1      -     51
UN09389        --> AATGAAAAGAGAATGTTGATAAACAAAAAACTGTTTGACACAATAGCACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570153       <-- AATGAAAAGAGAATGTTGATAAACAAAAAACTGTTTGACACAATAGCACA
FD578875       <-- ...GAAAAGAGAATGTTGATAAACAAAAAACTGTTTGACACAATAGCACA
FD564286       <-- ....AAAAGAGAATGTTGATAAACAAAAAACTGTTTGACACAATAGCACA
EX757773       <-- ..................................................
FD973431       <-- ..................................................
FD574217       --> AATGAAAAGAGAATGTTGATAAACAAAAAACTGTTTGACACAATAGCACA
EX761275       --> ..................................................

               51     -    101
UN09389        --> AGAAAAGAACAAGAACAAGTCCATAAAAAACAAATCTGAAAGAGAGTATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570153       <-- AGAAAAGAACAAGAACAAGCCCATAAAAAACAAATCTGAAAGAGAGTATC  Raphanus sativus cv Early Scarlet Globe
FD578875       <-- AGAAAAGA------ACAAGTCCATAAAAAACAAATCTGAAAGAGAGTATC  Raphanus sativus cv Rat-Tail Radish #3870
FD564286       <-- AGAAAAGAACAAGAA-AAGTCCATAAAAAACAAATCTGAAAGAGAGTATC  Raphanus sativus var. oleiformis
EX757773       <-- .............................ggtcaaCTGAAACAGAGTATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973431       <-- .............................ggtcaaCTGAAACAGAGTATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD574217       --> AGAAAAGAACAAGAACAAGCCCATAAAAAACAAATCTGAAAGAGAGTATC  Raphanus sativus cv Early Scarlet Globe
EX761275       --> .............................ggtcaaCTGAAACAGAGTATC  Raphanus raphanistrum subsp. raphanistrum (MS)

               101    -    151
UN09389        --> TAGTAAGCTAGAATTAAACTTTGATAGCGTACTTCCTGATTGGGAAATAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570153       <-- TAGTAAGCTAGAATTAAACTTTGATAGCGTACTTCCTGATTGGGAAATAC
FD578875       <-- TAGTAAGCTAGAATTAAACTTTGATAGCGTACTTCCTGATTGGGAAATAC
FD564286       <-- TAGTAAGCTAGAATTAAACTTTGATAGCGTACTTCCTGATTGGGAAATAC
EX757773       <-- TAGTAAGCTAGAATTAAACTTTGATAGCGTACTTCCTGATTGGGAAATAC
FD973431       <-- TAGTAAGCTAGAATTAAACTTTGATAGCGTACTTCCTGATTGGGAAATAC
FD574217       --> TAGTAAGCTAGAATTAAACTTTGATAGCGTACTTCCTGATTGGGAAATAC
EX761275       --> TAGTAAGCTAGAATTAAACTTTGATAGCGTACTTCCTGATTGGGAAATAC

               151    -    201
UN09389        --> ATTTCCTTCTTCTTCTCACGCTCTGTCTTCAACGAGAGCTGATGTTTGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570153       <-- ATT-CCTTCTTCTTCTCACGCTCTGTCTTCAACGAGAGCTGATGTTTGGT  Raphanus sativus cv Early Scarlet Globe
FD578875       <-- ATTTCCTTCTTCTTCTCACGCTCTGTCTTCAACGAGAGCTGATGTTTGGT  Raphanus sativus cv Rat-Tail Radish #3870
FD564286       <-- ATTTCCTTCTTCTTCTCACGCTCTGTCTTCAACGAGAGCTGATGTTTGGT  Raphanus sativus var. oleiformis
EX757773       <-- ATTTCCTTCTTCTTCTCACGCTCTGTCTTCAACGACAGCTGATGTTTGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973431       <-- ATTTCCTTCTTCTTCTCACGCTCTGTCTTCAACGACAGCTGATGTTTGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD574217       --> ATT-CCTTCTTCTTCTCACGCTCTGTCTTCAACGAGAGCTGATGTTTGGT  Raphanus sativus cv Early Scarlet Globe
EX761275       --> ATTTCCTTCTTCTTCTCACGCTCTGTCTTCAACGACAGCTGATGTTTGGT  Raphanus raphanistrum subsp. raphanistrum (MS)

               201    -    251
UN09389        --> GAGGCGCCTGCGGATAGCACGTGTTTTCTTGGGGCGGAGATCGAGAGGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570153       <-- GAGGCGCCTGCGGATAGCACGTGTTTTCTTGGGGCGGAGATCGAGAGGGA  Raphanus sativus cv Early Scarlet Globe
FD578875       <-- GAGGCGCCTGCGGATAGCACGTGTTTTCTTGGGGCGGAGATCGAGAGGGA  Raphanus sativus cv Rat-Tail Radish #3870
FD564286       <-- GAGGCGCCTGCGGATAGCACGTGTTTTCTTGGGGCGGAGATCGAGAGGGA  Raphanus sativus var. oleiformis
EX757773       <-- AAGGCGCCTGCGGATAGCACGTGTTTTCTTGGGGCGTAGATCAAGAGGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973431       <-- AAGGCGCCTGCGGATAGCACGTGTTTTCTTGGGGCGTAGATCAAGAGGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD574217       --> GAGGCGCCTGCGGATAGCACGTGTTTTCTTGGGGCGGAGATCGAGAGGGA  Raphanus sativus cv Early Scarlet Globe
EX761275       --> AAGGCGCCTGCGGATAGCACGTGTTTTCTTGGGGCGTAGATCAAGAGGGA  Raphanus raphanistrum subsp. raphanistrum (MS)

               251    -    301
UN09389        --> TGAACTTCTTGTTCTTGTACGCTTCTCTGAGAGCAGACTTCTGCTTCTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570153       <-- TGAACTTCTTGTTCTTGTACGCTTCTCTGAGAGCAGACTTCTGCTTCTGA
FD578875       <-- TGAACTTCTTGTTCTTGTACGCTTCTCTGAGAGCAGACTTCTGCTTCTGA
FD564286       <-- TGAACTTCTTGTTCTTGTACGCTTCTCTGAGAGCAGACTTCTGCTTCTGA
EX757773       <-- TGAACTCCTTGTTCTTGTACGCTTCTCTGAGAGCAGACTTCTGCTTCTGA
FD973431       <-- TGAACTTCTTGTTCTTGTACGCTTCTCTGAGAGCAGACTTCTGCTTCTGA
FD574217       --> TGAACTTCTTGTTCTTGTACGCTTCTCTGAGAGCAGACTTCTGCTTCTGA
EX761275       --> TGAACTCCTTGTTCTTGTACGCTTCTCTGAGAGCAGACTTCTGCTTCTGA

               301    -    351
UN09389        --> GATGTCACGGTCAACACCTGAGCTATCGATTTTCGGACAACCTTGATTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570153       <-- GATGTCACGGTCAACACCTGAGCTATCGATTTTCGGACAACCTTGATTTT
FD578875       <-- GATGTCACGGTCAACACCTGAGCTATCGATTTTCGGACAACCTTGATTTT
FD564286       <-- GATGTCACGGTCAACACCTGAGCTATCGATTTTCGGACAACCTTGATTTT
EX757773       <-- GATGTCACGGTCAACACCTGAGCTATCGATTTTCGGACAACCTTGATTTT
FD973431       <-- GATGTCACGGTCAACACCTGAGCTATCGATTTTCGGACAACCTTGATTTT
FD574217       --> GATGTCACGGTCAACACCTGAGCTATCGATTTTCGGACAACCTTGATTTT
EX761275       --> GATGTCACGGTCAACACCTGAGCTATCGATTTTCGGACAACCTTGATTTT

               351    -    401
UN09389        --> GGAGAGCTTGTTGGGAGCACCTCCTGTGACTTTAGCGACACGGAGGAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570153       <-- GGAGAGCTTGTTGGGAGCACCTCCTGTGACTTTAGCGACACGGAGGAGAG  Raphanus sativus cv Early Scarlet Globe
FD578875       <-- GGAGAGCTTGTTGGGAGCACCTCCTGTGACTTTAGCGACACGGAGGAGAG  Raphanus sativus cv Rat-Tail Radish #3870
FD564286       <-- GGAGAGCTTGTTGGGAGCACCTCCTGTGACTTTAGCGACACGGAGGAGAG  Raphanus sativus var. oleiformis
EX757773       <-- GGAAAGCTTGTTGGGGGCACCTCCGGTGACTTTAGCGACACGGAGGAGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973431       <-- GGAAAGCTTGTTGGGGGCACCTCCGGTGACTTTAGCGACACGGAGGAGAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD574217       --> GGAGAGCTTGTTGGGAGCACCTCCTGTGACTTTAGCGACACGGAGGAGAG  Raphanus sativus cv Early Scarlet Globe
EX761275       --> GGAAAGCTTGTTGGGGGCACCTCCGGTGACTTTAGCGACACGGAGGAGAG  Raphanus raphanistrum subsp. raphanistrum (MS)

               401    -    451
UN09389        --> CGAGCTCGGCCTTGAGATCCTGAAGCTGGTTCTGAAGATCGCTCTTCGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570153       <-- CGAGCTCGGCCTTGAGATCCTGAAGCTGGTTCTGAAGATCGCTCTTCGAC
FD578875       <-- CGAGCTCGGCCTTGAGATCCTGAAGCTGGTTCTGAAGATCGCTCTTCGAC
FD564286       <-- CGAGCTCGGCCTTGAGATCCTGAAGCTGGTTCTGAAGATCGCTCTTCGAC
EX757773       <-- CGAGCTCGGCCTTGAGATCCTGAAGCTGGTTCTGAAGATCGCTCTTCGAC
FD973431       <-- CGAGCTCGGCCTTGAGATCCTGAAGCTGGTTCTGAAGATCGCTCTTCGAC
FD574217       --> CGAGCTCGGCCTTGAGATCCTGAAGCTGGTTCTGAAGATCGCTCTTCGAC
EX761275       --> CGAGCTCGGCCTTGAGATCCTGAAGCTGGTTCTGAAGATCGCTCTTCGAC

               451    -    501
UN09389        --> TTGTCTCTCAGCTCGTGAACCTTAATTCTTGCCATCGTGAGCTTGAATCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570153       <-- TTGTCTCTCAGCTCGTGAACCTTAATTCTTGCCATCGTGAGCTTGAATCG
FD578875       <-- TTGTCTCTCAGCTCGTGAACCTTAATTCTTGCCATCGTGAGCTTGAATCG
FD564286       <-- TTc...............................................
EX757773       <-- TTGTCTCTCAGCTCGTGAACCTTAATTCTTGCCATCGTGAGCTTGAATCG
FD973431       <-- TTGTCTCTCAGCTCGTGAACCTTAATTCTTGCCATCGTGAGCTTGAATCG
FD574217       --> TTGTCTCTCAGCTCGTGAACCTTAATTCTTGCCATCGTGAGCTTGAATCG
EX761275       --> TTGTCTCTCAGCTCGTGAACCTTAATTCTTGCCATCGTGAGCTTGAATCG

               501    -    551
UN09389        --> TGTTCAACTGATGCGCCGCTGCTACTTGTTGGTTCCCAGAATCAGACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570153       <-- TGTTCAACTGATGCGCCGCTGCTACTTGTTGGTTCCC...........
FD578875       <-- TGTTCAACTGATGCGCCGCTGCTACTTGTTGGTTCCC...........
FD564286       <-- ................................................
EX757773       <-- TGTTCAACTGATGCGCCGCTGCTACTTGTTGGTTCCC...........
FD973431       <-- TGTTCAACTGATGCGCCGCTGCTACTTGTTGGTTCAGAGAATCAGACC
FD574217       --> TGTTCAACTGATG...................................
EX761275       --> TGTTCAACTGATGCGCCGCTGCTACTTGTTGGTTCCC...........