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Alignment for radish unigene UN09327

               1      -     51
UN09327        --> GGAAGCAAAGCCATTTCCCTCTTGTGCCGTGCCGTCGCCGTCTCCGTCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX760750       <-- .GAAGCAAAGCCATTTCCCTCTTGTGCCGTGCCGTCGCCGTCTCCGTCGC
FD529896       <-- ..................................................
FD539659       <-- ..................................................
EV569716       --> GGAAGCTAATCCATTTCCCTCTTGTTCCGTGCCGTCGCCGTCTCCGTCGC
EX757081       --> .GAAGCAAAGCCATTTCCCTCTTGTGCCGTGCCGTCGCCGTCTCCGTCGC
EV535595       --> .............TTTCCCTCTTGTGCCGTGCCGTCGCCGTCTCCGTCGC
FD543943       --> .....................ggGTGCCGTGCCGTCGCCGTCTCCGTCGC
FD963396       --> .....................ggGTGCCGTGCCGTCGCCGTCTCCGTCGC
FD533813       --> ........................................agggCGTCGC

               51     -    101
UN09327        --> CATTTCACTAACCGTCATATCCGGCCACCATTTTCAACTGTCGCTATCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX760750       <-- CATTTCACTAACCGTCATATCCGGCCACCATTTTCAACTGTCGCTATCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD529896       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD539659       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV569716       --> CAATTCTCTAACCGTCGTATCCGGTCACCATTTTCAACTGTCGCTGTCTA  Raphanus raphanistrum subsp. landra
EX757081       --> CATTTCACTAACCGTCATATCCGGCCACCATTTTCAACTGTCGCTATCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535595       --> CATTTCACTAACCGTCATATCCGGCCACCATTTTCAACTGTCGCTATCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD543943       --> CATTTCACTAACCGTCATATCCGGCCACCATTTTCAACTGTCGCTATCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD963396       --> CATTTCTCTAACCGTCATATCCGGTCACCATTTTCAACTGTCACTATCTA  Raphanus raphanistrum subsp. maritimus
FD533813       --> CATTTCTCTAACCGTCATATCCGGTCACCATTTTCAACTGTCACTATCTA  Raphanus raphanistrum subsp. maritimus

               101    -    151
UN09327        --> CTGTAATCGAAAATTTCCGAATCCGAAGAAAATGAATTTCTTCAACTCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX760750       <-- CTGTAATCGAAAATTTCCGAATCCGAAGAAAATGAATTTCTTCAACTCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD529896       <-- ...........................................AACTCAG  Raphanus raphanistrum subsp. maritimus
FD539659       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV569716       --> CTGTAATCGAAAATTTCGGAATCTGAAGAAAATGAATTTCTTCAACTCAG  Raphanus raphanistrum subsp. landra
EX757081       --> CTGTAATCGAAAATTTCCGAATCCGAAGAAAATGAATTTCTTCAACTCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535595       --> CTGTAATCGAAAATTTCCGAATCCGAAGAAAATGAATTTCTTCAACTCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD543943       --> CTGTAATCGAAAATTTCCGAATCCGAAGAAAATGAATTTCTTCAACTCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD963396       --> CTGTAATCGAAAATTTCGGAATCTGAAGAAAATGAATTTCTTCAACTCAG  Raphanus raphanistrum subsp. maritimus
FD533813       --> CTGTAATCGAAAATTTCGGAATCTGAAGAAAATGAATTTCTTCAACTCAG  Raphanus raphanistrum subsp. maritimus

               151    -    201
UN09327        --> CAGCGTCCTTATGCAGAAGAGTTAGTCTGAGGGAACTCATCACCGAGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX760750       <-- CAGCATCCTTATGCAGAAGAGTTAGTCTGAGGGAACTCATCACCGAGGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD529896       <-- CAGCGTCCTTATGCAGAAGAGTTAGTCTGAGGGAACTCATCACCGAGGTT  Raphanus raphanistrum subsp. maritimus
FD539659       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV569716       --> CAGCGTCCTTATGCAGAAGAGTTAGTCTGAGGGAACTCATCACCGAGGTT  Raphanus raphanistrum subsp. landra
EX757081       --> CAGCATCCTTATGCAGAAGAGTTAGTCTGAGGGAACTCATCACCGAGGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535595       --> CAGCATCCTTATGCAGAAGAGTTAGTCTGAGGGAACTCATCACCGAGGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD543943       --> CAGCATCCTTATGCAGAAGAGTTAGTCTGAGGGAACTCATCACCGAGGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD963396       --> CAGCGTCCTTATGCAGAAGAGTTAGTCTGAGGGAACTCATCACCGAGGTT  Raphanus raphanistrum subsp. maritimus
FD533813       --> CAGCGTCCTTATGCAGAAGAGTTAGTCTGAGGGAACTCATCACCGAGGTT  Raphanus raphanistrum subsp. maritimus

               201    -    251
UN09327        --> CCTGCTTACGGTGGCAGTGGCATTTCCGATTGTTCTTCAAGTGGGTTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX760750       <-- CCTGCTTACGGTGGCAGTGGCATTTCCGATGGTTCTTCAAGTGGGTTGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD529896       <-- CCTGCTTACGGTGGCAGTGGCATTTCCGATTGTTCTTCAAGTGGGTTGAG  Raphanus raphanistrum subsp. maritimus
FD539659       <-- .......................................AGTGGGTTGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV569716       --> CCTGCTTACGGTGGCAGTGGCATTTCCGATTGTTCTTCAAGTGGGTTGAG  Raphanus raphanistrum subsp. landra
EX757081       --> CCTGCTTACGGTGGCAGTGGCATTTCCGATGGTTCTTCAAGTGGGTTGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535595       --> CCTGCTTACGGTGGCAGTGGCATTTCCGATGGTTCTTCAAGTGGGTTGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD543943       --> CCTGCTTACGGTGGCAGTGGCATTTCCGATGGTTCTTCAAGTGGGTTGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD963396       --> CCTGCTTACGGTGGCAGTGGCATTTCCGATTGTTCTTCAAGTGGGTTGAG  Raphanus raphanistrum subsp. maritimus
FD533813       --> CCTGCTTACGGTGGCAGTGGCATTTCCGATTGTTCTTCAAGTGGGTTGAG  Raphanus raphanistrum subsp. maritimus

               251    -    301
UN09327        --> TTTGGTCTTTAAGCGTTGGGCTACTAAGAAAACCGCTGGTTCCACCAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX760750       <-- TTTGGTCTTTAAGCGTTGGGCTACTAAGAAAACCGCTGGTTCCACCAAGA
FD529896       <-- TTTGGTCTTTAAGCGTTGGGCTACTAAGAAAACCGCTGGTTCCACCAAGA
FD539659       <-- TTTGGTCTTTAAGCGTTGGGCTACTAAGAAAACCGCTGGTTCCACCAAGA
EV569716       --> TTTGGTCTTTAAGCGTTGGGCTACTAAGAAAACCGCTGGTTCCACCAAGA
EX757081       --> TTTGGTCTTTAAGCGTTGGGCTACTAAGAAAACCGCTGGTTCCACCAAGA
EV535595       --> TTTGGTCTTTAAGCGTTGGGCTACTAAGAAAACCGCTGGTTCCACCAAGA
FD543943       --> TTTGGTCTTTAAGCGTTGGGCTACTAAGAAAACCGCTGGTTCCACCAAGA
FD963396       --> TTTGGTCTTTAAGCGTTGGGCTACTAAGAAAACCGCTGGTTCCACCAAGA
FD533813       --> TTTGGTCTTTAAGCGTTGGGCTACTAAGAAAACCGCTGGTTCCACCAAGA

               301    -    351
UN09327        --> ACGGTCGTGACTCCAAACCCAAGAATCTCGGCGTCAAGAAGTTCGGAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX760750       <-- ACGGTCGTGACTCCAAACCCAAGAATCTCGGCGTCAAGAAGTTCGGAGGA
FD529896       <-- ACGGTCGTGACTCCAAACCCAAGAATCTCGGC-TCAAGAAGTTCGGAGGA
FD539659       <-- ACGGTCGTGACTCCAAACCCAAGAATCTCGGCGTCAAGAAGTTCGGAGGA
EV569716       --> ACGGTCGTGACTCCAAACCCAAGAATCTCGGCGTCAAGAAGTTCGGAGGA
EX757081       --> ACGGTCGTGACTCCAAACCCAAGAATCTCGGCGTCAAGAAGTTCGGAGGA
EV535595       --> ACGGTCGTGACTCCAAACCCAAGAATCTCGGCGTCAAGAAGTTCGGAGGA
FD543943       --> ACGGTCGTGACTCCAAACCCAAGAATCTCGGCGTCAAGAAGTTCGGAGGA
FD963396       --> ACGGTCGTGACTCCAAACCCAAGAATCTCGGCGTCAAGAAGTTCGGAGGA
FD533813       --> ACGGTCGTGACTCCAAACCCAAGAATCTCGGC-TCAAGAAGTTCGGAGGA

               351    -    401
UN09327        --> GAGAATGTGATACCGGGAAACATAATAGTCCGTCAACGCGGAACTAGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX760750       <-- GAGAATGTGATACCGGGAAACATAATAGTCCGTCAACGCGGAACTAGGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD529896       <-- GAGAATGTGATACCTGGAAACATAATAGTGCGTCAACGCGGAACTAGGTT  Raphanus raphanistrum subsp. maritimus
FD539659       <-- GAGAATGTGATACCGGGAAACATAATAGTCCGTCAACGCGGAACTAGGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV569716       --> GAGAATGTGATACCTGGAAACATAATAGTGCGTCAACGCGGAACTAGGTT  Raphanus raphanistrum subsp. landra
EX757081       --> GAGAATGTGATACCGGGAAACATAATAGTCCGTCAACGCGGAACTAGGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535595       --> GAGAATGTGATACCGGGAAACATAATAGTCCGTCAACGCGGAACTAGGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD543943       --> GAGAATGTGATACCGGGAAACATAATAGTCCGTCAACGCGGAACTAGGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD963396       --> GAGAATGTGATACCTGGAAACATAATAGTGCGTCAACGCGGGACTAGGTT  Raphanus raphanistrum subsp. maritimus
FD533813       --> GAGAATGTGATACCTGGAAACATAATAGTGCGTCAACGCGGAACTAGGTT  Raphanus raphanistrum subsp. maritimus

               401    -    451
UN09327        --> TCATCCGGGAGACTATGTGGGGATCGGGAAGGACCATACGCTGTTTGCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX760750       <-- TCATCCGGGAGACTATGTGGGGATCGGGAAGGACCATACGCTGTTTGCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD529896       <-- TCATCCGGGAGACTATGTCGGGATCGGGAAGGACCATACGCTGTTTGCAT  Raphanus raphanistrum subsp. maritimus
FD539659       <-- TCATCCGGGAGACTATGTGGGGATCGGGAAGGACCATACGCTGTTTGCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV569716       --> TCATCCGGGAGACTATGTCGGGATCGGGAAGGACCATACGCTGTTTGCAT  Raphanus raphanistrum subsp. landra
EX757081       --> TCATCCGGGAGACTATGTGGGGATCGGGAAGGACCATACGCTGTTTGCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535595       --> TCATCCGGGAGACTATGTGGGGATCGGGAAGGACCATACGCTGTTTGCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD543943       --> TCATCCGGGAGACTATGTGGGGATCGGGAAGGACCATACGCTGTTTGCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD963396       --> TCATCCGGGAGACTATGTCGGGATCGGGAAGGACCATACGCTGTTTGCAT  Raphanus raphanistrum subsp. maritimus
FD533813       --> TCATCCGGGAGACTATGTCGGGATCGGGAAGGACCATACGCTGTTTGCAT  Raphanus raphanistrum subsp. maritimus

               451    -    501
UN09327        --> TGAAAGAAGGACGAGTCAGGTTCGAGAAAAACAAGATAACTGGACGTAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX760750       <-- TGAAAGAAGGACGAGTCAGGTTCGAGAAAAACAAGATAACTGGACGTAAA
FD529896       <-- TGAAAGAAGGACGAGTCAGGTTCGAGAAAAACAAGATAACTGGACGTAAA
FD539659       <-- TGAAAGAAGGACGAGTCAGGTTCGAGAAAAACAAGATAACTGGACGTAAA
EV569716       --> TGAAAGAAGGACGAGTCAGGTTCGAGAAAAACAAGATAACTGGACGTAAA
EX757081       --> TGAAAGAAGGACGAGTCAGGTTCGAGAAAAACAAGATAACTGGACGTAAA
EV535595       --> TGAAAGAAGGACGAGTCAGGTTCGAGAAAAACAAGATAACTGGACGTAAA
FD543943       --> TGAAAGAAGGACGAGTCAGGTTCGAGAAAAACAAGATAACTGGACGTAAA
FD963396       --> TGAAAGAAGGACGAGTCAGGTTCGAGAAAAACAAGATAACTGGACGTAAA
FD533813       --> TGAAAGAAGGACGAGTCAGGTTCGAGAAAAACAAGATAACTGGACGTAAA

               501    -    551
UN09327        --> TGGATTCATGTTGATCCTAAGGGAGGTCATGTTCTTCACCCTATCTACAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX760750       <-- TGGATTCATGTTGATCCTAAGGGAGGTCATGTTCTTCACCCTATCTACAC
FD529896       <-- TGGATTCATGTTGATCCTAAGGGAGGTCATGTTCTTCACCCTATCTACAC
FD539659       <-- TGGATTCATGTTGATCCTAAGGGAGGTCATGTTCTTCACCCTATCTACAC
EV569716       --> TGGATTCATGTTGATCCTAAGGGAGGTCATGTTCTTCACCCTATCTACAC
EX757081       --> TGGATTCATGTTGATCCTAAGGGAGGTCATGTTCTTCACCCTATCTACAC
EV535595       --> TGGATTCATGTTGATCCTAAGGGAGGTCATGTTCTTCACCCTATCTACAC
FD543943       --> TGGATTCATGTTGATCCTAAGGGAGGTCATGTTCTTCACCCTATCTACAC
FD963396       --> TGGATTCATGTTGATCCTAAGGGAGGTCATGTTCTTCACCCTATCTACAC
FD533813       --> TGGATTCATGTTGATCCTAAGGGAGGTCATGTTCTTCACCCTATCTACAC

               551    -    601
UN09327        --> TAGAGCTGCAGCCGCCAAGTCGACTGAGCTAGAGACAGCTTCTTCGTCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX760750       <-- TAGAGCTGCCGCCGCCAAGTCGACTGAGCTAGAGACAGCTTTTTCGTCGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD529896       <-- TAGAGCTGCAGCCGCCAAGTCGACTGAGCTAGAGACAGCTTCTTCGTCGT  Raphanus raphanistrum subsp. maritimus
FD539659       <-- TAGAGCTGCTGCCGCCAAGTCGACTGAGCTAGAGACAGCTTTTTCGTCGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV569716       --> TAGAGCTGCAGCCGCCAAGTCGACTGAGCTAGAGACAGCTTCTTCGTCGT  Raphanus raphanistrum subsp. landra
EX757081       --> TAGAGCTGCCGCCGCCAAGTCGACTGAGCTAGAGACAGCTTCTTCGTCGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535595       --> TAGAGCTGCTGCCGCCAAGTCGACTGAGCTAGAGACAGCTTCTTCGTCGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD543943       --> TAGAGCTGCTGCCGCCAAGTCGACTGAGCTAGAGACAGCTTCTTCGTCGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD963396       --> TAGAGCTGCAGCCGCCAAGTCGACTGAGCTAGAGACAGCTTCTTCGTC..  Raphanus raphanistrum subsp. maritimus
FD533813       --> TAGAGCTGCAGCCGCCAAGTCGACTGAGCTAGAGACAGCTTCTTCGTCGT  Raphanus raphanistrum subsp. maritimus

               601    -    651
UN09327        --> GAAAAAAA-CAAATCTAAAAGTGTCTTCTTTTGTTAGATCATACGATCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX760750       <-- GAAAAAAA-CAAATCTAAAAGTGTCTTCTTTTGTTAGATCATACGATCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD529896       <-- GAAAAAAAACAAAGCTAAAAGTGTCTTCTTTTGTTAGATCATACGATCAC  Raphanus raphanistrum subsp. maritimus
FD539659       <-- GAAAAAAA-CAAATCTAAAAGTGTCTTCTTTTGTTAGATCATACGATCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV569716       --> GAAAAAAA-CAAAGCTAAAAGTGTCTTCTTTTGCTAGATCATACGATCAC  Raphanus raphanistrum subsp. landra
EX757081       --> GAAAAAA--CAAATCTAAAAGTGTCTTCTTTTGTTAGATCATACGATCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535595       --> GAAAAAAA-CAAATCTAAAAGTGTCTTCTTTTGTTAGATCATACGATCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD543943       --> GAAAAAAA-CAAATCTAAAAGTGTCTTCTTTTGTTAGATCATACGATCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD963396       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD533813       --> GAAAAAAA-CAAAGCTAAAAGTGTCTTCTTTTGTTAGATCATACGATCAC  Raphanus raphanistrum subsp. maritimus

               651    -    701
UN09327        --> TTTTGACTACAAAGCTGGTTGTGTCTTAGAACAGCAACACTCAATTGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX760750       <-- TTTTGACTACAAAGCTGGTTGTGTCTTAGAACAGCAACACTCAATTGAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD529896       <-- TTTTGACTACAAAGCTGGTTGTGTCTTAGAACAGCAACACTAAGTTGAAT  Raphanus raphanistrum subsp. maritimus
FD539659       <-- TTTTGACTACAAAGCTGGTTGTGTCTTAGAGCAGCAACACTCAATTGAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV569716       --> TTTTGACTACAAAGCTGGTTGTGTCTTAGAACAGCAACACTAAGTTGAAT  Raphanus raphanistrum subsp. landra
EX757081       --> TTTTGACTACAAAGCTGGTTGTGTCTTAGAACAGCAACACTCAATTGA-T  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535595       --> TTTTGACTACAAAGCTGGTTGTGTCTTAGAACAGCAACACTCAATTGAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD543943       --> TTTTGACTACAAAGCTGGTTGTGTCTTAGAGCAGCAACACTCAATTGAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD963396       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD533813       --> TTTTGACTACAAAGCTGGTTGTGTCTTAGAACAGCAACACTAAGTTGAAT  Raphanus raphanistrum subsp. maritimus

               701    -    751
UN09327        --> AACATATGCTGTTTTGTTTTTGTCTTTGTCTGGAGACTCCGGATACTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX760750       <-- AACATATGCTGTTTTGTT................................
FD529896       <-- AACATATGCTGTTTTGTTTTTGTCTTTGTCTGGAGACTCCGGATACTGAT
FD539659       <-- AACATATGCTGTTTTGTTTTTGTCTTTGTCTGGAGACTCCGGATACTGAT
EV569716       --> AACATATGCTGTTTTGTTTTTGTCTTTGTCTGGAGACTCCGGATACTGAT
EX757081       --> AACATATGCTGTTTgtt.................................
EV535595       --> AACATATGCTGTTTTGTTTTTGTCTTTGTCTGGAGACTCCGGATACTGAT
FD543943       --> AACATATGCTGTTTTGTTTTTGTCTTTGTCTGGAGACTCCGGATACTGAT
FD963396       --> ..................................................
FD533813       --> AACATATGC.........................................

               751    -    801
UN09327        --> CATTCAAAGCAAAATAAGTTCTCTAGAAGATTGTCAACTTTTTTTTTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX760750       <-- ..................................................
FD529896       <-- CATTCAAAGCAAAATAAGTTCTCCAGAAGATTGTCAGCTTTTTTTTTTCT
FD539659       <-- CATTCAAAGCAAAATAAGTTCTCTAGAAGATTGTCAACTTTTTTTTTTCT
EV569716       --> CATTCAA-GCAAA.....................................
EX757081       --> ..................................................
EV535595       --> CATTCAAAGCAAA-TAAGTTCTCc..........................
FD543943       --> CATTCAA-GCAAA-TAAGTTCTCTAGAAGAT-GTCAACTTTTTTTTTc..
FD963396       --> ..................................................
FD533813       --> ..................................................

               801    -    851
UN09327        --> CTCTTGTTTTTATTTAATGTCTCAAACTTCTAAAAAATCTTGCAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX760750       <-- ..............................................
FD529896       <-- CTCTTGTTTTTATTTAATGTCTCAAACTTCTAAAAAATCTTGCAAT
FD539659       <-- CTCTTGTTTTTATTTAATGTCTCAAACTTCc...............
EV569716       --> ..............................................
EX757081       --> ..............................................
EV535595       --> ..............................................
FD543943       --> ..............................................
FD963396       --> ..............................................
FD533813       --> ..............................................