Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN09376

               1      -     51
UN09376        --> GGTATTAAATAAAATGCATTGCAATATGATTACATTAATCTGATCAATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD559702       <-- GGTATTAAATAAAATGCAATGCAATATGATTACATTAATCTGATCAATTA  Raphanus raphanistrum subsp. landra
EV547945       <-- ...........AAATGCAATGCAATATGATTACATTAATCTGATCAATTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD948617       <-- ...............GCATTGCAATATGATTACATTAATCTGATCAATTA  Raphanus sativus cv Early Scarlet Globe
EY938689       <-- ...............gtATTGCAATATGATTACATTAATCTGATCAATTA  Raphanus sativus cv Early Scarlet Globe
EV550446       <-- ...............................gCATGAATCTGATCAATTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW713561       <-- ...............................gCATTAATCTGATCAATTA  Raphanus sativus var. oleiformis
EW713562       <-- ...............................gCATTAATCTGATCAATTA  Raphanus sativus var. oleiformis
EW715598       <-- ..................................................  Raphanus sativus var. oleiformis
EV548798       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD937642       <-- ..................................................  Raphanus sativus var. oleiformis
EY941002       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX765496       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD945977       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD555363       --> GGTATTAAATAAAATGCAATGCAATATGATTACATTAATCTGATCAATTA  Raphanus raphanistrum subsp. landra
FD944374       --> ...............GCATTGCAATATGATTACATTAATCTGATCAATTA  Raphanus sativus cv Early Scarlet Globe
EY934760       --> ...............gtATTGCAATATGATTACATTAATCTGATCAATTA  Raphanus sativus cv Early Scarlet Globe
EV545743       --> ...............................gCATGAATCTGATCAATTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720276       --> ..................................................  Raphanus sativus var. oleiformis
FD934217       --> ..................................................  Raphanus sativus var. oleiformis
EY936664       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD942183       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW727816       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               51     -    101
UN09376        --> CATATATAATATTTCCAGCAACAAATTCAACAAGCGAAGCATATAGTTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD559702       <-- CATATATAATATTTCCAGCAACAAATTCAACAAGCGAAGCATATAGTTAA
EV547945       <-- CATATATAATATTTCCAGCAACAAATTCAACAAGCGAAGCATATAGTTAA
FD948617       <-- CATATATAATATTTCCAGCAACAAATTCAACAAGCGAAGCATATAGTTAA
EY938689       <-- CATATATAATATTTCCAGCAACAAATTCAACAAGCGAAGCATATAGTTAA
EV550446       <-- CATATATAATATTTCCAGCAACAAATTCAACAAGCGAAGCATATAGTTAA
EW713561       <-- CATATATAATATTTCCAGCAACAAATTCAACAAGCAAAGCACATAGTTAA
EW713562       <-- CATATATAATATTTCCAGCAACAAATTCAACAAGCAAAGCACATAGTTAA
EW715598       <-- CATATATAATATTTCCAGCAACAAATTCAACAAGCGAAGCATATAGTTAA
EV548798       <-- ..........ATTTCCAGCAACAAATTCAACAAGCGAAGCATATAGTTAA
FD937642       <-- ...........................CAACAAGCGAAGCATATAGTTAA
EY941002       <-- .................................GCGAAGCATATAGTTAA
EX765496       <-- ................................................AA
FD945977       <-- ................................................AA
FD555363       --> CATATATAATATTTCCAGCAACAAATTCAACAAGCGAAGCATATAGTTAA
FD944374       --> CATATATAATATTTCCAGCAACAAATTCAACAAGCGAAGCATATAGTTAA
EY934760       --> CATATATAATATTTCCAGCAACAAATTCAACAAGCGAAGCATATAGTTAA
EV545743       --> CATATATAATATTTCCAGCAACAAATTCAACAAGCGAAGCATATAGTTAA
EW720276       --> CATATATAATATTTCCAGCAACAAATTCAACAAGCGAAGCATATAGTTAA
FD934217       --> ...........................CAACAAGCGAAGCATATAGTTAA
EY936664       --> .................................GCGAAGCATATAGTTAA
FD942183       --> ................................................AA
EW727816       --> ..................................................

               101    -    151
UN09376        --> CATAATCTGGTCATTACATTTAAATATTAAGCAATCTTTGAAGAGAAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD559702       <-- CATAATCTGGTCATTACATTTAAATATTAAGCAATCTTTGAAGAGAAAAC
EV547945       <-- GATAATCTGGTCATTACATTTAAATATTAAGCAATCTTTGAAGAGAAAAC
FD948617       <-- CATAATCTGGTCATTACATTTAAATATTAAGCAATCTTTGAAGAGAAAAC
EY938689       <-- CATAATCTGGTCATTACATTTAAATATTAAGCAATCTTTGAAGAGAAAAC
EV550446       <-- CATAATCTGGTCATTACATTTAAGTATTAAGCAATCTTTGAAGGGAAAAC
EW713561       <-- CATAATCTGGTCATTACATTTAAATATTAAGCAATCTTTGAAGAGAAAAC
EW713562       <-- CATAATCTGGTCATTACATTTAAATATTAAGCAATCTTTGAAGAGAAAAC
EW715598       <-- CATAATCTGGTCATTACATTTAAATATTAAGCAATCTTTGAAGAGAAAAC
EV548798       <-- CATAATCTGGTCATTAAATTTAAGTATTAAGCAATCTTTGAAGGGAAAAC
FD937642       <-- CATAATCTGGTCATTACATTTAAATATTAAGCAATCTTTGAAGAGAAAAC
EY941002       <-- CATAATCTGGTCATTACATTTAAATATTAAGCAATCTTTGAAGAGAAAAC
EX765496       <-- CATAATCTGGTCATTACATTTAAGTATTAAGCAATCTCTGAAGGGAAAAC
FD945977       <-- CACAATCTGGTCATTACATTTAAATATTAAGCAATCTTTGAAGAGAAAAC
FD555363       --> CATAATCTGGTCATTACATTTAAATATTAAGCAATCTTTGAAGAGAAAAC
FD944374       --> CATAATCTGGTCATTACATTTAAATATTAAGCAATCTTTGAAGAGAAAAC
EY934760       --> CATAATCTGGTCATTACATTTAAATATTAAGCAATCTTTGAAGAGAAAAC
EV545743       --> CATAATCTGGTCATTACATTTAAGTATTAAGCAATCTTTGAAGGGAAAAC
EW720276       --> CATAATCTGGTCATTACATTTAAATATTAAGCAATCTTTGAAGAGAAAAC
FD934217       --> CATAATCTGGTCATTACATTTAAATATTAAGCAATCTTTGAAGAGAAAAC
EY936664       --> CATAATCTGGTCATTACATTTAAATATTAAGCAATCTTTGAAGAGAAAAC
FD942183       --> CACAATCTGGTCATTACATTTAAATATTAAGCAATCTTTGAAGAGAAAAC
EW727816       --> ..................................................

               151    -    201
UN09376        --> ATTGAGTTCATAGGTAGGATAAG-CAGAAGAATGACCACAAATTGACAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD559702       <-- ATTGAGTTCATAGGTAGGATAAGGCAGAAGAATGACCACAAATTGACAGT  Raphanus raphanistrum subsp. landra
EV547945       <-- ATTGAGTTCATAGGTAGGATAAGGCAGAAGAATGA----CCATTGACAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD948617       <-- ATTGAGTTCATAGGTAGGATAAG-CAGAAGAATGACCACAAATTGACAGT  Raphanus sativus cv Early Scarlet Globe
EY938689       <-- ACTGAGTTCATAGGTAGGATAAG-CAGAAGAATGACCACAAATTGACAGT  Raphanus sativus cv Early Scarlet Globe
EV550446       <-- ATTGAGTTCATAGGTAGGATAAGGCTGAAGAATGACCACAAATTGACAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW713561       <-- ATTGAGTTCATAGGTAGGATAAGGCAGAAGAATGA----CCATTGACAGT  Raphanus sativus var. oleiformis
EW713562       <-- ATTGAGTTCATAGGTAGGATAAGGCAGAAGAATGA----CCATTGACAGT  Raphanus sativus var. oleiformis
EW715598       <-- ATTGAGTTCATAGGTAGGATAAG-CAGAAGAATGACCACAAATTGACAGT  Raphanus sativus var. oleiformis
EV548798       <-- ATTGAGTTCATAGGTAGGATAAGGCTGAAGAATGACCACAAATTGACAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD937642       <-- ATTGAGTTCATAGGTAGGATAAG-CAGAAGAATGACCACAAATTGACAGT  Raphanus sativus var. oleiformis
EY941002       <-- ATTGAGTTCATAGGTAGGATAAG-CAGAAGAATGACCACAAATTGACAGT  Raphanus sativus cv Early Scarlet Globe
EX765496       <-- ATTGAGTTCATAGGTAGGATAAGGCTGAAGAATGACCACAAATTGACAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD945977       <-- ATTGAGTTCATAGGTAGGATAAG-CAGAAGAATGACCACAAATTGACAGT  Raphanus sativus cv Early Scarlet Globe
FD555363       --> ATTGAGTTCATAGGTAGGATAAGGCAGAAGAATGACCACAAATTGACAGT  Raphanus raphanistrum subsp. landra
FD944374       --> ATTGAGTTCATAGGTAGGATAAG-CAGAAGAATGACCACAAATTGACAGT  Raphanus sativus cv Early Scarlet Globe
EY934760       --> ACTGAGTTCATAGGTAGGATAAG-CAGAAGAATGACCACAAATTGACAGT  Raphanus sativus cv Early Scarlet Globe
EV545743       --> ATTGAGTTCATAGGTAGGATAAGGCTGAAGAATGACCACAAATTGACAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720276       --> ATTGAGTTCATAGGTAGGATAAG-CAGAAGAATGACCACAAATTGACAGT  Raphanus sativus var. oleiformis
FD934217       --> ATTGAGTTCATAGGTAGGATAAG-CAGAAGAATGACCACAAATTGACAGT  Raphanus sativus var. oleiformis
EY936664       --> ATTGAGTTCATAGGTAGGATAAG-CAGAAGAATGACCACAAATTGACAGT  Raphanus sativus cv Early Scarlet Globe
FD942183       --> ATTGAGTTCATAGGTAGGATAAG-CAGAAGAATGACCACAAATTGACAGT  Raphanus sativus cv Early Scarlet Globe
EW727816       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               201    -    251
UN09376        --> AAAAATGATTTGAAATTCTTTAAAAAAGTAGAGTTGCCCATGCAGCAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD559702       <-- AAAAATGATTTGAAATTCTTTAAAAAAGTAGGGTTGCCCATGCAGCAATA  Raphanus raphanistrum subsp. landra
EV547945       <-- AAAAATGATCTGAA-TTCTTTAAAAAAGTAGAGTTGCCCATGCAGCAATG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD948617       <-- AAAAATGATTTGAAATTCTTTAAAAAAGTAGAGTTGCCCATGCAGCAATA  Raphanus sativus cv Early Scarlet Globe
EY938689       <-- AAAAATGATTTGAAATTCTTTAAAAAAGTAGAGTTGCCCATGCAGCAATA  Raphanus sativus cv Early Scarlet Globe
EV550446       <-- AAAAATGATTTGAAATTCTTTAAAAAAGTAGAGTTGCCCATGCAGCAATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW713561       <-- AAAAATGATTTGAAATTCTTTAAAAAAGTAGAGTTGCCCATGCAGCAATG  Raphanus sativus var. oleiformis
EW713562       <-- AAAAATGATTTGAAATTCTTTAAAAAAGTAGAGTTGCCCATGCAGCAATG  Raphanus sativus var. oleiformis
EW715598       <-- AAAAATGATTTGAAATTCTTTAAAAAAGTAGAGTTGCCCATGCAGCAATA  Raphanus sativus var. oleiformis
EV548798       <-- AAAAATGATTTGAAATTCTTTAAAAAAGTAGAGTTGCCCATGCAGCAATG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD937642       <-- AAAAATGATTTGAAATTCTTTAAAAAAGTAGAGTTGCCCATGCAGCAATA  Raphanus sativus var. oleiformis
EY941002       <-- AAAAATGATTTGAAATTCTTTAAAAAAGTAGAGTTGCCCATGCAGCAATA  Raphanus sativus cv Early Scarlet Globe
EX765496       <-- AAAAATGATTTGAAATTCTTTAAAAAAGTAGAGTTGCCCATGCAGCAATG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD945977       <-- AAAAATGATTTGAAATTCTTTAAAAAAGTAGAGTTGCCCATGCAGCAATA  Raphanus sativus cv Early Scarlet Globe
FD555363       --> AAAAATGATTTGAAATTCTTTAAAAAAGTAGGGTTGCCCATGCAGCAATA  Raphanus raphanistrum subsp. landra
FD944374       --> AAAAATGATTTGAAATTCTTTAAAAAAGTAGAGTTGCCCATGCAGCAATA  Raphanus sativus cv Early Scarlet Globe
EY934760       --> AAAAATGATTTGAAATTCTTTAAAAAAGTAGAGTTGCCCATGCAGCAATA  Raphanus sativus cv Early Scarlet Globe
EV545743       --> AAAAATGATTTGAAATTCTTTAAAAAAGTAGAGTTGCCCATGCAGCAATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720276       --> AAAAATGATTTGAAATTCTTTAAAAAAGTAGAGTTGCCCATGCAGCAATA  Raphanus sativus var. oleiformis
FD934217       --> AAAAATGATTTGAAATTCTTTAAAAAAGTAGAGTTGCCCATGCAGCAATA  Raphanus sativus var. oleiformis
EY936664       --> AAAAATGATTTGAAATTCTTTAAAAAAGTAGAGTTGCCCATGCAGCAATA  Raphanus sativus cv Early Scarlet Globe
FD942183       --> AAAAATGATTTGAAATTCTTTAAAAAAGTAAAGTTGCCCATGCAGCAATA  Raphanus sativus cv Early Scarlet Globe
EW727816       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               251    -    301
UN09376        --> AACGCAAAGCCTCCGAATGGTGCCAGGGTAGAAAACTTCCTGTCCTCGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD559702       <-- AACGCAAAGCCTCCGAATGGTGCCAGGGTAGAAAACTTCCTGTCCTCGCG
EV547945       <-- AACGCAAAGCCTCCGAATGGTGCCAGGGTAGAAAACTTCCTGTCCTCGCG
FD948617       <-- AACGCAAAGCCTCCGAATGGTGCCAGGGTAGAAAACTTCCTGTCCTCGCG
EY938689       <-- AACGCAAAGCCTCCGAATGGTGCCAGGGTAGAAAACTTCCTGTCCTCGCG
EV550446       <-- AACGCAAAGCCTCCGAATGATGCCAGGGTAGAAAACTTCCTGTCCTCGCG
EW713561       <-- AACGCAAAGCCTCCGAATGGTGCCAGGGTAGAAAACTTCCTGTCCTCGCG
EW713562       <-- AACGCAAAGCCTCCGAATGGTGCCAGGGTAGAAAACTTCCTGTCCTCGCG
EW715598       <-- AACGCAAAGCCTCCGAATGGTGCCAGGGTAGAAAACTTCCTGTCCTCGCG
EV548798       <-- AACGCAAAGCCTCCGAATGGTGCCAGGGTAGAAAACTTCCTGTCCTCGCG
FD937642       <-- AACGCAAAGCCTCCGAATGGTGCCAGGGTAGAAAACTTCCTGTCCTCGCG
EY941002       <-- AACGCAAAGCCTCCGAATGGTGCCAGGGTAGAAAACCTCCTGTCCTCGCG
EX765496       <-- AACGCAAAGCCTCCGAATGGTGCCAGGGTAGAAAACTTCCTGTCCTCGCG
FD945977       <-- AACGCAAAGCCTCCGAATAGTGCCAGGGTAGAAAACTTCCTGTCCTCGCG
FD555363       --> AACGCAAAGCCTCCGAATGGTGCCAGGGTAGAAAACTTCCTGTCCTCGCG
FD944374       --> AACGCAAAGCCTCCGAATGGTGCCAGGGTAGAAAACTTCCTGTCCTCGCG
EY934760       --> AACGCAAAGCCTCCGAATGGTGCCAGGGTAGAAAACTTCCTGTCCTCGCG
EV545743       --> AACGCAAAGCCTCCGAATGATGCCAGGGTAGAAAACTTCCTGTCCTCGCG
EW720276       --> AACGCAAAGCCTCCGAATGGTGCCAGGGTAGAAAACTTCCTGTCCTCGCG
FD934217       --> AACGCAAAGCCTCCGAATGGTGCCAGGGTAGAAAACTTCCTGTCCTCGCG
EY936664       --> AACGCAAAGCCTCCGAATGGTGCCAGGGTAGAAAACCTCCTGTCCTCGCG
FD942183       --> AACGCAAAGCCTCCGAATAGTGCCAGGGTAGAAAACTTCCTGTCCTCGCG
EW727816       --> ......................CCAGGGTAGAAAACTTCCTGTCCTCGCG

               301    -    351
UN09376        --> CAATGCTACCATGTAACACGTGCCGGAAAAGGCCACAATCCCAGTAGTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD559702       <-- CAATGCTACCATGTAACACGTGCCGGAAAAGGCAACAATCCCAGTAGTCA
EV547945       <-- CAATGCTACCATGTAACACGTGACGGAAAAGGCCACAATCCCAGTAGTCA
FD948617       <-- CAATGCTACCATGTAACACGTGCCGGAAAAGGCCACAATCCCAGTAGTCA
EY938689       <-- CAATGCTACCATGTAACACGTGCCGGAAAAGGCCACAATCCCAGTAGTCA
EV550446       <-- CAATGCTACCATGTAACACGTGCCGGAAAAGGCCACAATCCCAGTAGTCA
EW713561       <-- CAATGCTACCATGTAACACGTGCCGGAAAAGGCCACAATCCCAGTAGTCA
EW713562       <-- CAATGCTACCATGTAACACGTGCCGGAAAAGGCCACAATCCCAGTAGTCA
EW715598       <-- CAATGCTACCATGTAACACGTGCCGGAAAAGGCCACAATCCCAGTAGTCA
EV548798       <-- CAATGCTACCATGTAACACGTGCCGGAAAAGGCCACAATCCCAGTAGTCA
FD937642       <-- CAATGCTACCATGTAACACGTGCCGGAAAAGGCCACAATCCCAGTAGTCA
EY941002       <-- CAATGCTACCATGTAACACGTGCCGGAAAAGGCCACAATCCCAGTAGTCA
EX765496       <-- CAATGCTACCATGTAACACGTGCCGGAAAAGGCCACAATCCCAGTAGTCA
FD945977       <-- CAATGCTACCATGTAACACGTGCCGGAAAAGACCACAATCCCAGTAGTCA
FD555363       --> CAATGCTACCATGTAACACGTGCCGGAAAAGGCAACAATCCCAGTAGTCA
FD944374       --> CAATGCTACCATGTAACACGTGCCGGAAAAGGCCACAATCCCAGTAGTCA
EY934760       --> CAATGCTACCATGTAACACGTGCCGGAAAAGGCCACAATCCCAGTAGTCA
EV545743       --> CAATGCTACCATGTAACACGTGCCGGAAAAGGCCACAATCCCAGTAGTCA
EW720276       --> CAATGCTACCATGTAACACGTGCCGGAAAAGGCCACAATCCCAGTAGTCA
FD934217       --> CAATGCTACCATGTAACACGTGCCGGAAAAGGCCACAATCCCAGTAGTCA
EY936664       --> CAATGCTACCATGTAACACGTGCCGGAAAAGGCCACAATCCCAGTAGTCA
FD942183       --> CAATGCTACCATGTAACACGTGCCGGAAAAGACCACAATCCCAGTAGTCA
EW727816       --> CAATGCTACCATGTAACACGTGCCGGAAAAGGCCACAATCCCAGTAGTCA

               351    -    401
UN09376        --> ACAAGCCACCAAAAATGTTGGGATATTTAGTGCTAGGAGCAGAAACAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD559702       <-- ACAAGCCACCAAAAATGTTGGGATATTTAGTGCTAGGAGCAGAAACAAGA
EV547945       <-- ACAAGCCACCAAAAATGTTGGGATATTTAGTGATAGGAGCAGAAACAAGA
FD948617       <-- ACAAGCCACCAAAAATGTTGGGATATTTAGTGCTAGGAGCAGAAACAAGA
EY938689       <-- ACAAGCCACCAAAAATGTTGGGATATTTAGTGCTAGGAGCAGAAACAAGA
EV550446       <-- ACAAGCCACCAAAAATGTTGGGATATTTAGTGCTAGGAGCAGAAACAAGA
EW713561       <-- ACAAGCCACCAAAAATGTTGGGATATTTAGTGCTAGGAGCAGAAACAAGA
EW713562       <-- ACAAGCCACCAAAAATGTTGGGATATTTAGTGCTAGGAGCAGAAACAAGA
EW715598       <-- ACAAGCCACCAAAAATGTTGGGATATTTAGTGCTAGGAGCAGAAACAAGA
EV548798       <-- ACAAGCCACCAAAAATGTTGGGATATTTAGTGCTAGGAGCAGAAACAAGA
FD937642       <-- ACAAGCCACCAAAAATGTTGGGATATTTAGTGCTAGGAGCAGAAACAAGA
EY941002       <-- ACAAGCCACCAAGAATGTTGGGATATTTAGTGCTAGGAGCAGAAACAAGA
EX765496       <-- ACAAGCCACCAAAAATGTTGGGATATTTAGTGCTAGGAGCAGAAACAAGA
FD945977       <-- ACAAGCCACCAAAAATGTTGGGATATTTAGTGCTAGGAGCAGAAACAAGA
FD555363       --> ACAAGCCACCAAAAATGTTGGGATATTTAGTGCTAGGAGCAGAAACAAGA
FD944374       --> ACAAGCCACCAAAAATGTTGGGATATTTAGTGCTAGGAGCAGAAACAAGA
EY934760       --> ACAAGCCACCAAAAATGTTGGGATATTTAGTGCTAGGAGCAGAAACAAGA
EV545743       --> ACAAGCCACCAAAAATGTTGGGATATTTAGTGCTAGGAGCAGAAACAAGA
EW720276       --> ACAAGCCACCAAAAATGTTGGGATATTTAGTGCTAGGAGCAGAAACAAGA
FD934217       --> ACAAGCCACCAAAAATGTTGGGATATTTAGTGCTAGGAGCAGAAACAAGA
EY936664       --> ACAAGCCACCAAGAATGTTGGGATATTTAGTGCTAGGAGCAGAAACAAGA
FD942183       --> ACAAGCCACCAAAAATGTTGGGATATTTAGTGCTAGGAGCAGAAACAAGA
EW727816       --> ACAAGCCACCAAAAATGTTGGGATATTTAGTGCTAGGAGCAGAAACAAGA

               401    -    451
UN09376        --> GCTGCAGTGTGAACCAAATGGTAAAGAGAAGCCGTCTGCCACACCTGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD559702       <-- GCTGCAGTGTGAACCAAATGGTAAAGAGAAGCCGTTTGCCACACCTGTTT  Raphanus raphanistrum subsp. landra
EV547945       <-- GCTGCAGTGTGAACCAAATGGTAAAGAGAAGCCGTTTGCCACACCTGTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD948617       <-- GCTGCAGTGTGAACCAAATGGTAAAGAGAAGCCGTCTGCCACACCTGTTT  Raphanus sativus cv Early Scarlet Globe
EY938689       <-- GCTGCAGTGTGAACCAAATGGTAAAGAGAAGCCGTCTGCCACACCTGTTT  Raphanus sativus cv Early Scarlet Globe
EV550446       <-- GCTGCAGTGTGAACCAAATGGTAAAGAGAAGCCGTTTGCCACACCTGTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW713561       <-- GCTGCAGTGTGAACCAAATGGTAAAGAGAAGCCGTTTGCCACACCTGTTT  Raphanus sativus var. oleiformis
EW713562       <-- GCTGCAGTGTGAACCAAATGGTAAAGAGAAGCCGTTTGCCACACCTGTTT  Raphanus sativus var. oleiformis
EW715598       <-- GCTGCAGTGTGAACCAAATGGTAAAGAGAAGCCGTCTGCCACACCTGTTT  Raphanus sativus var. oleiformis
EV548798       <-- GATGCAGTGTGAACCAAATGGTAAAGAGAAGCCGTTTGCCACACC.....  Raphanus raphanistrum subsp. raphanistrum (NY)
FD937642       <-- GCTGCAGTGTGAACCAAATGGTAAAGAGAAGCCGTCTGCCACACCTGTTT  Raphanus sativus var. oleiformis
EY941002       <-- GCTGCAGTGTGAACCAAATGGTAAAGAGAAGCCGTCTGCCACACCTGTTT  Raphanus sativus cv Early Scarlet Globe
EX765496       <-- GCTGCAGTGTGAACCAAATGGTAAAGAGAAGCCGTTTGCCACACCTGTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD945977       <-- GCTGCAGTGTGAACCAAATGGTAAGGAGAAGCCGTCTGCCACACCc....  Raphanus sativus cv Early Scarlet Globe
FD555363       --> GCTGCAGTGTGAACCAAATGGTAAAGAGAAGCCGTTTGCCACACCTGTTT  Raphanus raphanistrum subsp. landra
FD944374       --> GCTGCAGTGTGAACCAAATGGTAAAGAGAAGCCGTCTGCCACACCTGTTT  Raphanus sativus cv Early Scarlet Globe
EY934760       --> GCTGCAGTGTGAACCAAATGGTAAAGAGAAGCCGTCTGCCACACCTGTTT  Raphanus sativus cv Early Scarlet Globe
EV545743       --> GCTGCAGTGTGAACCAAATGGTAAAGAGAAGCCGTTTGCCACACCTGTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720276       --> GCTGCAGTGTGAACCAAATGGTAAAGAGAAGCCGTCTGCCACACCTGTTT  Raphanus sativus var. oleiformis
FD934217       --> GCTGCAGTGTGAACCAAATGGTAAAGAGAAGCCGTCTGCCACACCTGTTT  Raphanus sativus var. oleiformis
EY936664       --> GCTGCAGTGTGAACCAAATGGTAAAGAGAAGCCGTCTGCCACACCTGTTT  Raphanus sativus cv Early Scarlet Globe
FD942183       --> GCTGCAGTGTGAACCAAATGGTAAGGAGAAGCCGTCTGCCACACCc....  Raphanus sativus cv Early Scarlet Globe
EW727816       --> GCTGCAGTGTGAACCAAATGGTAAAGAGAAGCCGTCTGCCACACC.....  Raphanus sativus cv Early Scarlet Globe

               451    -    501
UN09376        --> GTAAGAAGGGTTTTCTGGCTTAAAGACATGAGCACCATAAGTTCCTAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD559702       <-- GTAAGAAGGGTTTTCTGGCTTAAAGACATGAGCACCGTAAGTTCCTAAAC  Raphanus raphanistrum subsp. landra
EV547945       <-- GTAAGAAGGGTTTTCTGGCTTAAAGACATGAGCACCGTAAGTTCCTAAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD948617       <-- GTAAGAAGGGTTTTCTGGCTTAAAGACATGAGCACCATAAGTTCCTAAAC  Raphanus sativus cv Early Scarlet Globe
EY938689       <-- GTAAGAAGGGTTTTCTGGCTTAAAGACATGAGCACCATAAGTTCCTAAAC  Raphanus sativus cv Early Scarlet Globe
EV550446       <-- GTAAGAAGGGTTTTCTGGCTTAAAGAAATGAGCACCGTAAGTTCCTAAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW713561       <-- GTAAGAAGGGTTTTCTGGCTTAAAGACATGAGCACCGTAAGTTCCTAAAC  Raphanus sativus var. oleiformis
EW713562       <-- GTAAGAAGGGTTTTCTGGCTTAAAGACATGAGCACCGTAAGTTCCTAAAC  Raphanus sativus var. oleiformis
EW715598       <-- GTAAGAAGGGTTTTCTGGCTTAAAGACATGAGCACCATAAGTTCCTAAAC  Raphanus sativus var. oleiformis
EV548798       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD937642       <-- GTAAGAAGGGTTTTCTGGCTTAAAGACATGAGCACCATAAGTTCCTAAAC  Raphanus sativus var. oleiformis
EY941002       <-- GTAAGAAGGGTTTTCTGGCTTAAAGACATGAGCACCATAAGTTCCTAAAC  Raphanus sativus cv Early Scarlet Globe
EX765496       <-- GTAAGAAGGGTTTTCTGGCTTAAAGAAATGAGCACCGTAAGTTCCTAAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD945977       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD555363       --> GTAAGAAGGGTTTTCTGGCTTAAAGACATGAGCACCGTAAGTTCCTAAAC  Raphanus raphanistrum subsp. landra
FD944374       --> GTAAGAAGGGTTTTCTGGCTTAAAGACATGAGCACCATAAGTTCCTAAAC  Raphanus sativus cv Early Scarlet Globe
EY934760       --> GTAAGAAGGGTTTTCTGGCTTAA...........................  Raphanus sativus cv Early Scarlet Globe
EV545743       --> GTAAGAAGGGTTTTCTGGCTTAAAGAAATGAGCACCGTAAGTTCCTAAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720276       --> GTAAGAAGGGTTTTCTGGCTTAAAGACATGAGCACCATAAGTTCCTAAAC  Raphanus sativus var. oleiformis
FD934217       --> GTAAGAAGGGTTTTCTGGCTTAAAGACATGAGCACCATAAGTTCCTAAAC  Raphanus sativus var. oleiformis
EY936664       --> GTAAGAAGGGTTTTCTGGCTTAAAGACATGAGCACCATAAGTTCCTAAAC  Raphanus sativus cv Early Scarlet Globe
FD942183       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW727816       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               501    -    551
UN09376        --> CAAGAGCAGCCATGCCAGAAACGGCGGCGACTTTGTGCCATATCCGAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD559702       <-- CAAGAGCAGCCATGCCAGAAACGGCGGCGACTTTGTGCCATATCCGAGGA
EV547945       <-- CAAGAGCAGCCATG....................................
FD948617       <-- CACGAGCAGCCATGCCATAAACGGCGGCGACTTTGTGCCATATCCGAGGA
EY938689       <-- CAAGAGCAGCCATGCCAGAAACGGCGGCGACTTTGTGCCATATCCGAGGA
EV550446       <-- CAAGAGCAGCCATGCCAGAAACGGCGGCGACTTTGTGCCATATCCGAGGA
EW713561       <-- CAAGAGCAGCCATG....................................
EW713562       <-- CAAGAGCAGCCATGCCAGAAACGGCGGCGACTTTGTGCCATATCCGAGGA
EW715598       <-- CAAGAGCAGCCATGCCAGAAACGGCGGCGACTTTGTGCCATATCCGAGGA
EV548798       <-- ..................................................
FD937642       <-- CAAGAGCAGCCATGCCAGAAACGGCGGCGACTTTGTGCCATATCCGAGGA
EY941002       <-- CAAGAGCAGCCATGCCAGAAACGGCGGCGACTTTGTGCCATATCCGAGGA
EX765496       <-- CAAGAGCAGCCATGCCAGAAACGGCGGCGACTTTGTACCATATCCGAGGA
FD945977       <-- ..................................................
FD555363       --> CAAGAGCAGCCATGCCAGAAACGGCGGCGACTTTGTGCCATATCCGAGGA
FD944374       --> CACGAGCAGCCATGCCATAAACGGCGGCGACTTTGTGCCATATCCGAGGA
EY934760       --> ..................................................
EV545743       --> CAAGAGCAGCCATGCCAGAAACGGCGGCGACTTTGTGCCATATCCGAGGA
EW720276       --> CAAGAGCAGCCATGCCAGAAACGGCGGCGACTTTGTGCCATATCCGA...
FD934217       --> CAAGAGCAGCCATGCCAGAAACGGCGGCGACTTTGTGCCATATCCGAGGA
EY936664       --> CAAGAGCAGCCATGCCAGAAACGGCGGCGACTTTGTGCCATATCCGAGGA
FD942183       --> ..................................................
EW727816       --> ..................................................

               551    -    601
UN09376        --> TCCATCGATTGTCTTCCTCTGAAATCTCTTAGGTTGCTTCTGACGCAATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD559702       <-- TCCATCGATTGTCTTCCTCTGAAATCTCTTAGGTTGCTTCTTACGCAATT  Raphanus raphanistrum subsp. landra
EV547945       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD948617       <-- TCCATCGATTGTCTTCCTCTGAAATCTCTTAGGTTGCTTCTGACGCAATT  Raphanus sativus cv Early Scarlet Globe
EY938689       <-- TCCATCGATTGTCTTCCTCTGAAATCTCTTAGGTTGCTTCTGACGCAATc  Raphanus sativus cv Early Scarlet Globe
EV550446       <-- TCCATCGATCGTCTTCCTCTGAAATCTCTTAGGTTGCTTCTTACGCAATT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW713561       <-- ..................................................  Raphanus sativus var. oleiformis
EW713562       <-- TCCATCGATCGTCTTCCTCTGAAATCTCTTAGGTTGCTTCTTACGCAATT  Raphanus sativus var. oleiformis
EW715598       <-- TCCATCGGTTGTCTTCCTCTGAAATCTCTTAGGTTGCTTCTGACGCAATT  Raphanus sativus var. oleiformis
EV548798       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD937642       <-- TCCATCGATTGTCTTCCTCTGAAATCTCTTAGGTTGCTTCTGACGCAATT  Raphanus sativus var. oleiformis
EY941002       <-- TCCATCGATTGTCTTCCTCTGAAATCTCTTAGGTTGCTTCTGACGCcct.  Raphanus sativus cv Early Scarlet Globe
EX765496       <-- TCCATCGATCGTCTTCCGCTGAAATCTCTTAGGTTGC.............  Raphanus raphanistrum subsp. raphanistrum (NY)
FD945977       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD555363       --> TCCATCGATTGTCTTCCTCTGAAATCTC......................  Raphanus raphanistrum subsp. landra
FD944374       --> TCCATCGATTGTCTTCCTCTGAAATCTCTTAGGTTGCTTCTGACGCAATT  Raphanus sativus cv Early Scarlet Globe
EY934760       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV545743       --> TCCATCGATCGTCTTCCTCTGAAATCTCTTAGGTTGCTTCTTACGCAATT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW720276       --> ..................................................  Raphanus sativus var. oleiformis
FD934217       --> TCCATCGATTGTCTTCCTCTGAAATCTCTTAGGTTGCTTCTGACGCAATT  Raphanus sativus var. oleiformis
EY936664       --> TCCATCGATTGTCTTCCTCTGAAATCTCTTAGGTTGCTTCTGACGCcct.  Raphanus sativus cv Early Scarlet Globe
FD942183       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW727816       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               601    -    651
UN09376        --> TCCCCCCCC
                   ~~~~~~~~~
FD559702       <-- TCCCCC...
EV547945       <-- .........
FD948617       <-- TCCCCC...
EY938689       <-- cccc.....
EV550446       <-- TCCCCC...
EW713561       <-- .........
EW713562       <-- TCCCCCCCC
EW715598       <-- TCCCCC...
EV548798       <-- .........
FD937642       <-- TCCCCCC..
EY941002       <-- .........
EX765496       <-- .........
FD945977       <-- .........
FD555363       --> .........
FD944374       --> TCCCCC...
EY934760       --> .........
EV545743       --> TCCCCC...
EW720276       --> .........
FD934217       --> TCCCCCC..
EY936664       --> .........
FD942183       --> .........
EW727816       --> .........