EX766437       <-- ..................................................
EW738729       <-- ..................................................
FD530320       <-- ..................................................
FD558600       --> AGAACTTGGGAATTCATATAACGAGGTCATTGCTCCACAAGACGTTGCAA
EX747736       --> AGAACTTGGGAATTCATATAACGAGGTCATTGCTCCGCAAGACGTTGCAA
FD534362       --> AGAACTTGGGAATTCATATAACGAGGTCATTGCTCCACAAGACGTTGCAA
FD549643       --> ..................................................

               351    -    401
UN09267        --> CCTATGGAGGACTTTGTGCATTGGCTAGCTTTGATCGATCAGAATTGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904417       <-- C-TATGGAGGACTTTGTGCATTGGCTAGCTTTGATCGATCAGAATTGAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX758847       <-- CCTATGGAGGACTTTGTGCATTGGCTAGCTTTGATCGATCAGAATTGAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX766437       <-- .....GGAGGACTTTGTGCATTGGCTAGCTTTGATCGATCAGAATTGAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW738729       <-- ......GAGGACTTTGTGCATTGGCTAGCTTTGATCGATCAGAATTGAAG  Raphanus sativus cv Rat-Tail Radish #3870
FD530320       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD558600       --> CCTATGAAGGACTTTGTGCACTGGCTAGCTTTGATCGATCAGAATTAAAG  Raphanus raphanistrum subsp. landra
EX747736       --> CCTATGGAGGACTTTGTGCACTGGCTAGCTTTGATCGATCAGAATTAAAG  Raphanus raphanistrum subsp. maritimus
FD534362       --> CCTATGGAGGACTTTGTGCACTGGCTAGCTTTGATCGATCAGAATTAAAG  Raphanus raphanistrum subsp. maritimus
FD549643       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               401    -    451
UN09267        --> GCAAAAGTGATTGACAACATCAACTTCAGGGATTTCTTGGAGTTAGTACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904417       <-- GCAAAAGTGATTGGCAACATCAACTTCAGGGATTTCTTGGAGTTAGTACC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX758847       <-- GCAAAAGTGATTGACAACATCAACTTCAGGGATTTCTTGGAGTTAGTACC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX766437       <-- GCAAAAGTGATTGACAACATCAACTTCAGGGATTTCTTGGAGTTAGTACC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW738729       <-- GCAAAAGTGATTGACAACATCAACTTCAGGGATTTCTTGGAGTTAGTACC  Raphanus sativus cv Rat-Tail Radish #3870
FD530320       <-- ..........TTGACAACATCAACTTCAGGGATTTCTTGGAGCTAGTACC  Raphanus raphanistrum subsp. maritimus
FD558600       --> GCAAAAGTGATTGACAACATCAACTTCAGGGATTTCTTGGAGCTAGTACC  Raphanus raphanistrum subsp. landra
EX747736       --> GCAAAAGTGATTGACAACATCAACTTCAGGGATTTCTTGGAGCTAGTACC  Raphanus raphanistrum subsp. maritimus
FD534362       --> GCAAAAGTGATTGACAACATCAACTTCAGGGATTTCTTGGAGCTAGTACC  Raphanus raphanistrum subsp. maritimus
FD549643       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               451    -    501
UN09267        --> CGAAGTGAGGGAACTTATCAACGATTTTTATTCAAGCCGCTATGCTTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904417       <-- CGAAGTGAGGGAACTTATCAACGATTTTTATTCAAGCCGCTATGCTTCCT
EX758847       <-- CGAAGTGAGGGAACTTATCAACGATTTTTATTCAAGCCGCTATGCTTCCT
EX766437       <-- CGAAGTGAGGGAACTTATCAACGATTTTTATTCAAGCCGCTATGCTTCCT
EW738729       <-- CGAAGTGAGGGAACTTATCAACGATTTTTATTCAAGCCGCTATGCTTCCT
FD530320       <-- CGAAGTGAGGTAACTTATCAACGATTTTTATTCAAGCCGCTATGCTTCCT
FD558600       --> CGAAGTGAGGGAACTTATCAACGATTTTTATTCAAGCCGCTATGCTTCCT
EX747736       --> CGAAGTGAGGGAACTTATCAACGATTTTTATTCAAGCCGCTATGCTTCCT
FD534362       --> CGAAGTGAGGTAACTTATCAACGATTTTTATTCAAGCCGCTATGCTTCCT
FD549643       --> ..................................................

               501    -    551
UN09267        --> GTCTTGAGTATCTAGGAAGTCTCAGGGCGAATCTGTTGCTGGACATCCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904417       <-- GTCTTGAGTATCTAGGAAGTCTCAGGGCGAATCTGTTACTGGACATCCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX758847       <-- GTCTTGAGTATCTAGGAAGTCTCAGGGGGAATCTGTTACTGGACATCCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX766437       <-- GTCTTGAGTATCTAGGAAGTCTCAGGGCGAATCTGTTACTGGACATCCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW738729       <-- GTCTTGAGTATCTAGGAAGTCTCAGGGCGAATCTGTTACTGGACATCCAT  Raphanus sativus cv Rat-Tail Radish #3870
FD530320       <-- GTCTGGAGTATCTAGGAAGTCTCAGAGCGAATCTGTTGCTGGACATCCAT  Raphanus raphanistrum subsp. maritimus
FD558600       --> GTCTGGAGTATCTAGGAAGTCTCAGAGCGAATCTGTTGCTGGACATCCAT  Raphanus raphanistrum subsp. landra
EX747736       --> GTCTGGAGTATCTAGGAAGTCTCAGAGCGAATCTGTTGCTGGACATCCAT  Raphanus raphanistrum subsp. maritimus
FD534362       --> GTCTGGAGTATCTAGGAAGTCTCAGAGCGAATCTGTTGCTGGACATCCAT  Raphanus raphanistrum subsp. maritimus
FD549643       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               551    -    601
UN09267        --> CTACATGATCACGTTGACATTCTCTATGATCAGATAAGGAAGAAGGCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904417       <-- CTACATGATCACGTTGACATTCTCTATGATCAGATAAGGAAGAAGGCTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX758847       <-- CTACATGATCACGTTGACATTCTCTATGATCAGATAAGGAAGAAGGCTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX766437       <-- CTACATGATCACGTTGACATTCTCTATGATCAGATAAGGAAGAAGGCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW738729       <-- CTACATGATCACGTTGACATTCTCTATGATCAGATAAGGAAGAAGGCTCT  Raphanus sativus cv Rat-Tail Radish #3870
FD530320       <-- CTACATGATCACGTTGACATTCTCTATGATCAGATAAGGAAGAAGGCTCT  Raphanus raphanistrum subsp. maritimus
FD558600       --> CTACATGATCACGTTGACATTCTCTATGATCAGGTAAGGAAGAAGGCTCT  Raphanus raphanistrum subsp. landra
EX747736       --> CTACATGATCACGTTGGCATTCTCTATGATCAGATAAGGAAGAAGGCTCT  Raphanus raphanistrum subsp. maritimus
FD534362       --> CTACATGATCACGTTGACATTCTCTATGATCAGATAAGGAAGAAGGCTCT  Raphanus raphanistrum subsp. maritimus
FD549643       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               601    -    651
UN09267        --> TATTCAGTACACGCTGCCATTTGTGTCTGTTGATTTGAGCAGGATGGCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904417       <-- AATTCAGTACACGCTGCCATTTGTGTCTGTTGATTTGAGCAGGATGGCCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX758847       <-- AATTCAGTACACGCTGCCATTTGTGTCTGTTGATTTGAGCAGGATGGCCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX766437       <-- AATTCAGTACACGCTGCCACTTGTGTCTGTTGATTTGAGCAGGATGGCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW738729       <-- AATTCAGTACACGCTGCCATTTGTGTCTGTTGATTTGAGCAGGATGGCCG  Raphanus sativus cv Rat-Tail Radish #3870
FD530320       <-- TATTCAGTACACGCTGCCATTTGTGTCTGTTGATTTGAGCAGGATGGCCG  Raphanus raphanistrum subsp. maritimus
FD558600       --> TATTCAGTACGCGCTGCCATTTGTGTCTGTTGATTTGAGCAG-ATGGCCG  Raphanus raphanistrum subsp. landra
EX747736       --> TATTCAGTACACGCTGCCATTTGTGTCTGTTGATTTGAGCAGGATGGCCG  Raphanus raphanistrum subsp. maritimus
FD534362       --> TATTCAGTACACGCTGCCATTTGTGTCTGTTGATTTGAGCAGGATGGCCG  Raphanus raphanistrum subsp. maritimus
FD549643       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               651    -    701
UN09267        --> ATGCGTTCAAGACGAGTGTCTCTGGTCTAGAGAAGGAACTGGAAGCCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904417       <-- ATGCGTTCAAGACGAGTGTCTCTGGTCTAGAGAAGGAACTGGAAGCCTTG
EX758847       <-- ATGCGTTCAAGACGAGTGTCTCTGGTCTAGAGAAGGAACTGGAAGCCTTG
EX766437       <-- ATGCGTTCAAGACGAGTGTCTCTGGTCTAGAGAAGGAACTGGAAGCCTTG
EW738729       <-- ATGCGTTCAAGACGAGTGTCTCTGGTCTAGAGAAGGAACTGGAAGCCTTG
FD530320       <-- ATGCGTTCAAGACGAGTGTCTCTGGTCTAGAGAAGGAACTGGAAGCCTTG
FD558600       --> ATGCGTTCAAGACGAGTGTCTCTGGTCTAGAGAAG-AACTGGAAGCCTTG
EX747736       --> ATGCGTTCAAGACGAGTGTCTCTGGTCTAGAGAATGAACTGGAAGCCTTG
FD534362       --> ATGCGTTCAAGACGAGTGTCTCTGGTCTAGAGAAGGAACTGGAAGCCTTG
FD549643       --> ..............................gGAAGGAACTAGAAGCCTTG

               701    -    751
UN09267        --> ATAACAGACAACCAAATACAGGCACGGATTGATTCACACAACAAAATCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904417       <-- ATAACAGACAACCAAATACAGGCACGGATTGATTCACACAACAAAATCCT
EX758847       <-- ATAACAGACAACCAAATACAGGCACGGATTGATTCACACAACAAAATCCT
EX766437       <-- ATAACAGACAACCAAATACAGGCACGGATTGATTCACACAACAAAATCCT
EW738729       <-- ATAACAGACAACCAAATACAGGCACGGATTGATTCACACAACAAAATCCT
FD530320       <-- ATAACAGACAACCAAATACAGGCACGGATTGATTCACACAACAAAATCCT
FD558600       --> ATAACAGACAACCAAATACAGGCACGGATTGATTCACACAACA.......
EX747736       --> ATAACAGACAACCAAATA................................
FD534362       --> ATAACAGACAACCAAATACAGGCACGGATTGATTCACACAACAAAATCCT
FD549643       --> ATAACAGACAACCAAATACAGGCACGGATTGATTCACACAACAAAATCCT

               751    -    801
UN09267        --> CTATGCAAGGCACGCGGATCAGAGGAATGCAACTTTCCAAAAGGTGCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904417       <-- CTATGCAAGGCACGCGGATCAGAGGAATGCAACTTTCCAAAAGGTGCTTC
EX758847       <-- CTATGCAAGGCACGCGGACCAGAGGAATGCAACTTTCCAAAAGGTGCTTC
EX766437       <-- CTATGCAAGGCACGCGGATCAGAGGAATGCAACTTTCCAAAAGGTGCTTC
EW738729       <-- CTATGCAAGGCACGCGGATCAGAGGAATGCAACTTTCCAAAAGGTGCTTC
FD530320       <-- CTATGCAAGGCACGCGGATCAGAGGAATGCAACTTTCCAAAAGGTGCTTC
FD558600       --> ..................................................
EX747736       --> ..................................................
FD534362       --> CTATGCAAGGCACGCGGATCAGAGGAATGCAACTTTCCAAAAGGTGCTTC
FD549643       --> CTATGCAAGGCACGCGGATCAGAGGAATGCAACTTTCCAAAAGGTGCTTC

               801    -    851
UN09267        --> AGATGGGTAACGAGTTCGATAGGGATGTCAGGTCAATGATGTTGAGAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904417       <-- AGATGGGTAACGAGTTCGATAGGGATGTCAGGTCAATGATGTTGAGAGCC
EX758847       <-- AGATGGGTAACGAGTTCGATAGGGATGTCAGGTCAATGATGTTGAGAGCC
EX766437       <-- AGATGGGTAACGAGTTCGATAGGGATGTCAGGTCAATGATGTTGAGAGCC
EW738729       <-- AGATGGGTAACGAGTTCGATAGGGATGTCAGGTCAATGATGTTGAGAGCC
FD530320       <-- AGATGGGTAACGAGTTCGATAGGGATGTCAGGTCAATGATGTTGAGAGCC
FD558600       --> ..................................................
EX747736       --> ..................................................
FD534362       --> AGATGGGTAACGAGTTCGATAGGGATGTCAGGTCAATGATGTTGAGAGCC
FD549643       --> AGATGGGTAACGAGTTCGATAGGGATGTCAGGTCAATGATGTTGAGAGCC

               851    -    901
UN09267        --> AACCTTCTTAAGCATGAGTACCATGCCAGAGCTGGAAGAAACCATTGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904417       <-- AACCTTCTTAAGCATGAGTACCATGCCAGAGCTGTAAGAAACCATTGAGA
EX758847       <-- AACCTTCTTAAGCATGAGTACCATGCCAGAGCTGGAAGAAACCATTGAGA
EX766437       <-- AACCTTCTTAAGCATGAGTACCATGCCAGAGCTGGAAGAAACCATTGAGA
EW738729       <-- AACCTTCTTAAGCATGAGTACCATGCCAGAGCTGGAAGAAACCATTGAGA
FD530320       <-- AACCTTCTTAAACATGAGTACCATGCCAGAGCTGGAAGAAACCATTGAGA
FD558600       --> ..................................................
EX747736       --> ..................................................
FD534362       --> AATCTTCTTAAACATGAGTACCA...........................
FD549643       --> AACCTTCTTAAGCATGAGTACCATGCCAGAGCTGGAAGAAACCATTGAGA

               901    -    951
UN09267        --> TGGACTTCTTGTGCTTGGCTAACCCGAGAGGCACTGGTCTATTCCAAGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904417       <-- TGGACTTCTTGTGCTTGGCTAACCCGAGAGGCACTGGTCTATTCCAAGGT
EX758847       <-- TGGACTTCTTGTGCTTGGCTAACCCGAGAGGCACTGGTCTATTCCAAGGT
EX766437       <-- TGGACTTCTTGTGCTTGGCTAACCCGAGAGGCACTGGTCTATTCCAAGGT
EW738729       <-- TGGACTTCTTGTGCTTGGCTAACCCGAGAGGCACTGGTCTATTCCAAGGT
FD530320       <-- TGGACTTCTTCCGCTTGGCTAACCCGAGAGGCACTGGTCTATTCCAAGGT
FD558600       --> ..................................................
EX747736       --> ..................................................
FD534362       --> ..................................................
FD549643       --> TGGACTTCTTGTGCTTGGCTAACCCGAGAGGCACTGGTCTATTCCAAGGT

               951    -   1001
UN09267        --> CATATACGTTTATGAAAGATTCCTTTGGTTTTAGTTGTTTGTTAGATATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904417       <-- CATATACGTTTATGAAAGATTCCTTTGGTTTTAGTTGTTTGTTAGATATG
EX758847       <-- CATATACGTTTATGAAAGATTCCTTTGGTTTTAGTTGTTTGTTAGATATG
EX766437       <-- CATATACGTTTATGAAAGATTCCTTTGGTTTTAGTTGTTTGTTAGATATG
EW738729       <-- CATATACGTTTATGAAAGATTCCTTTGGTTTTAGTTGTTTGTTAGATATG
FD530320       <-- CATATACGTTTATGAAAGATTCCTTTGGTTTTAGTTGTTTGTTAGATATG
FD558600       --> ..................................................
EX747736       --> ..................................................
FD534362       --> ..................................................
FD549643       --> CATATACGTTTATGAAAGATTCCTTTGGTTTTAGTTGTTTGTTAGATATG

               1001   -   1051
UN09267        --> TCTAGACAATCATCTATGCTCTCTTGTTACTGCTTTTGTTTTCTTGACTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904417       <-- TCTAGACAATCATCTATGCTCTCTTGTTACTGCTTTTGTTTTCTTGACTT
EX758847       <-- TCTAGACAATCATCTATGCTCTCTTGTTACTGCT................
EX766437       <-- TCTAGACAATCATCTATGCTCTCTTGTTACTGCTTTTGTTTTCTTGACTT
EW738729       <-- TCTAGACAATCATCTATGCTCTCTTGTTACTGCTTTTGTTTTCTTGACTT
FD530320       <-- TCTAGACAATCATCTCTGCTCTATTGTTACTGCTTTTGTTTTCTCGACTT
FD558600       --> ..................................................
EX747736       --> ..................................................
FD534362       --> ..................................................
FD549643       --> TCTAGACAATCATCTATGCTCTCTTGTTACTGCTTTTGTTTTCTTGACTT

               1051   -   1101
UN09267        --> TTAATTTTTATGCTTCTTTGAAGTACCAATCATTGGACTTTGAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY904417       <-- TTAATTTTTATGCTTCTTTGAA........................
EX758847       <-- ..............................................
EX766437       <-- TTAATTTTTATGCTTCTTTGAAGTACC...................
EW738729       <-- TTAATTTTTATGCTTCTTTGAAGTACCAATCATTGGACTTTGAACC
FD530320       <-- TTAATTCTTAAGCTTCTTTGAAGTACC...................
FD558600       --> ..............................................
EX747736       --> ..............................................
FD534362       --> ..............................................
FD549643       --> TTAATTTTTATGCTTCTTTGAAGTACCAATCATTGGACTTTGAACC