RadishBase

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Alignment for radish unigene UN09477

               1      -     51
UN09477        --> GTAAAAAAGGAAGACACTTTTTATTATTTTTTT-CTGAAAATAACCAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW732932       <-- ..................................................
EW726169       <-- ..................................................
EW724474       <-- ..................................................
EV569146       <-- ..................................................
FD579799       <-- ..................................................
FD551814       <-- ..................................................
FD576553       <-- ..................................................
FD987843       <-- ..................................................
FD987119       <-- ..................................................
FD579793       <-- ..................................................
EW737393       --> GTAAAAAAGGAAGAAACTTTTTATTATTTTTTT-CTGAAAATAACCAAAA
FD983809       --> GTAAAAAAGGAAGACACTTT--ATTATTTTTTTTCTGAAAATAACCAAAA
FD545403       --> .................................ctgaAAAATAACCAAAA
FD547654       --> .................................ctgaAAAATAACCAAAA
FD581029       --> .................................ctgaAAAATAACCAAAA
FD983219       --> .................................ctgaAAAATAACCAAAA
EW730453       --> ..................................................
EW728321       --> ..................................................

               51     -    101
UN09477        --> GTACATGACTAAAGAACCTAAAATAAGAAATAAA-GCCCTAATGG-AAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW732932       <-- ..................................................
EW726169       <-- ..................................................
EW724474       <-- ..................................................
EV569146       <-- ..................................................
FD579799       <-- ..................................................
FD551814       <-- ..................................................
FD576553       <-- ..................................................
FD987843       <-- ..................................................
FD987119       <-- ..................................................
FD579793       <-- ..................................................
EW737393       --> GTACATGACTAAAGAACCTAAAATAAGAAAAAAA-GCCCTAATGGGAAGA
FD983809       --> GTACATGACTAAAGAACCTAAAATAAGAAAAAAAAGCCCTAATGGGAAGA
FD545403       --> GTACATGACTAAAGAACCTAAAATAAGAAATAAA-GCCCTAATGG-AAGA
FD547654       --> GTACATGACTAAAGAACCTAAAATAAGAAATAAA-GCCCTAATGG-AAGA
FD581029       --> GTACATGACTAAAGAACCTAAAATAAGAAATAAA-GCCCTAATGG-AAGA
FD983219       --> GTACATGACTAAAGAACCTAAAATAAGAAATAAA-GCCCTAATGG-AAGA
EW730453       --> GTACATGACTAAAGAACCTAAAATAAGAAAAAAAAGCCCTAATGGGAAGA
EW728321       --> ..................................................

               101    -    151
UN09477        --> GGGACCCAAATAAGAGTTAGTAGATCTTGACGTGGCAAGTGCAGCGAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW732932       <-- ..................................................
EW726169       <-- ..................................................
EW724474       <-- ..................................................
EV569146       <-- ..................................................
FD579799       <-- ..................................................
FD551814       <-- ..................................................
FD576553       <-- ..................................................
FD987843       <-- ..................................................
FD987119       <-- ..................................................
FD579793       <-- ..................................................
EW737393       --> GGGACCCAAATAGGAGTTAGTAGATCTTGACGTGGCAAGTGCAGCGAAGT
FD983809       --> GGGACCCAAATAGGAGTTAGTAGATCTTGACGTGGCAAGTGCAGCGAAGT
FD545403       --> GGGACCCAAATAAGAGTTAGTAAATCTTGACGTGGCAAGTGCAGCGAAGT
FD547654       --> GGGACCCAAATAAGAGTTAGTAGATCTTGACGTGGCAAGTGCAGCGAAGT
FD581029       --> GGGACCCAAATAAGAGTTAGTAGATCTTGACGTGGCAAGTGCAGCGAAGT
FD983219       --> GGGACCCAAATAAGAGTTAGTAGATCTTGACGTGGCAAGTGCAGCGAAGT
EW730453       --> GGGACCCAAATAGGAGTTAGTAGATCTTGACGTGGCAAGTGCAGCGAAGT
EW728321       --> .............................ACGTGGCAAGTGCAGCGAAGT

               151    -    201
UN09477        --> AGGGGAAGGAAGTAGCGATCGTCGTAAAAGCCCAAAATGACATCAGAA-C
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW732932       <-- ........................................CATCAGAAAC  Raphanus sativus cv Rat-Tail Radish #3870
EW726169       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EW724474       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV569146       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD579799       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD551814       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD576553       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD987843       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD987119       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD579793       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW737393       --> AGAGGAAGGAAGTAGCGATCGTCGTAAAAGCCCAAAATGACATCAGAA-C  Raphanus sativus cv Rat-Tail Radish #3870
FD983809       --> AGAGGAAGGAAGTAGCGATCGTCGTAGAAGACCAAAATGACATCAGAA-C  Raphanus raphanistrum subsp. landra
FD545403       --> AGGGGAAGGAAGTAGCGATCGTCGTAAAATCCCAAAATGACATCAAAA-C  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547654       --> AGGGGAAGGAAGTAGCGATCGTCGTAAAATCCCAAAATGACATCAGAA-C  Raphanus raphanistrum subsp. raphanistrum (NY)
FD581029       --> AGGGGAAGGAAGTAGCGATCGTCGTAAAAGCCCAAAATGACATCAGAA-C  Raphanus sativus cv Rat-Tail Radish #3870
FD983219       --> AGGGGAAGGAAGTAGCGATCGTCGTAGAAGCCCAAAATGACATCAGAA-C  Raphanus raphanistrum subsp. landra
EW730453       --> AGAGGAAGGAAGTAGCGATCGTCGTAAAAGCCCAAAATGACATCAGAA-C  Raphanus sativus cv Early Scarlet Globe
EW728321       --> AGAGGAAGGAAGTAGCGATCGTCGTAAAAGCCCAAAATGACATCAGAA-C  Raphanus sativus cv Early Scarlet Globe

               201    -    251
UN09477        --> ACTCATTTCTCATGTTGACGAAAATGTTGCAGCATTGGTCAGTTACACGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW732932       <-- ACTCATTTCTCATGT-GACGAAAATGTTGCAGCATTGGTCAGTTACACGA
EW726169       <-- .............................................CACGA
EW724474       <-- ..................................................
EV569146       <-- ..................................................
FD579799       <-- ..................................................
FD551814       <-- ..................................................
FD576553       <-- ..................................................
FD987843       <-- ..................................................
FD987119       <-- ..................................................
FD579793       <-- ..................................................
EW737393       --> ACTCATTTCTCATGTTGACGAAAATGTTGCAGCATTGGTCAGTTACACGA
FD983809       --> ACTCATTTCTCATGTTGACGAAAATGTTGCAGCATTGGTCACTTACACGA
FD545403       --> ACTCATTTCTCATGTTGACGAAAATGTTGCAGCATTGGTCAGTTACACGA
FD547654       --> ACTCATTTCTCATGTTGACGAAAATGTTGCAGCATTGGTCAGTTACACGA
FD581029       --> ACTCATTTCTCATGTTGACGAAAATGTTGCAGCATTGGTCAGTTACACGA
FD983219       --> ACTCATTTCTCATGTTGACGAAAATGTTGCAGCATTGGTCAGTTACACGA
EW730453       --> ACTCATTTCTCATGTTGACGAAAATGTTGCAGCATTGGTCACTTACACGA
EW728321       --> ACTCATTTCTCATGTTGACGAAAATGTTGCAGCATTGGTCAGTTACACGA

               251    -    301
UN09477        --> AATCTCCCTGTGTAGTAACTTAGCTCTATCTGTTGCTTACATACTGCAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW732932       <-- AATCTCC-TGTGTAGTAACTTAGCTCTATCTGTTGCTTACATACTGCAGA
EW726169       <-- A-TCTCC-TGTGTAGTA-CT-AGCTCTATCTGT-GCT-ACATACTGCAGA
EW724474       <-- .ATCTCC-TGTGTAGTA-CTTAGCTCTATCTGTTGCTTACATACTGCAGA
EV569146       <-- ...........GTAGTAACTTAGCTCTATCTGTTGCTTACATACTGCAGA
FD579799       <-- ........................................ATACTGCAGA
FD551814       <-- ..................................................
FD576553       <-- ..................................................
FD987843       <-- ..................................................
FD987119       <-- ..................................................
FD579793       <-- ..................................................
EW737393       --> AATCTCCCTGTGTAGTAACTTAGCTCTATCTGTTGCTTACATACTGCAGA
FD983809       --> AATCTCCCTGTGTAGTAACTTAGCTCTATCTGTTGCTTACATACTGCAGA
FD545403       --> AATCTCCCTGTGTAGTAACTTAGCTCTATCTGTTGCTTACATACTGCAAA
FD547654       --> AATCTCCCTGTGTAGTAACTTAGCTCTATCTGTTGCTTACATACTGCAGA
FD581029       --> AATCTCCCTGTGTAGTAACTTAGCTCTATCTGTTGCTTACATACTGCAGA
FD983219       --> AATCTCCCTGTGTAGTAACTTAGCTCTATCTGTTGCTTACATACTGCAGA
EW730453       --> AATCTCCCTGTGTAGTAACTTAGCTCTATCTGTTGCTTACATACTGCAGA
EW728321       --> AATCTCCCTGTGTAGTAACTTAGCTCTATCTGTTGCTTACATACTGCAGA

               301    -    351
UN09477        --> CGGCCCAAATTCGGCC-ATGCAGTTAATGAAATGCCCCCACGGATTCCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW732932       <-- CGGCCCAAATTCGGCC-ATGCAGTTAATGAAATGCCCCCACGGATTCCAA  Raphanus sativus cv Rat-Tail Radish #3870
EW726169       <-- CG-CCCAAAT-C--GC-ATGCAGTTA-TGAA-TGCCCCCACGGATTCCAA  Raphanus sativus cv Early Scarlet Globe
EW724474       <-- CGGCCCAAAT-CGGCCCATGCAGTTAATGAAATGCCCCCACGGATTCCAA  Raphanus sativus cv Early Scarlet Globe
EV569146       <-- CGGCCCAAATTCGGCC-ATGCAGTTAATGAAATGTACCCACGGATTCCAA  Raphanus raphanistrum subsp. landra
FD579799       <-- CGGCCCAAATTCGGCC-ATGCAGTTAATGAAATGTACCCACGGATTCCAA  Raphanus sativus cv Rat-Tail Radish #3870
FD551814       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD576553       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD987843       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD987119       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD579793       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW737393       --> CGGCCCAAATTCGGCC-ATGCAGTTAATGAAATGCCCCCACGGATTCCAA  Raphanus sativus cv Rat-Tail Radish #3870
FD983809       --> CGGCCCAAATTCGGCC-ATGCAGTTAATGAAATGCCCCCACGGATTCCAA  Raphanus raphanistrum subsp. landra
FD545403       --> CGGCCCAAATTCGGCC-ATGCAGTTAATGAAATGTACCCACGGATTCCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547654       --> CGGCCCAAATTCGGCC-ATGCAGTTAATGAAATGTACCCACGGATTCCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD581029       --> CGGCCCAAATTCGGCC-ATGCAGTTAATGAAATGTACCCACGGATTCCAA  Raphanus sativus cv Rat-Tail Radish #3870
FD983219       --> CGGCCCATATTCGGCC-ATGCAGTTAATGAGATGTACCCACGGATTCCAA  Raphanus raphanistrum subsp. landra
EW730453       --> CGGCCCAAATTCGGCC-ATGCAGTTAATGAAATGCCCCCACGGATTCCAA  Raphanus sativus cv Early Scarlet Globe
EW728321       --> CGGCCCAAATTCGGCC-ATGCAGTTAATGAAATGCCCCCACGGATTCCAA  Raphanus sativus cv Early Scarlet Globe

               351    -    401
UN09477        --> TTCTGATAATGAGGCCATGGAGTTGATGGCGTTGTTGGCTCTTTTGGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW732932       <-- TTCTGATAATGAGGCCATGGAGTTGATGGCGTTGTTGGCTCTTTTGGAGG  Raphanus sativus cv Rat-Tail Radish #3870
EW726169       <-- TTCTGATAATGAGGCCATGGAGTTGATGGCGTTGTTGGCTCTTT-GGAGG  Raphanus sativus cv Early Scarlet Globe
EW724474       <-- TTCTGATAATGAGGCCATGGAGTTGATGGCGTTGTTGGCTCTTTTGGAGG  Raphanus sativus cv Early Scarlet Globe
EV569146       <-- TTCTGATAATGAGGCCATGGAGTTGATGGCGTTGTTGGCTCTTTTGGAGG  Raphanus raphanistrum subsp. landra
FD579799       <-- TTCTGATAATGAGGCCATGGAGTTGATGGCGTTGCTGGCTCTTTTGGAGG  Raphanus sativus cv Rat-Tail Radish #3870
FD551814       <-- .................................GTTGGCTCTTTTGGAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD576553       <-- ..............................................GAGG  Raphanus sativus cv Rat-Tail Radish #3870
FD987843       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD987119       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD579793       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW737393       --> TTCTGATAATGAGGCCATGGAGTTGATGGCGTTGTTGGCTCTTTTGGAGG  Raphanus sativus cv Rat-Tail Radish #3870
FD983809       --> TTCTGATAATGAGGCCATGGAGTTGATGGCGTTGTTGGCTCTTTTGGAGG  Raphanus raphanistrum subsp. landra
FD545403       --> TTCTGATAATGAGGCCATGGAGTTGATGGCGTTGTTGGCTCTTTTGGAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547654       --> TTCTGATAATGAGGCCATGGAGTTGATGGCGTTGTTGGCTCTTTTGGAGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD581029       --> TTCCGATAATGAGGCCATGGAGTTGATGGCGTTGTTGGCTCTTTTGGAGG  Raphanus sativus cv Rat-Tail Radish #3870
FD983219       --> TTCTGATAATGAGGCCATGGAGTTGATGGCGTTGTTGGCTCTTTTGGAGG  Raphanus raphanistrum subsp. landra
EW730453       --> TTCTGATAATGAGGCCATGGAGTTGATGGCGTTGTTGGCTCTTTTGGAGG  Raphanus sativus cv Early Scarlet Globe
EW728321       --> TTCTGATAATGAGGCCATGGAGTTGATGGCGTTGTTGGCTCTTTTGGAGG  Raphanus sativus cv Early Scarlet Globe

               401    -    451
UN09477        --> AGATTGTGCTGGGATTGATTCGTGTGGCGGTGGTGGAGAGGGAATGATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW732932       <-- GGATTGTGCTGGGATTGATTCGTGTGCCGGTGGTGGAGAGGGAATGATCA  Raphanus sativus cv Rat-Tail Radish #3870
EW726169       <-- GGATTGTGCTGGGATTGATTCGTGTGGCGGTGGTGGAGAGGGAATGATCA  Raphanus sativus cv Early Scarlet Globe
EW724474       <-- GGATTGTGCTGGGATTGATTCGTGTGCCGGTGGTGGAGAGGGAATGATCA  Raphanus sativus cv Early Scarlet Globe
EV569146       <-- AGATTGTGCTGGGATTGATTCGTGTGGCGGTGGTGGAGAGGGAATGATCA  Raphanus raphanistrum subsp. landra
FD579799       <-- AGATTGTGCTGGGATTGATTCGTGTGGCGGTGGTGGAGAGGGAATGATCA  Raphanus sativus cv Rat-Tail Radish #3870
FD551814       <-- AGATTGTGCTGGGATTGATTCGTGTGGCGGTGGTGGAGAGGGAATGATCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD576553       <-- AGATTGTGCTGGGATTGATTCGTGTGGCGGTGGTGGAGAGGGAATGATCA  Raphanus sativus cv Rat-Tail Radish #3870
FD987843       <-- .................ATTCGTGTGGCGGTGGTGGAGAGG-AATGATCA  Raphanus raphanistrum subsp. landra
FD987119       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD579793       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW737393       --> GGATTGTGCTGGGATTGATTCGTGTGCCGGTGGTGGAGAGGGAATGATCA  Raphanus sativus cv Rat-Tail Radish #3870
FD983809       --> GGATTGTGCTGGGATTGATTCGTGTGGCGGTGGTGGAGAGGGAATGATCA  Raphanus raphanistrum subsp. landra
FD545403       --> AGATTGTGCTGGGATTGATTCGTGTGGCGGTGGTGGAGAGGGAATGATCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD547654       --> AGATTGTGCTGGGATTGATTCGTGTGGCGGTGGTGGAGAGGGAATGATCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD581029       --> AGATTGTGCTGGGATTGATTCGTGTGGCGGTGGTGGAGAGGGAATGATCA  Raphanus sativus cv Rat-Tail Radish #3870
FD983219       --> AGATTGTGCTGGGATTGATTCGTGTGGCGGTGGTGGAGAGGGAATGATCA  Raphanus raphanistrum subsp. landra
EW730453       --> GGATTGTGCTGGGATTGATTCGTGTGGCGGTGGTGGAGAGGGAATGATCA  Raphanus sativus cv Early Scarlet Globe
EW728321       --> GGATTGTGCTGGGATTGATTCGTGTGCCGGTGGTGGAGAGGGAATGATCA  Raphanus sativus cv Early Scarlet Globe

               451    -    501
UN09477        --> GAGTGGAGGTTTTAGGAAGTGGGGGAGACTGATTTGGAGTCAGAGATGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW732932       <-- GAGTGGAGGTTTTAGGAAGTGGGGGAGACTGATTTGGAGTCAGAGATGAT
EW726169       <-- GAGTGGAGGTTTTAGGGAGTGGGGGAGACTGATTTGGAGTCAGAGATGAT
EW724474       <-- GAGTGGAGGTTTTAGGAAGTGGGGGAGACTGATTTGGAGTCAGAGATGAT
EV569146       <-- GAGTGGAGGTTTTAGGAAGTGGGGGAGACTGATTTGGAGTCAGAGATGAT
FD579799       <-- GAGTGGAGGTTTTAGGAAGTGGGGGAGACTGATTTGAAGTCAGAGATGAT
FD551814       <-- GAGTGGAGGTTTTAGGAAGTGGGGGAGACTGATTTGGAGTCAGAGATGAT
FD576553       <-- GAGTGGAGGTTTTAGGAAGTGGGGGAGACTGATTTGGAGTCAGAGATGAT
FD987843       <-- GAGTGGAGGTTT-AGGAAGTGGGG-AGACTGATT-GGAGTCAGAGATGAT
FD987119       <-- ........................................CAGAGATGAT
FD579793       <-- ..................................................
EW737393       --> GAGTGGAGGTTTTAGGAAGTGGGGGAGACTGATTTGGAGTCAGAGATGAT
FD983809       --> GAGTGGAGGTTTTAGGAAGTGGGGGAGACTGATTTGGAGTCAGAGATGAT
FD545403       --> GAGTGGAGGTTTTAGGAAGTGGGGGAGACTGATTTGGAGTCAGA......
FD547654       --> GAGTGGAGGTTTTAGGAAGTGGGGGAGACTGATTTGGAGTCAGAGATGAT
FD581029       --> GAGTGGAGGTTTTAGGAAGTGGGGGAGACTGATTTGGAGTCAGAAATGAT
FD983219       --> GAGTGGAGGTTTTAAGAAGTGGGGGAGACTGATTTGGAGTCAGAGATGAT
EW730453       --> GAGTGGAGGTTTTAGGGAGTGGGGGAGACTGATTTGGAGTCAGAGATGAT
EW728321       --> GAGTGGAGGTTTTAGGAAGTGGGGGAGACTGATTTGGAGTCAGAAATGAT

               501    -    551
UN09477        --> GGGTTAGGAGGTGGAGGAGACTTTTTTAGAGCTGGACGCGGAGGTGATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW732932       <-- GGGTTAGGAGGTGGAGGAGACTTTTTTAGAGCTGGACGCGGAGGTGATGG
EW726169       <-- GGGTTAGGAGGTGGAGGAGACTTTTTTAGAGCTGGACGCAGAGGTGATGG
EW724474       <-- GGGTTAGGAGGTGGAGGAGACTTTTTTAGAGCTGGACGCGGAGGTGATGG
EV569146       <-- GGGTTAGGAGGTGGAGGAGACTTTTTTAGAGCTGGACGCGGAGGTGGTGG
FD579799       <-- GGGTTAGGGGGTGGAGGAGACTTTTTTAGAGCTGGACGCGGAGGTGGTGG
FD551814       <-- GGGTTAGGAGGTGGAGGAGACTTTTTTAAAGCTGGACGCGGAGGTGATGG
FD576553       <-- GGGTTAGGAGGTGGAGGAGACTTTTTTAGAGCTGGACGCGGAGGTGGTGG
FD987843       <-- GGGTTAGGAGGTGGAGGAGACTTTTTTAGAGCTGGACGCAGAGGTGATGG
FD987119       <-- GGGTTAGGAGGTGGAGGAGACTTTTTTAGAGCTGGACGCGGAGGTGGTGG
FD579793       <-- ..................................................
EW737393       --> GGGTTAGGAGGTGGAGGAGACTTTTTTAGAGCTGGACCCGGAGGTGATGG
FD983809       --> GGGTTAGGAGGTGGAGGAGACTTTTTTAGAGCTGGACGCAGAGGTGATGG
FD545403       --> ..................................................
FD547654       --> GGGTTAGGAGGTGGAGGAGACTTTTTTAAAGCTGGACCCGGAGGTGATGG
FD581029       --> GGGTTAGGAGGTGGAGGAAACTTTTTTAGAGCTGGACGCGGAGGTGGTGG
FD983219       --> GGGTTAGGAGGTGGAGGAGACTTTT.........................
EW730453       --> GGGTTAGGAGGTGGAGGAGACTTTTTTAGAGCTGGACGCAGAGGTGATGG
EW728321       --> GGGTTAGGAGGTGGAGGAAACTTTTTT.......................

               551    -    601
UN09477        --> TGTAGGTGATGGCGGAGACTTTTT-AGGAGTCGGTGGAGGGGATGGTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW732932       <-- TGTAGGTGATGGCGGAGACTTTTT-AGGAGTCGGTGGAGGGGATGGTTTA
EW726169       <-- TGTAGGTGATGGCGGAGACTTTTT-AGGAGTCGGTGGAGGGGATGGTTTA
EW724474       <-- TGTAGGTGATGGCGGAGACTTTTT-AGGAGTCGGTGGAGGGGATGGTTTA
EV569146       <-- TGTAGGTGATGGCGGAGACTTTTT-AGGAGTCGGTTGAGGGGATGGTTTA
FD579799       <-- TGTAGGTGATGGCGGAGACTTTTT-AGGAGTCGGTTGAGGGGATGGTTTA
FD551814       <-- TGTAGGTGATGGCGGAGACGTTTT-AGGAGTCGGTGGAGGGGATTGTTTA
FD576553       <-- CGTAGGTGATGGCGGAGACTTTTT-AGGAGTCGGTTGAGGGGATGGTTTA
FD987843       <-- TGTAGGTGATGGCGGAGACTTTTTTAGGAGTCGGTGGAGGGGATGGTTTA
FD987119       <-- TGTAGGTGATGGCGGAGACTTTTT-AGGAGTCGGTTGAGGGGATGGTTTA
FD579793       <-- ..................................................
EW737393       --> TGTAGGTGATGGCGGAGACTTTTT-AGGAGTCGGTGGAGGGGATGGTTTA
FD983809       --> TGTAGGTGATGGCGGAGACTTTTTTAGGAGTCGGTGGAGGGGATGGTTTA
FD545403       --> ..................................................
FD547654       --> TGTAGGTGATGGCGGAGACGTTTT-AGGAGTCGGTGGAGGGGATTGTTTA
FD581029       --> CGTAGGTGATGGCGGA..................................
FD983219       --> ..................................................
EW730453       --> TGTAGGTGATGGCGGAGACTTTTT-AGGAGTCGGTGGAGGGGATGGTTTA
EW728321       --> ..................................................

               601    -    651
UN09477        --> TAAGGCGGAGGAGACTTTTTT-GGAGCTGGAGGCGGAGGTGAGGGTTTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW732932       <-- TAAGGCGGAGGAGACTTTTTT-GGAGCTGGAGGCGGAGGTGAGGGTTTAG
EW726169       <-- TAAGGCGGAGGAGACTTTTTT-GGAGCTGGAGGCGGAGGTGAGGGTTTAG
EW724474       <-- TAAGGCGGAGGAGACTTTTTT-GGAGCTGGAGGCGGAGGTGAGGGTTTAG
EV569146       <-- TAAGGCGGAGGAGACTTTTTT-GGAGCTGGAGGCGGAGGTGAGGGTTTAG
FD579799       <-- TAAGGCGGAGGAGACTTTTTT-GGAGCTGGAGGCGGAGGTGAGGGTTTAG
FD551814       <-- TAAGGCGGAGGAGACTTTTTT-GGAGCTGGAGGCGGAGGTGAGGGTTTAG
FD576553       <-- TAAGGCGGAGGAGACTTTTTT-GGAGCTGGAGGCGGAGGTGAGGGTTTAG
FD987843       <-- TAAGGCGGAGGAGACTTTTTTTGGAGCTGGAGGCGGAGGTGAGGGTTTAG
FD987119       <-- TAAGGCGGAGGAGACTTTTTT-GGAGCTGGAGGCGGAGGTGAGGGTTTAG
FD579793       <-- ..................................................
EW737393       --> TAAGGCGGAGGAGACTTTTTT-GGAGCTGGAGGCGGAGGTGAGGGTTTAG
FD983809       --> TAAGGCGGAGGAGACTTTTTTTGGAGCTGGAGGCGGAGGTGAGGGT....
FD545403       --> ..................................................
FD547654       --> TAAGGCGGAGGAGACTTTTTT-GGAGCTGGAGGCGGAGGTGAGGGTTTAG
FD581029       --> ..................................................
FD983219       --> ..................................................
EW730453       --> TAAGGCGGAGGAGACTTTTTT-GGAGCTGGAGGCGGAGGTGAGGGTTTAG
EW728321       --> ..................................................

               651    -    701
UN09477        --> GAGGCGGAGGTGATTGTTTAGGAGGTGGAAGAGATGGGTTAGGAGGTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW732932       <-- GAGGCGGAGGTGATTGTTTAGGAGGTGGAAGAGATGGGTTAGGAGGTGGA
EW726169       <-- GAGGCGGAGGTGATTGTTTAGGAGGCGGAAGAGATGGGTTAGGAGGTGGA
EW724474       <-- GAGGCGGAGGTGATTGTTTAGGAGGTGGAAGAGATGGGTTAGGAGGTGGA
EV569146       <-- GAGGCGGAGGTGATTGTTTAGGAGGTGGAAGAGATGGGTTAGGAGGTGGA
FD579799       <-- GAGGCGGAGGTGATTGTTTAGGAGGTGGAAGAGATGGGTTAGGAGGTGGA
FD551814       <-- GAGGCGGAGGTGATTGTTTAGGAGGCGGAAGAGATGGGTTAGGAGGTGGA
FD576553       <-- GAGGCGGAGGTGATTGTTTAGGAGGTGGAAGAGATGGGTTAGGAGGTGGA
FD987843       <-- GAGGCGGAGGTGATTGTTTAGGAGGCGGAAGAGATGGGTTAGGAGGTGGA
FD987119       <-- GAGGCGGAGGTGATTGTTTAGGAGGTGGAAGAGATGGGTTAGGAGGTGGA
FD579793       <-- ..................................................
EW737393       --> GAGGCGGAGGTGATTGTTTAGGAGGTGGAAGAGATGGGTTAGGAGGTGGA
FD983809       --> ..................................................
FD545403       --> ..................................................
FD547654       --> GAGGCGGAGGTGATTGTTTAGGAGGCGGAAGAGATGGGTTAG........
FD581029       --> ..................................................
FD983219       --> ..................................................
EW730453       --> GAGGCGGAGGTGATTGTTTAGGAGGCGGAAGAGATGGGTTAGGAGGTGGA
EW728321       --> ..................................................

               701    -    751
UN09477        --> GGAGACTTCTTTGGAGTTGGACGTGGAGGTGAGGGTTTAAGTGGTGGCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW732932       <-- GGAGACTTCTTTGGAGTTGGACGTGGAGGTGAGGGTTTAAGTGGTGGCGG
EW726169       <-- GGAGACTTCTTTGGAGTTGGACGTGGAGGTGAGGGTTTAAGTGGTGGCGG
EW724474       <-- GGAGACTTCTTTGGAGTTGGACGTGGAGGTGAGGGTTTAAGTGGTGGCGG
EV569146       <-- GGAGACTTCTTTGGAGTTGGACGTGGAGGTGAGGGTTTAAGTGGTGGCGG
FD579799       <-- GGAGACTTGTTTGGAGTTGGACGTGGAGGTGAGGGTTTAAGTGGTGGCGG
FD551814       <-- GGAGACTTCTTTGGAGTTGGACGTGGAGGTGAGGGTTTAAGTGGTGGCGG
FD576553       <-- GGAGACTTCTTTGGAGTTGGACGTGGAGGTGAGGGTTTAAGTGGTGGCGG
FD987843       <-- GGAGACTTCTTTGGAGTTGGACGTGGAGGTGAGGGTTTAAGTGGTGGCGG
FD987119       <-- GGAGACTTCTTTGGAGTTGGACGTGGAGGTGAGGGTTTAAGTGGTGGCGG
FD579793       <-- .......TCTTTGGAGTTGGACGTGGAGGTGAGGGTTTAAGCGGTGGCGG
EW737393       --> GGAGACTTCTTTGGAGTTGGACGTGGAGGTGAGGGTTTAAGTGGTGGCGG
FD983809       --> ..................................................
FD545403       --> ..................................................
FD547654       --> ..................................................
FD581029       --> ..................................................
FD983219       --> ..................................................
EW730453       --> GGAGACTTCTTTGGAGTTGGACGTGGAGGTGAGGGTTTAAGTGGTGGCGG
EW728321       --> ..................................................

               751    -    801
UN09477        --> AGCCGTCTTAGGAGCCGGGGGAGATGACGGAGTTGTTGGCTTTCGTGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW732932       <-- AGCCGTCTTAGGAGCCGGGGGAGATGACGGAGTTGTTGGCTTTCGTGAGG
EW726169       <-- AGCCGTCTTAGGAGCCGGGGGAGATGACGGAGTCGTTGGCTTTCGTGAGG
EW724474       <-- AGCCGTCTTAGGAGCCGGGGGAGATGACGGAGTTGTTGGCTTTCGTGAGG
EV569146       <-- AGCCGTCTTAG--GCCGTGGGAGATGACGGAGTTGTTGGCTCTCGTGAGG
FD579799       <-- AGCTGTCTTAGGAGCCGTGGGAGATGACGGAGTTGTTGGCTTTCGTGAGG
FD551814       <-- AGCCGTCTTAGGAGCCGCGGGAGATGACGGAGTTGTTGGCTTTCGTGAGG
FD576553       <-- AGCCGTCTTAGGAGCCGTGGGAGATGACGGAGTTGTTGGCTTTCGTGAGG
FD987843       <-- AGCCGTCTTAGGAGCCGGGGGAGATGACGGAGTTGTTGGCTTTCGTGAGG
FD987119       <-- AGCCGTCTTAGGAGCCGTGGGAGATGACGGAGTTGTTGGCTTTCGTGAGG
FD579793       <-- AGCCGTCTTAGGAGCCGGGGGAGATGACGGAGTTGTTGGCTTTCGTGAGG
EW737393       --> AGCCGTCTTAGGAGCCGGGGGAGATGACGGAGTTGTTGGC..........
FD983809       --> ..................................................
FD545403       --> ..................................................
FD547654       --> ..................................................
FD581029       --> ..................................................
FD983219       --> ..................................................
EW730453       --> AGCCGTCTTAGGAGCCGGG...............................
EW728321       --> ..................................................

               801    -    851
UN09477        --> GTGGTTGAGGAGGTGAAGGGTAACTAATAGAAATGGCGGCTCCAGATCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW732932       <-- GTGGTTGAGGAGGTGAAGGGTAACTAATAGAAATGGCGGCTCCAGATCCG
EW726169       <-- GTGGTTGAGGAGGTGAAGGGTAACTAATAGAAATGGCGGCTCCAGATCCG
EW724474       <-- GTGGTTGAGGAGGTGAAGGGTAACTAATAGAAATGGCGGCTCCAGATCCG
EV569146       <-- GTGGTTGAGGAGGTGAAGGGTAACTAATAGAAATGGCGGCTCCAGATCCG
FD579799       <-- GTGGTTGAGGAGGTGAAGGGTAACTAATAGAAATGGCGGCTCCAGATCCG
FD551814       <-- GTGGTTGAGGAGGTGAAGGGTAACTAATAGAAATGGCGGCTCCAGATCCG
FD576553       <-- GTGGTTGAGGAGGTGAAGGGTAACTAATAGAAATGGCGGCTCCAGATCCG
FD987843       <-- GTGGTTGAGGAGGTGAAGGGTAA-TAATAGAAATGGCGGCTCCc......
FD987119       <-- GTGGTTGAGGAGGTGAAGGGTAACTAATAGAAATGGCGGCTCCAGATCCG
FD579793       <-- GTGGTTGAGGAGGTGAAGGGTAACTAATAGAAATGGCGGCTCCAGATCCG
EW737393       --> ..................................................
FD983809       --> ..................................................
FD545403       --> ..................................................
FD547654       --> ..................................................
FD581029       --> ..................................................
FD983219       --> ..................................................
EW730453       --> ..................................................
EW728321       --> ..................................................

               851    -    901
UN09477        --> TTGTTATGGGTACATTTCCATACTTTGGAATCTCCGAAATTGAATTTACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW732932       <-- TTGTTATGGGTACATTTCCATACTTTGGAATCTCCGAAATTGAATTTACC
EW726169       <-- TTGTTATGGGTACATTTCCATACTTTGGAATCTCCGAAATTGAATTTACC
EW724474       <-- TTGTTATGGGTACATTTCCATACTTTGGAATCTCCGAAATTGAATTTACC
EV569146       <-- TTGTTATGGGTACATTTCCATACTTTGGAATCTCCGAAATTGAATTTACC
FD579799       <-- TTGTTATGGGTACATTTCCATACTTTGGAATCTCCGAAATTGAATTTACC
FD551814       <-- TTGTTATGGGTACATTTCCATACTTTGGAATCTCCGAAATTGAATTTACC
FD576553       <-- TTGTTATGGGTACATTTCCATACTTTGGAATCTCCGAAATTGAATTTACC
FD987843       <-- ..................................................
FD987119       <-- TTGTTATGGGTACATTTCCATACTTTGGAATCTCCGAAATTGAATTTACC
FD579793       <-- TTGTTATGGGTACATTTCCATACTTCGGAATCTCCGAAATTGAATTTACC
EW737393       --> ..................................................
FD983809       --> ..................................................
FD545403       --> ..................................................
FD547654       --> ..................................................
FD581029       --> ..................................................
FD983219       --> ..................................................
EW730453       --> ..................................................
EW728321       --> ..................................................

               901    -    951
UN09477        --> AGCGTATAAGTGGGGTTGTGGTTGGCCGGCATTCATCAGGTACTCCTCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW732932       <-- AGCGTATAAGTGGGGTTGTGGTTGGCCGGCATTCATCAGGTACTCCTCAT
EW726169       <-- AGCGTATAAGTGGGGTTGTGGTTGGCCGGCATTCATCAGCTTCTCCTCAT
EW724474       <-- AGCGTATAAGTGGGGTTGTGGTTGGCCGGCATTCATCAGGTACTCCTCAT
EV569146       <-- AGCGTATAAGTGGGGTTGTGGTTGGCCGGCATTCATCAGGTACTCCTCAT
FD579799       <-- AGCGTATAAGTGGGGTTGTGGTTGGCCGGCATTCATCAGGTACTCCTCAT
FD551814       <-- AGCGTATAAGTGGGGTTGTGGTTGGCCGGCATTCATCAGCTTCTCCTCAT
FD576553       <-- AGCGTATAAGTGGGGTTGTGGTTGGCCGGCATTCATCAGGTACTCCTCAT
FD987843       <-- ..................................................
FD987119       <-- AGCGTATAAGTGGGGTTGTGGTTGGCCGGCATTCATCAGGTACTCCTCAT
FD579793       <-- AGCGTATAAGTGGGGTTGTGGTTGGCCGGCATTCATCAGGTACTCCTCAT
EW737393       --> ..................................................
FD983809       --> ..................................................
FD545403       --> ..................................................
FD547654       --> ..................................................
FD581029       --> ..................................................
FD983219       --> ..................................................
EW730453       --> ..................................................
EW728321       --> ..................................................

               951    -   1001
UN09477        --> TAGAGACTTCTGAAGGTTTTGGCCAAACTCCCATCGCTGTGGACGGTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW732932       <-- TAGAGACTTCTGAAGGTTTTGGCCAAACTCCCATCGCTGTG-ACGGTGGA
EW726169       <-- TAGAGACTTCTGAAGGTTTTGGCCAACCTCCCATCGCTGTGGACGGTGAA
EW724474       <-- TAGAGACTTCTGAAGGTTTTGGCCAAACTCCCATCGCTGTGGACGGTGGA
EV569146       <-- TAGAGACTTCTGAAGGTTTTGGCCAAACTCCCATCGCTGTGGACGGTGGA
FD579799       <-- TAGAGACTTCTGAAGGTTTTGGCCAAACTCCCATCGCTGTGGACGGTGGA
FD551814       <-- TAGAGACTTCTGAAGGTTTTGGCCAAACTCCCATCGCTGTGGACGGTGGA
FD576553       <-- TAGAGACTTCTGAAGGTTTTGGCCAAACTCCCATCGCTGTGGACGGTGGA
FD987843       <-- ..................................................
FD987119       <-- TAGAGACTTCTGAAGGTTTTGGCCAAACTCCCATCGCTGTGGACGGTGGA
FD579793       <-- TAGAGACTTCTGAAGGTTTTGGCCAAACTCCCATCGCTGTGGACGGTGGA
EW737393       --> ..................................................
FD983809       --> ..................................................
FD545403       --> ..................................................
FD547654       --> ..................................................
FD581029       --> ..................................................
FD983219       --> ..................................................
EW730453       --> ..................................................
EW728321       --> ..................................................

               1001   -   1051
UN09477        --> ACAATGACATAGAGGAGAGCTACGACGACGATAATGAGGCTTTTCATTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW732932       <-- ACAATGACATAGAGGAGAGCTACGACGACGATAATGAGGCTTTTCATTGT
EW726169       <-- ACAATGACACAGAGGAGAGCTACGACGACGATAATGAGGCTTTTCATTGT
EW724474       <-- ACAATGACATAGAGGAGAGCTACGACGACGATAATGAGGCTTTTCATTGT
EV569146       <-- ACAATGACATAGAGGAGAGCTACGACGACGATAATGAGGCTTTTCATTGT
FD579799       <-- ACAATGACATAGAGGAGAGCTACGACGACGATAATGAGGCTTTTCATTGT
FD551814       <-- ACAATGACACAGAGGAGAGCTACGACGACGATAATGAGGCTTTTCATTGT
FD576553       <-- ACAATGACATAGAGGAGAGCTACGACGACGATAATGAGGCTTTTCATTGT
FD987843       <-- ..................................................
FD987119       <-- ACAATGACATAGAGGAGAGCTACGACGACGATAATGAGGCTTTTCATTGT
FD579793       <-- ACAATGACATAGAGGAGAGCTACGACGACGATAATGAGGCTTTTCATTGT
EW737393       --> ..................................................
FD983809       --> ..................................................
FD545403       --> ..................................................
FD547654       --> ..................................................
FD581029       --> ..................................................
FD983219       --> ..................................................
EW730453       --> ..................................................
EW728321       --> ..................................................

               1051   -   1101
UN09477        --> TGACTGTGTGCGAAATGAATTGAGTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW732932       <-- TGACTGTGTGCGAAATGAATTGAGTC.
EW726169       <-- TGACTGTGTGCGAAATGAATTcc....
EW724474       <-- TGACTGTGTGCGAAATGAATTGAGTCC
EV569146       <-- TGACTGTGTGCGAAATGAATTcc....
FD579799       <-- TGACTGTGTGCGAAATGAATTGAGTCC
FD551814       <-- TGACTGTGTGCGAAATGAATccc....
FD576553       <-- TGACTGTGTGCGAAATGAATTcc....
FD987843       <-- ...........................
FD987119       <-- TGACTGTGTGCGAAATGAATTcc....
FD579793       <-- TGACTGTGTGCGAAATGAATTGAGTCC
EW737393       --> ...........................
FD983809       --> ...........................
FD545403       --> ...........................
FD547654       --> ...........................
FD581029       --> ...........................
FD983219       --> ...........................
EW730453       --> ...........................
EW728321       --> ...........................