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Alignment for radish unigene UN09575

               1      -     51
UN09575        --> GGGTCCCACAGACACACAAAAAAAACCCTAAAACCACTTCTCCTCGCAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443546       <-- ..................................................
EV572598       <-- ..................................................
EY911057       <-- ..................................................
FD983548       <-- ..................................................
FD943939       <-- ..................................................
EY921496       --> GGGTCCCACAGACACACAAAAAAAACCCTAAAACCACTTCTCCTCGCAGC
FY445824       --> .................................CCACTTCTCCTCGAAGC
FY444572       --> ..................................................
FD987502       --> ..................................................
EV567717       --> ..................................................

               51     -    101
UN09575        --> TGCCCCCAATGTCGAAGAAGCGTAACCCTCTCGAAGATCCACCCGCCGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443546       <-- ..................................................
EV572598       <-- ..................................................
EY911057       <-- ..................................................
FD983548       <-- ..................................................
FD943939       <-- ..................................................
EY921496       --> TGCCCCCAATGTCGAAGAAGCGTAACCCTCTCGAAGATCCACCCGCCGCA
FY445824       --> TGCCCCCAATGTCGAAGAAGCGTAACCCTCTCGAAGATCCACCCGCCGCA
FY444572       --> ..........................CCTCTCGAAGATCCACCCGCCGCA
FD987502       --> ..................................................
EV567717       --> ..................................................

               101    -    151
UN09575        --> TCCTCAAGCGACGACGAAGAAGTCGAGTCTTCCGCCGAGGAAGAAGAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443546       <-- ..................................................
EV572598       <-- ..................................................
EY911057       <-- ..................................................
FD983548       <-- ..................................................
FD943939       <-- ..................................................
EY921496       --> TCCTCAAGCGACGACGAAGAAGTCGAGTCTTCCGCCGAGGAAGAAGAGGA
FY445824       --> TCCTCAAGCGACGACGAAGAAGTCGAGTCTTCCGCCGAGGAAGAAGAAGA
FY444572       --> TCCTCAAGCGACGACGAAGAAGTCGAGTCTTCCGCCGAGGAAGAAGAAGA
FD987502       --> ..................................................
EV567717       --> ..................................................

               151    -    201
UN09575        --> AGAAGAGGACGATGACTCCTCATCCGAAGAAGACGCTCCCGTCAAACCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443546       <-- ..................................................
EV572598       <-- ..................................................
EY911057       <-- ..................................................
FD983548       <-- ..................................................
FD943939       <-- ..................................................
EY921496       --> AGAAGAGGACGACGACTCCTCATCCGAAGAAGACGCTCCCGTCAAACCTC
FY445824       --> AGAAGAGGACGATGACTCCTCATCCGAAGAAGACGCTCCCGTCAAACCTC
FY444572       --> AGAAGAGGACGATGACTCCTCATCCGAAGAAGACGCTCCCGTCAAACCTC
FD987502       --> ..................................................
EV567717       --> ..................................................

               201    -    251
UN09575        --> CTTCCTCCTCCGCCGCCGCCGTCACAATCGCCGTCCCAGGCAAACCCACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443546       <-- ..................................................
EV572598       <-- ..................................................
EY911057       <-- ..................................................
FD983548       <-- ..................................................
FD943939       <-- ..................................................
EY921496       --> CTTCCTCCTCCGCCGCCGCCGTCACAATCGCCGTCCCAGGCAAACCCACC
FY445824       --> CTTCCTCCTCCGCCGCCGCCGTCACAATCGCCGTCCCAGGCAAACCCACC
FY444572       --> CTTCCTCCTCCGCCGCCGCCGTCACAATCGCCGTCCCAGGCAAACCCACC
FD987502       --> ..................................................
EV567717       --> ..................................................

               251    -    301
UN09575        --> GCCTCCCTCCCCGCCGCCACCCAAGCCTCCGATTCAGAGTCCGGATCCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443546       <-- ..................................................
EV572598       <-- ..................................................
EY911057       <-- ..................................................
FD983548       <-- ..................................................
FD943939       <-- ..................................................
EY921496       --> GCCTCCCTCCCCGCCGCCACACAAGCCTCCGATTCAGAGTCCGGATCCGA
FY445824       --> GCCTCCCTCCCCGCCGCCACCCAAGCCTCCGATTCAGAGTCCGGATCCGA
FY444572       --> GCCTCCCTCCCCGCCGCCACCCAAGCCTCCGATTCAGAGTCCGGATCCGA
FD987502       --> ..................................................
EV567717       --> ..................................................

               301    -    351
UN09575        --> GACCGAGACGGACTCCGAATCTGAACCCGAACAGCCAACAAAAAACAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443546       <-- ..................................................
EV572598       <-- ..................................................
EY911057       <-- ..................................................
FD983548       <-- ..................................................
FD943939       <-- ..................................................
EY921496       --> GACCGAGACCGACTCCGAATCTGAGCCCGAACAGCCAACAAAAAACAAGG
FY445824       --> GACCGAGACGGACTCCGAATCTGAACCCGAACAGCCAACAAAAAACAAGG
FY444572       --> GACCGAGACGGACTCCGAATCTGAACCCGAACAGCCAACAAAAAACAAGG
FD987502       --> ..................................................
EV567717       --> ..................................................

               351    -    401
UN09575        --> GATCTGGCAAAGCCATCCTCACCGCCAAGACCGCTCCTCCTCCTCCTCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443546       <-- ..................................................
EV572598       <-- ..................................................
EY911057       <-- ..................................................
FD983548       <-- ..................................................
FD943939       <-- ..................................................
EY921496       --> GATCTGGCAAAGCCATCCTCACCGCGAAGCCAGCTCCTCCTCCTCCTCCG
FY445824       --> GATCTGGCAAAGCCATCCTCACCGCCAAGACCGCTCCTCCTCCTCCTCCG
FY444572       --> GATCTGGCAAAGCCATCCTCACCGCCAAGACCGCTCCTCCTCCTCCTCCG
FD987502       --> ..................................................
EV567717       --> ..................................................

               401    -    451
UN09575        --> GTTGCTCTAGCTCTACCGGCGAAGAAATCAGGAGCGAAGCGGCCTAGCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443546       <-- ..................................................
EV572598       <-- ..................................................
EY911057       <-- ..................................................
FD983548       <-- ..................................................
FD943939       <-- ..................................................
EY921496       --> GTTGCCCTAGCTCTACCGGCGAAGAAATCAGGAGCGAAGCGGCCTAGCGA
FY445824       --> GTTGCTCTAGCTCTACCGGCGAAGAAATCAGGAGCGAAGCGGCCTAGCGA
FY444572       --> GTTGCTCTAGCTCTACCGGCGAAGAAATCAGGAGCGAAGCGGCCTAGCGA
FD987502       --> ................................gGCGAAGCGGCCTAGCGA
EV567717       --> ..................................................

               451    -    501
UN09575        --> AGTCTCCTCTTCCAAGGAGACAACGAACTCGAAGCGAGTCAAGAAGGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443546       <-- ..................................................
EV572598       <-- ..................................................
EY911057       <-- ..................................................
FD983548       <-- ..................................................
FD943939       <-- ..................................................
EY921496       --> AGTCTCCTCTTCCAAGGAGACAACGAACTCAAAGCGGGTCAAGAAGGATG
FY445824       --> AGTCTCCTCTTCCAAGGAGACAACGAACTCGAAGCGAGTCAAGAAGGATG
FY444572       --> AGTCTCCTCTTCCAAGGAGACAACGAACTCGAAGCGAGTCAAGAAGGATG
FD987502       --> AGTCTCCTCTTCCAAGGAGACAACGAACTCAAAGCGAGTCAAGAAGGATG
EV567717       --> ..................................................

               501    -    551
UN09575        --> TTGAGGATAAGAAGATCGGAGAGGACTCGAAGAAGCCCGGCGCGTTTCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443546       <-- ..........GAAGATCGGAGAGGACTCGAAGAAGCCCGGCGCGTTTCAG
EV572598       <-- ........................................CGCGTTTCAG
EY911057       <-- ..................................................
FD983548       <-- ..................................................
FD943939       <-- ..................................................
EY921496       --> GTGAGGATAAGAAGATCGGAGAGGACTCGAAGAAGCCCGGCGCGTTTCAG
FY445824       --> TTGAGGATAAGAAGATCGGAGAGGACTCGAAGAAGCCCGGCGCGTTTCAG
FY444572       --> TTGAGGATAAGAAGATCGGAGAGGACTCGAAGAAGCCCGGCGCGTTTCAG
FD987502       --> GTGAGGATAAGAAGATCGGAGAGGACTCGAAGAAGCCCGGCGCGTTTCAG
EV567717       --> ........................gCTCGAAGAAGCCCGGCGCGTTTCAG

               551    -    601
UN09575        --> AGGCTATGGACGGAGGAAGACGAGATTGCCGTGTTACAAGGTATGATCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443546       <-- AGGCTATGGACGGAGGAAGACGAGATTGCCGTGTTACAAGGTATGATCGA
EV572598       <-- AGGCTATGGACGGAGGAAGACGAGATTGCCGTGTTACAAGGTATGATCGA
EY911057       <-- ....TATGGACGGAGGAAGACGAGATTGCCGTGTTACAAGGTATGATCGA
FD983548       <-- ............................CCGTGTTACAAGGTATGATCGA
FD943939       <-- ..................................................
EY921496       --> AGGCTATGGACGGAGGAAGACGAGATTGCCGTGTTACAAGGTATGATCGA
FY445824       --> AGGCTATGGACGGAGGAAGACGAGATTGCCGTGTTACAAGGTATGATCGA
FY444572       --> AGGCTATGGACGGAGGAAGACGAGATTGCCGTGTTACAAGGTATGATCGA
FD987502       --> AGGCTATGGACGGAGGAAGACGAGATTGCCGTGTTACAAGGTATGATCGA
EV567717       --> AGGCTATGGACGGAGGAAGACGAGATTGCCGTGTTACAAGGTATGATCGA

               601    -    651
UN09575        --> TTTCAAGAAGGAGACGGGGAAGTCTCCTTACGAGGACACTAATGTTTACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443546       <-- TTTCAAGAAGGAGACGGGGAAGTCTCCTTACGAGGACACTAATGTTTACT
EV572598       <-- TTTCAAGAAGGAGACGGGGAAGTCTCCTTACGAGGACACTAATGTTTACT
EY911057       <-- TTTCAAGAAGGAGACGGGGAAGTCTCCTTACGAGGACACTAATGTTTACT
FD983548       <-- TTTCAAGAAGGAGACGGGGAAGTCTCCTTACGAGGACACTAATGTTTACT
FD943939       <-- ..................................................
EY921496       --> TTTCAAGAAGGAGACGGGGAAGTCTCCTTACGAGGACACTAATGTTTACT
FY445824       --> TTTCAAGAAGGAGACGGGGAAGTCTCCTTACGAGGACACTAATGTTTACT
FY444572       --> TTTCAAGAAGGAGACGGGGAAGTCTCCTTACGAGGACACTAATGTTTACT
FD987502       --> TTTCAAGAAGGAGACGGGGAAGTCTCCTTACGAGGACACTAATGTTTACT
EV567717       --> TTTCAAGAAGGAGACGGGGAAGTCTCCTTACGAGGACACTAATGTTTACT

               651    -    701
UN09575        --> ATGATTATATAAAGAAGTCTATTAGCTTTGAGGTTAGCAAGAACCAGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443546       <-- ATGATTATATTAAGAAGTCTATTAGCTTTGAGGTTAGCAAGAACCAGTTT  Raphanus sativus cv GSK3-1
EV572598       <-- ATGATTATAT--AGAAGTCTATTAGCTTTGAGGTTAGCAAGAACCAGTTT  Raphanus raphanistrum subsp. landra
EY911057       <-- ATGATTATATAAAGAAGTCTATTAGCTTTGAGGTTAGCAAGAACCAGTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983548       <-- ATGATTATATAAAGAAGTCTATTAGCTTTGAGGTTAGCAAGAACCAGTTT  Raphanus raphanistrum subsp. landra
FD943939       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY921496       --> ATGATTATATAAAGAAGTCTATTAGCTATGAG-TTAGCAAGAACCAGTTT  Raphanus raphanistrum subsp. landra
FY445824       --> ATGATTATATTAAGAAGTCTATTAGCTTTGAGGTTAGCAAGAACCAGTTT  Raphanus sativus cv GSK3-1
FY444572       --> ATGATTATATTAAGAAGTCTATTAGCTTTGAGGTTAGCAAGAACCAGTTT  Raphanus sativus cv GSK3-1
FD987502       --> ATGATTATATAAAGAAGTCTATTAGCTTTGAGGTTAGCAAGAACCAGTTT  Raphanus raphanistrum subsp. landra
EV567717       --> ATGATTATATA--GAAGTCTATTAGCTTTGAGGTTAGCAAGAACCAGTTT  Raphanus raphanistrum subsp. landra

               701    -    751
UN09575        --> ATGGATAAGATTAGGAGCTTAAGGAAGAAGTACATTGGTAAAGAGAAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443546       <-- ATGGATAAGATTAGGAGCTTAAGGAAGAAGTACATTGGTAAAGAGAAACC
EV572598       <-- ATGGATAAGATTAGGAGCTTAAGGAAGAAGTACATTGGTAAAGAGAAACC
EY911057       <-- ATGGATAAGATTAGGAGCTTAAGGAAGAAGTACATTGGTAAAGAGAAACC
FD983548       <-- ATGGATAAGATTAGGAGCTTAAGGAAGAAGTACATTGGTAAAGAGAAACC
FD943939       <-- ..GGATAAGATTAGGAGCTTAAGGAAGAAGTACATTGGTAAAGAGAAACC
EY921496       --> ATGGATAAGATTAGGAGCT...............................
FY445824       --> ATGGATAAGATTAGGAGCTTAAGGAAGAAGTACATTGGTAAAGAGAAACC
FY444572       --> ATGGATAAGATTAGGAGCTTAAGGAAGAAGTACATTGGTAAAGAGAAACC
FD987502       --> ATGGATAAGATTAGGAGCTTAAGGAAGAAGTACATTGGTAAAGAGAAACC
EV567717       --> ATGGATAAGATTAGGAGCTTAAGGAAGAAGTACATTGGTAAAGAGAAACC

               751    -    801
UN09575        --> GTCATTCACCAAACCGCATGATCAGAAGTCTTATAGGTTGTGTCAGTACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443546       <-- GTCATTCACCAAACCGCATGATCAGAAGTCTTATAGGTTGTGTCAGTACA  Raphanus sativus cv GSK3-1
EV572598       <-- GTCATTCACCAAACCGCATGATCAGAAGTCTTATAGGTTGTGTCAGTATA  Raphanus raphanistrum subsp. landra
EY911057       <-- GTCATTCACCAAACCACATGATCAGAAGTCTTATAGGTTGTGTCAGTACA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983548       <-- GTCATTCACCAAACCGCATGATCAGAAGTCTTATAGGTTGTGTCAGTATA  Raphanus raphanistrum subsp. landra
FD943939       <-- GTCATTCACCAAACCTCATGATCAGAAGTCTTATAGGTTGTGTCAGTACA  Raphanus sativus cv Early Scarlet Globe
EY921496       --> ..................................................  Raphanus raphanistrum subsp. landra
FY445824       --> GTCATTCACCAAACCGCATGATCAGAAGTCTTATAGGTTGTGTCAGTACA  Raphanus sativus cv GSK3-1
FY444572       --> GTCATTCACCAAACCGCATGATCAGAAGTCTTATAGGTTGTGTCAGTACA  Raphanus sativus cv GSK3-1
FD987502       --> GTCATTCACCAAACCGCATGATCAGAAGTCTTATAGGTTGTGTCAGTATA  Raphanus raphanistrum subsp. landra
EV567717       --> GTCATTCACCAAACCGCATGATCAGAAGTCTTATAGGTTGTGTCAGTATA  Raphanus raphanistrum subsp. landra

               801    -    851
UN09575        --> TCTGGGGACCTGATGGGATGGGTCTTGAGTCGGCTGTTAAGTCGAACGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443546       <-- TCTGGGGACCTGATGGGATGGGTCTTGAGTCGGCTGTTAAGTCGAACGGC  Raphanus sativus cv GSK3-1
EV572598       <-- TCTGGGGACCTGATGGGATGGGTCTTGAGTCCGCGGTTAAGTCGAACGGC  Raphanus raphanistrum subsp. landra
EY911057       <-- TCTGGGGACCTGATGGGATGGGTCTTGAGTCGGCTGTTAAGTCAAACGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983548       <-- TCTGGGGACCTGATGGGATGGATCTTGAGTCCGCGGTTAAGTCGAACGGC  Raphanus raphanistrum subsp. landra
FD943939       <-- TCTGGGGACCTGATGGGATGGGTCTTGAGTCGGCTGTTAAGTCGAACGGC  Raphanus sativus cv Early Scarlet Globe
EY921496       --> ..................................................  Raphanus raphanistrum subsp. landra
FY445824       --> TCTGGGGACCTGATGGGATGGGTCTTGAGTCGGCTGTTAAGTCGAACGGC  Raphanus sativus cv GSK3-1
FY444572       --> TCTGGGGACCTGATGGGATGGGTCTTGAGTCGGCTGTTAAGTCGAACGGC  Raphanus sativus cv GSK3-1
FD987502       --> TCTGGGGACCTGATGGGATGGATCTTGAGTCCGCGGTTAAGTCGAACGGC  Raphanus raphanistrum subsp. landra
EV567717       --> TCTGGGGACCTGATGGGATGGGTCTTGAGTCCGCGGTTAAGTCGAACGGC  Raphanus raphanistrum subsp. landra

               851    -    901
UN09575        --> GCGTCGAAAAAGAGCCAGAAGAAGACTAAGAAGCTCGACTCCGTGAAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443546       <-- GCGTCGAAAAAGAGCCAGAAGAAGACTAAGAAGCTCGACTCCGTGAAGCA
EV572598       <-- GCGTCGAAAAAGAGCCAGAAGAAGACTAAGAAGCTCGACTCCGTGAAGCA
EY911057       <-- GCGTCGAAAAAGAGCCAGAAGAAGACTAAGAAGCTCGACTCCGTGAAGCA
FD983548       <-- GCGTCGAAAAAGAGCCAGAAGAAGACTAAGAAGCTCGACTCCGTGAAGCA
FD943939       <-- GCGTCGAAAAAGAGCCAGAAGAAGACTAAGAAGCTCGACTCCGTGAAGCA
EY921496       --> ..................................................
FY445824       --> GCGTC.............................................
FY444572       --> GCGTCGAAAAGGAGCCAGAAGAAGACTAAGAAGCTCGACTCCGTGAAGCA
FD987502       --> GCGTCGAAAAAGAGCCAGAAGAAGACTAAGAAGCTCGACTCCGTGAAGCA
EV567717       --> GCGTCGAAAAAGAGCCAGAAGAAGACTAAGAAGCTCGACTCCGTGAAGCA

               901    -    951
UN09575        --> GGAGCTTTCTTTCGGCGGCGCCTCGCCTAATGGTAAAGCGGTTGTTGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443546       <-- GGAGCTTTCTTTCGGCGGCGCCTCGCCTAATGGTAAAGCGGTTGTTGGTG
EV572598       <-- GGAGCTTTCTTTCGGCGGCGCCTCGCCTAATGGTAAAGCGGTTGTTGGTG
EY911057       <-- GGAGCTTTCTTTCGGCGGCGCCTCGCCTAATGGTAAAGCGGTTGTTGGTG
FD983548       <-- GGAGCTTTCTTTCGGCGGCGCCTCGCCTAATGGTAAAGCGGTTGTTGGTG
FD943939       <-- GGAGCTTTCTTTTGG---CGCCTCGCCTAATGGTAAAGCGGTTGTTGGTG
EY921496       --> ..................................................
FY445824       --> ..................................................
FY444572       --> GGAGCTTTCTTTCGGCGGCGCCTCGCCTAATGGTAAAGCGGTTGTTGGTG
FD987502       --> GGAGCTTTCTTTCGGCGGCGCCTCGCCTAATGGTAAAGCGGTTGT.....
EV567717       --> GGAGCTTTCTTTCGGCGGCGCCTCGCCTAATGGTAAAGCGGTTGTTGGTG

               951    -   1001
UN09575        --> ATGATGATGAGAAAGATGTGGAGTCGTCTGTTGCTGCTAAGAAGCATGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443546       <-- ATGATGATGAGAAAGATGTGGAGTCGTCTGTTGCTGCTAAGAAGCATGAT
EV572598       <-- ATGATGATGAGAAAGATGTGGAGTCGTCTGTTGCTGCTAAGAAGCATGAT
EY911057       <-- ATGATGATGAGAAAGATGTGGAGTCGTCTGTTGCTGCTAAGAAGCATGAT
FD983548       <-- ATGATGATGAGAAAGATGTGGAGTCGTCTGTTGCTGCTAAGAAGCATGAT
FD943939       <-- ATGATGAGGAGAAAGATGTGGAGTCGTCTCTTGCTGCTAAGAAACATGAT
EY921496       --> ..................................................
FY445824       --> ..................................................
FY444572       --> ATGATGATGAGAAAGATGTGGAGTCGTCTGTTGC................
FD987502       --> ..................................................
EV567717       --> ATGATGATGAGAAAGATGTGGAGTCGTCTGTTGCTGCTAAGAAGCATGAT

               1001   -   1051
UN09575        --> TGGTTCGAGAACTCGTTTCTTGTTAAGGGGATTGCGGGGTTTGGTGTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443546       <-- TGGTTCGAGAACTCGTTTCTTGTTAAGGGGATTGCGGGGTTTGGTGTTGA
EV572598       <-- TGGTTCGAGAACTCCTTTCTTGTTAAGGGGATTGCGGGGTTTGGTGTTGA
EY911057       <-- TGGTTCGAGAACTCGTTTCTTGTTAAGGGGATTGCGGGGTTTGGTGTTGA
FD983548       <-- TGGTTCGAGAACTCCTTTCTTGTTAAGGGGATTGCGGGGTTTGGTGTTGA
FD943939       <-- TGGTTCGAGAACTCGTTTCTTGTTAAGGGGATTGCGGGGTTTGGTGTTGA
EY921496       --> ..................................................
FY445824       --> ..................................................
FY444572       --> ..................................................
FD987502       --> ..................................................
EV567717       --> TGGTTCGAGAACTCCTTTCTTGTTAAGGGGATTGCGGGGTTTGGTGTTGA

               1051   -   1101
UN09575        --> TGAGCATTGTGTGAAACAGAGGTGGAGTTTGGTTCCGGTGGAGACCAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443546       <-- TGAGCATTGTGTGAAACAGAGGTGGAGTTTGGTTCCGGTGGAGACCAAGA
EV572598       <-- TGAGTATTGTGTGAAACAGAGGTGGAGTTTGGTTCCGGTGGAGACCAAGA
EY911057       <-- TGAGCATTGTGTGAAACAGAGGTGGAGTTTGGTTCCGGTGGAGACCAAGA
FD983548       <-- TGAGCATTGTGTGAAACAGAGGTGGAGTTTGGTTCCGGTGGAGACCAAGA
FD943939       <-- TGAGCATTGTGTGAAACAGAGGTGGAGTTTGGTTCCGGTGGAGACCAAGA
EY921496       --> ..................................................
FY445824       --> ..................................................
FY444572       --> ..................................................
FD987502       --> ..................................................
EV567717       --> TGAGTATTGTGTGAAACAGAGGTGGAGTTTGGTTCCGGTGGAGACCAAGA

               1101   -   1151
UN09575        --> AGAAGGTTGAAGAGAAGCTTAAGCTGTTGCAGGCCAAGGAAATCGAGTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443546       <-- AGAAGGTTGAAGAGAAGCTTAAGCTGTTGCAGGCCAAGGAAATCGAGTAT
EV572598       <-- AGAAGGTTGAAGAGAAGCTTAAGCTGTTGCAGGCCAAGGAAATCGAGTAT
EY911057       <-- AGAAGGTTGAAGAGAAGCTTAAGCTGTTGCAGGCCAAGGAAATCGAGTAT
FD983548       <-- AGAAGGTTGAAGAGAAGCTTAAGCTGTTGCAGGCCAAGGAAATCGAGTAT
FD943939       <-- AGAAGGTTGAAGAGAAGCTTAAGCTGTTGCAGGCCAAGGAAATTGAGTAT
EY921496       --> ..................................................
FY445824       --> ..................................................
FY444572       --> ..................................................
FD987502       --> ..................................................
EV567717       --> AGAAGGTTGAAGAGAAGCTTAAGCTGTTGCAGGCCAAGGAAATCGAGTAT

               1151   -   1201
UN09575        --> GTGTTGCAGAAGACTGAGGTTTTGCATGAAGTGACCTCTATGATCGCTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443546       <-- GTGTTGCAGAAGACTGAGGTTTTGCATGAAGTGACCTCTATGATCGCTGA
EV572598       <-- GTGTTGCAGAAGACTGAGGTTTTGCATGAAGTGACCTCTATGATCGCTGA
EY911057       <-- GTGTTGCAGAAGACTGAGGTTTTGCATGAAGTGACCTCTATGATCGCTGA
FD983548       <-- GTGTTGCAGAAGACTGAGGTTTTGCATGAAGTGACCTCTATGATCGCTGA
FD943939       <-- GTGTTGCAGAAGACTGAGGTTTTGCATGAAGTGACCTCTATGATCGCTGA
EY921496       --> ..................................................
FY445824       --> ..................................................
FY444572       --> ..................................................
FD987502       --> ..................................................
EV567717       --> GTGTTGCAGAAGACTGAGGTTTTGCATGAAGTGACCTCTATGATCGCTGA

               1201   -   1251
UN09575        --> AGCTTCTAAGAACAAGCTGTTAGATATATAAGATCGAGTGCAAATGCCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443546       <-- AGCTTCTAAGAACAAGCTGTTAGATATATAAGATCGAGTGCAAATGCCTC
EV572598       <-- AGCTTCTAAGAACAAGCTGTTAGATATATAAGATCGAGTGCAAATGCCTC
EY911057       <-- AGCTTCTAAGAACAAGCTGTTAGATATATAAGATCGAGTGCAAATGCCTC
FD983548       <-- AGCTTCTAAGAACAAGCTGTTAGATATATAAGATCGAGTGCAAATGCCTC
FD943939       <-- AGCATCTAAGAACAAGCTGTTAGATATATAAGATTGAGTGCAAATGCCTC
EY921496       --> ..................................................
FY445824       --> ..................................................
FY444572       --> ..................................................
FD987502       --> ..................................................
EV567717       --> AGCTTCTAA.........................................

               1251   -   1301
UN09575        --> TCTTTTGTTTTT-GTTTTTATTCCCTGTTATGATCTATCTAT----GTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443546       <-- TCTTTTGTTTTT-GTTTTTATTCCCTGTTATGATCTATCTAT----GTAG
EV572598       <-- TCTTTTGTTTTT-GTTTTTATTCCCTGTTATGATCTATCTAT----GTAG
EY911057       <-- TCTTTTGTTTTT-GTTTTTATTCCCTGTTATGATCTATCTAT----GTAG
FD983548       <-- TCTTTTGTTTTT-GTTTTTATTCCCTGTTATGATCTATCTAT----GTAG
FD943939       <-- TCTTTTGTTTTTTGTTTTTATTCCCTGTTATGATCTATCTATCTATGTAG
EY921496       --> ..................................................
FY445824       --> ..................................................
FY444572       --> ..................................................
FD987502       --> ..................................................
EV567717       --> ..................................................

               1301   -   1351
UN09575        --> TTTTCTGGTTTATTTTGATGGTTTTCTCTCATATGAAACTTCTCTGTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443546       <-- TTTTCTGGTTTATTTTGATGGTTTTCTCTCATATGAAACTTCTCTGTTTT
EV572598       <-- TTTTCTGGTTTATTTTGATGGTTTTCTCTCATATGAAACTTCTCTGTTTT
EY911057       <-- TTTTCTGGTTTATTTTGACGGTTTTCTCTC....................
FD983548       <-- TTTTCTGGTTTATTTTGATGGTTTTCTCTCATATGAAACTTCTCTGTTTT
FD943939       <-- TTTTCTGGTTTATTTTGATGGTTTTCTCTCATATGAAACTTCTCTGTTTT
EY921496       --> ..................................................
FY445824       --> ..................................................
FY444572       --> ..................................................
FD987502       --> ..................................................
EV567717       --> ..................................................

               1351   -   1401
UN09575        --> TGTTTTGTTGGTTATATATAAAAGCACCATTGAAGTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY443546       <-- GGTTTTGTTGGTTATATATAAAAGCACCATg.......
EV572598       <-- TGTTTTGTTGGTTATATATAAAAGCACCATTGAAGg..
EY911057       <-- ......................................
FD983548       <-- TGTTTTGTTGGTTATATATAAAAGCACCATTG......
FD943939       <-- GGTTTTGTTGGTTATATATAAAAGCACCATTGAAGTAG
EY921496       --> ......................................
FY445824       --> ......................................
FY444572       --> ......................................
FD987502       --> ......................................
EV567717       --> ......................................