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Alignment for radish unigene UN09454

               1      -     51
UN09454        --> GATATGCAAACTATATTTTTTATTGAATTATTTTACTTATGAGTACAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567702       <-- GATATGCAAACTATATTTTTTATTGAATTATTTTACTTATGAGTACAACA
EV567773       <-- GATATGCAAACTATATTTTTTATTGAATTATTTTACTTATGAGTACAACA
EV567680       <-- .....................ATTGAATTATTTTACTTATGAGTACAACA
EV567809       <-- .....................ATTGAATTATTTTACTTATGAGTACAACA
FY446597       <-- ..................................................
FD551854       <-- ..................................................
FY447500       <-- ..................................................
EY950201       <-- ..................................................
FD533367       <-- ..................................................
FD545382       --> .....GCAAACTATATTTTTTATTGAACTATTTTACTTATGAGTACAACA
EY893956       --> ...............................TTTACTTATGAGTACAACA
FD961359       --> ...............................TTTACTTATGAGTACAACA
FD547693       --> ..................................................

               51     -    101
UN09454        --> CATAAATATGACCTTGAGATAAATATGAGTTTTTGTTTTCTTGACAAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567702       <-- CATAAATATGACCTTGAGATAAATATGAGTTTTTGTTTTCTTGACAAGGA  Raphanus raphanistrum subsp. landra
EV567773       <-- CATAAATATGACCTTGAGATAAATATGAGTTTTTGTTTTCTTGACAAGGA  Raphanus raphanistrum subsp. landra
EV567680       <-- CATAAATATGACCTTGAGATAAATATGAGTTTTTGTTTTCTTGACAAGGA  Raphanus raphanistrum subsp. landra
EV567809       <-- CATAAATATGACCTTGAGATAAATATGAGTTTTTGTTTTCTTGACAAGGA  Raphanus raphanistrum subsp. landra
FY446597       <-- ..................................................  Raphanus sativus cv GSK3-1
FD551854       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY447500       <-- ..................................................  Raphanus sativus cv GSK3-1
EY950201       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD533367       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD545382       --> CATAAATATGACCTTGAGATAAATATGAGTTTTTGTTTTCTTGACAAGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY893956       --> CATAAATATGACCTTGAGATAAATATGAGTTTTTGTTTTCTTGACAAGGA  Raphanus raphanistrum subsp. maritimus
FD961359       --> CATAAATATGACCTTGAGATAAATATGAGTTTTTGTTTTCTTGACAAGGA  Raphanus raphanistrum subsp. maritimus
FD547693       --> ...............GAGATAAATATGAGTTTTTGTTTTCTTGACAAGGA  Raphanus raphanistrum subsp. raphanistrum (NY)

               101    -    151
UN09454        --> TGAGAATAATAGGTTATATATTGAATACGAATACAACAAGGTAATAAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567702       <-- TGAGAATAATAGGTTATATATTGAATACGAATACAACAAGGTAATAAATC  Raphanus raphanistrum subsp. landra
EV567773       <-- TGAGAATAATAGGTTATATATTGAATACGAATACAACAAGGTAATAAATC  Raphanus raphanistrum subsp. landra
EV567680       <-- TGAGAATAATAGGTTATATATTGAATACGAATACAACAAGGTAATAAATC  Raphanus raphanistrum subsp. landra
EV567809       <-- TGAGAATAATAGGTTATATATTGAATACGAATACAACAAGGTAATAAATC  Raphanus raphanistrum subsp. landra
FY446597       <-- ..................................................  Raphanus sativus cv GSK3-1
FD551854       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY447500       <-- ..................................................  Raphanus sativus cv GSK3-1
EY950201       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD533367       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD545382       --> AGAGAATAATAGGTTATATATTGAATACGAATACAACAAGGTAATAAATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY893956       --> AGAAAATAATAGGTTATATATTGAATACGAATACGACAAGGTAATAAATC  Raphanus raphanistrum subsp. maritimus
FD961359       --> AAAAAATAATAGGTTATATATTGAATACGAATACAACAAGGTAATAAATC  Raphanus raphanistrum subsp. maritimus
FD547693       --> AGAGAATAATAGGTTATATATTAAATACGAATACAACAAGGTAATAAATC  Raphanus raphanistrum subsp. raphanistrum (NY)

               151    -    201
UN09454        --> CATAAGTGCTCCAATATAACAAGAGCCAAATAGATAATTTGGGAGTGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567702       <-- CATAAGTGCTCCAATATAACAAGAGCCAAATAGATAATTTGGGAGTGAAA
EV567773       <-- CATAAGTGCTCCAATATAACAAGAGCCAAATAGATAATTTGGGAGTGAAA
EV567680       <-- CATAAGTGCTCCAATATAACAAGAGCCAAATAGATAATTTGGGAGTGAAA
EV567809       <-- CATAAGTGCTCCAATATAACAAGAGCCAAATAGATAATTTGGGAGTGAAA
FY446597       <-- ..................................................
FD551854       <-- ..................................................
FY447500       <-- ..................................................
EY950201       <-- ..................................................
FD533367       <-- ..................................................
FD545382       --> CATAAGTGCTCCAATATAACAAGAGCCAAATAGATAATTTGGGAGTGAAA
EY893956       --> CATAAGTGCTCCAATATAACAAGAGCCAAATAGATAATTTGGGAGTGAAA
FD961359       --> CATAAGTGCTCCAATATAACAAGAGCCAAATAAATAATTTGGGAGTGAAA
FD547693       --> CATAAGTGCTCCAATATAACAAGAGCCAAATAGATAATTTGGGAGTGAAA

               201    -    251
UN09454        --> CTAATTAATTAGCTGGAACTCTGCCTTTGAGGAAATTCTTGCAAATCGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567702       <-- CTAATTAATTAGCTGGAACTCTGCCTTTGAGGAAATTCTTGCAAATCGTC
EV567773       <-- CTAATTAATTAGCTGGAACTCTGCCTTTGAGGAAATTCTTGCAAATCGTC
EV567680       <-- CTAATTAATTAGCTGGAACTCTGCCTTTGAGGAAATTCTTGCAAATCGTC
EV567809       <-- CTAATTAATTAGCTGGAACTCTGCCTTTGAGGAAATTCTTGCAAATCGTC
FY446597       <-- ..................................................
FD551854       <-- ..................................................
FY447500       <-- ..................................................
EY950201       <-- ..................................................
FD533367       <-- ..................................................
FD545382       --> CTAATTAATTAGCTGGAACTCTGCCTTTGAGGAAATTCTTGCAAATCGTC
EY893956       --> CTAATTAATTAGCTGGAACTCTGCCTTTGAGGAAATTCTTGCAAATCGTC
FD961359       --> CTAATTAATTAGCTAGAACTCTGCCCTTGAGGAAATTCTTGCAAATCGTC
FD547693       --> CTAATTAATTAGCTGGAACTCTGCCTTTGAGGAAATTCTTGCAAATCGTC

               251    -    301
UN09454        --> TCCAAAAGTTTCCTGTCCGCTCCCCTATTCTCCATCGAGGCCTTTGCCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567702       <-- TCCAAAAGTTTCCTGTCCGCTCCCCTATTCTCCATCGAGGCCTTTGCCGC
EV567773       <-- TCCAAAAGTTTCCTGTCCGCTCCCCTATTCTCCATCGAGGCCTTTGCCGC
EV567680       <-- TCCAAAAGTTTCCTGTCCGCTCCCCTATTCTCCATCGAGGCCTTTGCCGC
EV567809       <-- TCCAAAAGTTTCCTGTCCGCTCCCCTATTCTCCATCGAGGCCTTTGCCGC
FY446597       <-- ..................................................
FD551854       <-- ..................................................
FY447500       <-- ..................................................
EY950201       <-- ..................................................
FD533367       <-- ..................................................
FD545382       --> TCCAAAAGTTTCCTGTCCGCTCCCCTATTCTCCATCGAGGCCTTTGCCGC
EY893956       --> TCCAAAAGTTTCCTGTCCGCTCCCCTATTCTCCATCGAGGCCTTTGCCGC
FD961359       --> TCCAAAAGTTTCCTGTCCGCTCCCCTATTCTCCATCGAGGCCTTTGCCGC
FD547693       --> TCCAAAAGTTTCCTGTCCGCTCCCCTATTCTCCATCGAGGCCTTTGCCGC

               301    -    351
UN09454        --> ATCCGCAAAATCTTGCTTGATGAAGCCAAGACCAAGAACACGATCAACGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567702       <-- ATCCGCAAAATCTTGCTTGATGAAGCCAAGACCAAGAACACGATCAACGA
EV567773       <-- ATCCGCAAAATCTTGCTTGATGAAGCCAAGACCAAGAACACGATCAACGA
EV567680       <-- ATCCGCAAAATCTTGCTTGATGAAGCCAAGACCAAGAACACGATCAACGA
EV567809       <-- ATCCGCAAAATCTTGCTTGATGAAGCCAAGACCAAGAACACGATCAACGA
FY446597       <-- ..................................................
FD551854       <-- ..................................................
FY447500       <-- ..................................................
EY950201       <-- ..................................................
FD533367       <-- ..................................................
FD545382       --> ATCCGCAAAATCTTGCTTGATGAAGCCAAGACCAGGAACACGATCAACGA
EY893956       --> ATCCGCAAAATCTTGCTTGATGAAGCCAAGACCAAGAACACGATCAACGA
FD961359       --> ATCCGCAAAATCTTGCTTGATGAAGCCAAGACCAAGAACACGATCAACGA
FD547693       --> ATCCGCAAAATCTTGCTTGATGAAGCCAAGACCAAGAACACGATCAACGA

               351    -    401
UN09454        --> TCTCGTGGAGAATCTCTCTGTTATACTCAGGATGTCCTTGGATACAGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567702       <-- TCTCGTGGAGAATCTCTCTGTTATACTCAGGATGTCCTTGGATACAGAAT
EV567773       <-- TCTCGTGGAGAATCTCTCTGTTATACTCAGGATGTCCTTGGATACAGAAT
EV567680       <-- TCTCGTGGAGAATCTCTCTGTTATACTCAGGATGTCCTTGGATACAGAAT
EV567809       <-- TCTCGTGGAGAATCTCTCTGTTATACTCAGGATGTCCTTGGATACAGAAT
FY446597       <-- ..................................................
FD551854       <-- ..................................................
FY447500       <-- ..................................................
EY950201       <-- ..................................................
FD533367       <-- ..................................................
FD545382       --> TCTCGTGGAGAATCTCTCTGTTATACTCAGGATGTCCTTGGATACAGAAT
EY893956       --> TCTCGTGGAGAATCTCTCTGTTATACTCAGGATGTCCTTGGATACAGAAT
FD961359       --> TCTCGTGGAAAATCTCTCTGTTATACTCAGGATGTCCTTGGATACAGAAT
FD547693       --> TCTCGTGGAGAATCTCTCTGTTATACTCAGGATGTCCTTGGATACAGAAT

               401    -    451
UN09454        --> AAATGATCCTCAATGGAGAACATCTCCACCTCGTAATTTTCGGAATAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567702       <-- AAATGATCCTCAATGGAGAACATCTCCACCTCGTAATTTTCGGAATAAGC
EV567773       <-- AAATGATCCTCAATGGAGAACATCTCCACCTCGTAATTTTCGGAATAAGC
EV567680       <-- AAATGATCCTCAATGGAGAACATCTCCACCTCGTAATTTTCGGAATAAGC
EV567809       <-- AAATGATCCTCAATGGAGAACATCTCCACCTCGTAATTTTCGGAATAAGC
FY446597       <-- .................................TAATTTTCGGAATAAGC
FD551854       <-- ..................................................
FY447500       <-- ..................................................
EY950201       <-- ..................................................
FD533367       <-- ..................................................
FD545382       --> AAATGATCCTCAATGGAGAACATCTCCACCTCGTAATTTTCGGAATAAGC
EY893956       --> AAATGATCCTCAATGGAGAACATCTCCACCTCGTAATTTTCGGAATAAGC
FD961359       --> AAATGATCCTCAATGGAGAACATCTCCACCTCGTAATTTTCGGAATAAGC
FD547693       --> AAATGATCCTCAATGGAGAACATCTCCACCTCGTAATTTTCGGAATAAGC

               451    -    501
UN09454        --> TAGTACTTTAGCAGACTCAGGCAACACTAACACTT-CGTCCTGATGTAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567702       <-- TAGTACTTTAGCAGACTCAGGCAACACTAACACTT-CGTCCTGATGTAAT
EV567773       <-- TAGTACTTTAGCAGACTCAGGCAACACTAACACTT-CGTCCTGATGTAAT
EV567680       <-- TAGTACTTTAGCAGACTCAGGCAACACTAACACTT-CGTCCTGATGTAAT
EV567809       <-- TAGTACTTTAGCAGACTCAGGCAACACTAACACTT-CGTCCTGATGTAAT
FY446597       <-- TAGTACTTTAGCAGACTCAGGCAACACTA-CACTTTCGTCCTGATGTAAT
FD551854       <-- .................................................a
FY447500       <-- ..................................................
EY950201       <-- ..................................................
FD533367       <-- ..................................................
FD545382       --> TAGTACTTTAGCAGACTCAGGCAACACTAACACTT-CGTCCTGATGTAAT
EY893956       --> TAGTACTTTAGCAGACTCAGGCAACACTAACACTT-CGTCCTGATGTAAT
FD961359       --> TAGTACTTT.........................................
FD547693       --> TAGTACTTTAGCAGACTCAGGCAACACTAACACTT-CGTCCTGATGTAAT

               501    -    551
UN09454        --> TTTAGGATGGCTATGGTATCCGGAATCTCGTTTCCAAAGAAACTTCCCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567702       <-- TTTAGGATGGCTATGGTATCCGGAATCTCGTTTCCAAAGAAACTTCCCGG
EV567773       <-- TTTAGGATGGCTATGGTATCCGGAATCTCGTTTCCAAAGAAACTTCCCGG
EV567680       <-- TTTAGGATGGCTATGGTATCCGGAATCTCGTTTCCAAAGAAACTTCCCGG
EV567809       <-- TTTAGGATGGCTATGGTATCCGGAATCTCGTTTCCAAAGAAACTTCCCGG
FY446597       <-- TTTAGGATGGCTATGGTATCCGGAATCTCGTTTCCAAAGAAACTTCCCGG
FD551854       <-- TTTAGGATGGCTATGGTATCCGGAATCTCGTTTCCAAAGAAACTTCCCGG
FY447500       <-- ..................................................
EY950201       <-- ..................................................
FD533367       <-- ..................................................
FD545382       --> TTTAGGATGGCTATGGTATCCGGAATCTCGTTTCCAAAGAAACTTCCCGG
EY893956       --> TTTAGGATGGCTATGGTATCCGGAATCTCGTTTCCAAAGAAACTTCCCGG
FD961359       --> ..................................................
FD547693       --> TTTAGGATGGCTATGGTATCCGGAATCTCGTTTCCAAAGAAACTTCCCGG

               551    -    601
UN09454        --> TTTAATTGCATCCTTCACGAGGGTTATGTCTGTAAGCTTAAGTTCTGGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567702       <-- TTTAATTGCATCCTTCACGAGGGTTATGTCTGTAAGC.............
EV567773       <-- TTTAATTGCATCCTTCACGAGGGTTATGTCTGTAAGC.............
EV567680       <-- TTTAATTGCATCCTTCACGAGGGTTATGTCTGTAAGC.............
EV567809       <-- TTTAATTGCATCCTTCACGAGGGTTATGTCTGTAAGC.............
FY446597       <-- TTTAATTGCATCCTTCACGAGGGTTATGTCTGTAAGCTTAAGTTCTGGTC
FD551854       <-- TTTAATTGCATCCCTCACGAGGGTTATGTCTGTAAGCTTAAGTTCTGGTC
FY447500       <-- ..................GAGGGTTATGTCTGTAAGCTTAAGTTCTGGTC
EY950201       <-- ..................................................
FD533367       <-- ..................................................
FD545382       --> TTTAATTGCATCCTTCACGAGGGTTATGTCTGTAAGCTTAAGTTCTGGTC
EY893956       --> TTTAATTGCATCCTTCACGAGGGTTATGTC....................
FD961359       --> ..................................................
FD547693       --> TTTAATTGCATCCTTCACGAGGGTTATGTCTGTAAGCTTAAGTTCTGGTC

               601    -    651
UN09454        --> CCTTCCTTGCTCTTCCCACTGTTCCTCCTCTTACTCTAGCTATTATCTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567702       <-- ..................................................
EV567773       <-- ..................................................
EV567680       <-- ..................................................
EV567809       <-- ..................................................
FY446597       <-- CCTCCCTTGCTCTTCCCACTGTTCCTCCTCTTACTCTAGCTATTATCTAA
FD551854       <-- CCTTCCTTGCTCTTCCCACTGTTCCTCCTCTTACTCTAGCTATTATCTAA
FY447500       <-- CCTTCCTTGCTCTTCCCACTGTTCCTCCTCTTACTCTAGCTATTATCTAA
EY950201       <-- ..................................................
FD533367       <-- ..................................................
FD545382       --> CCTTCCTTGCTCTTCCCACTGTTCCTCCTCTTACTCTAGCTATTATCTgg
EY893956       --> ..................................................
FD961359       --> ..................................................
FD547693       --> CCTTCCTTGCTCTTCCCACTGTTCCTCCTCTTACTCTAGCTATTATCTAA

               651    -    701
UN09454        --> AGGAATACAATTTTTTTTGATAAATTAAAGGTAACTTTTAATCTTAATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567702       <-- ..................................................
EV567773       <-- ..................................................
EV567680       <-- ..................................................
EV567809       <-- ..................................................
FY446597       <-- AGGAATACAATTTTTTTTGATAAATTAAAGGTAACTTTTAATCTTAATCC
FD551854       <-- AGGAATACAATTTTTTT-GATAAATTAAAGGTAACTTTTAATCTTAATCC
FY447500       <-- AGGAATACAATTTTTTTTGATAAATTAAAGGTAACTTTTAATCTTAATCC
EY950201       <-- ..................................................
FD533367       <-- ..................................................
FD545382       --> tggccaaa..........................................
EY893956       --> ..................................................
FD961359       --> ..................................................
FD547693       --> AGGAATACAATTTTTTT-GATAAATTAAAGGTAACTTTTAATCTTAATCC

               701    -    751
UN09454        --> AAATCATTATACTTAATGGAAAGTGTTAGTAGAATTGTATAGTTAATATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567702       <-- ..................................................
EV567773       <-- ..................................................
EV567680       <-- ..................................................
EV567809       <-- ..................................................
FY446597       <-- AAATCATTATACTTAATGGAAAGTGTTAGTAGAATTGTATAGTTAATATG
FD551854       <-- AAAT-ATTATACTTAATGGAAAGTGTTAGTAGAATTGTATAGTTAATATG
FY447500       <-- AAATCATTATACTTAATGGAAAGTGTTAGTAGAATTGTATAGTTAATATG
EY950201       <-- ..................................................
FD533367       <-- ..................................................
FD545382       --> ..................................................
EY893956       --> ..................................................
FD961359       --> ..................................................
FD547693       --> AAAT-ATTATACTTAATGGAAAGTGTTAGTAGAATTGTATAGTTAATATG

               751    -    801
UN09454        --> ATAATATTTTAGTACTTATATGGTCTCTAGGGTTGGGTTTAAGACCATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567702       <-- ..................................................
EV567773       <-- ..................................................
EV567680       <-- ..................................................
EV567809       <-- ..................................................
FY446597       <-- ATAATATTTTAGTACTTATATGGTCTCTAGGGTTGGGTTTAAGACCATAT
FD551854       <-- ATAATATTTTAGTAATTATATGGTCTCCAGGGTTGGGTTTAAGACCATAT
FY447500       <-- ATAATATTTTAGTACTTATATGGTCTCTAGGGTTGGGTTTAAGACCATAT
EY950201       <-- ..................................................
FD533367       <-- ..................................................
FD545382       --> ..................................................
EY893956       --> ..................................................
FD961359       --> ..................................................
FD547693       --> ATAATATTTTAGTAATTATATGGTCTCCAGGGTTGGGTTTAAG.......

               801    -    851
UN09454        --> TGTAAGGTTAGATTGGTAAGAAGAGAGAACCTGGTGGCCAAAGCAGATGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567702       <-- ..................................................
EV567773       <-- ..................................................
EV567680       <-- ..................................................
EV567809       <-- ..................................................
FY446597       <-- TGTAAGGTTAGATTGGTAAGAAGAGAGAACCTGGTGGCCAAAGCAGATGC
FD551854       <-- TGTAAGGTTAGATTAGTAAGAAGAGAGAACCTGGTGGCCAAAGCAGATGC
FY447500       <-- TGTAAGGTTAGATTGGTAAGAAGAGAGAACCTGGTGGCCAAAGCAGATGC
EY950201       <-- ..............gcatccgcaaatcttgCTGGTG-CCAAAGCAGATGC
FD533367       <-- ..................................................
FD545382       --> ..................................................
EY893956       --> ..................................................
FD961359       --> ..................................................
FD547693       --> ..................................................

               851    -    901
UN09454        --> CAAGAATTTTCTTCTTCATCTCATCAAGTTTCTTGACGATCTCACATAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567702       <-- ..................................................
EV567773       <-- ..................................................
EV567680       <-- ..................................................
EV567809       <-- ..................................................
FY446597       <-- CAAGAATTTTCTTCTTCATCTCATCAAGTTTCTTGACGATCTCACATAGC
FD551854       <-- CAAGAATTTTCTTCTTCATCTCATCAAGTTTCTTGACGATCTCACATAGC
FY447500       <-- CAAGAATTTTCTTCTTCATCTCATCAAGTTTCTTGACGATCTCACATAGC
EY950201       <-- CAAGAATTT-CTTCTTCATCTCATCAAGTTTCTTGACGATCTCACATAGC
FD533367       <-- .......................TCAAGTCTCT-GACGATCTCACATAGC
FD545382       --> ..................................................
EY893956       --> ..................................................
FD961359       --> ..................................................
FD547693       --> ..................................................

               901    -    951
UN09454        --> TTAAGGATCCAAGGATCATTCTCGAAGGAATCGTGAGAGCTTCCACTAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567702       <-- ..................................................
EV567773       <-- ..................................................
EV567680       <-- ..................................................
EV567809       <-- ..................................................
FY446597       <-- TTAAGGATCCAAGGATCATTCTCGAAGGAATCGTGAGAGCTTCCACTAAT
FD551854       <-- TTAAGGATCCAAGGATCATTCTCGAAGGAATCGTGAGAGCTTCCACTAAT
FY447500       <-- TTAAGGATCCAAGGATCATTCTCGAAGGAATCGTGAGAGCTTCCACTAAT
EY950201       <-- TTAAGGATCCAAGGATCATTCTCGAAGGAATCGTGAGAGCTTCCACTAAT
FD533367       <-- TTAAGGATCCAAGGATCATTCTCGAAG-AATCGTGAGAGCTTCCACTAA-
FD545382       --> ..................................................
EY893956       --> ..................................................
FD961359       --> ..................................................
FD547693       --> ..................................................

               951    -   1001
UN09454        --> AACGAAACCGTCGTACTTTTCAAGATCTTTCTCGTCCGGAAACTCGCCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567702       <-- ..................................................
EV567773       <-- ..................................................
EV567680       <-- ..................................................
EV567809       <-- ..................................................
FY446597       <-- AACGAAACCGTCGTACTTTTCAAGATCTTTCTCGTCCGGAAACTCGCCCT
FD551854       <-- AACGAAACCGTCGTACTTTTCAAGATCTTTCTCGTCCGGAAACTCGCCCT
FY447500       <-- AACGAAACCGTCGTACTTTTCAAGATCTTTCTCGTCCGGAAACTCGCCCT
EY950201       <-- AACGAAACCGTCGTACTTTTCAAGATCTTTCTCGTCCGGAAACTCGCCCT
FD533367       <-- AACGAA-CCGTCGTACTTTTCAAGATCTTTCTCGTCCGGAAACTCGCCCT
FD545382       --> ..................................................
EY893956       --> ..................................................
FD961359       --> ..................................................
FD547693       --> ..................................................

               1001   -   1051
UN09454        --> CTACGACTCTAAATGAGTCCCAATGCTCTCCTTCGTCACCGAACGTGGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567702       <-- ..................................................
EV567773       <-- ..................................................
EV567680       <-- ..................................................
EV567809       <-- ..................................................
FY446597       <-- CTACGACTCTAAATGAGTCCCAATGCTCTCCTTCGTCACCGAACGTGGAC
FD551854       <-- CTACGACTCTAAATGAGTCCCAATGCTCTCCTTCGTCACCGAACGTGGAC
FY447500       <-- CTACGACTCTAAATGAGTCCCAATGCTTTCCTTCGTCACCGAACGTGGAC
EY950201       <-- CTACGACTCTAAATGAGTCCCAATGCTCTCCTTCGTCACCGAACGTGGAC
FD533367       <-- CTACGACTCTAAATGAGTCCCAATGCTCTCCTTCGTCACCGAACGTGGAC
FD545382       --> ..................................................
EY893956       --> ..................................................
FD961359       --> ..................................................
FD547693       --> ..................................................

               1051   -   1101
UN09454        --> ACGAACACGTTGTGGTATCCTCCGTACTCTTTCTTCACGAACTCTGAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567702       <-- ..................................................
EV567773       <-- ..................................................
EV567680       <-- ..................................................
EV567809       <-- ..................................................
FY446597       <-- ACGAACACGTTGTGGTATCCTCCGTACTCTTTCTTCACGAACTCTGAATC
FD551854       <-- ACGAACACGTTGTGGTATCCTCCGTACTCTTTCTTCACGAACTCTGAATC
FY447500       <-- ACGAACACGTTGTGGTATCCTCCGTACTCTTTCTTCACGAACTCTGAATC
EY950201       <-- ACGAACACGTTGTGGTATCCTCCGTACTCTTTCTTCACGAACTCTGAATC
FD533367       <-- ACGAACACGTTGTGGTATCCTCCGTACTCTTTCTTCACGAACTCTGAATC
FD545382       --> ..................................................
EY893956       --> ..................................................
FD961359       --> ..................................................
FD547693       --> ..................................................

               1101   -   1151
UN09454        --> AGGAGTGGCTAGAAACAGTGCGAACTTTTTCTGCTCAACCATTTTTTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567702       <-- ..................................................
EV567773       <-- ..................................................
EV567680       <-- ..................................................
EV567809       <-- ..................................................
FY446597       <-- AGGAGTGGCTAGAAACAGTGCGAACTTTTTCTGCTCAACCATTTTTTTCC
FD551854       <-- AGGAGTGGCTAGAAACAGTGCGAACTTTTTCTGCTCAACCATTTTTTTCC
FY447500       <-- AGGAGTGGCTAGAAACAGTGCGAACTTTTTCTGCTCAACCATTTTTT-CC
EY950201       <-- AGGAGTGGCTAGAAACAGTGCGAACTTTTTCTGCTCAACCATTTTTTTCC
FD533367       <-- AGGAGTGGCTAGAAACAGTGCGAACTTTTTCTGCTCAACCATTTTTT-CC
FD545382       --> ..................................................
EY893956       --> ..................................................
FD961359       --> ..................................................
FD547693       --> ..................................................

               1151   -   1201
UN09454        --> CGTCTAAAGAAAATAGAGAGACAGTGTGGTTGATTAGAAGAAATAGAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV567702       <-- ..................................................
EV567773       <-- ..................................................
EV567680       <-- ..................................................
EV567809       <-- ..................................................
FY446597       <-- CGTCTAA...........................................
FD551854       <-- CGTCTAAAGAAAATAGAGAGACAGTGTGGTTGATTAGAAGAAATAGAGAT
FY447500       <-- CGTCTAAAGAAAATAGAGAGACAGTGTGGT-GATTAGAAGA.........
EY950201       <-- CGTCTAAAGAAAATAGAGAGACAGTGTGGTTGATTAGAAGAAATAGAGAT
FD533367       <-- CGTCTAAAGAAAATAGAGAGACAGTGTGGTTGATTAGAAGAAATAGAGAT
FD545382       --> ..................................................
EY893956       --> ..................................................
FD961359       --> ..................................................
FD547693       --> ..................................................

               1201   -   1251
UN09454        --> AATAAAGAGAGCAATCC
                   ~~~~~~~~~~~~~~~~~
EV567702       <-- .................
EV567773       <-- .................
EV567680       <-- .................
EV567809       <-- .................
FY446597       <-- .................
FD551854       <-- AATAAAGAGAGCAATCC
FY447500       <-- .................
EY950201       <-- AATAAAGAGAGCAATCC
FD533367       <-- AATAAAGAGAGCAATCC
FD545382       --> .................
EY893956       --> .................
FD961359       --> .................
FD547693       --> .................