1      -     51
UN09427        --> GCTCCTCTCATTACTTTTGTCTGCACCGAAGCAAAAAGTTTCAGACTATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD937329       <-- GCTCCTCTCATTACTTTTGTCTGCACCGAAGCAAAAAGTTTCAGACTATC
EW720133       <-- ..ggCTCTCATTACTTTTGTCTGCACCGAAGCAAAAAGTTTCAGACTATC
EV540468       <-- ..................................................
FD941760       --> GCTCCTCTCATTACTTTTGTCTGCACCGAAGCAAAAAGTTTCAGACTATC
EW716187       --> ..ggCTCTCATTACTTTTGTCTGCACCGAAGCAAAAAGTTTCAGACTATC
FY441741       --> ..................................................
FY454274       --> ..................................................

               51     -    101
UN09427        --> CAAATCCAGGGTTTCTTCTCCTACAATCAGATCATCGAAACCCTACTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD937329       <-- CAAATCCAGGGTTTCTTCTCCTACAATCAGATCATCGAAACCCTACTTTT
EW720133       <-- CAAATCCAGGGTTTCTTCTCCTACAATCAGATCATCGAAACCCTACTTTT
EV540468       <-- ..................................................
FD941760       --> CAAATCCAGGGTTTCTTCTCCTACAATCAGATCATCGAAACCCTACTTTT
EW716187       --> CAAATCCAGGGTTTCTTCTCCTACAATCAGATCATCGAAACCCTACTTTT
FY441741       --> ...ATCCAGGGTTTCTTCTCCTACA-TCAGATCATCGAAACCCTACTTTT
FY454274       --> ..........................TCAGATCATCGAAACCCTACTTTT

               101    -    151
UN09427        --> CGAATCAGGTCTTAGCTTCTCCGTCGTTTGCCCCTCAGATCAACAAAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD937329       <-- CGAATCAGGTCTTAGCTTCTCCGTCGTTTGCCCCTCAGATCAACAAAGTT
EW720133       <-- CGAATCAGGTTTTAGCTTTTCCGTCGTTTGCCCCTCAGATCGACAAAGTT
EV540468       <-- ..................................................
FD941760       --> CGAATCAGGTCTTAGCTTCTCCGTCGTTTGCCCCTCAGATCAACAAAGTT
EW716187       --> CGAATCAGGTCTTAGCTTCTCCGTCGTTTGCCCCTCAGATCGACAAAGTT
FY441741       --> CGAATCAGGTCTTAGCTTCTCCGTCGTTTGCCCCTCAGATCAACAAAGTT
FY454274       --> CGAATCAGGTCTTAGCTTCTCCGTCGTTTGCCCCTCAGATCAACAAAGTT

               151    -    201
UN09427        --> TCATGTCTGAGCTTGATTCCCAGATCCCTACTGCCTTCGACCCGTTTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD937329       <-- TCATGTCTGAGCTTGATTCCCAGATCCCTACTGCCTTCGACCCGTTTGCT
EW720133       <-- TCATGTCTGAGCTTGATTCCCAGATCCCTACTGCCTTCGACCCGTTTGCT
EV540468       <-- ..................................................
FD941760       --> TCATGTCTGAGCTTGATTCCCAGATCCCTACTGCCTTCGACCCGTTTGCT
EW716187       --> TCATGTCTGAGCTTGATTCCCAGATCCCTACTGCCTTCGACCCGTTTGCT
FY441741       --> TCATGTCTGAACTTGATTCCCAGATCCCTACTGCCTTCGACCCGTTTGCT
FY454274       --> TCATGTCTGAACTTGATTCCCAGATCCCTACTGCCTTCGACCCGTTTGCT

               201    -    251
UN09427        --> GATGCGAATGTTGAGGACTCAGGTGCAGGAACAAAAGAGTACGTCCACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD937329       <-- GATGCGAATGTTGAGGACTCAGGTGCAGGAACAAAAGAGT-CGTCCACAT  Raphanus sativus var. oleiformis
EW720133       <-- GATGCGAATGTTGAGGACTCAGGTGCAGGAACAAAAGAGTACGTCCACAT  Raphanus sativus var. oleiformis
EV540468       <-- ......AATGTTGAGGACTCAGGTGCAGGAACAAAAGAGTACGTCCACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD941760       --> GATGCGAATGTTGAGGACTCAGGTGCAGGAACAAAAGAGT-CGTCCACAT  Raphanus sativus var. oleiformis
EW716187       --> GATGCGAATGTTGAGGACTCAGGTGCAGGAACAAAAGAGTACGTCCACAT  Raphanus sativus var. oleiformis
FY441741       --> GATGCGAATGTTGAGGACTCAGGTGCAGGAACAAAAGAGTACGTCCACAT  Raphanus sativus cv GSK3-1
FY454274       --> GATGCGAATGTTGAGGACTCAGGTGCAGGAACAAAAGAGTACGTCCACAT  Raphanus sativus cv GSK3-1

               251    -    301
UN09427        --> ACGTGTGCAGCAGCGGAATGGTAGGAAAAGCTTGACAACTGTCCAGGGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD937329       <-- ACGTGTGCAGCAGCGGAATGGTAGGAAAAGCTTGACAACTGTCCAGGGGT  Raphanus sativus var. oleiformis
EW720133       <-- ACGTGTGCAGCAGCGGAATGGTAGGAAAAGCTTGACAACTGTCCAGGGGT  Raphanus sativus var. oleiformis
EV540468       <-- CCGTGGGCAGCAGCGCAATGGTAGGAAAAGCTTGACAACTGTCCAGGGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD941760       --> ACGTGTGCAGCAGCGGAATGGTAGGAAAAGCTTGACAACTGTCCAGGGGT  Raphanus sativus var. oleiformis
EW716187       --> ACGTGTGCAGCAGCGGAATGGTAGGAAAAGCTTGACAACTGTCCAGGGGT  Raphanus sativus var. oleiformis
FY441741       --> CCGTGTGCAGCAGCGCAATGGTAGGAAAAGCTTGACAACTGTCCAGGGGT  Raphanus sativus cv GSK3-1
FY454274       --> CCGTGTGCAGCAGCGCAATGGTAGGAAAAGCTTGACAACTGTCCAGGGGT  Raphanus sativus cv GSK3-1

               301    -    351
UN09427        --> TGAAGAAAGAGTATAGTTACAGCAAGATACTTAAGGATCTCAAGAAAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD937329       <-- TGAAGAAAGAGTATAGTTACAGCAGGATACTTAAGGATCTCATGAAAGAG
EW720133       <-- TGAAGAAAGAGTATAGTTACAGCAAGATACTTAAGGATCTCAAGAAAGAG
EV540468       <-- TGAAGAAAGAGTATAGTTACAGCAAGATACTTAAGGATC-CAAGAAAGAG
FD941760       --> TGAAGAAAGAGTATAGTTACAGCAGGATACTTAAGGATCTCATGAAAGAG
EW716187       --> TGAAGAAAGAGTATAGTTACAGCAAGATACTTAAGGATCTCAAGAAAGAG
FY441741       --> TGAAGAAAGAGTATAGTTACAGCAAGATACTTAAGGACCTCAAGAAAGAG
FY454274       --> TGAAGAAAGAGTATAGTTACAGCAAGATACTTAAGGACCTCAAGAAAGAG

               351    -    401
UN09427        --> TTTTGTTGCAACGGAACAGTGGTTCAAGACTCTGAACTCGGACAGGTTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD937329       <-- TTTTGTTGCAACGGAACAGTGGTTCAAGACTCTGAACTCGGACAGGTTAT
EW720133       <-- TTTTGTTGCAACGGAACAGTGGTTCAAGACTCTGAACTCGGACAGGTTAT
EV540468       <-- TTTTGTTGCAACGGAACAGTGGTTCAAGA.....................
FD941760       --> TTTTGTTGCAACGGAACAGTGGTTCAAGACTCTGAACTCGGACAGGTTAT
EW716187       --> TTTTGTTGCAACGGAACAGTGGTTCAAGACTCTGAACTCGGACAGGTTAT
FY441741       --> TTTTGTTGCAACGGAACAGTCGTTCAAGACTCTGAACTCGGACAGGTTAT
FY454274       --> TTTTGTTGCAACGGAACAGTCGTTCAAGACTCTGAACTCGGACAGGTTAT

               401    -    451
UN09427        --> TCAGCTTCAAGGAGACCAGAGGAAGAACGTCTCCACGTTCCTAGTCCAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD937329       <-- TCAGCTTCAAGGAGACCAGAGGAAGAACGTCTCCACGTTCCTAGTCCAGG
EW720133       <-- TCAGCTTCAAGGAGACCAGAGGAAGAACGTCTCCACGTTCCTAGTCCAGG
EV540468       <-- ..................................................
FD941760       --> TCAGCTTCAAGGAGACCAGAGGAAGAACGTCTCCACGTTCCTAGTCCAGG
EW716187       --> TCAGCTTCAAGGAGACCAGAGGAAGAACGTCTCCACGTTCCTAGTCCAGG
FY441741       --> TCAGCTTCAAGGAGACCAGAGGAAGAACGTCTCCACGTTCCTAGTCCAGG
FY454274       --> TCAGCTTCAAGGAGACCAGAGGAAGAACGTCTCCACGTTCCTAGTCCAGG

               451    -    501
UN09427        --> CTGGGCTAGTGAAGAAGGACAACATCAAGATCCATGGTTTCTGAGCTGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD937329       <-- CTGGGCTAGTGAAGAAGGACAACATCAAGATCCATGGATTCTGAGCTGCA
EW720133       <-- CTGGGCTAGTGAAGAAGGACAACATCAAGATCCATGGTTTTTGAGCTGCA
EV540468       <-- ..................................................
FD941760       --> CTGGGCTAGTGAAGAAGGACAACATCAAGATCCATGGATTCTGAGCTGCA
EW716187       --> CTGGGCTAGTGAAGAAGGACAACATCAAGATCCATGGTTTCTGAGCTGCA
FY441741       --> CTGGGCTAGTGAAGAAGGACAACATCAAGATCCATGGTTTCTGAGCTGCA
FY454274       --> CTGGGCTAGTGAAGAAGGACAACATCAAGATCCATGGTTTCTGAGCTGCA

               501    -    551
UN09427        --> TTGTCCCTAAGTCTGTTTGCCTTATATTCTGTTATTAAGTGTGTATCACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD937329       <-- TTGTCCCTAAGTCTGTTTGCCTTATATTCTGTTATTAAGTGTGTATCACT
EW720133       <-- TTGTCCCTAAGTCTGTTTGCCTTATATTCTGTTATTAAGTGTGTATCACT
EV540468       <-- ..................................................
FD941760       --> TTGTCCCTAAGTCTGTTTGCCTTATATTCTGTTATTAAGTGTGTATCACT
EW716187       --> TTGTCCCTAAGTCTGTTTGCCTTATATTCTGTTATTAAGTGTGTATCACT
FY441741       --> TTGTCCCTAAGTCTGTTTGCCTTATATTCTGTTATTAAGTGTGTATTACT
FY454274       --> TTGTCCCTAAGTCTGTTTGCCTTATATTCTGTTATTAAGTGTGTATTACT

               551    -    601
UN09427        --> ATTGTTATCCTTCCCTTTCCAAAACATTTCCTCGAACTTCTTCTTTGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD937329       <-- ATTGTTATCCTTCCCTTTCCAAAACATTTCCTCGAACTTCTTCTTTGATC
EW720133       <-- ATTGTTATCCTTCCCTTTCCAAAACATTTCCTCGAACTTTTTCTTTGATC
EV540468       <-- ..................................................
FD941760       --> ATTGTTATCCTTCCCTTTCCAAAACATTTCCTCGAACTTCTTCTTTGATC
EW716187       --> ATTGTTATCCTTCCCTTTCCAAAACATTTCCTCGAACTTCTTCTTTGATC
FY441741       --> ATTGTTATCCTTCCCTTTCCAAAACATTTCCTCAAACTTCTTCTTTGATC
FY454274       --> ATTGTTATCCTTCCCTTTCCAAAACATTTCCTCAAACTTCTTCTTTGATC

               601    -    651
UN09427        --> TCTTGTTGCTTGGTTTGTTTCGATTTAGACTCGGTAAGAGACTATCTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD937329       <-- TCTTGTTGCTTGGTTTGTTTCGATTTAGACTCGGTAAGAGACTATCTTTT
EW720133       <-- TCTTGTTGCTTGGTTTGTTTCGATTTAGACTCGGTAAGAGACTATCTTTT
EV540468       <-- ..................................................
FD941760       --> TCTTGTTGCTTGGTTTGTTTCGATTTAGACTCGGTAAGAGACTATCTTTT
EW716187       --> TCTTGTTGCTTGGTTTGTTTCGATTTAGACTCGGTAAGAGACTATCTTTT
FY441741       --> TCTTGTTGCTTGGTTTGTTTCGATTTAGACTCGGTAAGAGACTATCTTTT
FY454274       --> TCTTGTTGCTTGGTTTGTTTCGATTTAGACTCGGTAAGAGACTATCTTTT

               651    -    701
UN09427        --> ATGTACTTGTTTGCTACTTG
                   ~~~~~~~~~~~~~~~~~~~~
FD937329       <-- ATGTACTTGTTTGCTACTTG
EW720133       <-- ATGTACTTGTTTGCTACTTG
EV540468       <-- ....................
FD941760       --> ATGTACTTGTTTGCTACTTG
EW716187       --> ATGTACTTGTTTGCTACTTG
FY441741       --> ATGTACTTGTTTGCTACTTG
FY454274       --> ATGTACTTGTTTGCTACTTG