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Alignment for radish unigene UN09478

               1      -     51
UN09478        --> GGCTAGTACCACCACCGAGTTGCGCCGTTTATATCTTTCATTTGCTCTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768811       <-- ..................................................
EY911618       <-- ..................................................
EX752104       <-- ..................................................
EW739504       <-- ..................................................
EX759451       <-- ..................................................
EY915849       --> GGCTAGTACCACCACCGAGTTGCGCCGTTTATATCTTTCATTTGCTCTCG
EX764995       --> ........................CCGTTTATATCTTTCATTTGCTCTCG
FY434890       --> ..................................CTTTCATTTGCTCTCG
FY430188       --> ...........................................GCTCTCG
FY436608       --> ..................................................
FY439614       --> ..................................................
FY436080       --> ..................................................
FY434645       --> ..................................................
EX748052       --> ..................................................
EW735407       --> ..................................................

               51     -    101
UN09478        --> CAGGAAGCTGTTAGTGGCAGTTTCAATCGGTGACGATGAAGTTCAACGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768811       <-- ..................................................
EY911618       <-- ..................................................
EX752104       <-- ..................................................
EW739504       <-- ..................................................
EX759451       <-- ..................................................
EY915849       --> CAGGAAGCTGTTAGTGGCAGTTTCAATCGGTGACGATGAAGTTCAACGTC
EX764995       --> CAGGAAGCTGTTAGTGGCAGTTTCAATCGGTGACGATGAAGTTTAACGTC
FY434890       --> CAGGAAGCTGTTAGTGGCAGTTTCAATCGGTGACGATGAAGTTCAACGTC
FY430188       --> CAGGAAGCTGTTAGTGGCAGTTTCAATCGGTGACGATGAAGTTCAACGTC
FY436608       --> ........TGTTAGTGGCAGTTTCAATCGGTGACGATGAAGTTCAACGTC
FY439614       --> ...............GGCAGTTT-AATCGGTGACGATGAAGTTCAACGTC
FY436080       --> ..........................TCGGTGACGATGAAGTTCAACGTC
FY434645       --> ..................................................
EX748052       --> ..................................................
EW735407       --> ..................................................

               101    -    151
UN09478        --> GCGAATCCCACCACTGGTTGCCAGAAGAAGCTCGAGATCGACGATGACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768811       <-- ..................................................
EY911618       <-- ..................................................
EX752104       <-- ..................................................
EW739504       <-- ..................................................
EX759451       <-- ..................................................
EY915849       --> GCGAATCCCACCACTGGTTGCCAGAAGAAGCTCGAGATCGACGATGACCA
EX764995       --> GCGAATCCCACCACTGGTTGCCAGAAGAAGCTCGAGATCGACGATGACCA
FY434890       --> GCGAATCCCACCACTGGTTGCCAGAAGAAGCTCGAGATCGACGATGACCA
FY430188       --> GCGAATCCCACCACTGGTTGCCAGAAGAAGCTCGAGATCGACGATGACCA
FY436608       --> GCGAATCCCACCACTGGTTGCCAGAAGAAGCTCGAGATCGACGATGACCA
FY439614       --> GCGAATCCCACCACTGGTTGCCAGAAGAAGCTCGAGATCGACGATGACCA
FY436080       --> GCGAATCCCACCACTGGTTGCCAGAAGAAGCTCGAGATCGACGATGACCA
FY434645       --> ..................................................
EX748052       --> ..................................................
EW735407       --> ..................................................

               151    -    201
UN09478        --> AAAGCTCCGTGCTTTTTACGACAAGAGGCTCTCTCAGGAAGTTAGCGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768811       <-- ................................................TG
EY911618       <-- ..................................................
EX752104       <-- ..................................................
EW739504       <-- ..................................................
EX759451       <-- ..................................................
EY915849       --> AAAGCTCCGTGCTTTTTACAACAAGAGGCTCTCTCTGGAAGTTAGCGGTG
EX764995       --> AAAGCTCCGTGCTTTTTACGACAAGAGGCTCTCTCAGGAAGTTAGCGGTG
FY434890       --> AAAGCTCCGTGCTTTTTACGACAAGAGGCTCTCTCAGGAAGTTAGCGGTG
FY430188       --> AAAGCTCCGTGCTTTTTACGACAAGAGGCTCTCTCAGGAAGTTAGCGGTG
FY436608       --> AAAGCTCCGTGCTTTTTACGACAAGAGGCTCTCTCAGGAAGTTAGCGGTG
FY439614       --> AAAGCTCCGTGCTTTTTACGACAAGAGGCTCTCTCAGGAAGTTAGCGGTG
FY436080       --> AAAGCTCCGTGCTTTTTACGACAAGAGGCTCTCTCAGGAAGTTAGCGGTG
FY434645       --> ....CTCCGTGCTTTTTACGACAAGAGGCTCTCTCAGGAAGTTAGCGGTG
EX748052       --> ..................................................
EW735407       --> ..................................................

               201    -    251
UN09478        --> ATGCTTTGGGCGAGGAATTCAAGGGGTACGTCTTCAAGATCATGGGAGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768811       <-- ATGCTTTGG-CGAGGA-TTCAAGGGGTACGTGTTCAAGATCATGGGAGGA
EY911618       <-- ..................................................
EX752104       <-- ..................................................
EW739504       <-- ..................................................
EX759451       <-- ..................................................
EY915849       --> ATGCTTTGGGCGAGGAATTCAAGGGGTACGTCTTCAAGATCATGGGAGGT
EX764995       --> ATGCTTTGGGCGAGGAATTCAAGGGGTACGTGTTCAAGATCATGGGAGGA
FY434890       --> ATGCTTTGGGCGAGGAATTCAAGGGGTACGTCTTCAAGATCATGGGAGGT
FY430188       --> ATGCTTTGGGCGAGGAATTCAAGGGGTACGTCTTCAAGATCATGGGAGGT
FY436608       --> ATGCTTTGGGCGAGGAATTCAAGGGGTACGTCTTCAAGATCATGGGAGGT
FY439614       --> ATGCTTTGGGCGAGGAATTCAAGGGGTACGTCTTCAAGATCATGGGAGGT
FY436080       --> ATGCTTTGGGCGAGGAATTCAAGGGGTACGTCTTCAAGATCATGGGAGGT
FY434645       --> ATGCTTTGGGCGAGGAATTCAAGGGGTACGTCTTCAAGATCATGGGAGGT
EX748052       --> ..................................................
EW735407       --> ..................................................

               251    -    301
UN09478        --> TGCGACAAGCAAGGTTTCCCAATGAAACAGGGAGTTCTAACCCCTGGTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768811       <-- TGTGACAAGCAAGGTTTTCCAATGAAACAGGGAGTTCTCACCCCTGGTCG
EY911618       <-- ..................................................
EX752104       <-- ..................................................
EW739504       <-- ..................................................
EX759451       <-- ..................................................
EY915849       --> TGCGACAAGCAAGGTTTCCCAATGAAACAGGGAGTTCTA...........
EX764995       --> TGTGACAAGCAAGGTTTTCCAATGAAACAGGGAGTTCTCACCCCTGGTCG
FY434890       --> TGCGACAAGCAAGGTTTCCCAATGAAACAGGGAGTTCTAACCCCTGGTCG
FY430188       --> TGCGACAAGCAAGGTTTCCCAATGAAACAGGGAGTTCTAACCCCTGGTCG
FY436608       --> TGCGACAAGCAAGGTTTCCCAATGAAACAGGGAGTTCTAACCCCTGGTCG
FY439614       --> TGCGACAAGCAAGGTTTCCCAATGAAACAGGGAGTTCTAACCCCTGGTCG
FY436080       --> TGCGACAAGCAAGGTTTCCCAATGAAACAGGGAGTTCTAACCCCTGGTCG
FY434645       --> TGCGACAAGCAAGGTTTCCCAATGAAACAGGGAGTTCTAACCCCTGGTCG
EX748052       --> ..................................................
EW735407       --> ..................................................

               301    -    351
UN09478        --> TGTCCGCCTTTTGCTTCACCGAGGTACTCCTTGCTTCAGAGGACACGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768811       <-- TGTCCGCCTTTTGCTTCACCGAGGTACTCCTTGTTTCAGAGGACACGGAA
EY911618       <-- ..................................................
EX752104       <-- ..................................................
EW739504       <-- ..................................................
EX759451       <-- ..................................................
EY915849       --> ..................................................
EX764995       --> TGTCCGCCTTTTGCTTCACCGAGGTACTCCTTGTTTCAGAGGACACGGAA
FY434890       --> TGTCCGCCTTTTGCTTCACCGAGGTACTCCTTGCTTCAGAGGACACGGAA
FY430188       --> TGTCCGCCTTTTGCTTCACCGAGGTACTCCTTGCTTCAGAGGACACGGAA
FY436608       --> TGTCCGCCTTTTGCTTCACCGAGGTACTCCTTGCTTCAGAGGACACGGAA
FY439614       --> TGTCCGCCTTTTGCTTCACCGAGGTACTCCTTGCTTCAGAGGACACGGAA
FY436080       --> TGTCCGCCTTTTGCTTCACCGAGGTACTCCTTGCTTCAGAGGACACGGAA
FY434645       --> TGTCCGCCTTTTGCTTCACCGAGGTACTCCTTGCTTCAGAGGACACGGAA
EX748052       --> ..................................................
EW735407       --> ..................................................

               351    -    401
UN09478        --> GGAGGACTGGAGAGAGGAGAAGAAAGTCTGTCCGTGGTTGCATTGTAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768811       <-- GGAGGACTGGAGAGAGGAGAAGAAAGTCTGTCCGTGGTTGCATTGTCAGC
EY911618       <-- ..................................................
EX752104       <-- ..................................................
EW739504       <-- ..................................................
EX759451       <-- ..................................................
EY915849       --> ..................................................
EX764995       --> GGAGGACTGGAGAGAGGAGAAGAAAGTCTGTCCGTGGTTGCATTGTCAGC
FY434890       --> GGAGGACTGGAGAGAGGAGAAGAAAGTCTGTCCGTGGTTGCATTGTAAGC
FY430188       --> GGAGGACTGGAGAGAGGAGAAGAAAGTCTGTCCGTGGTTGCATTGTAAGC
FY436608       --> GGAGGACTGGAGAGAGGAGAAGAAAGTCTGTCCGTGGTTGCATTGTAAGC
FY439614       --> GGAGGACTGGAGAGAGGAGAAGAAAGTCTGTCCGTGGTTGCATTGTAAGC
FY436080       --> GGAGGACTGGAGAGAGGAGAAGAAAGTCTGTCCGTGGTTGCATTGTAAGC
FY434645       --> GGAGGACTGGAGAGAGGAGAAGAAAGTCTGTCCGTGGTTGCATTGTAAGC
EX748052       --> ..................................................
EW735407       --> ..................................................

               401    -    451
UN09478        --> CAAGACCTTTCTGTGCTTAACTTGGTCATTGTCAAGAAGGGTGAGAAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768811       <-- CAGGACCTTTCTGTTCTTAACTTGGTCATTGTCAAGAAGGGTGAGAAGGA
EY911618       <-- .................................................A
EX752104       <-- ..................................................
EW739504       <-- ..................................................
EX759451       <-- ..................................................
EY915849       --> ..................................................
EX764995       --> CAGGACCTTTCTGTTCTTAACTTGGTCATTGTCAAGAAGGGTGAGAAGGA
FY434890       --> CAAGACCTTTCTGTGCTTAACTTGGTCATTGTCAAGAAGGGTGAGAAGGA
FY430188       --> CAAGACCTTTCTGTGCTTAACTTGGTCATTGTCAAGAAGGGTGAGAAGGA
FY436608       --> CAAGACCTTTCTGTGCTTAACTTGGTCATTGTCAAGAAGGGTGAGAAGGA
FY439614       --> CAAGACCTTTCTGTGCTTAACTTGGTCATTGTCAAGAAGGGTGAGAAGGA
FY436080       --> CAAGACCTTTCTGTGCTTAACTTGGTCATTGTCAAGAAGGGTGAGAAGGA
FY434645       --> CAAGACCTTTCTGTGCTTAACTTGGTCATTGTCAAGAAGGGTGAGAAGGA
EX748052       --> ..................................................
EW735407       --> ..................................................

               451    -    501
UN09478        --> TCTTCCTGGGCTTACCGACACCGAGAAGCCAAGGATGAGAGGTCCCAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768811       <-- TCTTCCTGGGCTTACCGACACCGAGAAGCCAAGGATGAGAGGTCCCAAGA
EY911618       <-- TCTCCCCGGGCTTACCGACACCGAGAAGCCAAGGATGAGAGGTCCCAAGA
EX752104       <-- .....................................gGAGGTCCCAAGA
EW739504       <-- .................................................g
EX759451       <-- ..................................................
EY915849       --> ..................................................
EX764995       --> TCTTCCTGGGCTTACCGACACCGAGAAGCCAAGGATGAGAGGTCCCAAGA
FY434890       --> TCTTCCTGGGCTTACCGACACCGAGAAGCCAAGGATGAGAGGTCCCAAGA
FY430188       --> TCTTCCTGGGCTTACCGACACCGAGAAGCCAAGGATGAGAGGTCCCAAGA
FY436608       --> TCTTCCTGGGCTTACCGACACCGAGAAGCCAAGGATGAGAGGTCCCAAGA
FY439614       --> TCTTCCTGGGCTTACCGACACCGAGAAGCCAAGGATGAGAGGTCCCAAGA
FY436080       --> TCTTCCTGGGCTTACCGACACCGAGAAGCCAAGGATGAGAGGTCCCAAGA
FY434645       --> TCTTCCTGGGCTTACCGACACCGAGAAGCCAAGGATGAGAGGTCCCAAGA
EX748052       --> .....................................gGAGGTCCCAAGA
EW735407       --> .................................................g

               501    -    551
UN09478        --> GAGCGTCAAAGATCCGCAAGTTGTTCAACCTCACTAAGGATGATGATGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768811       <-- GAGCTTCTAAGATCCGCAAGTTGTTCAACCTCACTAAGGATGATGATGTC
EY911618       <-- GAGCGTCAAAGATCCGCAAGTTGTTCAACCTCACTAAGGATGATGATGTC
EX752104       <-- GAGCGTCAAAGATCCGCAAGTTGTTCAACCTCACTAAGGATGATGATGTC
EW739504       <-- GAGCGTCAAAGATCCGCAAGTTGTTCAACCTCACTAAGGATGATGATGTC
EX759451       <-- ..................................................
EY915849       --> ..................................................
EX764995       --> GAGCTTCTAAGATCCGCAAGTTGTTCAACCTCACTAAGGATGATGATGTC
FY434890       --> GAGCGTCAAAGATCCGCAAGTTGTTCAACCTCACTAAGGATGATGATGTC
FY430188       --> GAGCGTCAAAGATCCGCAAGTTGTTCAACCTCACTAAGGATGATGATGTC
FY436608       --> GAGC-TCAAAGA-CCGCAAGTTGTTCA-CCTCACT...............
FY439614       --> GAGCGTCAAAGATCCGCAAGTTGTTCAACCTCACTAAGGATGATGATGTC
FY436080       --> GAGCGTCAAAGATCCGCAAGTTGTTCAACCTCACTAAGGATGATGATGTC
FY434645       --> GAGCGTCAAAGATCCGCAAGTTGTTCAACCTCACTAAGGATGATGATGTC
EX748052       --> GAGCGTCAAAGATCCGCAAGTTGTTCAACCTCACTAAGGATGATGATGTC
EW735407       --> GAGCGTCAAAGATCCGCAAGTTGTTCAACCTCACTAAGGATGATGATGTC

               551    -    601
UN09478        --> AGGAAGTACGTCAACACTTACCGCCGCAAATTCACTAACAAGAAAGGTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768811       <-- AGGAAGTACGTCAACACTTACCGCCGCAAATTCACTAACAAGAAAGGTAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911618       <-- AGGAAGTACGTCAACACTTACCGCCGCAAATTCACTAACAAGAAAGGTAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX752104       <-- AGGAAGTACGTCAACACTTACCGCCGCAAATTCACTAACAAGAAAGGTAA  Raphanus raphanistrum subsp. maritimus
EW739504       <-- AGGAAGTACGTCAACACTTACCGCCGCAAATTCACTAACAAGAAAGGTAA  Raphanus sativus cv Rat-Tail Radish #3870
EX759451       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY915849       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX764995       --> AGGAAGTACGTCAACACTTACCGCCGCAAATTCACTAACAAGAAAGGTAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY434890       --> AGGAAGTACGTCAACACTTACCGCCGCAAATTCACCAACAAGAAAGGTAA  Raphanus sativus cv GSK3-1
FY430188       --> AGGAAGTACGTCAACACTTACCGCCGCAAATTCACCAACAAGAAAGGTAA  Raphanus sativus cv GSK3-1
FY436608       --> ..................................................  Raphanus sativus cv GSK3-1
FY439614       --> AGGAAGTACGTCAACACTTACCGCCGCAAATTCACCAACAAGAAAGGTAA  Raphanus sativus cv GSK3-1
FY436080       --> AGGAAGTACGTCAACACTTACCGCCGCAAATTCACCAACAAGAAAGGTAA  Raphanus sativus cv GSK3-1
FY434645       --> AGGAAGTACGTCAACACTTACCGCCGCAAATTCACCAACAAGAAAGGTAA  Raphanus sativus cv GSK3-1
EX748052       --> AGGAAGTACGTCAACACTTACCGCCGCAAATTCACTAACAAGAAAGGTAA  Raphanus raphanistrum subsp. maritimus
EW735407       --> AGGAAGTACGTCAACACTTACCGCCGCAAATTCACTAACAAGAAAGGTAA  Raphanus sativus cv Rat-Tail Radish #3870

               601    -    651
UN09478        --> GGAAGTGAGCAAAGCCCCCAAGATCCAGAGGCTTGTGACTCCTTTGACAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768811       <-- GGAAGTGAGCAAAGCCCCCAAGATCCAGAGGCTTGTGACTCCTTTGACAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911618       <-- GGAAGTGAGCAAAGCCCCCAAAATCCAGAGGCTTGTGACTCCTTTGACAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX752104       <-- GGAAGTGAGCAAAGCCCCCAAAATCCAGAGGCTTGTGACTCCTTTGACAC  Raphanus raphanistrum subsp. maritimus
EW739504       <-- GGAAGTGAGCAAAGCCCCCAAAATCCAGAGGCTTGTGACTCCTTTGACAC  Raphanus sativus cv Rat-Tail Radish #3870
EX759451       <-- .................CCAAGTTCCAGAGGCTTGTGACTCCTTTGACAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY915849       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX764995       --> GGAAGTGAGCAAAGCCCCCAAGATCCAGAG-CTTGTGACTCCTTTGACAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FY434890       --> GGAAGTGAGCAAAGCCCCCAAGATCCAGAGGCTTGTGACTTCTTTGACAC  Raphanus sativus cv GSK3-1
FY430188       --> GGAAGTGAGCAAAGCCCCCAAGATCCAGAGGCTTGTGACTTCTTTGACAC  Raphanus sativus cv GSK3-1
FY436608       --> ..................................................  Raphanus sativus cv GSK3-1
FY439614       --> GGAAGTGAGCAAAGCCCCCAAGATCCAGAGGCTTGTGACTTCTTTGACAC  Raphanus sativus cv GSK3-1
FY436080       --> GGAAGTGAGCAAAGCCCCCAAGATCCAGAGGCTTGTGACTTCTTTGACAC  Raphanus sativus cv GSK3-1
FY434645       --> GGAAGTGAGCAAAGCCCCCAAGATCCAGAGGCTTGTGACTTCTTTGACAC  Raphanus sativus cv GSK3-1
EX748052       --> GGAAGTGAGCAAAGCCCCCAAAATCCAGAGGCTTGTGACTCCTTTGACAC  Raphanus raphanistrum subsp. maritimus
EW735407       --> GGAAGTGAGCAAAGCCCCCAAAATCCAGAGGCTTGTGACTCCTTTGACAC  Raphanus sativus cv Rat-Tail Radish #3870

               651    -    701
UN09478        --> TTCAGAGGAAGAGAGCTAGAATTGCCGACAAGAAGAAGAGAATCGCCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768811       <-- TTCAGAGGAAGAGAGCTAGAATTGCCGACAAGAAGAAGAGAATCGCCAAG
EY911618       <-- TTCAGAGGAAGAGAGCTAGAATTGCCGACAAGAAGAAGAGAATCGCCAAG
EX752104       <-- TTCAGAGGAAGATAGCTAGAATTGCCGACAAGAAGAAGAGAATCGCCAAG
EW739504       <-- TTCAGAGGAAGAGAGCTAGAATTGCCGACAAGAAGAAGAGAATCGCCAAG
EX759451       <-- TTCAGAGGAAGAGAGCTAGAATTGCCGACAAGAAGAAGAGAATCGCCAAG
EY915849       --> ..................................................
EX764995       --> TTCAGAGGAAGAGAGCTAGAATTGCCGACAAGAAGA-GAGAATCG.....
FY434890       --> TTCAGAGGAAGAGAGCTAGAATTGCCGACAAGAAGAAGAGAATCGCCAAG
FY430188       --> TTCAGAGGAAGAGAGCTAGAATTGCCGACAAGAAGAAGAGAATCGCCAAG
FY436608       --> ..................................................
FY439614       --> TTCAGAGGAAGAGAGCTAGAATTGCCGACAAGAAGAAGAGAATCGCCAAG
FY436080       --> TTCAGAGGAAGAGAGCTAGAATTGCCGACAAGAAGAAGAGAATCGCCAAG
FY434645       --> TTCAGAGGAAGAGAGCTAGAATTGCCGACAAGAAGAAGAGAATCGCCAAG
EX748052       --> TTCAGAGGAAGATAGCTAGAATTGCCGACAAGAAGAAGAGAATCGCCAAG
EW735407       --> TTCAGAGGAAGAGAGCTAGAATTGCCGACAAGAAGAAGAGAATCGCCAAG

               701    -    751
UN09478        --> GCTAACTCTGATGCTGCTGAGTACCAGAAGCTTCTTGCCTCCAGGCTTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768811       <-- GCTAACTCTGATGCTGCTGAGTACCAGAAGCTTCTTGCCTCCAGGCTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911618       <-- GCTAACTCTGATGCTGCTGAGTACCAGAAGCTTCTTGCCTCCAGGCTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX752104       <-- GCTAACTCTGATGCTGCTGAGTACCAGAAGCTTCTTGCCTCCAGGCTCAA  Raphanus raphanistrum subsp. maritimus
EW739504       <-- GCTAACTCTGATGCTGCTGAGTACCAGAAGCTTCTTGCCTCCAGGCTCAA  Raphanus sativus cv Rat-Tail Radish #3870
EX759451       <-- GCTAACTCTGATGCTGCTGAGTACCAGAAGCTTCTCGCCTCCAGGCTTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY915849       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX764995       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY434890       --> GCTAACTCTGATGCTGCTGAGTACCAGAAGCTTCTCGCCTCCAGGCTTAA  Raphanus sativus cv GSK3-1
FY430188       --> GCTAACTCTGATGCTGCTGAGTACCAGAAGCTTCTCGCCTCCAGGCTTAA  Raphanus sativus cv GSK3-1
FY436608       --> ..................................................  Raphanus sativus cv GSK3-1
FY439614       --> GCTAACTCTGATGCTGCTGAGTACCAGAAGCTTCTCGCCTCCAGGCTTAA  Raphanus sativus cv GSK3-1
FY436080       --> GCTAACTCTGATGCTGCTGAGTACCAGAAGCTTCTCGCCTCCAGGCTTAA  Raphanus sativus cv GSK3-1
FY434645       --> GCTAACTCTGATGCTGCTGAGTACCAGAAGCTTCTCGCCTCCAGGCTTAA  Raphanus sativus cv GSK3-1
EX748052       --> GCTAACTCTGATGCTGCTGAGTACCAGAAGCTTCTTGCCTCCAGGCTCAA  Raphanus raphanistrum subsp. maritimus
EW735407       --> GCTAACTCTGATGCTGCTGAGTACCAGAAGCTTCTTGCCTCCAGGCTCAA  Raphanus sativus cv Rat-Tail Radish #3870

               751    -    801
UN09478        --> GGAGCAGCGTGATCGCCGTAGTGAAAGTTTGGCCAAGAAGAGGTCTAGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768811       <-- GGAGCAGCGTGATCGCCGTAGTGAAAGTTTGGCCAAGAAGAGGTCTAGGC
EY911618       <-- GGAGCAGCGTGATCGCCGTAGTGAAAGTTTGGCCAAGAAGAGGTCTAGGC
EX752104       <-- GGAGCAGCGTGATCGCCGTAGTGAAAGTTTGGCCAAGAAGAGGTCTAGGC
EW739504       <-- GGAGCGGCGTGATCGCCGTAGTGAAAGTTTGGCCAAGAAGAGGTCTAGGC
EX759451       <-- GGAGCAGCGTGTTCGCCGTAGTGAAAGTTTGGCCAAGAAGAGGTCTAGGC
EY915849       --> ..................................................
EX764995       --> ..................................................
FY434890       --> GGAGCAGCGTGATCGCCGTAGTGAAAGTTTGGCCAAGAAGAGGTCTAGGC
FY430188       --> GGAGCAGCGTGATCGCCGTAGTGAAAGTT-GGCCAAGAAGAGGTCTAGGC
FY436608       --> ..................................................
FY439614       --> GGAGCAGCGTGATCGCCGTAGTGAAAGTTTGGCCAAGAAGAGGTCTAGGC
FY436080       --> GGAGCAGCGTGATCGCCGTAGTGAAAGTTTGGCCAAGAAGAGGTCTAGGC
FY434645       --> GGAGCAGCGTGATCGCCGTAGTGAAAGTTTGGCCAAGAAGAGGTCTAGGC
EX748052       --> GGAGCAGCGTGATCGCCGTAGTGAAAGTTTGGCCAAGAAGAGGTCTAGGC
EW735407       --> GGAGCGGCGTGATCGCCGTAGTGAAAGTTTGGCCAAGAAGAGGTCTAGGC

               801    -    851
UN09478        --> TCTCTTCCGCTGCCGCTAAGCCCGTTGCTGCTTAAAA--CCATTCCAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768811       <-- TCTCTTCCGCTGCCGCTAAGCCCGTTGCTGCTTAAAA--CCATTCCAATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911618       <-- TCTCTTCCGCTGCCGCTAAGCCCGTTGCTGCTTAAAAACCCATTCCAATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX752104       <-- TTTCTTCCGCTGCCGCTAAGCCCGTTGCTGCTTAAAAACCCATTCCAATC  Raphanus raphanistrum subsp. maritimus
EW739504       <-- TTTCTTCCGCTGCCGCTAATCCCGTTGCTGCTTAAAAACCCATTCCAATC  Raphanus sativus cv Rat-Tail Radish #3870
EX759451       <-- TCTCTTCCGCTGCCGCTAAGCCCGTTG.......................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY915849       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX764995       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY434890       --> TCTCTTCCGCTGCCGCTAAGCCCGTTGCTGCTTAAAA--CCATTCCAATC  Raphanus sativus cv GSK3-1
FY430188       --> TCTCTTCCGCTGCCGCTAAGCCCGTTGCTGCTTAAAA--CCATTCCAATC  Raphanus sativus cv GSK3-1
FY436608       --> ..................................................  Raphanus sativus cv GSK3-1
FY439614       --> TCTCTTCCGCTGCCGCTAAGCCCGTTGCTGCTTAAAA--CCATTCCAATC  Raphanus sativus cv GSK3-1
FY436080       --> TCTCTTCCGCTGCCGCTAAGCCCGTTGCTGCTTAAAA--CCATTCCAATC  Raphanus sativus cv GSK3-1
FY434645       --> TCTCTTCCGCTGCCGCTAAGCCCGTTGCTGCTTAAAA--CCATTCCAATC  Raphanus sativus cv GSK3-1
EX748052       --> TCTCTTCCGCTGCCGCTAAGCCCGTTGCTGCTTAAAAACCCATTCCAATC  Raphanus raphanistrum subsp. maritimus
EW735407       --> TCTCTTCCGCTGCCGCTAATCCCGTTGCTGCTTAAAAACCCATTCCAATC  Raphanus sativus cv Rat-Tail Radish #3870

               851    -    901
UN09478        --> ATCAAAAGACTTCGTTCTCTCTCT-TTAGTCTGTTTCTGCGTCGTATTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768811       <-- ATCAAAAGACTTCGTTCTCTCTCTCTTAGTCTGTTTCTGCGTCGTATTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911618       <-- ATCAAAAGACTTCGTTCTCTCTCT-TT-GTCTGTTTCTGCGTCGTATTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX752104       <-- ATCAAAAGACTTCGTTCTCTCTCT-TT-GTCTGTTTCTGCGTCGTATTTG  Raphanus raphanistrum subsp. maritimus
EW739504       <-- ATCAAAAGACTTCGTTCTCTCTCT-TT-GTCTGTTTTTGCGTCGTATTTG  Raphanus sativus cv Rat-Tail Radish #3870
EX759451       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY915849       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX764995       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY434890       --> ATCAAAAGACTTCGTTCTCTCTCT-T-AGTCTGTTTCTGCGTCGTATTTG  Raphanus sativus cv GSK3-1
FY430188       --> ATCAAAAGACTTCGTTCTCTCTCT-T-AGTCTGTTTCTGCGTCGTATTTG  Raphanus sativus cv GSK3-1
FY436608       --> ..................................................  Raphanus sativus cv GSK3-1
FY439614       --> ATCAAAAGACTTCGTTCTCTCTCT-T-AGTCTGTTTCTGCGTCGTATTTG  Raphanus sativus cv GSK3-1
FY436080       --> AT................................................  Raphanus sativus cv GSK3-1
FY434645       --> ATCAAAAGACTTCGTTCTCTCTCT-T-AGTCTGTTTCTGCGTCGTATTTG  Raphanus sativus cv GSK3-1
EX748052       --> ATCAAAAGACTTCGTTCTCTCTCT-TT-GTCTGTTTCTGCGTCGTATTTG  Raphanus raphanistrum subsp. maritimus
EW735407       --> ATCAAAAGACTTCGTTCTCTCTCT-TT-GTCTGTTTCTGCGTCGTATTTG  Raphanus sativus cv Rat-Tail Radish #3870

               901    -    951
UN09478        --> GACATGTAAACTCCGTTTTGAACGTCTTTTTTTTTTTGGTTTCTGCTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768811       <-- GACATGTAAACTCCGTTTTGAACGTCTTTTTTTTTTTGGTTTCTGCTTTG
EY911618       <-- GACATGTAAACTCCGTTTTGAACGTCTTTTTTTTTT-GGTTTCTGCTTTG
EX752104       <-- GACATGTAAACTCCGTTTTGAACGTCTTTTTTTTTTTGGTTTCTGCTTTG
EW739504       <-- GACATGTAAACTCCGTTTTGAACGTCTTTTTTTTTTTGGTTTCTGCTTTG
EX759451       <-- ..................................................
EY915849       --> ..................................................
EX764995       --> ..................................................
FY434890       --> GACATGTAAACTCCGTTTTGAACGTC........................
FY430188       --> GACATGTAAACTC.....................................
FY436608       --> ..................................................
FY439614       --> GACATGTAAACTCCGTTTTGAACGTCTTTT....................
FY436080       --> ..................................................
FY434645       --> GACATGTAAACTCCGTTTTGAACGTCTTTTTCTTTTTGGTTTCTGCTTTG
EX748052       --> GACATGTAAACTCCGTTTTGAACGTCTTTTTTTTTTTGGTTTCTGCTTTG
EW735407       --> GACATGTAAACTCCGTTTTGAACGTCTTTTTTTTTTTGGTTTCTGCTTTG

               951    -   1001
UN09478        --> TCTTAGCTCTTTAACCTTTCTATTATATTAAAGTTTTTGAACTTGTTTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768811       <-- TCTTAGCTCTTTAACCTTTCTATTATATTAAAGTTTTTGAACTTGTTTGC
EY911618       <-- TCTTAGCTCTTTAACCTTTCTATTATATTAAAGTTTTTGAACTTGTTTGC
EX752104       <-- TCTTAGCTCTTTAACCTTTCTATTATATTAAAGTTTTTGAACTTGTTTGC
EW739504       <-- TCTTAGCTCTTTAACCTTTCTATTATATTAAAGT................
EX759451       <-- ..................................................
EY915849       --> ..................................................
EX764995       --> ..................................................
FY434890       --> ..................................................
FY430188       --> ..................................................
FY436608       --> ..................................................
FY439614       --> ..................................................
FY436080       --> ..................................................
FY434645       --> TCTTAGCTCTTAAACCTTTCTATTATATTAAAGTTTTTGAACTTGTTTGC
EX748052       --> TCTTAGCTCTTTAACCTTTCTATTATATTAAAGTTTTTGAACTTGTTTGC
EW735407       --> TCTTAGCTCTTTAACCTTTCTATTATATTAAAGTTTTTGAACTTGTTTGC

               1001   -   1051
UN09478        --> TC
                   ~~
EX768811       <-- TC
EY911618       <-- cc
EX752104       <-- cc
EW739504       <-- ..
EX759451       <-- ..
EY915849       --> ..
EX764995       --> ..
FY434890       --> ..
FY430188       --> ..
FY436608       --> ..
FY439614       --> ..
FY436080       --> ..
FY434645       --> TC
EX748052       --> cc
EW735407       --> ..