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Alignment for radish unigene UN09404

               1      -     51
UN09404        --> CATACATAAACTCTGCCATTACCTATTCCACAAAACAACGGTTACAAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720356       <-- ...........gacctattcggCTATTCCACAAAACAACGGTTACAAAAT
FD546893       <-- .........................ggCCACAAAACAACGGTTACAACAT
EW721418       <-- .....................................ACGGTTACAAAAT
EX893652       <-- .....................................ACGGTTACAACAT
FD977136       <-- .....................................ACGGTTACAAAAT
FD982585       <-- ..................................................
FD550381       <-- ..................................................
FD546349       --> CATACATAAACTCTGCCATTACCTATTCCACAAAACAACGGTTACAAAAT
EW715860       --> ...........gacctattcggCTATTCCACAAAACAACGGTTACAAAAT
FD551015       --> .........................ggCCACAAAACAACGGTTACAACAT
FD534867       --> ............................ggaAAAACAACGGTTACAAAAT
EX762085       --> ..................................ggAACGGTTACAAAAT
EW717420       --> .....................................ACGGTTACAAAAT
EW731672       --> .....................................ACGGTTACAACAT
EX890061       --> .....................................ACGGTTACAACAT
EY901039       --> .....................................ACGGTTACAAAAT
EY948621       --> .....................................ACGGTTACAACAT
FD981359       --> .....................................ACGGTTACAAAAT
FD986310       --> .....................................ACGGTTACAAAAT
FY431817       --> ..................................................
FY431554       --> ..................................................
FY442291       --> ..................................................

               51     -    101
UN09404        --> ATACAAACAGCGAAAATGAATAACAAAGCGATATTCCTTCTCTTCCTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720356       <-- ATACAAACAGCGAAAATGAATAACAAAGCGATATTCCTTCTCTTCCTCTC
FD546893       <-- ATACAAACAGCGAAAATGAATAACAAAGCGATCTTCCTTCTCTTCCTCTC
EW721418       <-- ATACAAACAGCGAAAATGAATAACAAAGCGATATTCCTTCTCTTCCTCTC
EX893652       <-- ATACAAACAGCGAAAATGAATAACAAAGCGATCTTCCTTCTCTTCCTCTC
FD977136       <-- ATACAAACAGCGAAAATGAGTAACAAAGCGATATTCCTTCTCTTCCTCTC
FD982585       <-- ..................................................
FD550381       <-- ..................................................
FD546349       --> ATACAAACAGCGAAAATGAATAACAAAGCGATATTCCTTCTCTTCCTCTC
EW715860       --> ATACAAACAGCGAAAATGAATAACAAAGCGATATTCCTTCTCTTCCTCTC
FD551015       --> ATACAAACAGCGAAAATGAATAACAAAGCGATCTTCCTTCTCTTCCTCTC
FD534867       --> ATACAAACAGCGAAAATGAATAACAAAGCGATATTCCTTCTCTTCCTCTC
EX762085       --> ATACAAACAGCGAAAATGAATAACAAAGCGATATTCCTTCTCTTCCTCTC
EW717420       --> ATACAAACAGCGAAAATGAATAACAAAGCGATATTCCTTCTCTTCCTCTC
EW731672       --> ATACAAACAGCGAAAATGAATAACAAAGCGATCTTCCTTCTCTTCCTCTC
EX890061       --> ATACAAACAGCGAAAATGAATAACAAAGCGATCTTCCTTCTCTTCCTCTC
EY901039       --> ATACAAACAGCGAAAATGAATAACAAAGCGATATTCCTTCTCTTCCTCTC
EY948621       --> ATACAAACAGCGAAAATGAATAACAAAGCGATCTTCCTTCTCTTCCTCTC
FD981359       --> ATACAAACAGCGAAAATGAGTAACAAAGCGATATTCCTTCTCTTCCTCTC
FD986310       --> ATACAAACAGCGAAAATGAATAACAAAGCGATATTCCTTCTCTTCCTCTC
FY431817       --> ......ACAGCGAAA-TGAATAA-AAAGCGATATTCCTTCTCTTCCTCTC
FY431554       --> .................GAATAACAAAGCGATATTCCTTCTCTTCCTCTC
FY442291       --> ........................cAAGCGATATTCCTTCTCTTCCTCTC

               101    -    151
UN09404        --> TCTCGTTCTCCTTCCTCTCTACGCTTCTGCGTCGCCGTTTGTCGGTGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720356       <-- TCTCGTTCTCCTTCCTCTCTACGCTTCTGCGTCGCCGTTTTTCGGTGGAT
FD546893       <-- TCTCGTTCTCCTTCCTCTCTACGCTTCTGCGTCGCCGTTTGTCGGTGGAT
EW721418       <-- TCTCGTTCTCCTTCCTCTCTACGCTTCTGCGTCGCCGTTTGTCGGTGGAT
EX893652       <-- TCTCGTTCTCCTTCCTCTCTACGCTTTTGCGTCGCCGTTTGTCGGTGGAT
FD977136       <-- TCTCGTTCACCTTCCTCTCTACGCTTCTGCGTCGCCGTTTGTCGGTGGAT
FD982585       <-- ........................tttTGCGTCGCCGTTTGTCGGTGGAT
FD550381       <-- ..................................................
FD546349       --> TCTCGTTCTCCTTCCTCTCTACGCTTCTGCGTCGCCGTTTGTCGGTGGAT
EW715860       --> TCTCGTTCTCCTTCCTCTCTACGCTTCTGCGTCGCCGTTTTTCGGTGGAT
FD551015       --> TCTCGTTCTCCTTCCTCTCTACGCTTCTGCGTCGCCGTTTGTCGGTGGAT
FD534867       --> TCTCGTTCTCCTTCCTCTCTACGCTTCTGCGTCGCCGTTTGTCGGTGGAT
EX762085       --> TCTCGTTCTCCTTCCTCTCTACGCTTCTGCGTCGCCGTTTGTCGGTGGAT
EW717420       --> TCTCGTTCTCCTTCCTCTCTACGCTTCTGCGTCGCCGTTTGTCGGTGGAT
EW731672       --> TCTCGTTCTCCTTCCTCTCTACGCTTCTGCGTCGCCGTTTGTCGGTGGAT
EX890061       --> TCTCGTTCTCCTTCCTCTCTACGCTTCTGCGTCGCCGTTTGTCGGTGGAT
EY901039       --> TCTCGTTCTCCTTCCTCTCTACGCTTCTGCGTCGCCGTTTGTCGGTGGAT
EY948621       --> TCTCGTCCTCCTTCCTCTCTACGCTTCTGCGTCGCCGTTTGTCGGTGGAT
FD981359       --> TCTCGTTCACCTTCCTCTCTACGCTTCTGCGTCGCCGTTTGTCGGTGGAT
FD986310       --> TCTCGTTCTCCTTCCTCTCTACGCTTCTGCGTCGCCGTTTGTCGGTGGAT
FY431817       --> TCTCGTTCTCCTTCCTCTCTACGCTTCTGCGTCGCCGTTTGTCGGTGGAT
FY431554       --> TCTCGTTCTCCTTCCTCTCTACGCTTCTGCGTCGCCGTTTGTCGGTGGAT
FY442291       --> TCTCGTTCTCCTTCCTCTCTACGCTTCTGCGTCGCCGTTTGTCGGTGGAT

               151    -    201
UN09404        --> GGCGTCCCCTCAGAAACGTTAGTGACCCTCACGTCGTAGAGATCGGCGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720356       <-- GGCGTCCCCTCAGAAACGTTAGTGACCCTCACGTCGTAGAGATCGGGGAA
FD546893       <-- GGCGTCCCCTCA-AAACGTTAGTGACCCTCACGTCGTAGAGATCGGCGAA
EW721418       <-- GGCGTCCCCTCAGAAACGTTAGTGACCCTCACGTCGTAGAGATCGGCGAA
EX893652       <-- GGCGTCCCCTCAGAAACGTTAGTGACCCTCACGTCGTAGAGATCGGCGAA
FD977136       <-- GGCGTCCCCTCAGAAACGTTAGTGACCCTCACGTCGTAGAGATCGGCGAA
FD982585       <-- GGCGTCCCCTCAGAAACGTTAGTGACCCTCACGTCGTAGAGATCGGCGAA
FD550381       <-- ..................................................
FD546349       --> GGCGTCCCCTCAGAAACGTTAGTGACCCTCACGTCGTAAAGATCGGCGAA
EW715860       --> GGCGTCCCCTCAGAAACGTTAGTGACCCTCACGTCGTAGAGATCGGCGAA
FD551015       --> GGCGTCCCCTCA-AAACGTTAGTGACCCTCACGTCGTAGAGATCGGCGAA
FD534867       --> GGCGTCCCCTCAGAAACGTTAGTGACCCTCACGTCGTAGAGATCGGCGAA
EX762085       --> GGCGTCCCCTCAGAAACGTTAGTGACCCTCACGTCGTAGAGATCGGCGAA
EW717420       --> GGCGTCCCCTCAGAAACGTTAGTGACCCTCACGTCGTAGAGATCGGCGAA
EW731672       --> GGCGTCCCCTCAGAAACGTTAGTGACCCTCACGTCGTAGAGATCGGCGAA
EX890061       --> GGCGTCCCCTCAGAAACGTTAGTGACCCTCACGTCGTAGAGATCGGCGAA
EY901039       --> GGCGTCCCCTCAGAAACGTTAGTGACCCTCACGTCGTAGAGATCGGCGAA
EY948621       --> GGCGTCCCCTCAGAAACGTTAGTGACCCTCACGTCGTAGAGATCGGCGAA
FD981359       --> GGCGTCCCCTCAGAAACGTTAGTGACCCTCACGTCGTAGAGATCGGCGAA
FD986310       --> GGCGTCCCCTCAGAAACGTTAGTGACCCTCACGTCGTAGAGATCGGCGAA
FY431817       --> GGCGTCCCCTCAGAAACGTTAGTGACCCTCACGTCGTAGAGATCGGCGAA
FY431554       --> GGCGTCCCCTCAGAAACGTTAGTGACCCTCACGTCGTAGAGATCGGCGAA
FY442291       --> GGCGTCCCCTCAGAAACGTTAGTGACCCTCACGTCGTAGAGATCGGCGAA

               201    -    251
UN09404        --> TTCGCGGTCTCCGAGTACAACAAGCAGAGCAAATCGGGACTCAAGTTCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720356       <-- TTCGCGGTCTCCGAGTACAACAAGCAGAACAAGTCGGGACTCAAGTTCGT  Raphanus sativus var. oleiformis
FD546893       <-- TTCGCGGTCTCCGAGTACAACAAGCAGAGCAAGTCGGGACTCAAGTTCGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW721418       <-- TTCGCGGTCTCCGAGTACAACAAGCAGAGCAAGTCGGGACTCAAGTTCGT  Raphanus sativus var. oleiformis
EX893652       <-- TTCGCGGTCTCCGAGTACAACAAGCAGAGCAAGTCGGGACTCAAGTTCGT  Raphanus sativus var. oleiformis
FD977136       <-- TTCGCGGTCTCCGAGTACAACAAGCAGAGCAAATCGGGACTCAAGTTCGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982585       <-- TTCGCGGTCTCTGAGTACAACAAGCAGAGCAAATCGGGACTCAAGTTCGT  Raphanus raphanistrum subsp. landra
FD550381       <-- .TCGCGGTCTCCGAGTACAACAAGCAGAGCAAATCGGGACTCAAGTTCGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD546349       --> TTCGCGGTCTCCGAGTACAACAAGCAGAGCAAATCGGGACTCAAGTTCGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW715860       --> TTCGCGGTCTCCGAGTACAACAAGCAGAACAAGTCGGGACTCAAGTTCGT  Raphanus sativus var. oleiformis
FD551015       --> TTCGCGGTCTCCGAGTACAACAAGCAGAGCAAGTCGGGACTCAAGTTCGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD534867       --> TTCGCGGTCTCCGAGTACAACAAGCAGAGCAAATCGGGACTCAAGTTCGT  Raphanus raphanistrum subsp. maritimus
EX762085       --> TTCGCGGTCTCCGAGTACAACAAGCAGAGCAAATCGGGACTCAAGTTCGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW717420       --> TTCGCGGTCTCCGAGTACAACAAGCAGAGCAAGTCGGGACTCAAGTTCGT  Raphanus sativus var. oleiformis
EW731672       --> TTCGCGGTCTCCGAGTACAACAAGCAGAGCAAGTCGGGACTCAAGTTCGT  Raphanus sativus cv Rat-Tail Radish #3870
EX890061       --> TTCGCGGTCTCCGAGTACAACAAGCAGAGCAAGTCGGGACTCAAGTTCGT  Raphanus sativus var. oleiformis
EY901039       --> TTCGCGGTCTCCGAGTACAACAAGCAGAGCAAATCGGGACTCAAGTTCGT  Raphanus raphanistrum subsp. maritimus
EY948621       --> TTCGCGGTCTCCGAGTACAACAAGCAGAGCAAGTCGGGACTCAAGTTCGT  Raphanus sativus cv Rat-Tail Radish #3870
FD981359       --> TTCGCGGTCTCCGAGTACAACAAGCAGAGCAAATCGGGACTCAAGTTCGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD986310       --> TTCGCGGTCTCTGAGTACAACAAGCAGAGCAAATCGGGACTCAAGTTCGT  Raphanus raphanistrum subsp. landra
FY431817       --> TTCGCGGTCTCCGAGTACAACAAGCAGAGCAAATCGGGACTCAAGTTCGT  Raphanus sativus cv GSK3-1
FY431554       --> TTCGCGGTCTCCGAGTACAACAAGCAGAGCAAATCGGGACTCAAGTTCGT  Raphanus sativus cv GSK3-1
FY442291       --> TTCGCGGTCTCCGAGTACAACAAGCAGAGCAAATCGGGACTCAAGTTCGT  Raphanus sativus cv GSK3-1

               251    -    301
UN09404        --> GTCGGTTGTTAGCGGCGACTCTCAGGTAGTTGCCGGTACAAATTACCGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720356       <-- GTCGGTTGTTAGCGGCTACTCTCAGGTAGTTGCCGGTACAAATTACCGGC
FD546893       <-- GTCGGTTGTTAGCGGCGACTCTCAGGTAGTTGCCGGTACAAATTACCGGC
EW721418       <-- GTCGGTTGTTAGCGGCTACTCTCAGGTAGTTGCCGGTACAAATTACCGGC
EX893652       <-- GTCGGTTGTTAGCGGCGACTCTCAGGTAGTTGCCGGTACAAATTACCGGC
FD977136       <-- GTCGGTTGTTAGCGGCGACTCTCAGGTAGTTGCCGGTACAAATTACCGGC
FD982585       <-- GTCGGTTGCTAGCGGCGACTCTCAGGTAGTTGCCGGTACAAATTACCGGC
FD550381       <-- GTCGGTTGTTAGCGGCGACTCTCAGGTAGTTGCCGGTACAAATTACCGGC
FD546349       --> GTCGGTTGTTAGCGGCGACTCTCAGGTAGTTGCCGGTACAAATTACCGGC
EW715860       --> GTCGGTTGTTAGCGGCTACTCTCAGGTAGTTGCCGGTACAAATTACCGGC
FD551015       --> GTCGGTTGTTAGCGGCGACTCTCAGGTAGTTGCCGGTACAAATTACCGGC
FD534867       --> GTCGGTTGTTAGCGGCGACTCTCAGGTAGTTGCCGGTACAAATTACCGGC
EX762085       --> GTCGGTTGTTAGCGGCGACTCTCAGGTAGTTGCCGGTACAAATTACCGGC
EW717420       --> GTCGGTTGTTAGCGGCTACTCTCAGGTAGTTGCCGGTACAAATTACCGGC
EW731672       --> GTCGGTTGTTAGCGGCGACTCTCAGGTAGTTGCCGGTACAAATTACCGGC
EX890061       --> GTCGGTTGTTAGCGGCGACTCTCAGGTAGTTGCCGGTACAAATTACCGGC
EY901039       --> GTCGGTTGTTAGCGGCGACTCTCAGGTAGTTGCCGGTACAAATTACCGGC
EY948621       --> GTCGGTTGTTAGCGGCGACTCTCAGGTAGTTGCCGGTACAAATTACCGGC
FD981359       --> GTCGGTTGTTAGCGGCGACTCTCAGGTAGTTGCCGGTACAAATTACCGGC
FD986310       --> GTCGGTTGCTAGCGGCGACTCTCAGGTAGTTGCCGGTACAAATTACCGGC
FY431817       --> GTCGGTTGTTAGCGGCGATTCTCAGGTAGTTGCCGGTACAAATTACCGGC
FY431554       --> GTCGGTTGTTAGCGGCGATTCTCAGGTAGTTGCCGGTACAAATTACCGGC
FY442291       --> GTCGGTTGTTAGCGGCGATTCTCAGGTAGTTGCCGGTACAAATTACCGGC

               301    -    351
UN09404        --> TTATCGTGGCGGTTAATGATGGCGTAAAGATAGCCAATGCTGGTGCGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720356       <-- TTATCGTGGCGGTTAATGATGGCGTAAAGATAGCCAATGCTGGTGCGAGC
FD546893       <-- TTATCGTGGCGGCTAATGATGGCGTAAAGATAGCCAATGCTGGTGCGAGC
EW721418       <-- TTATCGTGGCGGTTAATGATGGCGTAAAGATAGCCAATGCTGGTGCGAGC
EX893652       <-- TTATCGTGGCGGTTAATGATGGCGTAAAGATAGCCAATGCTGGTGCGAGC
FD977136       <-- TTATCGTGGCGGTTAATGATGGCGTAAAGATAGCCAATGCTGGTGCGAGC
FD982585       <-- TTATCGTGGCGGTTAATGATGGCGTAAAGATAGCCAATGCTGGTGCGAGC
FD550381       <-- TTATCGTGGCGGTTAATGATGGCGTAAAGATAGCCAATGCTGGTGCGAGC
FD546349       --> TTATCGTGGCGGTTAATGATGGCGTAAAGATAGCCAATGCTGGTGCGAGC
EW715860       --> TTATCGTGGCGGTTAATGATGGCGTAAAGATAGCCAATGCTGGTGCGAGC
FD551015       --> TTATCGTGGCGGCTAATGATGGCGTAAAGATAGCCAATGCTGGTGCGAGC
FD534867       --> TTATCGTGGCGGTTAATGATGGCGTAAAGATAGCCAATGCTGGTGCGAGC
EX762085       --> TTATCGTGGCGGTTAATGATGGCGTAAAGATAGCCAATGCTGGTGCGAGC
EW717420       --> TTATCGTGGCGGTTAATGATGGCGTAAAGATAGCCAATGCTGGTGCGAGC
EW731672       --> TTATCGTGGCGGCTAATGATGGCGTAAAGATAGCCAATGCTGGTGCGAGC
EX890061       --> TTATCGTGGCGGTTAATGATGGCGTAAAGATAGCCAATGCTGGTGCGAGC
EY901039       --> TTATCGTGGCGGTTAATGATGGCGTAAAGATAGCCAATGCAGGTGCGAGC
EY948621       --> TTATCGTGGCGGCTAATGATGGCGTAAAGATAGCCAATGCTGGTGCGAGC
FD981359       --> TTATCGTGGCGGTTAATGATGGCGTAAAGATAGCCAATGCTGGTGCGAGC
FD986310       --> TTATCGTGGCGGTTAATGATGGCGTAAAGATAGCCAATGCTGGTGCGAGC
FY431817       --> TTATCGTGGCGGTTAATGATGGCGTAAAGATAGCCAATGCTGGTGCGAGC
FY431554       --> TTATCGTGGCGGTTAATGATGGCGTAAAGATAGCCAATGCTGGTGCGAGC
FY442291       --> TTATCGTGGCGGTTAATGATGGCGTAAAGATAGCCAATGCTGGTGCGAGC

               351    -    401
UN09404        --> AAGAACTACGAAGCGATTGTATGGGAGCAGCCTTGGTTAAAATCAAAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720356       <-- AAGAACTACGAAGCGATTGTATGGGAGCAGCCTTGGTTACATTCAAAGAA  Raphanus sativus var. oleiformis
FD546893       <-- AAGAACTACGAAGCGATTGTATGGGAGCAGCCTTGGTTAAAATCAAAGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW721418       <-- AAGAACTACGAAGCGATTGTATGGGAGCAGCCTTGGTTACATTCAAAGAA  Raphanus sativus var. oleiformis
EX893652       <-- AAGAACTACGAAGCGATTGTATGGGAGCAGCCTTGGTTAAAATCAAAGAA  Raphanus sativus var. oleiformis
FD977136       <-- AAGAACTACGAAGCGATTGTATGGGAGCAGCCTTGGTTAAAATCAAAGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982585       <-- AAGAACTACGAAGCGATTGTATGGGAGCAGCCTTGGTTACATTCAAAGAA  Raphanus raphanistrum subsp. landra
FD550381       <-- AAGAACTACGAAGCGATTGTATGGGAGCAGCCTTGGTTAAAATCAAAGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD546349       --> AAGAACTACGAAGCGATTGTAGGGGAGCAGCCTTGGTTAAAATCAAAGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW715860       --> AAGAACTACGAAGCGATTGTATGGGAGCAGCCTTGGTTACATTCAAAGAA  Raphanus sativus var. oleiformis
FD551015       --> AAGAACTACGAAGCGATTGTATGGGAGCAGCCTTGGTTAAAATCAAAGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD534867       --> AAGAACTACGAAGCGATTGTATGGGAGCAGCCTTGGTTAAAATCAAAGAA  Raphanus raphanistrum subsp. maritimus
EX762085       --> AAGAACTACGAAGCGATTGTATGGGAGCAGCCTTGGTTAAAATCAAAGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW717420       --> AAGAACTACGAAGCGATTGTATGGGAGCAGCCTTGGTTACATTCAAAGAA  Raphanus sativus var. oleiformis
EW731672       --> AAGAACTACGAAGCGATTGTATGGGAGCAGCCTTGGTTAAAATCAAAGAA  Raphanus sativus cv Rat-Tail Radish #3870
EX890061       --> AAGAACTACGAAGCGATTGTATGGGAGCAGCCTTGGTTAAAATCAAAGAA  Raphanus sativus var. oleiformis
EY901039       --> AAGAACTACGAAGCGATTGTATGGGAGCAGCCTTGGTTAAAATCAAAGAA  Raphanus raphanistrum subsp. maritimus
EY948621       --> AAGAACTACGAAGCGATTGTATGGGAGCAGCCTTGGTTAAAATCAAAGAA  Raphanus sativus cv Rat-Tail Radish #3870
FD981359       --> AAGAACTACGAAGCGATTGTATGGGAGCAGCCTTGGTTAAAATCAAAGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD986310       --> AAGAACTACGAAGCGATTGTATGGGAGCAGCCTTGGTTACATTCAAAGAA  Raphanus raphanistrum subsp. landra
FY431817       --> AAAAACTACGAAGCGATTGTATGGGAGCAGCCTTGGTTAAAATCAAAGAA  Raphanus sativus cv GSK3-1
FY431554       --> AAAAACTACGAAGCGATTGTATGGGAGCAGCCTTGGTTAAAATCAAAGAA  Raphanus sativus cv GSK3-1
FY442291       --> AAAAACTACGAAGCGATTGTATGGGAGCAGCCTTGGTTAAAATCAAAGAA  Raphanus sativus cv GSK3-1

               401    -    451
UN09404        --> TCTCACTTCTTTCAAGCCAGCCATGAACTAATGACTGTTTCCTCTTAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720356       <-- TCTCACCTCTTTCAAGCCAACCATGAACTAATGGCTGTTTCCTCTTAAGT  Raphanus sativus var. oleiformis
FD546893       <-- TCTCACTTCTTTCAAGCCAGCCATGAACTAATGACTGTTTCCTCTTAAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW721418       <-- TCTCACCTCTTTCAAGCCAGCCATGAACTAATGGCTGTTTCCTCTTAAGT  Raphanus sativus var. oleiformis
EX893652       <-- TCTCACTTCTTTCAAGCCAGCCATGAACTAATGACTGTTTCCTCTTAAGT  Raphanus sativus var. oleiformis
FD977136       <-- TCTCACTTCTTTCAAGCCAGCCATGAACTAATGACTGTTTCCTCTTAAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982585       <-- TCTCACCTCTTTCAAGCCAACCATGAACTAATGGCTGTTTCCTCTTAAGT  Raphanus raphanistrum subsp. landra
FD550381       <-- TCTCACTTCTTTCAAGCCAGCCATGGACTAATGACTGTTTCCTCTTAAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD546349       --> TCTCACTTCTTTCAAGCCAGCCATGGACTAATGACTGTTTCCTCTTAAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW715860       --> TCTCACCTCTTTCAAGCCAACCATGAACTAATGGCTGTTTCCTCTTAAGT  Raphanus sativus var. oleiformis
FD551015       --> TCTCACTTCTTTCAAGCCAGCCATGAACTAATGACTGTTTCCTCTTAAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD534867       --> TCTCACTTCTTTCAAGCCAGCCATGAACTAATGACTGTTTCCTCTTAAGT  Raphanus raphanistrum subsp. maritimus
EX762085       --> TCTCACTTCTTTCAAGCCAGCCATGAACTAATGACTGTTTCCTCTTAAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW717420       --> TCTCACCTCTTTCAAGCCAGCCATGAACTAATGGCTGTTTCCTCTTAAGT  Raphanus sativus var. oleiformis
EW731672       --> TCTCACTTCTTTCAAGCCAGCCATGAACTAATGACTGTTTCCTCTTAAGT  Raphanus sativus cv Rat-Tail Radish #3870
EX890061       --> TCTCACTTCTTTCAAGCCAGCCATGAACTAATGACTGTTTCCTCTTAAGT  Raphanus sativus var. oleiformis
EY901039       --> TCTCACTTCTTTCAAGCCAGCCATGAACTAATGACTGTTTCCTCTTAAGT  Raphanus raphanistrum subsp. maritimus
EY948621       --> TCTCACTTCTTTCAAGCCAGCCATGAACTAATGACTGTTTCCTCTTAAGT  Raphanus sativus cv Rat-Tail Radish #3870
FD981359       --> TCTCACTTCTTTCAAGCCAGCCATGAACTAATGACTGTTTCCTCTTAAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD986310       --> TCTCACCTCTTTCAAGCCAACCATGAACTAATGGCTGTTTCCTCTTAAGT  Raphanus raphanistrum subsp. landra
FY431817       --> TCTCACTTCTTTCAAGCCAGCCATGAACTAATGACTGTTTCCTCTTAAGT  Raphanus sativus cv GSK3-1
FY431554       --> TCTCACTTCTTTCAAGCCAGCCATGAACTAATGACTGTTTCCTCTTAAGT  Raphanus sativus cv GSK3-1
FY442291       --> TCTCACTTCTTTCAAGCCAGCCATGAACTAATGACTGTTTCCTCTTAAGT  Raphanus sativus cv GSK3-1

               451    -    501
UN09404        --> TCTCCATATGTAATGATCTGATAAAATACAGTAAAAAA-GTTAAATAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720356       <-- TCTCCATATGTAATGATCTGATAAAATACAGTAAAAAAAGTTAAATAAAC  Raphanus sativus var. oleiformis
FD546893       <-- TCTCCATATGTAATGATCTGATAAAATACAGTAAAAAA-GTTAAATAAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW721418       <-- TCTCCATATGTAATGATCTGATAAAATACAGTAAAAAAAGTTAAATAAAC  Raphanus sativus var. oleiformis
EX893652       <-- TCTCCATATGTAATGATCTGATAAAATACAGTAAAAAA-GTTAAATAAAC  Raphanus sativus var. oleiformis
FD977136       <-- TCTCCATATGTAATGATCTGATAAAATACAGTAAAAAA-GTTAAATAAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982585       <-- TCTCCATATGTAATGATCTGATAAAATACAGTAAAAAAAGTTAAATAAAC  Raphanus raphanistrum subsp. landra
FD550381       <-- TCTCCATATGTAATGATCTGATAAAATACAGTAAAAAA-GTTAAATAAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD546349       --> TCTCCATATGTAATGATCTGATAAAATACAGTAAAAAA-GTTAAATAAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW715860       --> TCTCCATATGTAATGATCTGATAAAATACAGTAAAAAAAGTTAAATAAAC  Raphanus sativus var. oleiformis
FD551015       --> TCTCCATATGTAATGATCTGATAAAATACAGTAAAAAA-GTTAAATAAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD534867       --> TCTCCATATGTAATGATCTGATAAAATACAGTAAAAAA-GTTAAATAAAC  Raphanus raphanistrum subsp. maritimus
EX762085       --> TCTCCATATGTAATGACCTGATAAAATACAGTAAAAAA-GTTAAATAAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW717420       --> TCTCCATATGTAATGATCTGATAAAATACAGTAAAAAAAGTTAAATAAAC  Raphanus sativus var. oleiformis
EW731672       --> TCTCCATATGTAATGATCTGATAAAATACAGTAAAAAA-GTTAAATAAAC  Raphanus sativus cv Rat-Tail Radish #3870
EX890061       --> TCTCCATATGTAATGATCTGATAAAATACAGTAAAAAA-GTTAAATAAAC  Raphanus sativus var. oleiformis
EY901039       --> TCTCCATATGTAATGATCTGATAAAATACAGTAAAAAA-GCTAAATAAAC  Raphanus raphanistrum subsp. maritimus
EY948621       --> TCTCCATATGTAATGATCTGATAAAATACAGTAAAAAA-GTTAAATAAAC  Raphanus sativus cv Rat-Tail Radish #3870
FD981359       --> TCTCCATATGTAATGATCTGATAAAATACAGTAAAAAA-GTTAAATAAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD986310       --> TCTCCATATGTAATGATCTGATAAAATACAGTAAAAAAAGTTAAATAAAC  Raphanus raphanistrum subsp. landra
FY431817       --> TCTCCATATGTAATGATCTGATAAAATACAGT..................  Raphanus sativus cv GSK3-1
FY431554       --> TCTCCATATGTAATGATCTGATAAAATACAGTAAAAAA-GTTAAATAAAC  Raphanus sativus cv GSK3-1
FY442291       --> TCTCCATATGTAATGATCTGATAAAATACAGTAAAAAA-GTTAAATAAAC  Raphanus sativus cv GSK3-1

               501    -    551
UN09404        --> AAAGAAGGAATTGAATTAATCTTGATTCCTGTATTTCTTTCTGATTTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720356       <-- AAAGAAGGAATTGAATTAATGTCGATTCCTGTATTTCTTTCTGATTTTCA  Raphanus sativus var. oleiformis
FD546893       <-- AA-GAAGGAATTGAATTAATCTTGATTCCTGTATTTCTTTCTGATTTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW721418       <-- AAAGAAGGAATTGAATTAATGTTGATTCCTGTA.................  Raphanus sativus var. oleiformis
EX893652       <-- AA-GAAGGAATTGAATTAATCTTGATTCCTGTATTTCTTTCgg.......  Raphanus sativus var. oleiformis
FD977136       <-- AAAGAAGGAATTGAATTAATCTTGATTCCTGTA.................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982585       <-- AAAGAAGGAATTGAATTAATGTTGATTCCTGTATTTCTTTCTGATTTTCA  Raphanus raphanistrum subsp. landra
FD550381       <-- AAAGAAGGAATTGAATTAATCTTAATTCCTGTATTTCTTTCTGATTTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD546349       --> AAAGAAGGAATTGAATTAATCTTAATTCCTGTATTTCTTTCTGATTTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW715860       --> AAAGAAGGAATTGAATTAATGTCGATTCCTGTATTTCTTTCTGATTTTCA  Raphanus sativus var. oleiformis
FD551015       --> AA-GAAGGAATTGAATTAATCTTGATTCCTGTATTTCTTTCTGATTTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD534867       --> AAAGAAGGAATTGAATTAATCTTGATTCCTGTATTTCTTTCT........  Raphanus raphanistrum subsp. maritimus
EX762085       --> AAAGAAGGAATTGAATTAATCTTGATTCCTGTATTTCTTTCTGATTTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW717420       --> AAAGAAGGAATTGAATTAATGTTGATTCCTGTA.................  Raphanus sativus var. oleiformis
EW731672       --> AA-GAAGGAATTGAATTAATCTTGATTCCTGTATTTCTTTCTGATTTTCA  Raphanus sativus cv Rat-Tail Radish #3870
EX890061       --> AA-GAAGGAATTGAATTAATCTTGATTCCTGTATTTCTTTCgg.......  Raphanus sativus var. oleiformis
EY901039       --> AAAGAAGGAATTGAATT.................................  Raphanus raphanistrum subsp. maritimus
EY948621       --> AA-GAAGGAATTGAATTAATCTTGATTCC.....................  Raphanus sativus cv Rat-Tail Radish #3870
FD981359       --> AAAGAAGGAATTGAATTAATCTTGATTCCTGTA.................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD986310       --> AAAGAAGGAATTGAATTAATGTTGATTCCTGTATTTCTTTCTGATTTTCA  Raphanus raphanistrum subsp. landra
FY431817       --> ..................................................  Raphanus sativus cv GSK3-1
FY431554       --> AAAGAAGGAATTGAATT.................................  Raphanus sativus cv GSK3-1
FY442291       --> AAAGAAGGAATTGAATT.................................  Raphanus sativus cv GSK3-1

               551    -    601
UN09404        --> AAATTTATGTTGTTGGGCGTAAACCCTAGATCTGATGCAAATGATTGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720356       <-- AAATTTATGTTGTTGGGCGTAAACCCTAGATCTGATGCAAATGATTGAAC
FD546893       <-- AAATTTATGTTGTTGGGCGTAAACC.........................
EW721418       <-- ..................................................
EX893652       <-- ..................................................
FD977136       <-- ..................................................
FD982585       <-- AAATTTATGTTGTTGGGCGTAAACCCTAGATCTGATGC............
FD550381       <-- AAATTTATGTTGTTGGGCGTAAACCCTAGATCTGATGCAAATGATTGAAC
FD546349       --> AAATTTATGTTGTTGGGCGTAAACCCTAGATCTGATGCAAATGATTGAAC
EW715860       --> AAATTTATGTTGTTGGGCGTAAACCCTAGATCTGATGCAAATGATTGAAC
FD551015       --> AAATTTATGTTGTTGGGCGTAAACC.........................
FD534867       --> ..................................................
EX762085       --> AAATTTATGTTGTTGGGCGTAAACCCTAGATCTGAc..............
EW717420       --> ..................................................
EW731672       --> AAATTTATGTTGTTGGGCGT..............................
EX890061       --> ..................................................
EY901039       --> ..................................................
EY948621       --> ..................................................
FD981359       --> ..................................................
FD986310       --> AAATTTATGTTGTTGGGCGTAAACCCTAGATCTGATGC............
FY431817       --> ..................................................
FY431554       --> ..................................................
FY442291       --> ..................................................

               601    -    651
UN09404        --> AAGTGGTGACAAATCCGCTAATTACGCCGGCTAATCTGATGTATAGATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720356       <-- AAGTGGTGACAAATCCGCTAATTACGCCGGCT..................
FD546893       <-- ..................................................
EW721418       <-- ..................................................
EX893652       <-- ..................................................
FD977136       <-- ..................................................
FD982585       <-- ..................................................
FD550381       <-- AAGTGGTGACAAATCCGATAATTACGCCGGCTAATCTGATGTATAGATTT
FD546349       --> AAGTGGTGACAAATCCGATAATTACGCCGGCTAATCTGATGTATAGATTT
EW715860       --> AAGTGGTGACAAATCCGCTAATTACGCCGGCT..................
FD551015       --> ..................................................
FD534867       --> ..................................................
EX762085       --> ..................................................
EW717420       --> ..................................................
EW731672       --> ..................................................
EX890061       --> ..................................................
EY901039       --> ..................................................
EY948621       --> ..................................................
FD981359       --> ..................................................
FD986310       --> ..................................................
FY431817       --> ..................................................
FY431554       --> ..................................................
FY442291       --> ..................................................

               651    -    701
UN09404        --> TGGAGTCACGAGACCATTGAGAGAATATATATCATTAAGAAATCAATTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720356       <-- ..................................................
FD546893       <-- ..................................................
EW721418       <-- ..................................................
EX893652       <-- ..................................................
FD977136       <-- ..................................................
FD982585       <-- ..................................................
FD550381       <-- TGGAGTCACGAGACCATTGAGAGAATATATATCATTAAGAAATCAATTAA
FD546349       --> TGGAGTCACGAGACCATTGAGAGAATATATATCATTAAGAAATCAATTAA
EW715860       --> ..................................................
FD551015       --> ..................................................
FD534867       --> ..................................................
EX762085       --> ..................................................
EW717420       --> ..................................................
EW731672       --> ..................................................
EX890061       --> ..................................................
EY901039       --> ..................................................
EY948621       --> ..................................................
FD981359       --> ..................................................
FD986310       --> ..................................................
FY431817       --> ..................................................
FY431554       --> ..................................................
FY442291       --> ..................................................

               701    -    751
UN09404        --> AAAAAGAGAAGAAATCTTCAATTATTTAATTATGTGAATTAGAATGTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720356       <-- ..................................................
FD546893       <-- ..................................................
EW721418       <-- ..................................................
EX893652       <-- ..................................................
FD977136       <-- ..................................................
FD982585       <-- ..................................................
FD550381       <-- AAAAAGAGAAGAAATCTTCAATTATTTAATTATGTGAATTAGAATGTCAA
FD546349       --> AAAA-GAGAAGAAATCTTCAATTATTTAATTATGTGAATTAGAATGTCAA
EW715860       --> ..................................................
FD551015       --> ..................................................
FD534867       --> ..................................................
EX762085       --> ..................................................
EW717420       --> ..................................................
EW731672       --> ..................................................
EX890061       --> ..................................................
EY901039       --> ..................................................
EY948621       --> ..................................................
FD981359       --> ..................................................
FD986310       --> ..................................................
FY431817       --> ..................................................
FY431554       --> ..................................................
FY442291       --> ..................................................

               751    -    801
UN09404        --> TTATTTGAAAAGAAGAAGTTACAAAGGAGGAGACACGAGATTACCACATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW720356       <-- ..................................................
FD546893       <-- ..................................................
EW721418       <-- ..................................................
EX893652       <-- ..................................................
FD977136       <-- ..................................................
FD982585       <-- ..................................................
FD550381       <-- TTATTTGAAAAGAAGAAGTTACAAAGGAGGAGACACGAGATTACCACATG
FD546349       --> TTATTTGAAAAGAAGAAGTTACAAAGGAGGAGACACGAGATTACCACATG
EW715860       --> ..................................................
FD551015       --> ..................................................
FD534867       --> ..................................................
EX762085       --> ..................................................
EW717420       --> ..................................................
EW731672       --> ..................................................
EX890061       --> ..................................................
EY901039       --> ..................................................
EY948621       --> ..................................................
FD981359       --> ..................................................
FD986310       --> ..................................................
FY431817       --> ..................................................
FY431554       --> ..................................................
FY442291       --> ..................................................

               801    -    851
UN09404        --> TGAGAGCC
                   ~~~~~~~~
EW720356       <-- ........
FD546893       <-- ........
EW721418       <-- ........
EX893652       <-- ........
FD977136       <-- ........
FD982585       <-- ........
FD550381       <-- TGAGAGCC
FD546349       --> TGAGAGCC
EW715860       --> ........
FD551015       --> ........
FD534867       --> ........
EX762085       --> ........
EW717420       --> ........
EW731672       --> ........
EX890061       --> ........
EY901039       --> ........
EY948621       --> ........
FD981359       --> ........
FD986310       --> ........
FY431817       --> ........
FY431554       --> ........
FY442291       --> ........