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Alignment for radish unigene UN09425

               1      -     51
UN09425        --> GGGTGGCAGATGTTTGAAACCAGTGGAGGAGAAGGAGAATGGGAGATCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD982712       <-- ..................................................
EY904559       <-- ..................................................
FD961559       <-- ..................................................
FD532420       <-- ..................................................
FD535503       <-- ..................................................
EW733811       <-- ..................................................
EY908949       --> GGGTGGCAGATGTTTGAAACCAGTGGAGGAGAAGGAGAATGGGAGATCTC
EV535929       --> ...................gCAGTGGAGGAGAAGGAGAATGGGAGATCTC
EY899377       --> ...................ggAGTGGAGGAGAAGGAGAATGGGAGATCTC
FD965967       --> ...................ggAGTGGAGGAGAAGGAGAATGGGAGATCTC
FD986138       --> ..................gggAGTGGAGGAGAAGGAGAATGGGAGATCTC
FD986458       --> ...................ggAGTGGAGGAGAATGAGAATGGGAGATCTC
FD954326       --> ......................ggGGAGGAGAAGGAGAATGGGAGATCTC
EY937870       --> .............................gGAAGGAGAATGGGAGATCTC
EY925191       --> .............................................ggCTC
FD550047       --> ..................................................
EW738912       --> ..................................................
FD531148       --> ..................................................

               51     -    101
UN09425        --> TACGCTCTGGACTTCGACGGAGTTCTCTGCGATAGTTGTGGTGAAAGCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD982712       <-- ..................................................
EY904559       <-- ..................................................
FD961559       <-- ..................................................
FD532420       <-- ..................................................
FD535503       <-- ..................................................
EW733811       <-- ..................................................
EY908949       --> TACGCTCTGGACTTCGACGGAGTTCTCTGCGATAGTTGTGGCGAAAGCTC
EV535929       --> TACGCTCTGGACTTCGACGTAGTTCTCTGCGATAGTTGTGGCGAAAGCTC
EY899377       --> TACGCTCTGGACTTCGACGGAGTTCTCTGCGATAGTTGTGGCGAAAGCTC
FD965967       --> TACGCTCTGGACTTCAACGGAGTTCTCTGCGATAGTTGTGGCGAAAGCTC
FD986138       --> TACGCTCTGGACTTCGACGGAGTTCTCTGCGATAGTTGTGGCGAAAGCTC
FD986458       --> TACGCTCTAGACTTCGACGGAGTTCTCTGCGATAGTTGTGGTGAAAGCTC
FD954326       --> TACGCTCTAGACTTCGACGGAGTTCTCTGCGATAGTTGTGGTGAAAGCTC
EY937870       --> TACGCTCTAGACTTCGACGGAGTTCTCTGCGATAGTTGTGGTGAAAGCTC
EY925191       --> TACGCTCTAGACTTCGACGGAGTTCTCTGCGATAGTTGTGGTGAAAGCTC
FD550047       --> ......ggaGACTTCGACGGAGTTCTCTGCGATAGTTGTGGTGAAAGCTC
EW738912       --> ..................................................
FD531148       --> ..................................................

               101    -    151
UN09425        --> TCTCTCTGCTGTTAAGGCTGCGAGAGCGAGGTGGCCTGGTCTGTTCCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD982712       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY904559       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD961559       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD532420       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD535503       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW733811       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY908949       --> TCTCTCTGCTGTTAAGGCTGCGAGAGCGAGGTGGCCTGGTTTGTTCCAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535929       --> TCTCTCTGCTGTTAAGGCTGCGAGAGCGAGGTGGCCTGGTTTGTTCCAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY899377       --> TCTCTCTGCTGTTAAGGCTGCGAGAGCGAGGTGGCCTGGTCTGTTCCAAG  Raphanus raphanistrum subsp. maritimus
FD965967       --> TCTCTCTGCTGTTAAGGCTGCGAGAGCGAGGTGGCCTGGTCTGTTCCAAG  Raphanus raphanistrum subsp. maritimus
FD986138       --> TCTCTCTGCTGTTAAGGCTGCGAGAGCGAGATGGCCTGGTTTGTTCCAAG  Raphanus raphanistrum subsp. landra
FD986458       --> TCTCTCTGCTGTTAAGGCTGCGAGAGCGAGGTGGCCTGGTCTGTTCCAAG  Raphanus raphanistrum subsp. landra
FD954326       --> TCTCTCTGCTGTTAAGGCTGCGAGAGCGAGGTGGCCTGGTTTGTTCCAAG  Raphanus sativus cv Rat-Tail Radish #3870
EY937870       --> TCTCTCTGCTGTTAAGGCTGCGAGAGCGAGGTGGCCTGGTCTGTTCCAAG  Raphanus sativus cv Early Scarlet Globe
EY925191       --> TCTCTCTGCTGTTAAGGCTGCGAGAGCGAGGTGGCCTGGTCTGTTCCAAG  Raphanus raphanistrum subsp. landra
FD550047       --> TCTCTCTGCTGTTAAGGCTGCGAGAGCGAGGTGGCCTGGTCTGTTCCAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW738912       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD531148       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               151    -    201
UN09425        --> GAGTTGACTCAGCTTTAGAGGAATGGATCGTTGATCAGATGCATATTGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD982712       <-- ................................................TG
EY904559       <-- ..................................................
FD961559       <-- ..................................................
FD532420       <-- ..................................................
FD535503       <-- ..................................................
EW733811       <-- ..................................................
EY908949       --> GAGTTGACTCAGCTTTAGAGGAATGGATCGTTGACCAGATGCATATTGTG
EV535929       --> GAGTTGACTCAGCTTTAGAGGAATGGATCGTTGACCAGATGCATATTGTG
EY899377       --> GAGTTGACTCAGCTTTAGAGGAATGGATCGTTGATTAGATGCATATTGTG
FD965967       --> GAGTTGACTCAGCT....................................
FD986138       --> GAGTTGACTCAGCTTTAGAGGAATGGATCGTTGATCAGATGCATATTGTG
FD986458       --> GAGTTGACTCAGCTTTAGAGGAATGGATCGTTGATCAGATGCATATTGTG
FD954326       --> GAGTTGACTCAGCTTTAGAGGAATGGATCGTTAATCAGATGCATATTGTG
EY937870       --> GAGTTGACTCAGCTTTAGAGGAATGGATCGTTGATCAGATGCATATTGTG
EY925191       --> GAGTTGACTCAGCTTTAGAGGAATGGATCGTTGATCAGATGCATATTGTG
FD550047       --> GAGTTGACTCAGCTTTAGAGGAATGGATCGTTGATCAGATGCATATTGTG
EW738912       --> ..................................................
FD531148       --> ..................................................

               201    -    251
UN09425        --> AGACCTGTGGTGGAAACTGGCTATGAAAATCTTCTGCTTGTTCGTCTACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD982712       <-- AGACC-GTGGTGGAAACTGGCTATGAAAATCTTCTGCTTGTTCGTCTACT
EY904559       <-- ..................................................
FD961559       <-- ..................................................
FD532420       <-- ..................................................
FD535503       <-- ..................................................
EW733811       <-- ..................................................
EY908949       --> AGACCTGTGGTGGAAACTGGCTATGAAAATCTTCTGCTTGTTCGTCTACT
EV535929       --> AGACCTGTGGTGGAAACTGGCTATGAAAATCTTCTGCTTGTTCGTCTACT
EY899377       --> AGACCTGTGGTGGAAACCGGCTATGAAAATCTTCTGCTTGTTCGTCTACT
FD965967       --> ..................................................
FD986138       --> AGACCTGTAGTGGAAACTGGCTATGAAAATCTTCTGCTTGTTCGTCTACT
FD986458       --> AGACCTGTGGTGGAAACTGGCTATGAAAATCTTCTGCTTGTTCGTCTACT
FD954326       --> AGACCTGTGGTGGAAACTGGCTATGAAAATCTTCTGCTTGTTCGTCTACT
EY937870       --> AGACCTGTGGTGGAAACTGGCTATGAAAATCTTCTGCTTGTTCGTCTACT
EY925191       --> AGACCTGTGGTGGAAACTGGCTATGAAAATCTTCTGCTTGTTCGTCTACT
FD550047       --> AGACCTGTGGTGGAAACTGGCTATGAAAATCTTCTGCTTGTTCGTCTACT
EW738912       --> ..................................................
FD531148       --> ..................................................

               251    -    301
UN09425        --> GTTGGAGACTAAGATGCCCTCTATTCGAAAATCTTCAGTTGCAGAGGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD982712       <-- GTTGGAGACTAAGATGCCCTCTATTCGAAAATCTTCAGTTGCAGAGGGAT
EY904559       <-- ...........................AAAATCTTCAGTTGCAGAGGGAT
FD961559       <-- ..................................................
FD532420       <-- ..................................................
FD535503       <-- ..................................................
EW733811       <-- ..................................................
EY908949       --> GTTGGAGACTAAGATGCCCTCTATTCGAAAATCTTCAGTTGCAGAGGGAT
EV535929       --> GTTGGAGACTAAGATGCCCTCTATTCGAAAATCTTCAGTTGCAGAGGGAT
EY899377       --> GTTGGAGACTAAGATGCCGTCTATTCGAAAATCTTCAGTTGCAGAGGGAT
FD965967       --> ..................................................
FD986138       --> GTTGGAGACTAAGATGCCCTCTATTCGGAAATCTTCAGTTGCAGAGGGAT
FD986458       --> GTTGGAGACTAAGATGCCCTCTATTCGAAAATCTTCAGTTGCAGAGGGAT
FD954326       --> GTTGGAGACGAAGATGCCCTCTATTCGAAAATCGTCAGTTGCAGAGGGAT
EY937870       --> GTTGGAGACTAAGATGCCCTCTATTCGGAAATCTTCAGTTGCAGAGGGAT
EY925191       --> GTTGGAGACTAAGATGCCCTCTATTCGAAAATCTTCAGTTGCAGAGGGAT
FD550047       --> GTTGGAGACTAAGATGCCCTCTATTCGAAAATCTTCAGTTGCAGAGGGAT
EW738912       --> ..................................................
FD531148       --> ..................................................

               301    -    351
UN09425        --> TGACTGTTGATGGGATATTGGAGAGCTGGGGAAAGATTAAGCCGGTTATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD982712       <-- TGACTGCTGATGGGATATTGGAGAGCTGGGGAAAGATTAAGCCGGTTATC
EY904559       <-- TGACTGTTGATGGGATATTGGAGAGCTGGGGAAAGATTAAGCCGGTTATC
FD961559       <-- ..................................................
FD532420       <-- ..................................................
FD535503       <-- ..................................................
EW733811       <-- ..................................................
EY908949       --> TGACTGTTGATGGGATATTGGAGAGCTGGGGAAAGATTAAGCCGGTTATC
EV535929       --> TGACTGTTGATGGGATATTGGAGAGCTGGGGAAAGATTAAGCCGGTTATC
EY899377       --> TGACTGTTGATGGGATATTGGAGAGCTGGGGAAAGATTAAACCGGTTATC
FD965967       --> ..................................................
FD986138       --> TGACTGTTGATGGGATATTGGAGAGCTGGGGAAAGATTAAGCCGGTTATC
FD986458       --> TGACTGCTGATGGGATATTGGAGAGCTGGGGAAAGATTAAGCCGGTTATC
FD954326       --> TGACTGTTGATGGGATATTGGAGAGCTGGGGAAAGATTAAGCCGGTTATC
EY937870       --> TGACTGTTGATGGGATATTGGAGAGCTGGGGAAAGATTAAGCCGGTTATC
EY925191       --> TGACTGTTGATGGGATATTGGAGAGCTGGGGAAAGATTAAGCCGGTTATC
FD550047       --> TGACTGTTGATGGGATATTGGAGATCTGGGGAA.................
EW738912       --> ..................................................
FD531148       --> ..................................................

               351    -    401
UN09425        --> ATGGAAGCTTGGGGTGAAGAAGATAAAGAAGCTTTGATCGATTTGTTTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD982712       <-- ATGGAAGCTTGGGGCGAAGAAGATAAAGAAGCTTTGATCGATTTGTTTGG
EY904559       <-- ATGGAAGCTTGGGGTGAAGAAGATAAAGAAGCTTTGATCGATTTGTTTGG
FD961559       <-- ..................................................
FD532420       <-- ..................................................
FD535503       <-- ..................................................
EW733811       <-- ..................................................
EY908949       --> ATGGAAGCTTGGGGTGAAGAAGATAAAGAAGCTTTGATCGATTTGTTTGG
EV535929       --> ATGGAAGCTTGGGGTGAAGAAGATAAAGAAGCTTTGATCGATTTGTTTGG
EY899377       --> ATGGAAGCTTGGGGTGAAGAAGATAAAGAAGCTTTGATCGATTTGTTTGG
FD965967       --> ..................................................
FD986138       --> ATGGAAGCTTGGGGTGAAGAAGATAAAGATGCTTTGATCGATTTGTTTGG
FD986458       --> ATGGAAGCTTGGGGCGAAGAAGATAAAGAAGCTTTGATCGATTTGTTTGG
FD954326       --> ATGGAGGCTTGGGGTGAAGAAGATAAAGAAGCTTTGATCGATTTGTTTGG
EY937870       --> ATGGAAGCTTGGGGTGAAGAAGATAAAGAAGCTTTGATCGATTTGTTTGG
EY925191       --> ATGGAAGCTTGGGGTGAAGAAGATAAAGAAGCTTTGATCGATTTGTTTGG
FD550047       --> ..................................................
EW738912       --> ..................................................
FD531148       --> ..................................................

               401    -    451
UN09425        --> TAAAGTTAGAGATGATTGGATTAACAATGACTTGACTACTTGGATTGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD982712       <-- TAAAGTTAGAGATGATTGGATTAACAATGACTTGACTACTTGGATTGGTG
EY904559       <-- TAAAGTTAGAGATGATTGGATTAACAATGACTTGACTACTTGGATTGGTG
FD961559       <-- ..................................................
FD532420       <-- ..................................................
FD535503       <-- ..................................................
EW733811       <-- ..................................................
EY908949       --> TAAAGTTAGAGATGATTGGATTAACAATGACTTGACTACTTGGATTGGTG
EV535929       --> TAAAGTTAGAGATGATTGGATTAACAATGACTTGACTACTTGGATTGGTG
EY899377       --> TAAAGTTAGAGATGATTGGAATAACAATGACTTGACTACTTGGATTGGTG
FD965967       --> ..................................................
FD986138       --> TAAAGTTAGAGATGATTGGATTAACAATGACTTGACTACTTGGATTGGTG
FD986458       --> TAAAGTTAGAGATGATTGGATTAACAATGACTTGACTACTTGGATTGGTG
FD954326       --> TAAAGTTAGAGATGATTGGATTAACAATGACTTGACTACTTGGATTGGTG
EY937870       --> TAAAGTTAGAGATGATTGGATTAACAATGACTTGACTACTTGGATTGGTG
EY925191       --> TAAAGTTAGAGATGATTGGATTAACAATGACTTGACTACTTGGATTGGTG
FD550047       --> ..................................................
EW738912       --> ..................................................
FD531148       --> ..................................................

               451    -    501
UN09425        --> CCAATAGATTCTATCCAGGAGTATCAGATGCATTGAAGTTTGCCAGCTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD982712       <-- CCAATAGATTCTATCCAGGAGTATCAGATGCATTGAAGTTTGCCAGCTCA
EY904559       <-- CCAATAGATTCTATCCAGGAGTATCAGATGCATTGAAGTTTGCCAGCTCA
FD961559       <-- ..................................................
FD532420       <-- ..................................................
FD535503       <-- ..................................................
EW733811       <-- ..................................................
EY908949       --> CCAATAGATTCTATCCAGGAGTATCAGATGCATTGAAGTTTGCCAGCTCA
EV535929       --> CCAATAGATTCTATCCAAGAGTATCAGATGCATTGAAGTTTGCCAGCTCA
EY899377       --> CCAATAGATTCTATCCAGGAGTATCAGATGCATTGAAGTTTGCCAGCTCA
FD965967       --> ..................................................
FD986138       --> CCAATAGATTCTATCCAGGAGTATCAGATGCATTGAAGTTTGCCAGCTCA
FD986458       --> CCAATAGATTCTATCCAGGAGTATCAGATGCATTGAAGTTTGCCAGCTCA
FD954326       --> CCAATAGATTCTATCCAGGAGTATCAGATGCATTGAAGTTTGCCAGCTCA
EY937870       --> CCAATAGATTCCATCCAGGAGTATCAGATGCATTGAAGTTTGCCAGCTCA
EY925191       --> CCAATAGATTCTATCCAGGAGTATCAGATGCATTGAAGTTTGCCAGCTCA
FD550047       --> ..................................................
EW738912       --> ..................................................
FD531148       --> ..................................................

               501    -    551
UN09425        --> AAGATTTACATTGTTACCACGAAACAGGGCCGGTTTGCAGAAGCGTTACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD982712       <-- AAGATTTACATTGTTACCACGAAACAGGGCCGGTTTGCAGAAGCGTTACT
EY904559       <-- AAGATTTACATTGTTACC--AAAACAGGGCCGGTTTGCAGAAGCGTTGCT
FD961559       <-- ..................................................
FD532420       <-- ..................................................
FD535503       <-- ..................................................
EW733811       <-- ..................................................
EY908949       --> AAGATTTACATTGTTACCA--AAACAGGGCCGGTTTGCAGAAGCGTTGCT
EV535929       --> AAGATTTACATTGTTACCACGAAACAGGGCCGGTTTGCAGAAGCGTTGCT
EY899377       --> AAGATTTACATTGTTACCACGAAACAGGGCCGGTTTGCAGAAGCGTTACT
FD965967       --> ..................................................
FD986138       --> AAGATTTACATTGTTACCACGAAACAGGGCCGGTTTGCAGAAGCGTTACT
FD986458       --> AAGATTTACATTGTTACCACGAAACAGGGCCGGTTTGCAGAAGCGTTACT
FD954326       --> AAGATTTACATTGTTACCACCAAACAGGGCCGGTTTGCAGAAGCGTTACT
EY937870       --> AAGATTTACATTGTTACCACGAAACAGGGCCGGTTTGCAGAAGCGTTACT
EY925191       --> AAGATTTACATTGTTACCACGAAACAGGGCCGGTTTGCAGAAGCGTTACT
FD550047       --> ..................................................
EW738912       --> ..................................................
FD531148       --> ..................................................

               551    -    601
UN09425        --> ACGTGAAATAGCAGGTGTGATCATACCACCAGAAAGGATCTATGGTCTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD982712       <-- ACGTGAAATAGCAGGTGTGATCATACCACCAGAAAGGATCTATGGTCTGG
EY904559       <-- ACGTGAAATAGCAGGTGTGATCATACCACCAGAAAGGATCTATGGTCTGG
FD961559       <-- ..................................................
FD532420       <-- ..................................................
FD535503       <-- ..................................................
EW733811       <-- ..................................................
EY908949       --> ACGTGAAATA........................................
EV535929       --> ACGTGAAATAGCAGGTGTGATCATACCACCAGAAAGGATCTATGGTCTGG
EY899377       --> ACGTGAAATAGCAGGTGTGATCATACCACCAGAAAGGATCTATGGTCTGG
FD965967       --> ..................................................
FD986138       --> ACGTGAAATAGCAGGTGTGATCATACCACCAGAAAGGATCTATGGTCTGG
FD986458       --> ACGTGAAATAGCAGGTGTGATCATACCACCAGAAAGGATCTATGGTCTGG
FD954326       --> ACGTGAAATAGCAGGTGTGATCATACCACCAGAAAGGATCTATGGTCTGG
EY937870       --> ACGTGAAATAGCAGGTGTGATCATACCACCAGAAAGGATCTATGGTCTGG
EY925191       --> ACGTGAAATAGCAGGTGTGATCATACCACCAGAAAGGATCTATGGTCTGG
FD550047       --> ..................................................
EW738912       --> ..................................................
FD531148       --> ..................................................

               601    -    651
UN09425        --> G-TACAGGCCCAAAGGTGGAAGTGCTAAAGCTACTTCAGAACAAACCAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD982712       <-- G-TACAGGCCCAAAGGTGGAAGTGCTAAAGCTACTTCAGAACAAACCAGA
EY904559       <-- G-TACAGGGCCAAAGGTGGAAGTGCTAAAGTTACTTCAGAACAAACCAGA
FD961559       <-- ..................................................
FD532420       <-- ..................................................
FD535503       <-- ..................................................
EW733811       <-- ..................................................
EY908949       --> ..................................................
EV535929       --> GGTACAGGGCCAAAGGTGGAAGTGCTAAAGTTACTTCAGAACAAACCAGA
EY899377       --> G-TACAGGCCCAAAGGTGGAAGTGCTAAAGCTACTTCAGAACAAACCAGA
FD965967       --> ..................................................
FD986138       --> G-TACAGGgc........................................
FD986458       --> G-TACAGGCCCAAAGGTGGAAGTGCTAAAGCTACTTCAGAACAAACCAGA
FD954326       --> G-TACAGGCCCAAAG-TGGAAGTGCTAAAGCTACTTCAGAACAAACCAGA
EY937870       --> G-TACAGGGCCAAAGGTGGAAGTGCTAAAGCTAC................
EY925191       --> G-TACAGGCCCAAAGGTGGAAGTGCTAAAGCTACTTCAGAACAA-CCAGA
FD550047       --> ..................................................
EW738912       --> ..................................................
FD531148       --> ..................................................

               651    -    701
UN09425        --> GCACCAGGGCTTGAAGCTGCATTTCGTGGAA-GACAGACTCGCAACGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD982712       <-- GCACCAGGGCTTGAAGCTGCATTTCGTGGAA-GACAGACTCTCAACGCTG  Raphanus raphanistrum subsp. landra
EY904559       <-- GCATCAGGGCTTGAAGCTGCATTTCGTGGAA-GACAGACTCGCAACGCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD961559       <-- ...................CATTTCGTGGAA-GACAGACTCGCAACGTTG  Raphanus raphanistrum subsp. maritimus
FD532420       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD535503       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW733811       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY908949       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV535929       --> GCATCAGGGCTTGAAGCTGCATTTCGTGGAAAGACAGACTCGCAACGCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY899377       --> GCACCAGGGCTTGAAGCTGCATTTCGTGGAA-GACAGACTCGCAACGCTG  Raphanus raphanistrum subsp. maritimus
FD965967       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD986138       --> ..................................................  Raphanus raphanistrum subsp. landra
FD986458       --> GCACCAGGGCTTGAAGCTGCATTTCGTGGAA-GACAGACTCTC-ACGCTG  Raphanus raphanistrum subsp. landra
FD954326       --> GCATCAGGctt.......................................  Raphanus sativus cv Rat-Tail Radish #3870
EY937870       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY925191       --> GCACCAGGGCTTGAAGCTGCATTTCGTGGAA-GACAGACTCGCAACGCTG  Raphanus raphanistrum subsp. landra
FD550047       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW738912       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD531148       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               701    -    751
UN09425        --> AAGAATGTCATCAAAGAGCCTGAACTAGACAAATGGAATCTATACCTAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD982712       <-- AAGAATGTCATCAAAGAGCCTGAACTAGACAAATGGAATCTATACCTAAG
EY904559       <-- AAGAATGTCATCAAAGAGCCTGAACTAGACAAATGGAATCTATACCTAAG
FD961559       <-- AAGAATGTCATCAAAGAGCCTGAACTAGACAAATGGAATCTATACCTAAG
FD532420       <-- ..................................................
FD535503       <-- ..................................................
EW733811       <-- ..................................................
EY908949       --> ..................................................
EV535929       --> AAGAATGTCATCAAAGAGCCTGAACTAGACAAATGGAATCTATACCTAAG
EY899377       --> AAGAATGTCATCAAAGAGCCTGAACTAGACAAATGGAATCTATACCTAAG
FD965967       --> ..................................................
FD986138       --> ..................................................
FD986458       --> AAGA-TGTCATCAAAGAGCCTGAACTAGACAA-TGG-ATCTATACCTAAG
FD954326       --> ..................................................
EY937870       --> ..................................................
EY925191       --> AAGAATGTCATCAAAGAGCCTGAACTAGACAAATGGAATCTATACCTAAG
FD550047       --> ..................................................
EW738912       --> ..................................................
FD531148       --> ..................................................

               751    -    801
UN09425        --> TAACTGGGGCTACAACACAGAGAAAGAAAGAGCAGAGGCAGAGAGCATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD982712       <-- TAACTGGGGCTACAACACAGAGAAAGAAAGAGCAGAGGCAGAGAGCATTC
EY904559       <-- TAACTGGGGCTACAACACGGAGAAAGAAAGAGCAGAGGCAGAAAGCATTC
FD961559       <-- TAACTGGGGTTACAACACAGAGGAAGAAAGAGCAGAGGCAGAGAGCATTC
FD532420       <-- ...............................................TTC
FD535503       <-- ..................................................
EW733811       <-- ..................................................
EY908949       --> ..................................................
EV535929       --> TAACTGGGGCTACAACACGGAGAAAGAAAGAGCAGAG-CAGAAAGCATTC
EY899377       --> TAACTGGGGCTACA-CACAGAGAAAGAAAGAGCAGAGG-AGAGAGCAT-C
FD965967       --> ..................................................
FD986138       --> ..................................................
FD986458       --> TAACTGGGGCTACA-CACAGAGAAgaagagc...................
FD954326       --> ..................................................
EY937870       --> ..................................................
EY925191       --> TAAC..............................................
FD550047       --> ..................................................
EW738912       --> .................................................C
FD531148       --> ..................................................

               801    -    851
UN09425        --> CAAGAATTCAGGTTATTGAGCTTTCCACATTTAGCAATAAGCTTAAATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD982712       <-- CAAGAATTCAGGTTATTGAGCTTTCCACATTTAGCAATAAGCTTAAATGA
EY904559       <-- CAAGAATTCAGGTTATTGAGCTTTCCACGTTTAGCAATAAGCTTAAATGA
FD961559       <-- CAAGAATTCAGGTTATTGAGCTTTCCACATTTAGCAATAAGCTTAAATGA
FD532420       <-- CAAGAATTCAGGTTATTGAGCTTTCCACATTTAGCAATAAGCTTAAATGA
FD535503       <-- ..................................................
EW733811       <-- ..................................................
EY908949       --> ..................................................
EV535929       --> CAAGAAT...........................................
EY899377       --> CAAGAAT...........................................
FD965967       --> ..................................................
FD986138       --> ..................................................
FD986458       --> ..................................................
FD954326       --> ..................................................
EY937870       --> ..................................................
EY925191       --> ..................................................
FD550047       --> ..................................................
EW738912       --> CAAGAATTCAGGTTATTGAGCTTTCCACATTTAGCAATAAGCTTAAATGA
FD531148       --> ..................................................

               851    -    901
UN09425        --> GT-CCATACTCATCAGAAAGAAAAAAACAAGCTTCCCTTTTCATTGTATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD982712       <-- GT-CCATACTCATCAGAAAGAAAAAAACAAGCTTCCCTTTTCATTGTATT
EY904559       <-- GTGGCATACTCATCAG..................................
FD961559       <-- GT-CCATACTCATCAGAAAGAAAAAAACAAGCTTCCCTTTTCATTGTATT
FD532420       <-- GT-CCATACTCATCAGAAAGAAAAAAACAAGCTTCCCTTTTCATTGTATT
FD535503       <-- ..................................................
EW733811       <-- ..................................................
EY908949       --> ..................................................
EV535929       --> ..................................................
EY899377       --> ..................................................
FD965967       --> ..................................................
FD986138       --> ..................................................
FD986458       --> ..................................................
FD954326       --> ..................................................
EY937870       --> ..................................................
EY925191       --> ..................................................
FD550047       --> ..................................................
EW738912       --> GT-CCATACTCATCAGAAAGAAAAAAACAGGCTTCCCTTTTCATTGTATT
FD531148       --> ..................................................

               901    -    951
UN09425        --> CTACAAGCCAAACATGTCAAAGAAACTGTAGCTACGATTCAGCTAAAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD982712       <-- CTACAAGCCAAACATGTCAAAGAAACTGTAGCTACGATTCAGCTAAAAGA
EY904559       <-- ..................................................
FD961559       <-- TTACAAGCCAAA......................................
FD532420       <-- CTACAAGCCAAACATGTCAAAGAAACTGTAGCTACGATTCAGCTAAAAGA
FD535503       <-- ................TCAAAGAAACTGTAGCTACGATTCAGCTAAAAGA
EW733811       <-- ..................................................
EY908949       --> ..................................................
EV535929       --> ..................................................
EY899377       --> ..................................................
FD965967       --> ..................................................
FD986138       --> ..................................................
FD986458       --> ..................................................
FD954326       --> ..................................................
EY937870       --> ..................................................
EY925191       --> ..................................................
FD550047       --> ..................................................
EW738912       --> CTACAAGCCAAACATGTCAAAGAAACTGTAGCTACGATTCAGCTAAAAGA
FD531148       --> .....................................TTCAGCTAAAAAA

               951    -   1001
UN09425        --> GATAAACTTTTCCATCTCATAACTCATCCTTGTTGACATCATTGTTGCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD982712       <-- GATAAACTTTTCCATCTCATAACac.........................
EY904559       <-- ..................................................
FD961559       <-- ..................................................
FD532420       <-- GATAAACTTTTCCATCTCATAACTCATCCTTGTTGACATCATTGTTGCTA
FD535503       <-- GATAAACTTTTCCATCTCATAACTCATC-TTGTTGACATCATTGTTGCTA
EW733811       <-- ..................................................
EY908949       --> ..................................................
EV535929       --> ..................................................
EY899377       --> ..................................................
FD965967       --> ..................................................
FD986138       --> ..................................................
FD986458       --> ..................................................
FD954326       --> ..................................................
EY937870       --> ..................................................
EY925191       --> ..................................................
FD550047       --> ..................................................
EW738912       --> GATAAACTTTTCCATCTCATAACTCATCCTTGTTAACATCATTGTTGCTA
FD531148       --> AATAAACTTTTCCATCTCATAACTCATCCTTGTTGACATCATTGTTGCTA

               1001   -   1051
UN09425        --> TTACCATCACTATCTTCATCATCCTTGCTCTGCTTAGCTTTAAGTTTGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD982712       <-- ..................................................
EY904559       <-- ..................................................
FD961559       <-- ..................................................
FD532420       <-- TTACCATCACTATCTTCATCATCCTTGCTCTGCTTAGCTTTAAGTTTGTC
FD535503       <-- TTACCATCACTATCTTCATCATCCTTGCTCTGCTTAGCTTTAAGTTTGTC
EW733811       <-- ..................................................
EY908949       --> ..................................................
EV535929       --> ..................................................
EY899377       --> ..................................................
FD965967       --> ..................................................
FD986138       --> ..................................................
FD986458       --> ..................................................
FD954326       --> ..................................................
EY937870       --> ..................................................
EY925191       --> ..................................................
FD550047       --> ..................................................
EW738912       --> TTACCATCACTATCTTCATCATCCTTGCTCTGCTTAGCTTTAAGTTTGTC
FD531148       --> TTACCATCACTATCTTCATCATCCTTGCTCTGCTTAGCTTTAAGTTTGTC

               1051   -   1101
UN09425        --> AACGACATCATCAAGAGGAGGATCACCAGGTCTTCGAAACTCTTGTTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD982712       <-- ..................................................
EY904559       <-- ..................................................
FD961559       <-- ..................................................
FD532420       <-- AACGACATCATCAAGAGGAGGATCACCAGGTCTTCGAAACTCTTGTTTCC
FD535503       <-- AACGACATCATCAAGAGGAGGATCACCAGGTCTTCGAAACTCTTGTTTCC
EW733811       <-- ...........CAAGAGGAGGATCACCAGGTCTTCGAAACTCTTGTTTCC
EY908949       --> ..................................................
EV535929       --> ..................................................
EY899377       --> ..................................................
FD965967       --> ..................................................
FD986138       --> ..................................................
FD986458       --> ..................................................
FD954326       --> ..................................................
EY937870       --> ..................................................
EY925191       --> ..................................................
FD550047       --> ..................................................
EW738912       --> AACGACATCATCAAGAGGAGGATCACCAGGTCTTCGAAACTCTTGTTTCC
FD531148       --> AACGACATCATCAAAAGGAGGATCACCAGGTCTTCAAAACTCTTGTTTCC

               1101   -   1151
UN09425        --> CTATCTTAACCTCATAAGCCTCTTCTTGGCTCAGCACAAACTCCCTTAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD982712       <-- ..................................................
EY904559       <-- ..................................................
FD961559       <-- ..................................................
FD532420       <-- CTATCTTAACCTCATAAGCCTCTTCTTGGCTCAGCACAAACTCCCTTAGC
FD535503       <-- CTATCTTAACCTCATAAGCCTCTTCTTGGCTCAGCACAAACTCCCTTAGC
EW733811       <-- CTATCTTAACCTCATAAGCCTCTTCTTGGCTCAGCACAAACTCCCTTAGC
EY908949       --> ..................................................
EV535929       --> ..................................................
EY899377       --> ..................................................
FD965967       --> ..................................................
FD986138       --> ..................................................
FD986458       --> ..................................................
FD954326       --> ..................................................
EY937870       --> ..................................................
EY925191       --> ..................................................
FD550047       --> ..................................................
EW738912       --> CTATCTTAACCTCATAAGCCTCTTCTTGGCTCAGCACAAACTCCCTTAGC
FD531148       --> CTATCTTAACCTCATAAGCCTCTTCTTGGCTCAACACAAACTCCCTT...

               1151   -   1201
UN09425        --> TCAGTTACTTCCTTGCCGTTTTGCAAATTGAACATCAACGTGGCTCCGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD982712       <-- ..................................................
EY904559       <-- ..................................................
FD961559       <-- ..................................................
FD532420       <-- TCAGTTACTTCCTTGCCGTTTTGCAAATTGAACATCAACGTG-CTCCGAT
FD535503       <-- TCAGTTACTTCCTTGCCGTTTTGCAAATTGAACATCAACGTG-CTCCGAT
EW733811       <-- TCAGTTACTTCCTTGCCGTTTTGCAAATTGAACATCAACGTGGCTC-GAT
EY908949       --> ..................................................
EV535929       --> ..................................................
EY899377       --> ..................................................
FD965967       --> ..................................................
FD986138       --> ..................................................
FD986458       --> ..................................................
FD954326       --> ..................................................
EY937870       --> ..................................................
EY925191       --> ..................................................
FD550047       --> ..................................................
EW738912       --> TCAGTTACTTCCTTGCCGTTTTGCAAATTGAACATCAACGTGGCTC-GAT
FD531148       --> ..................................................

               1201   -   1251
UN09425        --> CCACGGCCATGAATCTCACTCCTAACCCACCTGTTCTCAGAACCTTGGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD982712       <-- ..................................................
EY904559       <-- ..................................................
FD961559       <-- ..................................................
FD532420       <-- CCACGGCCATGAATCTCACTCCTAACCCACCTGTCCTCAGAACCTTGc..
FD535503       <-- CCACGGCCATGAATCTCACTCCTAACCCACCTGTCCTCAGAACCTTGGTC
EW733811       <-- CCACGGCCATGAATCTCACTCCTAACCCACCTGTTCTCAGAACCTTGGTC
EY908949       --> ..................................................
EV535929       --> ..................................................
EY899377       --> ..................................................
FD965967       --> ..................................................
FD986138       --> ..................................................
FD986458       --> ..................................................
FD954326       --> ..................................................
EY937870       --> ..................................................
EY925191       --> ..................................................
FD550047       --> ..................................................
EW738912       --> CCACGGCCATGAATCTCACTCCTAACCCACCTGTTCTCAGAACCTTGGTC
FD531148       --> ..................................................

               1251   -   1301
UN09425        --> CATTTCATAGCAATCTCCACCACCATATCCTTAGTACGGTTAACACCTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD982712       <-- ..................................................
EY904559       <-- ..................................................
FD961559       <-- ..................................................
FD532420       <-- ..................................................
FD535503       <-- CATTTCATAGCAGTCTCCACCACCATATCCTTAGTACGGTTAACGCCTAA
EW733811       <-- CATTTCATAGCAATCTCCACCACCATATCCTTAGTACGGTTAACACCTAA
EY908949       --> ..................................................
EV535929       --> ..................................................
EY899377       --> ..................................................
FD965967       --> ..................................................
FD986138       --> ..................................................
FD986458       --> ..................................................
FD954326       --> ..................................................
EY937870       --> ..................................................
EY925191       --> ..................................................
FD550047       --> ..................................................
EW738912       --> CATTTCATAGCAATCTCCACCACCATATCCTTAGTACGGTTAACACCTAA
FD531148       --> ..................................................

               1301   -   1351
UN09425        --> CCGGAGCTTGACGAAACCGACGACGGGTGCGAAAGTGCGTTTAGCCATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD982712       <-- ..................................................
EY904559       <-- ..................................................
FD961559       <-- ..................................................
FD532420       <-- ..................................................
FD535503       <-- CCGGAGCTTGACGAAACCGACGACGGGTGCGAAAGTGCGTTTAGCCATCT
EW733811       <-- CCGGAGCTTGACGAAACCGACGACGGGTGCGAAAGTGCGTTTAGCCATCT
EY908949       --> ..................................................
EV535929       --> ..................................................
EY899377       --> ..................................................
FD965967       --> ..................................................
FD986138       --> ..................................................
FD986458       --> ..................................................
FD954326       --> ..................................................
EY937870       --> ..................................................
EY925191       --> ..................................................
FD550047       --> ..................................................
EW738912       --> CCGGAGCTTGACGAAACCGACGACGGGTGCGAAAGTGCGTTTAGCCATCT
FD531148       --> ..................................................

               1351   -   1401
UN09425        --> CCTCTTGGATCTGATCGAATCCCATGTTGGAGAAATCGGGAGGAGGATCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD982712       <-- ..................................................
EY904559       <-- ..................................................
FD961559       <-- ..................................................
FD532420       <-- ..................................................
FD535503       <-- CCTCTTGGATCTGATCGAATCCCATGTTGGAGAAATCCGGAGGAGGATCG
EW733811       <-- CCTCTTGGATCTGATCGAATCCCATGTTGGAGAAATCGGGAGGAGGATCG
EY908949       --> ..................................................
EV535929       --> ..................................................
EY899377       --> ..................................................
FD965967       --> ..................................................
FD986138       --> ..................................................
FD986458       --> ..................................................
FD954326       --> ..................................................
EY937870       --> ..................................................
EY925191       --> ..................................................
FD550047       --> ..................................................
EW738912       --> CCTCTTGGATCTGATCGAATCCCATGTTGGAGAAATCGGGAGGAGGATCG
FD531148       --> ..................................................

               1401   -   1451
UN09425        --> AACTCCGGCATGGCTGCTTTGTTCCCCCAATGCTTCCATGATTCGTCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD982712       <-- ..................................................
EY904559       <-- ..................................................
FD961559       <-- ..................................................
FD532420       <-- ..................................................
FD535503       <-- AACTCCGGCGTGGCTGCTTTGTTCCCCCAATGCTTCCATGATTCGTCTTC
EW733811       <-- AACTCCGGCATGGCTGCTTTGTTCCCCCAATGCTTCCATGATTCGTCTTC
EY908949       --> ..................................................
EV535929       --> ..................................................
EY899377       --> ..................................................
FD965967       --> ..................................................
FD986138       --> ..................................................
FD986458       --> ..................................................
FD954326       --> ..................................................
EY937870       --> ..................................................
EY925191       --> ..................................................
FD550047       --> ..................................................
EW738912       --> AACTCCGGCATGGCTGCTTTGTTCCCCCAATGCTTCCATGATTCGTCTTC
FD531148       --> ..................................................

               1451   -   1501
UN09425        --> TTCGTTGTCTTCCACGTCGTCTAGATCGTCGGTGATCTCGATCCGTCGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD982712       <-- ..................................................
EY904559       <-- ..................................................
FD961559       <-- ..................................................
FD532420       <-- ..................................................
FD535503       <-- TTCGTTGTCTTCCACGTCGTCTAGATCGTCGGTGATCTCGATCCGTCGCT
EW733811       <-- TTCGTTGTCTTCCACGTCGTCTAGATCGTCGGTGATCTCGATCCGTCGCT
EY908949       --> ..................................................
EV535929       --> ..................................................
EY899377       --> ..................................................
FD965967       --> ..................................................
FD986138       --> ..................................................
FD986458       --> ..................................................
FD954326       --> ..................................................
EY937870       --> ..................................................
EY925191       --> ..................................................
FD550047       --> ..................................................
EW738912       --> TTCGTTGTCTTCCACGTCGTCTAGATCGTCGGTGATCTCGATCCGTCGCT
FD531148       --> ..................................................

               1501   -   1551
UN09425        --> TCCCCGCTTCCACGGATTCGTGGAAGTTCGAGATCAGGAGAAAGACGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD982712       <-- ..................................................
EY904559       <-- ..................................................
FD961559       <-- ..................................................
FD532420       <-- ..................................................
FD535503       <-- TCCCTGCTTCCACGGATTCGTGAAAGTTCGAGATCAGGAGAAAGACGATG
EW733811       <-- TCCCCGCTTCCACGGATTCGTGGAAGTTCGAGATCAGGAGAAAGACGATG
EY908949       --> ..................................................
EV535929       --> ..................................................
EY899377       --> ..................................................
FD965967       --> ..................................................
FD986138       --> ..................................................
FD986458       --> ..................................................
FD954326       --> ..................................................
EY937870       --> ..................................................
EY925191       --> ..................................................
FD550047       --> ..................................................
EW738912       --> TCCCCGCTTCCACGGATTCGTGGAAGTTC.....................
FD531148       --> ..................................................

               1551   -   1601
UN09425        --> ATGCAGCAAAGTAGAGAGGAAGGCGAGATCTTCTCCATGGTGGTTGTGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD982712       <-- ..................................................
EY904559       <-- ..................................................
FD961559       <-- ..................................................
FD532420       <-- ..................................................
FD535503       <-- ATGCAGCAAAGTAGAGAGGAAGGCGAGATCTTCTCCATGGTGGTTGTGTG
EW733811       <-- AT................................................
EY908949       --> ..................................................
EV535929       --> ..................................................
EY899377       --> ..................................................
FD965967       --> ..................................................
FD986138       --> ..................................................
FD986458       --> ..................................................
FD954326       --> ..................................................
EY937870       --> ..................................................
EY925191       --> ..................................................
FD550047       --> ..................................................
EW738912       --> ..................................................
FD531148       --> ..................................................

               1601   -   1651
UN09425        --> AATCTGTGATCACTTTTAGTTAGAGATCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD982712       <-- ..............................
EY904559       <-- ..............................
FD961559       <-- ..............................
FD532420       <-- ..............................
FD535503       <-- AATCTGTGATCACTTTTAGTTAGAGATCCC
EW733811       <-- ..............................
EY908949       --> ..............................
EV535929       --> ..............................
EY899377       --> ..............................
FD965967       --> ..............................
FD986138       --> ..............................
FD986458       --> ..............................
FD954326       --> ..............................
EY937870       --> ..............................
EY925191       --> ..............................
FD550047       --> ..............................
EW738912       --> ..............................
FD531148       --> ..............................