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Alignment for radish unigene UN09460

               1      -     51
UN09460        --> GGGTTTTACACAATAATTCTGATCTACTTACTCTGTTTTAAGCTGCCCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545116       <-- ..................................................
FD544709       <-- ..................................................
FD937144       <-- ..................................................
FD538661       <-- ..................................................
FD950901       <-- ..................................................
FD566469       <-- ..................................................
EY935572       <-- ..................................................
FD574666       <-- ..................................................
EY909890       <-- ..................................................
EY894011       <-- ..................................................
EY897799       --> GGGTTTTACACAATAATTCTGATCTACTTACTCTGTTTTAAGCTGCCCAT
EY939681       --> ..........................................ggGCCCGT
FD954697       --> ..........................................ggGCCCAT
FD542649       --> ..................................................
EY913698       --> ..................................................
FD570708       --> ..................................................
FD941523       --> ..................................................
EV549697       --> ..................................................
FD548532       --> ..................................................
FD562604       --> ..................................................
EY925308       --> ..................................................

               51     -    101
UN09460        --> CAAATGTCTTCTTCTCCACCGTTTAAACCCTAATCTTTTTAACAAG-ATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545116       <-- ..................................................
FD544709       <-- ..................................................
FD937144       <-- ..................................................
FD538661       <-- ..................................................
FD950901       <-- ..................................................
FD566469       <-- ..................................................
EY935572       <-- ..................................................
FD574666       <-- ..................................................
EY909890       <-- ..................................................
EY894011       <-- ..................................................
EY897799       --> CAAATGTCTTCTTCTCCACCGTTTAAACCCTAATCTTTTTAACAAG-ATC
EY939681       --> CAAATGTCTTCTTCTCCACCGTTTAAACCCTAATCTTTTTAACAAG-ATC
FD954697       --> CAAATGTCTTCTTCTCCACCGTTTAA-CCCTAATCTTTTTAACAAG-ATC
FD542649       --> ..................ggGTTTTAACCCTAATCTTTT-AACAAG-GTC
EY913698       --> ...................................TTTTTAACAAG-ATC
FD570708       --> ...................................TTTTTAACAAG-ATC
FD941523       --> ...................................TTTTTAACAAG-ATC
EV549697       --> ........................................AACAAGTATC
FD548532       --> ..................................................
FD562604       --> ..................................................
EY925308       --> ..................................................

               101    -    151
UN09460        --> AGGATAACAAAAG--G-GATGCATAGTCTTCTTCACCTTCTTCTCATCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545116       <-- ..................................................
FD544709       <-- ..................................................
FD937144       <-- ..................................................
FD538661       <-- ..................................................
FD950901       <-- ..................................................
FD566469       <-- ..................................................
EY935572       <-- ..................................................
FD574666       <-- ..................................................
EY909890       <-- ..................................................
EY894011       <-- ..................................................
EY897799       --> AGGATAACAAAAG--G-GATGCATAGTCTTCTTCACCTTCTTCTCATCGC
EY939681       --> AGGATAACAAAAG--G-GATGCATAGTCTTCTTCACCTTCTTCTCATCGC
FD954697       --> AGGATAACAAAAG--G-GATGCATAGTCTTCTTCACCTTCTTCTCATCGC
FD542649       --> CGGATAACAAAAGAAGCGATGCATAGTGTTTTTCACCTTCTTCTCATCGC
EY913698       --> AGGATAACAAAAG--G-GATGCATAGTCTTCTTCACCTTCTTCTCATCGC
FD570708       --> AGGATAACAAAAG--G-GATGCATAGTCTTCTTCACCTTCTTCTCATCGC
FD941523       --> AGGATAACAAAAG--G-GATGCATAGTCTTCTTCACCTTCTTCTCATCGC
EV549697       --> AGGATAACAAAAG--G-GATGCATAGTCTTCTTCACCTTCTTCTCATCGC
FD548532       --> ..................................................
FD562604       --> ..................................................
EY925308       --> ..................................................

               151    -    201
UN09460        --> CACCGTTACGATCTCGATCCCTGTTGTTTTCGCCGAGAATGATTCGATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545116       <-- ..................................................
FD544709       <-- ..................................................
FD937144       <-- ..................................................
FD538661       <-- ..................................................
FD950901       <-- ..................................................
FD566469       <-- ..................................................
EY935572       <-- ..................................................
FD574666       <-- ..................................................
EY909890       <-- ..................................................
EY894011       <-- ..................................................
EY897799       --> CACCGTTACGATCTCGATCCCTGTTGTTTTCGCCGAGAATGATTCGATAT
EY939681       --> CACCGTCACGATCTCGATCCCTGTTGTTTTCGCCGAGAATGATTCGATAT
FD954697       --> CACCGTTACGATCTCGATCCCTGTTGTTTTCGCCGAGAATGATTCGATAT
FD542649       --> CACCGTTACGATCTCGATCCCTGTTGTTTTCTCCGAGAATGATTCGATAT
EY913698       --> CACCGTTACGATCTCGATCCCTGTTGTTTTCGCCGAGAATGATTCGATAT
FD570708       --> CACCGTCACGATCTCGATCCCTGTTGTTTTCGCCGAGAATGATTCGATAT
FD941523       --> CACCGTTACGATCTCGATCCCTGTTGTTTTCGCCGAGAATGATTCGATAT
EV549697       --> CACCGTTACGATCTCGATCCCTGTTGTTTTCGCCGAGAATGATTCCATAT
FD548532       --> gACCGTTACGATCTCGATCCCTGTTGTTTTCGCCGAGAATGATTCCATAT
FD562604       --> ..................................................
EY925308       --> ..................................................

               201    -    251
UN09460        --> ACGACGTCCTTCGAGCACACGCCTTACCGATGGGGCTATTACCAAAGGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545116       <-- ...........................CGATGGGGCTATTACCAAAGGGC
FD544709       <-- ..............................atGGGCTAT-ACCAAAGGGC
FD937144       <-- ..................................................
FD538661       <-- ..................................................
FD950901       <-- ..................................................
FD566469       <-- ..................................................
EY935572       <-- ..................................................
FD574666       <-- ..................................................
EY909890       <-- ..................................................
EY894011       <-- ..................................................
EY897799       --> ACGACGTCCTTCGAGCACACGCCCTACCGATGGGGCTATTACCAAAGGGC
EY939681       --> ACGACGTCCTTCGAGCACACGCCTTACCTATGGGGCTATTACCAAAGGGC
FD954697       --> ACGACGTCCTTCGAGCACACGCCTTACCGATGGGGCTATTACCAAAGGGA
FD542649       --> ACGACGTCCTTCGAGCACACGCCTTACCGATGGGGCTATTACCAAAGGGA
EY913698       --> ACGACGTCCTTCGAGCACACGCCTTACCGATGGGGCTATTACCAAAGGGC
FD570708       --> ACGACGTCCTTCGAGCACACGCCTTACCTATGGGGCTATTACCAAAGGGC
FD941523       --> ACGACGTCCTTCGAGCACACGCCTTACCGATGGGGCTATTACCAAAGGGC
EV549697       --> ACGACGTCCTTCGAGCACACGCCTTACCGATGGGGCTATTACCAAAGGGC
FD548532       --> ACGACGTCCTTCGAGCACACGCCTTACCGATGGGGCTATTACCAAAGGGC
FD562604       --> ..................................................
EY925308       --> ..................................................

               251    -    301
UN09460        --> GTAAAGGAGTTCGACGTCGACGTGAAGACCGGACAGTTCTCGGTTTGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545116       <-- GTAGAGGAGTTCGACGTCGACGTGAAGACCGGACAGTTCTCGGTTTGGTT
FD544709       <-- GTAGA-GAGTTCGACGTCGACGTGAAGACCGGACAGTTCTCGGTTTGGTT
FD937144       <-- .........TTCGACGTCGACGTGAAGACCGGACAGTTCTCGGTTTGGTT
FD538661       <-- .............ACGTCGTCGTGAAGACCGGACAGTTCTCGGTTTGGTT
FD950901       <-- ..................................................
FD566469       <-- ..................................................
EY935572       <-- ..................................................
FD574666       <-- ..................................................
EY909890       <-- ..................................................
EY894011       <-- ..................................................
EY897799       --> GTAAAGGAGTTCGACGTCGACGTGAAGACCGGACAGTTCTCGGTTTGGTT
EY939681       --> GTAAAGGAGTTCGACGTCGACGTCGAGACCGGACAGTTCTCGGTTTGGTT
FD954697       --> GTAAAGGAGTTCGACGTCGACGTCGAGACCGGACAGTTCTCGGTTTGGTT
FD542649       --> GTAAAGGACTTCGACGTCGTCGTGAAGACCGGACAGTTCTCGGTTTGGTT
EY913698       --> GTAAAGGAGTTCGACGTCGACGTGAAGACCGGACAGTTCTCGGTTTGGTT
FD570708       --> GTAAAGGAGTTCGACGTCGACGTCGAGACCGGACAGTTCTCGGTTTGGTT
FD941523       --> GTAAAGGAGTTCGACGTCGACGTGAAGACCGGACAGTTCTCGGTTTGGTT
EV549697       --> GTAGAGGAGTTCGACGTCGACGTGAAGACCGGACAGTTCTCGGTTTGGTT
FD548532       --> GTAGAGGAGTTCGACGTCGACGTGAAGACCGGACAGTTCTCGGTTTGGTT
FD562604       --> ..................................................
EY925308       --> ..................................................

               301    -    351
UN09460        --> AAACCGATCTTGCAAGGCCAAGTACGAGAGCGAGATACATTACGAAGCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545116       <-- AAACCGATCTTGCAAGGCCAAGTACGAGAGCGAGATACATTACGAAGCCA
FD544709       <-- AAACCGATCTTGCAAGGCCAAGTACGAGAGCGAGATACATTACGAAGCCA
FD937144       <-- AAACCGATCTTGCAAGGCCAAGTACGAGAGCGAGATACATTACGAAGCCA
FD538661       <-- AAACCGATCTTGCAAGGCCAAGTACGAGAGCGAGATACATTACGAAGCCA
FD950901       <-- .........cTGCAAGGCCAAGTACGAGAGCGAGATACATTACGAAGCCA
FD566469       <-- ...................................gACATTACGAAGCCA
EY935572       <-- ..................................................
FD574666       <-- ..................................................
EY909890       <-- ..................................................
EY894011       <-- ..................................................
EY897799       --> AAACCGATCTTGCAAGGCCAAGTACGAGAGCGAGATACATTACGAAGCCA
EY939681       --> AAACCGATCTTGCAAGGCCAAGTACGAGAGCGAGATACATTACGAAGCCA
FD954697       --> AAACCGATCTTGCAAGGCCAAGTACGAGAGCGAGATACATTACGAAGCCA
FD542649       --> AAACCGATCTTGCAAGGCCAAGTACGAGAGCGAGATACATTACGAAGCCA
EY913698       --> AAACCGATCTTGCAAGGCCAAGTACGAGAGCGAGATACATTACGAAGCCA
FD570708       --> AAACCGATCTTGCAAGGCCAAGTACGAGAGCGAGATACATTACGAAGCCA
FD941523       --> AAACCGATCTTGCAAGGCCAAGTACGAGAGCGAGATACATTACGAAGCCA
EV549697       --> AAACCGATCTTGCAAGGCCAAGTACGAGAGCGAGATACATTACGAAGCCA
FD548532       --> AAACCGATCTTGCAAGGCCAAGTACGAGAGCGAGATACATTACGAAGCCA
FD562604       --> ...................................gACATTACGAAGCCA
EY925308       --> ..................................................

               351    -    401
UN09460        --> ACATCACGGGGACGATAGGCTACGGAAGCATCGGTGGTTTATCGGGTATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545116       <-- ACATCACGGGGACGATAGGCTACGGAAGCATCGGTGGTTTATCGGGTATA
FD544709       <-- ACATCACGGGGACGATAGGCTACGGAAGCATCGGTGGTTTATCGGGTATA
FD937144       <-- ACATCACGGGGACGATAGGCTACGGAAGCATCGGTGGTTTATCGGGTATA
FD538661       <-- ACATCACGGGGACGATAGGCTACGGAAGCATCGGTGGTTTATCGGGTATA
FD950901       <-- ACATCACGGGGACGATAGGCTACGGAAGCATCGGTGGTTTATCGGGTATA
FD566469       <-- ACATCACGGGGACGATAGGCTACGGAAGCATCGGTGGTTTATCGGGTATA
EY935572       <-- ..................................................
FD574666       <-- ..................................................
EY909890       <-- ..................................................
EY894011       <-- ..................................................
EY897799       --> ACATCACGGGGACGATAGGCTACGGAAGCATCGGTGGTTTATCGGGTATA
EY939681       --> ACATCACGGGGACGATAGGCTACGGAAGCATCGGTGGTTTATCGGGTATA
FD954697       --> ACATCACGGGGACGATAGGCTACGGAAGCATCGGTGGTTTATCGGGTATA
FD542649       --> ACATCACGGGGACGATAGGCTACGGAAGCATCGGTGGTTTATCGGGTATA
EY913698       --> ACATCACGGGGACGATAGGCTACGGAAGCATCGGTGGTTTATCGGGTATA
FD570708       --> ACATCACGGGGACGATAGGCTACGGAAGCATCGGTGGTTTATCGGGTATA
FD941523       --> ACATCACGGGGACGATAGGCTACGGAAGCATCGGTGGTTTATCGGGTATA
EV549697       --> ACATCACGGGGACGATAGGCTACGGAAGCATCGGTGGTTTATCGGGTATA
FD548532       --> ACATCACGGGGACGATAGGCTACGGAAGCATCGGTGGTTTATCGGGTATA
FD562604       --> ACATCACGGGGACGATAGGCTACGGAAGCATCGGTGGTTTATCGGGTATA
EY925308       --> ..................................................

               401    -    451
UN09460        --> TCGGCGCAGGATCTCTTCCTGTGGTTTCCGGTTAAAGGGATCCGTGTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545116       <-- TCGGCGCAGGATCTCTTCCTGTGGTTTCCGGTTAAAGGGATCCGTGTGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD544709       <-- TCGGCGCAGGATCTCTTCCTGTGGTTTCCGGTTAAAGGGATCCGTGTGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD937144       <-- TCGGCGCAGGATCTCTTTCTGTGGTTTCCGGTTAAAGGGATCCGTGTGGA  Raphanus sativus var. oleiformis
FD538661       <-- TCGGCTCAGGATCTCTTCCTGTGGTTTCCGGTTAAAGGGATCCGCGTGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD950901       <-- TCGGCGCAGGATCTCTTCCTGTGGTTTCCGGTTAAAGGGATCCGCGTGGA  Raphanus sativus cv Rat-Tail Radish #3870
FD566469       <-- TCGGCGCAGGATCTCTTTCTGTGGTTTCCGGTTAAAGGGATCCGTGTGGA  Raphanus sativus var. oleiformis
EY935572       <-- ....................GTGGTCTCCGGTTAAAGGGATCCGCGTGGA  Raphanus sativus cv Early Scarlet Globe
FD574666       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY909890       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY894011       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY897799       --> TCGGCGCAGGATCTCTTTCTGTGGTTTCCGGTTAAAGGGATCCGTGTGGA  Raphanus raphanistrum subsp. maritimus
EY939681       --> TCCGCGCAGGATCTCTTCCTGTGGTCTCCGGTTAAAGGGATCCGCGTGGA  Raphanus sativus cv Early Scarlet Globe
FD954697       --> TCGGCGCAGGATCTCTTCCTGTGGTTTCCGGTTAAAGGGATCCGCGTGGA  Raphanus sativus cv Rat-Tail Radish #3870
FD542649       --> TCGGCTCAGGATCTCTTCCTGTGGTTTCCGGTTAAAGGGATCCGCGTGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY913698       --> TCGGCGCAGGATCTCTTTCTGTGGTTTCCGGTTAAAGGGATCCGTGTGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570708       --> TCCGCGCAGGATCTCTTCCTGTGGTTTCCGGTTAAAGGGATCCGCGTGGA  Raphanus sativus cv Early Scarlet Globe
FD941523       --> TCGGCGCAGGATCTCTTTCTGTGGTTTCCGGTTAAAGGGATCCGTGTGGA  Raphanus sativus var. oleiformis
EV549697       --> TCGGCGCAGGATCTCTTCCTGTGGTTTCCGGTTAAAGGGATCCGTGTGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD548532       --> TCGGCGCAGGATCTCTTCCTGTGGTTTCCGGTTAAAGGGATCCGTGTGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD562604       --> TCGGCGCAGGATCTCTTTCTGTGGTTTCCGGTTAAAGGGATCCGTGTGGA  Raphanus sativus var. oleiformis
EY925308       --> ..................................................  Raphanus raphanistrum subsp. landra

               451    -    501
UN09460        --> CATACCTAGCTCCGGCGTTATATACTTCGATGTCGGAGTTGTTCGCAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545116       <-- CATACCTAGCTCCGGCGTTATATACTTCGATGTCGGAGTTGTTCGCAAGC
FD544709       <-- CATACCTAGCTCCGGCGTTATATACTTCGATGTCGGAGTTGTTCGCAAGC
FD937144       <-- CATACCTAGCTCCGGCGTTATATACTTCGATGTCGGAGTTGTTCGCAAGC
FD538661       <-- CATACCTAGCTCCGGCGTTATATACTTCGATGTCGGAGTTGTTCGCAAGC
FD950901       <-- CATACCTAGCTCCGGCGTTATATACTTCGATGTCGGAGTTGTTCGCAAGC
FD566469       <-- CATACCTAGCTCCGGCGTTATATACTTCGATGTCGGAGTTGTTCGCAAGC
EY935572       <-- CATACCTAGCTCCGGCGTTATATACTTCGATGTCGGTGTTGTTCGCAAGC
FD574666       <-- .............GGCGTTATATACTTCGATGTCGGTGTTGTTCGCAAGC
EY909890       <-- ...............................GTCGGAGTTGTTCGCAAGC
EY894011       <-- ..................................................
EY897799       --> CATACCTAGCTCCGGCGTTATATACTTCGATGTCGGAGTTGTTCGCAAGC
EY939681       --> CATACCTAGCTCCGGCGTTATATACTTCGATGTCGGTGTTGTTCGCAAGC
FD954697       --> CATACCTAGCTCCGGCGTTATATACTTCGATGTCGGAGTTGTTCGCAAGC
FD542649       --> CATACCTAGCTCCGGCGTTATATACTTCGATGTCGGAGTTGTTCGCAAGC
EY913698       --> CATACCTAGCTCCGGCGTTATATACTTCGATGTCGGAGTTGTTCGCAAGC
FD570708       --> CATACCTAGCTCCGGCGTTATATACTTCGATGTCGGTGTTGTTCGCAAGC
FD941523       --> CATACCTAGCTCCGGCGTTATATACTTCGATGTCGGAGTTGTTCGCAAGC
EV549697       --> CATACCTAGCTCCGGCGTTATATACTTCGATGTCGGAGTTGTTCGCAAGC
FD548532       --> CATACCTAGCTCCGGCGTTATATACTTCGATGTCGGAGTTGTTCGCAAGC
FD562604       --> CATACCTAGCTCCGGCGTTATATACTTCGATGTCGGAGTTGTTCGCAAGC
EY925308       --> ..................................................

               501    -    551
UN09460        --> GGTACTCCATGTCTTTGTTCGAGACTCCGAAAGATTGTGTTGCTGTTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545116       <-- GGTACTCCATGTCTTTGTTCGAGACTCCGAAAGATTGTGTTGCTGTTGAG
FD544709       <-- GGTACTCCATGTCTTTGTTCGAGACTCCGAAAGATTGTGTTGCTGTTGAG
FD937144       <-- GGTACTCCATGTCTTTGTTCGAGACTCCGTAAGATTGTGTTGCTGTTGAG
FD538661       <-- GGTACTCCATGTCTTTGTTCGAGACTCCGAAAGATTGTGTTGCTGTTGAG
FD950901       <-- GGTACTCCATGTCTTTGTTCGAGACTCCGAAAGATTGTGTTGCTGTTGAG
FD566469       <-- GGTACTCCATGTCTTTGTTCGAGACTCCGAAAGATTGTGTTGCTGTTGAG
EY935572       <-- GGTACTCCATGTCTTTGTTCGAGACTCCGAAAGATTGTGTTGCTGTTGAG
FD574666       <-- GGTACTCCATGTCTTTGTTCGAGACTCCGAAAGATTGTGCTGCTGTTGAG
EY909890       <-- GGTACTCCATGTCTTTGTTCGAGACTCCGAAAGATTGTGTTGCTGTTGAG
EY894011       <-- ..................................................
EY897799       --> GGTACTCCATGTCTTTGTTCGAGACTCCGAAAGATTGTGTTGCTGTTGAG
EY939681       --> GGTACTCCATGTCTTTGTTCGAGACTCCGAAAGATTGTGTTGCTGTTGAG
FD954697       --> GGTACTCCATGTCTTTGTTCGAGACTCCGAAAGATTGTGTTGCTGTTGAG
FD542649       --> GGTACTCCATGTCTTTGTTCGAGACTCCGAAAGATTGTGTTGCTGTTGAG
EY913698       --> GGTACTCCATGTCTTTGTTCGAGACTCCGAAAGATTGTGTTGCTGTTGAG
FD570708       --> GGTACTCCATGTCTTTGTTCGAGACTCCGAAAGATTGTGCTGCTGTTGAG
FD941523       --> GGTACTCCATGTCTTTGTTCGAGACTCCGTAAGATTGTGTTGCTGTTGAG
EV549697       --> GGTACTCCATGTCTTTGTTCGAGACTCCGAAAGATTGTGTTGCTGTTGAG
FD548532       --> GGTACTCCATGTCTTTGTTCGAGACTCCGAAAGATTGTGTTGCTGTTGAG
FD562604       --> GGTACTCCATGTCTTTGTTCGAGACTCCGAAAGATTGTGTTGCTGTTGAG
EY925308       --> .....................gGACTCCGAAAGATTGTGTTGCTGTTGAG

               551    -    601
UN09460        --> AAGGAAGCTGAGTTGTTTCGTGGGGATAATAAGATTCAGTCATCTATGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545116       <-- AAGGAAGCTGAGCTGTTTCGTCGGGATAATAAGATTCAGTCATCTATGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD544709       <-- AAGGAAGCTGAGCTGTTTCGTCGAGATAATAAGATTCAGTCATCTATGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD937144       <-- AAGGAAGCTGAGTTGTTTCGTGGGGATAATAAGATTCAGTCATCTATGTT  Raphanus sativus var. oleiformis
FD538661       <-- AAGGAAGCTGAGCTGTTTCGTGGGGATAATAAGATTCAGTCATCTATGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD950901       <-- AAGGAAGCTGAGTTGTTTCGTGGGGATAATAAGATTCAGTCATCTATGTT  Raphanus sativus cv Rat-Tail Radish #3870
FD566469       <-- AAGGAAGCTGAGTTGTTTCGTGGGGATAATAAGATTCAGTCATCTATGTT  Raphanus sativus var. oleiformis
EY935572       <-- AAGGAAGCTGAGTTGTTTCGTGGGGATAATAAGATTCAGTCATCTATGTT  Raphanus sativus cv Early Scarlet Globe
FD574666       <-- AAGGAAGCTGAGTTGTTTCGTGGGGATAATAAGATTCAGTCATCTATGTT  Raphanus sativus cv Early Scarlet Globe
EY909890       <-- AAGGAAGCTGAGTTGTTTCGTGGGGATAATAAGATTCAGTCATCTATGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY894011       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY897799       --> AAGGAAGCTGAGTTGTTTCGTGGGGATAATAAGATTCAGTCATCTATGTT  Raphanus raphanistrum subsp. maritimus
EY939681       --> AAGGAAGCTGAGTTGTTTCGTGGGGATAATAAGATTCAGTCATCTATGTT  Raphanus sativus cv Early Scarlet Globe
FD954697       --> AAGGAAGCTGAGTTGTTTCGTGGGGATAATAAGATTCAGTCATCTATGTT  Raphanus sativus cv Rat-Tail Radish #3870
FD542649       --> AAGGAAGCTGAGCTGTTTCGTGGGGATAATAAGATTCAGTCATCTATGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY913698       --> AAGGAAGCTGAGTTGTTTCGTGGGGATAATAAGATTCAGTCATCTATGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570708       --> AAGGAAGCTGAGTTGTTTCGTGGGGATAATAAGATTCAGTCATCTATGTT  Raphanus sativus cv Early Scarlet Globe
FD941523       --> AAGGAAGCTGAGTTGTTTCGTGGGGATAATAAGATTCAGTCATCTATGTT  Raphanus sativus var. oleiformis
EV549697       --> AAGGAAGCTGAGCTGTTTCGTCGGGATAATAAGATTCAGTCATCTATGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD548532       --> AAGGAAGCTGAGCTGTTTCGTCGAGATAATAAGATTCAGTCATCTATGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD562604       --> AAGGAAGCTGAGTTGTTTCGTGGGGATAATAAGATTCAGTCATCTATGTT  Raphanus sativus var. oleiformis
EY925308       --> AAGGAAGCTGAGTTGTTTCGTGGGGATAATAAGATTCAGTCATCCATGTT  Raphanus raphanistrum subsp. landra

               601    -    651
UN09460        --> GCAATTCTATGAAGTAGATCAAAGTGTTGGAAGAGGCATTGTGTAGCCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545116       <-- GCAATTTTACGAAGTAGATCAAAGTGTTGGAAGAGGCATTGTGTAGCCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD544709       <-- GCAATTCTACGAAGTAGATCAAAGTGTTGGAAGAGGCATTGTGTAGCCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD937144       <-- GCAATTCTATGAAGTAGATCAAAGTGTTGGAAGAGGCATTGTGTAGCCAA  Raphanus sativus var. oleiformis
FD538661       <-- GCAATTCTACGAAGTAGATCAAAGTGTTGGAAGAGGCATTGTGTAGCCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD950901       <-- GCAATTCTATGAAGTAGATCAAAGTGTTGGAAGAGGCATTGTGTAGCCAA  Raphanus sativus cv Rat-Tail Radish #3870
FD566469       <-- GCAATTCTATGAAGTAGATCAAAGTGTTGGAAGAGGCATTGTGTAGCCAA  Raphanus sativus var. oleiformis
EY935572       <-- GCAATTCTATGAAGTAGATCAAAGTGTCGGAAGAGGCATTGTGTAGCCAA  Raphanus sativus cv Early Scarlet Globe
FD574666       <-- GCAATTCTATGAAGTAGATCAAAGTGTTGGAAGAGGCATTGTGTAGCCAA  Raphanus sativus cv Early Scarlet Globe
EY909890       <-- GCAATTCTATGAAGTAGATCAAAGTGTTGGAAGAGGCATTGTGTAGCCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY894011       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY897799       --> GCAATTCTATGAAGTAGATCAAAGTGTTGGAAGAGGCATTGTGTAGCCAA  Raphanus raphanistrum subsp. maritimus
EY939681       --> GCAATTCTATGAAGTAGATCAAAGTGTCGGAAGAG-CATTGTGTAGCCAA  Raphanus sativus cv Early Scarlet Globe
FD954697       --> GCAATTCTATGAAGTAGATCAAAGTGTTGGAAGAGGCATTGTGTAGCCAA  Raphanus sativus cv Rat-Tail Radish #3870
FD542649       --> GCAATTCTACGAAGTAGATCAAAGTGTTGGAAGAGGCATTGTGTAGCCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY913698       --> GCAATTCTATGAAGTAGATCAAAGTGTTGGAAGAGGCATTGTGTAGCCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570708       --> GCAATTCTATGAAGTAGATCAAAGTGTTGGAAGAGGCATTGTGTAGCCAA  Raphanus sativus cv Early Scarlet Globe
FD941523       --> GCAATTCTATGAAGTAGATCAAAGTGTTGGAAGAGGCATTGTGTAGCCAA  Raphanus sativus var. oleiformis
EV549697       --> GCAATTCTACGAAGTAGATCAAAGTGTTGGAAGAGGCATTGTGTAGCCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD548532       --> GCAATTCTACGAAGTAGATCAAAGTGTTGGAAGAGGCATTGTGTAGCCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD562604       --> GCAATTCTATGAAGTAGATCAAAGTGTTGGAAGAGGCATTGTGTAGCCAA  Raphanus sativus var. oleiformis
EY925308       --> GCAACTCTATGAAGTAGATCAAAGTGTTGGAAGAGGCATTGTGTAGCCAA  Raphanus raphanistrum subsp. landra

               651    -    701
UN09460        --> AAAGAGTCGATGGCTGTTGTAATGAAGATGTGTTTACATTATACAAGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545116       <-- AAAGAGTCGATGGCTGTTGTAATGAAGATGTGTTTACATTATACAAGTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD544709       <-- AAAGAGTCGATGGCTGTTGTAATGAAGATGTGTTTACATTATACAAGTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD937144       <-- AAAGAGTCGATGGCTGTTGTAATGAAGATGTGTTTACATTATACAAGTTC  Raphanus sativus var. oleiformis
FD538661       <-- AAAGAGTCGATGGCTGTTGTAATGAAGATGTGTTTACATTATACAAGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD950901       <-- AAAGAGTCGATGGCTGTTGTAATGAAGATGTGTTTACATTATACAAGTTC  Raphanus sativus cv Rat-Tail Radish #3870
FD566469       <-- AAAGAGTCGATGGCTGTTGTAATGAAGATGTGTTTACATTATACAAGTTC  Raphanus sativus var. oleiformis
EY935572       <-- AAAAAGTCGATGGCTGTTGTAATGAAGATGTGTTTACATTATACAAGTTC  Raphanus sativus cv Early Scarlet Globe
FD574666       <-- AAAAAGTCGATGGCTGTTGTAATGAAGATGTGTTTACATTATACAAGTTC  Raphanus sativus cv Early Scarlet Globe
EY909890       <-- AAAGAGTCGATGGCTGTTGTAATGAAGATGTGTTTACATTATACAAGTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY894011       <-- ........................AAGATGTGTTTACATTATACAAGTTG  Raphanus raphanistrum subsp. maritimus
EY897799       --> AA-GAGTCGATGGCTGTTGTAATGAAGATGTGTTTACATTATACAAGTTC  Raphanus raphanistrum subsp. maritimus
EY939681       --> AAAa..............................................  Raphanus sativus cv Early Scarlet Globe
FD954697       --> AAAGAGTCGATGGCTGTTGTAATGAAGATGTGTTTACATTATACAAGTTC  Raphanus sativus cv Rat-Tail Radish #3870
FD542649       --> AAAGAGTCGATGGCTGTTGTAATGAAGATGTGTTTACATTATACAAGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY913698       --> AAAGAGTCGATGGCTGTTGTAATGAAGATGTGTTTACATTATACAAGTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570708       --> AAAAAGTCGATGGCTGTTGTAATGAAGATGTGTTTACATTATACAAGTTC  Raphanus sativus cv Early Scarlet Globe
FD941523       --> AA................................................  Raphanus sativus var. oleiformis
EV549697       --> AAAGAGTCGATGGCTGTTGTAATGAAGATGTGTTTACATTATACAAGTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD548532       --> AAAGAGTCGATGGCTGTTGTAATGAAGATGTGTTTACATTATACAAGTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD562604       --> AAA...............................................  Raphanus sativus var. oleiformis
EY925308       --> AAAGAGTCGATGGCTGTTGTAATGAAGATTTGTTTACATTATACAAGTTC  Raphanus raphanistrum subsp. landra

               701    -    751
UN09460        --> GAAACTTTTAGCTGCTCATGGATTTTTTGAAGACACACACACACCTT-CC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545116       <-- GAAACTTTTAGCTGCTCATGGATTTTTTGAAGACACACACACACCTT-CC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD544709       <-- GAAACTTTTAGCTGCTCATGGATTTTTTGAAGACACACACACACCTT-CC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD937144       <-- GAAACTTTTAGCTGCTCATGGGTTTTTTGAAGACACA----CACCTT-CC  Raphanus sativus var. oleiformis
FD538661       <-- GAAACTTTTAGCTGCTCATGGATTTTTTGAAGACACACACACACCTT-CC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD950901       <-- GAAACTTTTAGCTGCTCATGGATTTTTTGAAGACACACACACACCCT-CC  Raphanus sativus cv Rat-Tail Radish #3870
FD566469       <-- GAAACTTTTAGCTGCTCATGGGTTTTTTGAAGACACA----CACCTT-CC  Raphanus sativus var. oleiformis
EY935572       <-- GAAACTTTTAGCTGCTCATGGATTTTTTGAAGACACA----CACCTT-CC  Raphanus sativus cv Early Scarlet Globe
FD574666       <-- GAAACTTTTAGCTGCTCATGGATTTTTTGAAGACACA----CACCTT-CC  Raphanus sativus cv Early Scarlet Globe
EY909890       <-- GAAACTTTTAGCTGCTCATGGGTTTTTTGAAGACACA----CACCTT-CC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY894011       <-- GAAACTTTTAGCTGCTCATGGGTTTTTTGAAGACAC---ACC-CCTT-CC  Raphanus raphanistrum subsp. maritimus
EY897799       --> GAAACTTTTAGCTGCTCATGGGTTTTT-G-AGACACACAC----CTT-CC  Raphanus raphanistrum subsp. maritimus
EY939681       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD954697       --> GAAACTTTTAGCTGCTCATGGATTTT........................  Raphanus sativus cv Rat-Tail Radish #3870
FD542649       --> GAAACTTTTAGCTGCTCATGGATTTTTTGAAGACACACACACACCTT-CC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY913698       --> GAAACTTTTAGCTGCTCATGGGTTTTT-GAAGACACACA...........  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570708       --> GAAACTTTTAGCTGCTCATGGATTTTTTGAAGACACACAC----CTT-CC  Raphanus sativus cv Early Scarlet Globe
FD941523       --> ..................................................  Raphanus sativus var. oleiformis
EV549697       --> GAAAC.............................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD548532       --> GAAACTTTTAGCTGCTCATGGATTTTTTGAAGACACACACACACCTTTCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD562604       --> ..................................................  Raphanus sativus var. oleiformis
EY925308       --> GAAACTTTTAGCTGCTCATGGGTTTTTTGAAGACACACAC----CTT-CC  Raphanus raphanistrum subsp. landra

               751    -    801
UN09460        --> ATTTGAGGTCAGATACTCCTTTCTTCCCAAGTTGCTTTCATCACTCTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545116       <-- ATTTGAGGTCAGATACTCCTTTCTTCCCAAGTTGCTTTCATTACTCTGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD544709       <-- ATTTGAGGTCAGATACTCCTTTCTTCCCAAGTTGCTTTCATTACTCTGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD937144       <-- ATTTGAGGTCAGATACTCCTTTCTTCCCAAGTTGCTTTCATCACTCTGTT  Raphanus sativus var. oleiformis
FD538661       <-- ATTTGAGGTCAGATACTCCTTTCTTCCCAAGTTGCTTTCATTACTCTGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD950901       <-- ATTTGAGGTCAGATACTCCTTTCTTCCCAAGTTGCTTTCATCACTCTGTT  Raphanus sativus cv Rat-Tail Radish #3870
FD566469       <-- ATTTGAGGTCAGATACTCCTTTCTTCCCAAGTTGCTTTCATCACTCTGTT  Raphanus sativus var. oleiformis
EY935572       <-- ATTTGAGGTCAGATACTCCTTTCTTCCCAAGTTGCTTTCATCACTCTGTT  Raphanus sativus cv Early Scarlet Globe
FD574666       <-- ATTTGAGGTCAGATACTCCTTTCTTCCCAAGTTGCTTTCATCACTCTGTT  Raphanus sativus cv Early Scarlet Globe
EY909890       <-- ATTTGAGGTCAGATACTCCTTTCTTCCCAAGTTGCTTTCATCACTCTGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY894011       <-- ATTTGAGGTCAGATACTCCTTTCTTCCCAAGTTGCTTTCATCACTCTGTT  Raphanus raphanistrum subsp. maritimus
EY897799       --> ATTTGA-GTCAGATA...................................  Raphanus raphanistrum subsp. maritimus
EY939681       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD954697       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD542649       --> ATTTGAGGTCAGATACTCCTTTCTTCC-AAGTTGCTTTCATTACTCTGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY913698       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570708       --> ATTTGAGGTCAGATACTCCTTTCTTCCCAAGTTGCTTTCATCACTCTGTT  Raphanus sativus cv Early Scarlet Globe
FD941523       --> ..................................................  Raphanus sativus var. oleiformis
EV549697       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD548532       --> ATTTGAGGTCAGATACTCCTTTCTTCCCAAGTTGCTTTCATTACTCTGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD562604       --> ..................................................  Raphanus sativus var. oleiformis
EY925308       --> ATTTGAGGTCAGATACTCCTTTCTTCCCAAGTTGCTTTCATCACTCTATT  Raphanus raphanistrum subsp. landra

               801    -    851
UN09460        --> TGAAGTGAAAATGAAGAGAGAGTCATGTGAGCAAGTTAGATGGGAAGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545116       <-- TGAAGTGAAAATGA-GAGAGAGTCATGTGAGCAAGTTAGATGGGAAGAAC
FD544709       <-- TGAAGTGAAAATGA-GAGAGAGCCATGTGAGCAAGTTAGATGGGAAGAAC
FD937144       <-- TGAAATGAAAATGA-GAGAGAGTCATGTGAGCAAGTTAGATGGGAAGAAC
FD538661       <-- TGAAGTGAAAATGA-GAGAGAGTCATGTGAGCAAGTTAGATGGGAAGAAC
FD950901       <-- TGAAATGAAAATGA-GAGAGAGTCATGTGAGCAAGTTAGATGGGAAGAAC
FD566469       <-- TGAAATGAAAATGA-GAGAGAGTCATGTGAGCAAGTTAGATGGGAAGAAC
EY935572       <-- TGAAGTGAAAATGA-GAGAGAGTCATGTGAGCAAGTTAGATGGGAAGAAC
FD574666       <-- TGAAGTGAAAATGA-GAGAGAGTCATGTGAGCAAGTTAGATGGGAAGAAC
EY909890       <-- TGAAGTGAAAATGAAGAGAGAGTCATGTGAGCAAGTTAGATGGGAAGAAC
EY894011       <-- TGAAGTGAAAATGAAGAGAGAGTCATGTGAGCAAGTTAGATGGGAAGAAC
EY897799       --> ..................................................
EY939681       --> ..................................................
FD954697       --> ..................................................
FD542649       --> ..................................................
EY913698       --> ..................................................
FD570708       --> TGAAG.............................................
FD941523       --> ..................................................
EV549697       --> ..................................................
FD548532       --> TGAAGTGAAAATGA-GAGAGAGCCATGTGAGCAAGTTAGATGGGAAGAAC
FD562604       --> ..................................................
EY925308       --> TGAAGTGAAAATGAAGAGAGAGTCATGTGAGCAAGTTAGATGGGAAGAAC

               851    -    901
UN09460        --> AAGTGTTGGTGGGTTTTGTTTGAGATGTCCAGATTCATCACAGGTGACTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545116       <-- AAGTGTTGGTGGGTTTTGTTTGAGATGTCCAGATTCATCACAGGTGACTG
FD544709       <-- AAGTGTTGGTGGGTTTTGTTTGAGATGTCCAGATTCATCACAGGTGACTG
FD937144       <-- AAGTGTTGGTGGGTTTTGTTTGAGATGTCCAGATTCATCACAGGTGACTG
FD538661       <-- AAGTGTTGGTGGGTTTTGTTTGAGATGTCCAGATTCATCACAGGTGACTG
FD950901       <-- AAGTGTTGGTGGGTTTTGTTTGAGATGTCCAGATTCATCACAGGTGACTG
FD566469       <-- AAGTGTTGGTGGGTTTTGTTTGAGATGTCCAGATTCATCACAGGTGACTG
EY935572       <-- AAGTGTTGGTGGGTTTTGTTTGAGATGTCCAGATTCATCACAGGTGACTG
FD574666       <-- AAGTGTTGGTGGGTTTTGTTTGAGATGTCCAGATTCATCACAGGTGACTG
EY909890       <-- AAGTGTTGGTGGGTTTTGTTTGAGATGTCCAGATTCATCACAGGTGACTG
EY894011       <-- AAGTGTTGGTGGGTTTTGTTTGAGATGTCCAGATTCATCACAGGTGACTG
EY897799       --> ..................................................
EY939681       --> ..................................................
FD954697       --> ..................................................
FD542649       --> ..................................................
EY913698       --> ..................................................
FD570708       --> ..................................................
FD941523       --> ..................................................
EV549697       --> ..................................................
FD548532       --> AAGTGTTGGTGGGTTTTGTTTGAGATGTCCAGATTCATCAC.........
FD562604       --> ..................................................
EY925308       --> AAGTGTTGGTGGGTTTTGTTTGAGATGTCCAGATTCATCACAGGTGACTG

               901    -    951
UN09460        --> AATGTTTTTGTGAATTTTT-GCTTTTATGTTTTGCACTGTCATGCATCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545116       <-- AATGTTTTTGTGAATTTTT-GCTTTTATGTTTTGCACTGTCATGCATCTC
FD544709       <-- AATGTTTTTGTGAATTTTT-GCTTTTATGTTTTGCACTGTCATGCATCTC
FD937144       <-- AATGTTTTTGTGAATTTTT-GCTTTTATGTTTTGCACTGTCATGCATCTC
FD538661       <-- AATGTTTTTGTGAATTTTT-GCTTTTATGTTTTGCACTGTCATGCATCTC
FD950901       <-- AATGTTTTTGTGAATTTTT-GCTTTTATGTTTTGCACTGTCATGCATCTC
FD566469       <-- AATGTTTTTGTGAATTTTT-GCTTTTATGTTTTGCACTGTCATGCATCTC
EY935572       <-- AATGTTTTTGTGAATTTTTTGCTTTTATGTTTTGCACTGTCATGCATCTC
FD574666       <-- AATGTTTTTGTGAATTTTTTGCTTTTATGTTTTGCACTGTCATGCATCTC
EY909890       <-- AATGTATTTGTGAATTTTT-GCTTTTATGTTTTGCACTGTCATGCATCTC
EY894011       <-- AATGTATTTGTGAATTTTT-GCTTTTATGTTTTGCACTGTCATGCATCTC
EY897799       --> ..................................................
EY939681       --> ..................................................
FD954697       --> ..................................................
FD542649       --> ..................................................
EY913698       --> ..................................................
FD570708       --> ..................................................
FD941523       --> ..................................................
EV549697       --> ..................................................
FD548532       --> ..................................................
FD562604       --> ..................................................
EY925308       --> AATGTTTTTGTGAATTTTT-GCTTTTATGTTTTGCACTGTCATGCATCTC

               951    -   1001
UN09460        --> TATTCTCCCTGTAATATAATATACTTATAATCTATTGTATGATATGCATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545116       <-- TATTCTCCCTGTAATATAATATACTTATAATCTATTGTATGATATGCATG
FD544709       <-- TATTCTCCCTGTAATATAATATACTTATAATCTATTGTATGATATGCATG
FD937144       <-- TATTCTCCCTGTAATATAATATACTTATAATCTATTGTATGATATGCATG
FD538661       <-- TATTCTCCCTGTAATATAAT----ATATAATCTATTGTATGATATGCATG
FD950901       <-- TATTCTCCCTGTAATATAATATACTTATAATCTATTGTATGATATGCATG
FD566469       <-- TATTCTCCCTGTAATATAATATACTTATAATCTATTGTATGATATGCATG
EY935572       <-- TATTCTCCCTGTAATATAATATACTTATAATCTATTGTATGATATGCATG
FD574666       <-- TATTCTCCCTGTAATATAATATACTTATAATCTATTGTATGATATGCATG
EY909890       <-- TATTCTCCCTGTAATATAATATACTTATAATCTATTGTATGATATGCATG
EY894011       <-- TATTCTCCCTGTAATATAATATACTTATAATCTATTGTATGATATGCATG
EY897799       --> ..................................................
EY939681       --> ..................................................
FD954697       --> ..................................................
FD542649       --> ..................................................
EY913698       --> ..................................................
FD570708       --> ..................................................
FD941523       --> ..................................................
EV549697       --> ..................................................
FD548532       --> ..................................................
FD562604       --> ..................................................
EY925308       --> TATTCTCCCTGTAATATAATATACTTATAATCTATTGTATGATATGCATG

               1001   -   1051
UN09460        --> TCCATTTTGTAATCATATTCTTTTATCCCAATAAGATTTTGTATAGTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV545116       <-- TCCATTTTGTAATCATATTCTTTTATCCCAATAAGATTTTGTATAGTTTG
FD544709       <-- TCCATTTTGTAATCATATTCTTTTATCCCAATAAGATTTTGTATAGTTTG
FD937144       <-- TCCATTTTGTAATCATATTCTTTTATCCCAATAAGATTTTGTATAGTTTG
FD538661       <-- TCCATTTTGTAATCATATTCTTTTATCCCAATAAGATTTTGTATAGTTTG
FD950901       <-- TCCATTTTGTAATCATATTCTTTTATCCCAATAAGATTTTGTATAGTTTG
FD566469       <-- TCCATTTTGTAATCATATTCCTTTATCCCAATAAGATTTTGTAT......
EY935572       <-- TCCATTTTGTAATCATATTCTTTTATCCCAATAAGATTTTGTAT......
FD574666       <-- TCCATTTTGTAATCATATTCTTTTATCCCAATAAGATTTTGTATAGTTTG
EY909890       <-- TCCATTTTGTAATCATATTCTTTTATCCCAATAAGATTTTGTATAGTTTG
EY894011       <-- TCCATTTTGTAATCATATTCTTTTATCCCA....................
EY897799       --> ..................................................
EY939681       --> ..................................................
FD954697       --> ..................................................
FD542649       --> ..................................................
EY913698       --> ..................................................
FD570708       --> ..................................................
FD941523       --> ..................................................
EV549697       --> ..................................................
FD548532       --> ..................................................
FD562604       --> ..................................................
EY925308       --> TCCATTTTGTAATCATATTCTTTTATCCCAATAAGATTTTGTATAGTTTG

               1051   -   1101
UN09460        --> CAATACATTTGTTTTCCGAATATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~
EV545116       <-- CAATACATTTGTTTTCCG......
FD544709       <-- C.......................
FD937144       <-- C.......................
FD538661       <-- C.......................
FD950901       <-- C.......................
FD566469       <-- ........................
EY935572       <-- ........................
FD574666       <-- CAATACATTTGTTTTC-GAATATC
EY909890       <-- CAATACATTTCTTTTCCGAAT...
EY894011       <-- ........................
EY897799       --> ........................
EY939681       --> ........................
FD954697       --> ........................
FD542649       --> ........................
EY913698       --> ........................
FD570708       --> ........................
FD941523       --> ........................
EV549697       --> ........................
FD548532       --> ........................
FD562604       --> ........................
EY925308       --> CAA.....................