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Alignment for radish unigene UN09535

               1      -     51
UN09535        --> GGGTCCTCCACAATACAGAACAGGGCCGTGAAGTCAGAGAGACAGAGGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544384       <-- ..................................................
FD977503       <-- ..................................................
FD552583       <-- ..................................................
FD575533       <-- ..................................................
FD960576       <-- ..................................................
EV548767       --> GGGTCCTCCACAATACAGAACAGGGCCGTGAAGTCAGAGAGACAGAGGGA
FD981809       --> ..................................................
FD946389       --> ..................................................
FD571760       --> ..................................................
FD556243       --> ..................................................
FD533133       --> ..................................................
EV567365       --> ..................................................

               51     -    101
UN09535        --> GAGAGACACACAAAGAGAATTTCGCCGGAGAAATTAGCGGTTACGGTGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544384       <-- ..................................................
FD977503       <-- ..................................................
FD552583       <-- ..................................................
FD575533       <-- ..................................................
FD960576       <-- ..................................................
EV548767       --> GAGAGACACACAAAGAGAATTTCGCCGGAGAAATTAGCGGTTACGGTGGT
FD981809       --> ..................................................
FD946389       --> ..................................................
FD571760       --> ..................................................
FD556243       --> ..................................................
FD533133       --> ..................................................
EV567365       --> ..................................................

               101    -    151
UN09535        --> CTTACTCAGTAACAAGACATCAGAATCTCCAGTCCCTTCTTCCCCCAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544384       <-- ..................................................
FD977503       <-- ..................................................
FD552583       <-- ..................................................
FD575533       <-- ..................................................
FD960576       <-- ..................................................
EV548767       --> CTTACTCAGTAACAAGACATCAGAATCTCCAGTCCCTTCTTCCCCCAGGA
FD981809       --> ..................................................
FD946389       --> ..................................................
FD571760       --> ..................................................
FD556243       --> ..................................................
FD533133       --> ..................................................
EV567365       --> ..................................................

               151    -    201
UN09535        --> AAAATCATCGGTCTCTTATTATACAATCGGAGAAAGAAGCTCGAGAAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544384       <-- ..................................................
FD977503       <-- ..................................................
FD552583       <-- ..................................................
FD575533       <-- ..................................................
FD960576       <-- ..................................................
EV548767       --> AAAATCATCGGTCTCTTATTATACAATCGGAGAAAGAAGCTCGAGAAATG
FD981809       --> ..................................................
FD946389       --> ..................................................
FD571760       --> ..................................................
FD556243       --> ..................................................
FD533133       --> ..................................................
EV567365       --> ..................................................

               201    -    251
UN09535        --> TCGTCGTTAGAACAAGAAATGTTCTTACAGTGGGGAAACAAGAAGAGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544384       <-- ................................................AT
FD977503       <-- ..................................................
FD552583       <-- ..................................................
FD575533       <-- ..................................................
FD960576       <-- ..................................................
EV548767       --> TCGTCGTTAGAACAAGAAATGTTCTTACAGTGGGGAAACAAGAAGAGAAT
FD981809       --> ..................................................
FD946389       --> ..................................................
FD571760       --> ..................................................
FD556243       --> ..................................................
FD533133       --> ..................................................
EV567365       --> ..................................................

               251    -    301
UN09535        --> GAGACGCCTAAGAGCCGCCAACAAGGACAAACACATCTCACGCCGCGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544384       <-- GAGACGCCTAAGAGCCGCCAACAAGGACAAACACATCTCACGCCGCGAAT
FD977503       <-- ..................................................
FD552583       <-- ..................................................
FD575533       <-- ..................................................
FD960576       <-- ..................................................
EV548767       --> GAGACGCCTAAGAGCCGCCAACAAGGACAAACACATCTCACGCCGCGAAT
FD981809       --> ..................................................
FD946389       --> ..................................................
FD571760       --> ..................................................
FD556243       --> ..................................................
FD533133       --> ..................................................
EV567365       --> ..................................................

               301    -    351
UN09535        --> CTAATTCCTCATCAGCTCCTCAATACTCAGATCTGGAGGACTAGCAGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544384       <-- CTAATTCCTCATCAGCTCCTCAATACTCAGATCTGGAGGACTAGCAGAGA
FD977503       <-- ..................................................
FD552583       <-- ..................................................
FD575533       <-- ..................................................
FD960576       <-- ..................................................
EV548767       --> CTAATTCCTCATCAGCTCCTCAATACTCAGATCTGGAGGACTAGCAGAGA
FD981809       --> ..................................................
FD946389       --> ..................................................
FD571760       --> ..................................................
FD556243       --> ..................................................
FD533133       --> ..................................................
EV567365       --> ..................................................

               351    -    401
UN09535        --> AAGAGAAAGAGAAAGAGAAAGAGGAGAGGTATTACACTACGAGAGCTGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544384       <-- AAGAGAAAGAGAAAGAGAAAGAGGAGAGGTATTACACTACGAGAGCTGTA
FD977503       <-- ..................................................
FD552583       <-- ..................................................
FD575533       <-- ..................................................
FD960576       <-- ..................................................
EV548767       --> AAGAGAAAGAGAAAGAGAAAGAGGAGAGGTATTACACTACGAGAGCTGTA
FD981809       --> ..................................................
FD946389       --> ..................................................
FD571760       --> ..................................................
FD556243       --> ..................................................
FD533133       --> ..................................................
EV567365       --> ..................................................

               401    -    451
UN09535        --> GTTGATACAATTGGGAAAGCTTGCTTATTAGATGGAGAAGACAGCAATAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544384       <-- GTTGATACAATTGGGAAAGCTTGCTTATTAGATGGAGAAGACAGCAATAG
FD977503       <-- ..................................................
FD552583       <-- ..................................................
FD575533       <-- ..................................................
FD960576       <-- ..................................................
EV548767       --> GTTGATACAATTGGGAAAGCTTGCTTATTAGATGGAGAAGACAGCAATAG
FD981809       --> ..................................................
FD946389       --> ...........................................gggatat
FD571760       --> ..................................................
FD556243       --> ..................................................
FD533133       --> ..................................................
EV567365       --> ..................................................

               451    -    501
UN09535        --> CAAGGGAGAGGAGCTTCGTTGCGCAAATCGGTGAAGAGAGAGATAGAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544384       <-- CAAGGGAGAGGAGCTTCGTTGCGCAAATCGGTGAAGAGAGAGATAGAGAG
FD977503       <-- .........GGAGCTTCGTTGCGCAAATCGGTGAAGAGAGAGATAGAGAG
FD552583       <-- ...........gtgggtgaagagagagatcgcGAAGAGAGAGATAGAG--
FD575533       <-- .........................................GATAGAGAG
FD960576       <-- ..................................................
EV548767       --> CAAGGGAGAGGAGCTTCGTTGCGCAAATCGGTGAAGAGAGAGATAGAGAG
FD981809       --> .........GGAGCTTCGTTGCGCAAATCGGTGAAGAGAGAGATAGAGAG
FD946389       --> cgaagactagcAGCTTCGTTGCGCAAATCGGTGAAGAGAGAGATAGAGAG
FD571760       --> ..............gggGTTGCGCAAATCGGTGAAGAGAGAGATAGAGAG
FD556243       --> ...........gtgggtgaagagagagatcgcGAAGAGAGAGATAGAGA-
FD533133       --> ..................................................
EV567365       --> ..................................................

               501    -    551
UN09535        --> AAGATGTCTTCGTTTCTAAAAACCTTCCTCGACCCAAA-GAAGAACTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544384       <-- AAGATGTCTTCGTTTCTAAAAACCTTCCTCGACCCAAA-GAAGAACTTCC
FD977503       <-- AAGATGTCTTCGTTTCTAAAAACCTTCCTCGACCCAAA-GAAGAACTTCC
FD552583       <-- AAGATGTCTTCGTTTCTAAAAACCTTCCTCGATCCAAA-GAAGAACTTCC
FD575533       <-- AAGATGTCTTCGTTTCTAAAAAC-TTCCTCGACCCAAAAAAAGAACTTCC
FD960576       <-- ..................................................
EV548767       --> AAGATGTCTTCGTTTCTAAAAACCTTCCTCGACCCAAA-GAAGAACTTCC
FD981809       --> AAGATGTCTTCGTTTCTAAAAACCTTCCTCGACCCAAA-GAAGAACTTCC
FD946389       --> AAGATGTCTTCGTTTCTAAAAACCTTCCTCGACCCAAA-GAAGAACTTCC
FD571760       --> AAGATGTCTTCGTTTCTAAAAACCTTCCTCGACCCAAA-GAAGAACTTCC
FD556243       --> -AGATGTCTTCGTTTCTAAAAACCTTCCTCGATCCAAA-GAAGAACTTCC
FD533133       --> ..................................................
EV567365       --> ..................................................

               551    -    601
UN09535        --> TCGCTCGTATGCACATGAAAGCCGTCTCCACTCGCCTCCGTAGATACGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544384       <-- TCGCTCGTATGCACATGAAAGCCGTCTCCACTCGCCTCCGTAGATACGGT
FD977503       <-- TCGCTCGTATGCACATGAAAGCCGTCTCCACTCGCCTCCGTAGATACGGT
FD552583       <-- TCGC--TTATGCACATGAAAGCCGTCTCCACTCGCCTCCGTAGATACGGT
FD575533       <-- TCGCTCGTATGCACATGAAAGCCGTCTCCACTCGCCTCCGTAGATACGGT
FD960576       <-- .........TGCACATGAAAGCCGTCTCCACTCGCCTCCGTAGATACGGT
EV548767       --> TCGCTCGTATGCACA...................................
FD981809       --> TCGCTCGTATGCACATGAAAGCCGTCTCCACTCGCCTCCGTAGATACGGT
FD946389       --> TCGCTCGTATGCACATGAAAGCCGTCTCCACTCGCCTCCGTAGATACGGT
FD571760       --> TCGCTCGTATGCACATGAAAGCCGTCTCCACTCGCCTCCGTAGATACGGT
FD556243       --> TCGCT--TATGCACATGAAAGCCGTCTCCACTCGCCTCCGTAGATACGGT
FD533133       --> ..................................................
EV567365       --> ..................................................

               601    -    651
UN09535        --> CTGAGGTACGACGACACGTACGATCAGTATTACCACATGGACATCAAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544384       <-- CTGAGGTACGACGACACGTACGATCAGTATTACCACATGGACATCAAAGA
FD977503       <-- CTGAGGTACGACGACACGTACGATCAGTATTACCACATGGACATCAAAGA
FD552583       <-- CTGAGGTACGATGACACGTACGATCAGTATTACCACATGGACATCAAAGA
FD575533       <-- CTGAGGTACGACGACACGTACGATCAGTATTACCACATGGACATCAAAGA
FD960576       <-- CTGAGGTACGATGACACGTACGATCAGTATTACCACATGGACATCAAAGA
EV548767       --> ..................................................
FD981809       --> CTGAGGTACGACGACACGTACGATCAGTATTACCACATGGACATCAAAGA
FD946389       --> CTGAGGTACGACGACACGTACGATCAGTATTACCACATGGACATCAAAGA
FD571760       --> CTGAGGTACGACGACACGTACGATCAGTATTACCACATGGACATCAAAGA
FD556243       --> CTGAGGTACGATGACACGTACGATCAGTATTACCACATGGACATCAAAGA
FD533133       --> .................................................g
EV567365       --> ..................................................

               651    -    701
UN09535        --> GGCCCTGAACAGATTGCCCAGGGAGGTCGTCGACGCTCGTAACCAGCGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544384       <-- GGCCCTGAACAGATTGCCCAGGGAGGTCGTCGACGCTCGTAACCAGCGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD977503       <-- GGCCCTGAACAGATTGCCCAGGGAGGTCGTCGACGCTCGTAACCAGCGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552583       <-- GGCTCTGAACAGATTGCCCAGGGAGGTCGTCGACGCTCGTAACCAGCGTC  Raphanus raphanistrum subsp. landra
FD575533       <-- GGCCCTGAACAGATTGCCCAGGGAGGTCGTCGACGCTCGTAACCAGCGTC  Raphanus sativus cv Early Scarlet Globe
FD960576       <-- GGCTCTGAACAGATTGCCCAGGGAGGTCGTCGACGCTCGTAACCAGCGTC  Raphanus raphanistrum subsp. maritimus
EV548767       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981809       --> GGCCCTGAACAGATTGCCCAGGGAGGTCGTCGACGCTCGTAACCAGCGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD946389       --> GGCCCTGAACAGATTGCCCAGGGAGGTCGTCGACGCTCGTAACCAGCGTC  Raphanus sativus cv Early Scarlet Globe
FD571760       --> GGCCCTGAACAGATTGCCCAGGGAGGTCGTCGACGCTCGTAACCAGCGTC  Raphanus sativus cv Early Scarlet Globe
FD556243       --> GGCTCTGAACAGATTGCCCAGGGAGGTCGTCGACGCTCGTAACCAGCGTC  Raphanus raphanistrum subsp. landra
FD533133       --> GGCTCTGAACAGATTGCCCAGGGAGGTCGTCGACGCTCGTAACCAGCGTC  Raphanus raphanistrum subsp. maritimus
EV567365       --> ..................................................  Raphanus raphanistrum subsp. landra

               701    -    751
UN09535        --> TCAAGCGTGCCATGGATCTCTCCATGAAGCACGAGTATCTTTCCGAGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544384       <-- TCAAGCGTGCCATGGATCTCTCCATGAAGCACGAGTATCTTTCCGAGGAA
FD977503       <-- TCAAGCGTGCCATGGATCTCTCCATGAAGCACGAGTATCTTTCCGAGGAA
FD552583       <-- TCAAGCGTGCCATGGATCTCTCCATGAAGCACGAGTATCTTTCCGAGGAA
FD575533       <-- TCAAGCGTGCCATGGATCTCTCCATGAAGCACGAGTATCTTTCCGAGGAA
FD960576       <-- TCAAGCGTGCCATGGATCTCTCCATGAAGCACGAGTATCTTTCCGAGGAA
EV548767       --> ..................................................
FD981809       --> TCAAGCGTGCCATGGATCTCTCCATGAAGCACGAGTATCTTTCCGAGGAA
FD946389       --> TCAAGCGTGCCATGGATCTCTCCATGAAGCACGAGTATCTTTCCGAGGAA
FD571760       --> TCAAGCGTGCCATGGATCTCTCCATGAAGCACGAGTATCTTTCCGAGGAA
FD556243       --> TCAAGCGTGCCATGGATCTCTCCATGAAGCACGAGTATCTTTCCGAGGAA
FD533133       --> TCAAGCGTGCCATGGATCTCTCCATGAAGCACGAGTATCTTTCCGAGGAA
EV567365       --> ...................CTCCATGAAGCACGAGTATCTTTCCGAGGAA

               751    -    801
UN09535        --> CTTCAGGCGTTGCAGACTCCATTCCGTAGCTACCTTCAGGAGATGCTGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544384       <-- CTTCAGGCGTTGCAGACTCCATTCCGTAGCTACCTTCAGGAGATGCTGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD977503       <-- CTTCAGGCGTTGCAGACTCCATTCCGTAGCTACCTTCAGGAGATGCTGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552583       <-- CTTCAGGCGTTGCAGACTCCATTCCGTAGCTACCTTCAGGAGATGCTAGC  Raphanus raphanistrum subsp. landra
FD575533       <-- CTTCAGGCGTTGCAGACTCCATTCCGTAGCTACCTTCAGGAGATGCTGGC  Raphanus sativus cv Early Scarlet Globe
FD960576       <-- CTTCAGGCGTTGCAGACTCCATTCCGTAGCTACCTTCAGGAGATGCTAGC  Raphanus raphanistrum subsp. maritimus
EV548767       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD981809       --> CTTCAGGCGTTGCAGACTCCATTCCGTAGCTACCTTCAGGAGATGCTGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD946389       --> CTTCAGGCGTTGCAGACTCCATTCCGTAGCTACCTTCAGGAGATGCTGGC  Raphanus sativus cv Early Scarlet Globe
FD571760       --> CTTCAGGCGTTGCAGACTCCATTCCGTAGCTACCTTCAGGAGATGCTGGC  Raphanus sativus cv Early Scarlet Globe
FD556243       --> CTTCAGGCGTTGCAGACTCCATTCCGTAGCTACCTTCAGGAGATGCTAGC  Raphanus raphanistrum subsp. landra
FD533133       --> CTTCAGGCGTTGCAGACTCCATTCCGTAGCTACCTTCAGGAGATGCTAGC  Raphanus raphanistrum subsp. maritimus
EV567365       --> CTTCAGGCGTTGCAGACTCCATTCCGTAGCTACCTTCAGGAGATGCTAGC  Raphanus raphanistrum subsp. landra

               801    -    851
UN09535        --> TCTCGTTGAGAGAGAAAGAAAGGAACGTGAAGCCTTGGGAGCTTTGCCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544384       <-- TCTCGTTGAGAGAGAAAGAAAGGAACGTGAAGCCTTGGGAGCTTTGCCAC
FD977503       <-- TCTCGTTGAGAGAGAAAGAAAGGAACGTGAAGCCTTGGGAGCTTTGCCAC
FD552583       <-- TCTCGTTGAGAGAGAAAGAAAGGAACGTGAAGCCTTGGGAGCTTTGCCAC
FD575533       <-- TCTCGTTGAGAGAGAAAGAAAGGAACGTGAAGCCTTGGGAGCTTTACCAC
FD960576       <-- TCTCGTTGAGAGAGAAAGAAAGGAACGTGAAGCCTTGGGAGCTTTGCCAC
EV548767       --> ..................................................
FD981809       --> TCTCGTTGAGAGAGAAAGAAAGGAACGTGAAGCCTTGGGAGCTTTGCCAC
FD946389       --> TCTCGTTGAGAGAGAAAGAAAGGAACGTGAAGCCTTGGGAGCTTTACCAC
FD571760       --> TCTCGTTGAGAGAGAAAGAAAGGAACGTGAAGCCTTGGGAGCTTTACCAC
FD556243       --> TCTCGTTGAGAGAGAAAGAAAGGAACGTGAAGCCTTGGGAGCTTTGCCAC
FD533133       --> TCTCGTTGAGAGAGAAAGAAAGGAACGTGAAGCCTTGGGAGCTTTGCCAC
EV567365       --> TCTCGTTGAGAGAGAAAGAAAGGAACGTGAAGCCTTGGGAGCTTTGCCAC

               851    -    901
UN09535        --> TCTACCAGCGCACTCTTCCTTAAGCATATTTTCCCACCCTTTTCTTATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544384       <-- TCTACCAGCGCACTCTTCCTTAAGCATATTTTCCCACCCTTTTCTTATGA
FD977503       <-- TCTACCAGCGCACTCTTCCTTAAGCATATTTTCCCACCCTTTTCTTATGA
FD552583       <-- TCTACCAGCGCACTCTTCCTTAAGCATATTTTCCCACCCTTTTCTTATGA
FD575533       <-- TCTACCAGCGCACTCTTCCTTGAGCATATTTTCCCACTCTTTTCTTATGA
FD960576       <-- TCTACCAGCGCACTCTTCCTTAAGCATATTTTCCCACCCTTTTCTTATGA
EV548767       --> ..................................................
FD981809       --> TCTACCAGCGCACTCTTCCTTAAGCATATTTTCCCACCCTTTTCTTATGA
FD946389       --> TCTACCAGCGCACTCTTCCTTGAGCATATTTTCCCACCCTTT-CTTATGA
FD571760       --> TCTACCAGCGCACTCTTCCTTGAGCATATTTTCCCACTCTTTTCTTATGA
FD556243       --> TCTACCAGCGCACTCTTCCTTAAGCATATTTTCCCACCCTTTTCTTATGA
FD533133       --> TCTACCAGCGCACTCTTCCTTAAGCATATTTTCCCACCCTTTTCTTATGA
EV567365       --> TCTACCAGCGCACTCTTCCTTAAGCATATTTTCCCACCCTTTTCTTATGA

               901    -    951
UN09535        --> TGATGATCAACTCTTCTTCTCTGCATAAAACTCATCTCCAAATGGATGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544384       <-- TGATGATCAACTCTTCTTCTCTGCATAAAACTCATCTCCAAATGGATGAC
FD977503       <-- TGATGATCAACTCTTCTTCTCTGCATAAAACTCATCTCCAAATGGATGAC
FD552583       <-- TGATGATCAACTCTTCTTCTCTGCATAAAACTCATCTCCAAATGGATGAC
FD575533       <-- TGATGATCAACTCTTCTTCTCTGCATAAAACTCATCTCCAAATGGATGAC
FD960576       <-- TGATGATCAACTCTTCTTCTCTGCATAAAACTCATCTCCAAATGGATGAC
EV548767       --> ..................................................
FD981809       --> TGATGATCAACTCTTCTTCTCTGCATAAAACTCATCTCCAAATGGATGAC
FD946389       --> TGATGATCAACTCTTCTTCTCTGCATAAAACTCATCTCCAAATAGATGAC
FD571760       --> TGATGATCAACTCTTCTTCTCTGCATAAAACTCATCTCCAAATGGATGAC
FD556243       --> TGATGATCAACTCTTCTTCTCTGCATAAAACTCATCTCCAAATGGATGAC
FD533133       --> TGATGATCAACTCTTCTTCTCTGCATAAAACTCATCTCCAAATGGATGAC
EV567365       --> TGATGATCAACTCTTCTTCTCTGCATAAAACTCATCTCCAAATGGATGAC

               951    -   1001
UN09535        --> ATTTATATTTTCGAAATCATATTCTGAACCTGAGCTATTTACTCTCTTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544384       <-- ATTTATATTTTCGAAATCATATTCTGAACCTGAGCTGTTTACTCTCTTAA
FD977503       <-- ATTTATATTTTCGAAATCATATTCTGAACCTGAGCTGTTTACTCTCTTAA
FD552583       <-- ATTTATATTTTCGAAATCATATTCTGAACCTGAGCTATTTACTCTCTTAA
FD575533       <-- ATTTATATTTTCGAAATCATATTCTGAACCTGAGCTATTTACTCTCTTAA
FD960576       <-- ATTTATATTTTCGAAATCATATTCTGAACCTGAGCTATTTACTCTCTTAA
EV548767       --> ..................................................
FD981809       --> ATTTATATTTTCGAAATCATATTCTGAACCTGAGCTGTTTACTCTCTTAA
FD946389       --> ATTTATATTTTCGAAATCATATTCTGAACCTGAGCTATTTACTCTCTTAA
FD571760       --> ATTTATATTTTCGAAATCATATTCTGAACCTGAGCTATTTACTCTCTTAA
FD556243       --> ATTTATATTTTCGAAATCATATTCTGAACCTGAGCTATTTACTCTCTTAA
FD533133       --> ATTTATATTTTCGAAATCATATTCTGAACCTGAGCTATTTACTCTCTTAA
EV567365       --> ATTTATATTTTCGAAATCATATTCTGAACCTGAGCTATTTACTCTCTTAA

               1001   -   1051
UN09535        --> AATGCATAAGTCTTGTAATAGTTTCTCTAAACCTGGGATATATTACTCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544384       <-- AATGCATAAGTCTTGTAATAGTTTCTCTAAACCTGGGATATATTACTCGT
FD977503       <-- AATGCATAAGTCTTGTAATAGTTTCTCTAAACCTGGGATATGTTACTCGT
FD552583       <-- AATGCATAAGTCTTGTAATAGTTTCTCTAAACCTGGGATATATTACTCGT
FD575533       <-- AATGCATAAGTCTTGTAATAGTTTCTCTAAACCTGGGATATATTACTCGT
FD960576       <-- AATGCATAAGTCTTGTAATAGTTTCTCTAAACCTGGGATATATTACTCGT
EV548767       --> ..................................................
FD981809       --> AATGCATAAGTCTTGTAATAGTTTCTCTAAACCTGGGATATGTTACTCGT
FD946389       --> A.................................................
FD571760       --> AATGCATAAGTCTTGTAATAGTTTCTCTAAACCTGGGATATATTACTCGT
FD556243       --> AATGCATAAGTCTTGTAATAGTTTCTCTAAACCTGGGATATATTACTCGT
FD533133       --> AATGCATAAGTCTTGTAATAGTTTCTCTAAACCTGGGATATATTACTCGT
EV567365       --> AATGCATAAGTCTTGTAATAGTTTCTCTAAACCTGGGATATATTACTCGT

               1051   -   1101
UN09535        --> CTGTTGTTACATTTTCATGTTTGCTGGTTTGAATAAAATCGAAACACAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544384       <-- CTGTTGTTACATTTTCATGTTTGCTGGTTTGAATAAAATCGAAACACAAG
FD977503       <-- CTGTTGTTACATTTTCATGTTTGCTGGTTTGAATAAAATCGAAACACAAG
FD552583       <-- CTGTTGTTACATTTTCATGTTTGCTGGTTTGAATAAAATCGAAACACAAG
FD575533       <-- CTGTTGTTACATTTTCATGTTTGCTGGTTTGAATAAAATCGAAACACAAG
FD960576       <-- CTGTTGTTACATTTTCATGTTTGCTGGTTTGAATAAAATCGAAACACAAG
EV548767       --> ..................................................
FD981809       --> CTGTTGTTACATTTTCATGTTTGCTGGTTTGAATAAAAT...........
FD946389       --> ..................................................
FD571760       --> CTGTTGTTACATTTTCATGTTTGCTGGTTTGAATAAAATCGAAACACAAG
FD556243       --> CTGTTGTTACATTTTCATGTTTGCTGGTTTGAATAAAATCGAAACACAAG
FD533133       --> CTGTTGTTACATTTTCATGTTTGCTGGTTTGAATAAAt............
EV567365       --> CTGTTGTTACATTTTCATGTTTGCTGGTTTGAATAAAtcg..........

               1101   -   1151
UN09535        --> TCTGGTTTTCATTTTTTTGCAGTTTGCTTCGTTGTTATAAACAGTGAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544384       <-- TCTGGTTTTaaaag....................................
FD977503       <-- TCTGGTTTTC........................................
FD552583       <-- TCTGGTTTTCAgt.....................................
FD575533       <-- TCTGGTTTTCATTTTTTTGCAGTTTGCTTCGTTGTTATAAACAGTGAAAG
FD960576       <-- TCTGGTTTTCATTT....................................
EV548767       --> ..................................................
FD981809       --> ..................................................
FD946389       --> ..................................................
FD571760       --> TCTGGTTTTCATTTTTTTGCAGTTTGCTTCGTTGTTATAAACAGT.....
FD556243       --> TCTGGTTTTCAgt.....................................
FD533133       --> ..................................................
EV567365       --> ..................................................

               1151   -   1201
UN09535        --> ACATCCACATACATATTATGAGTTTTAATTTGCCATTTGGAGCATATCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544384       <-- ..................................................
FD977503       <-- ..................................................
FD552583       <-- ..................................................
FD575533       <-- ACATCCACATACATATTATGAGTTTTAATTTGCCATTTGGAGCATATCGA
FD960576       <-- ..................................................
EV548767       --> ..................................................
FD981809       --> ..................................................
FD946389       --> ..................................................
FD571760       --> ..................................................
FD556243       --> ..................................................
FD533133       --> ..................................................
EV567365       --> ..................................................

               1201   -   1251
UN09535        --> ACTTGGGATATGAAGCTTGGGGATTTCAAAAACAAGATAAATGTGCAGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544384       <-- ..................................................
FD977503       <-- ..................................................
FD552583       <-- ..................................................
FD575533       <-- ACTTGGGATATGAAGCTTGGGGATTTCAAAAACAAGATAAATGTGCAGTA
FD960576       <-- ..................................................
EV548767       --> ..................................................
FD981809       --> ..................................................
FD946389       --> ..................................................
FD571760       --> ..................................................
FD556243       --> ..................................................
FD533133       --> ..................................................
EV567365       --> ..................................................

               1251   -   1301
UN09535        --> TATATATTGTCAAAGGATATAAATCATTTATATTACAGTTACCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544384       <-- ............................................
FD977503       <-- ............................................
FD552583       <-- ............................................
FD575533       <-- TATATATTGTCAAAGGATATAAATCATTTATATTACAGTTACCC
FD960576       <-- ............................................
EV548767       --> ............................................
FD981809       --> ............................................
FD946389       --> ............................................
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