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Alignment for radish unigene UN09576

               1      -     51
UN09576        --> AGCTGATTCAGTTTTGCCATATAAAGTAGAAAATATATTTACATCTTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX757040       <-- ....GATTCAGTTTTGCCATATAAAGTAGAAAATATATTTACATTTTTTT
EW725337       <-- ..................................ATATTTACATCTTTTT
EY905640       <-- ..................................................
FD940392       <-- ..................................................
EV535199       <-- ..................................................
FD562873       <-- ..................................................
FD569542       <-- ..................................................
EX887925       <-- ..................................................
FD563509       <-- ..................................................
EW716917       <-- ..................................................
FD542874       <-- ..................................................
EV537810       <-- ..................................................
EV539937       --> AGCTGATTCAGTTTTGCCATATAAAGTAGAAAATATATTTACATTTTTTT
FD566673       --> AGCTGATTCAGTTTTGCCATATAAAGTAGAAAATATATTTACATCTTTTT
FD573727       --> .GCTGATTCAGTTTTGCCATATAAAGTAGAAAATATATTTACATCTTTTT
EW730727       --> ..................................ATATTTACATCTTTTT
EW721360       --> ....................................ATTTACATCTTTTT
FD538832       --> .........................................CATTTTTTT
FD567130       --> .........................................CATCTTTTT
FD936284       --> .........................................CATCTTTTT
EY902029       --> ..................................................

               51     -    101
UN09576        --> ATTATTAACAAGATATAACTTCTTCTTTTTTTAAGACAACTTTTTCTCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX757040       <-- ATTATTAACAAGATATAACTTCTTCTTTTTT-AAGACAACTTTTTCTCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW725337       <-- ATTATTAACAAGATATAACTTC---TTTTTTTAAGACAACTTTTTCTCTA  Raphanus sativus cv Early Scarlet Globe
EY905640       <-- ......AACAAGATATAACTTCTTCTTTTTTTAAGACAACTTTTTCTCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD940392       <-- ..................................................  Raphanus sativus var. oleiformis
EV535199       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD562873       <-- ..................................................  Raphanus sativus var. oleiformis
FD569542       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX887925       <-- ..................................................  Raphanus sativus var. oleiformis
FD563509       <-- ..................................................  Raphanus sativus var. oleiformis
EW716917       <-- ..................................................  Raphanus sativus var. oleiformis
FD542874       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV537810       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV539937       --> ATTATTAACAAGATATAACTTCTTCTTTTTTTAAGACAACTTTTTCTCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD566673       --> ATTATTAACAAGATATAACTTCTTCTTTTTTTAAGACAACTTTTTCTCTA  Raphanus sativus var. oleiformis
FD573727       --> ATTATTAACAAGATATAACTTCTT---TTTTTAAGACAACTTTTTCTCTA  Raphanus sativus cv Early Scarlet Globe
EW730727       --> ATTATTAACAAGATATAACTTCTT---TTTTTAAGACAACTTTTTCTCTA  Raphanus sativus cv Early Scarlet Globe
EW721360       --> ATTATTAACAAGATATAACTTCTT---TTTTTAAGACAACTTTTTCTCTA  Raphanus sativus var. oleiformis
FD538832       --> ATTATTAACAAGATATAACTTCTTCTTTTTTTAAGACAACTTTTTCTCTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD567130       --> ATTATTAACAAGATATAACTTCTTCTTTTTTTAAGACAACTTTTTCTCTA  Raphanus sativus var. oleiformis
FD936284       --> ATTATTAACAAGATATAACTTCTT---TTTTTAAGACAACTTTTTCTCTA  Raphanus sativus var. oleiformis
EY902029       --> ......AACAAGATATAACTTCTTCTTTTTTTAAGACAACTTTTTCTCTA  Raphanus raphanistrum subsp. raphanistrum (MS)

               101    -    151
UN09576        --> CATGCAATCTTGTAGAGACGCAGGCATAGACATCAAACATACACAATCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX757040       <-- CATGCAATCTTGTAGAGACGCAGGCATAGACATCAAACATACACAATCAA
EW725337       <-- CATGCAATCTTGTAGAGACGCAGGCATAGACATCAAACATACACAATCAA
EY905640       <-- CATGCAATCTTGTAGAGACGCAGGCATAGACATCAAACATACACAATCAA
FD940392       <-- ...............................................tcA
EV535199       <-- ..................................................
FD562873       <-- ..................................................
FD569542       <-- ..................................................
EX887925       <-- ..................................................
FD563509       <-- ..................................................
EW716917       <-- ..................................................
FD542874       <-- ..................................................
EV537810       <-- ..................................................
EV539937       --> CATGCAATCTTGTAGAGACGCAGGCATAGACATCAAACATACACAATCAA
FD566673       --> CATGCAATCTTGTAGAGACGCAGGCATAGACATCAAACATACACAATCAA
FD573727       --> CATGCAATCTTGTAGAGACGCAGGCATAGACATCAAACATACACAATCAA
EW730727       --> CATGCAATCTTGTAGAGACGCAGGCATAGACATCAAACATACACAATCAA
EW721360       --> CATGCAATCTTGTAGAGACGCAGGCATAGACATCAAACATACACAATCAA
FD538832       --> CATGCAATCTTGTAGAGACGCAGGCATAGACATCAAACATACACAATCAA
FD567130       --> CATGCAATCTTGTAGAGACGCAGGCATAGACATCAAACATACACAATCAA
FD936284       --> CATGCAATCTTGTAGAGACGCAGGCATAGACATCAAACATACACAATCAA
EY902029       --> CATGCAATCTTGTAGAGACGCAGGCATAGACATCAAACATACACAATCAA

               151    -    201
UN09576        --> ACACAAAATCAAAGCAAAACATCAAGAAATCACAAATCCGTTTAATCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX757040       <-- ACACAAAATCAAAGCAAA-CATCAAGAAATCACAAATCCGTTTAATCAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW725337       <-- ACACAAAATCAAAGCAAAACATCAAGAAATCACAAATCCGTTTAATCAAA  Raphanus sativus cv Early Scarlet Globe
EY905640       <-- ACACAAAATCAAAGCAAA-CATCAAGAAATCACAAATCCGTTTAATCAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD940392       <-- ACACAAA-TC-AAGCAAA-CATCA-G-AATCACAA-TCCGTTTA-TC-AA  Raphanus sativus var. oleiformis
EV535199       <-- ..ACAAAATCAAAGCAAA-CATCA-GAAATCACAAATCCGTTTAATCAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD562873       <-- .......................tcagAATCACAA-TCCGTTTA-TCAAG  Raphanus sativus var. oleiformis
FD569542       <-- .........................................TTAATCAAA  Raphanus sativus cv Early Scarlet Globe
EX887925       <-- ..................................................  Raphanus sativus var. oleiformis
FD563509       <-- ..................................................  Raphanus sativus var. oleiformis
EW716917       <-- ..................................................  Raphanus sativus var. oleiformis
FD542874       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV537810       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV539937       --> ACACAAAATCAAAGCAAA-CATCAAGAAATCACAAATCCGTTTAATCAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD566673       --> ACACAAAATCAAAGCAAAACATCAAGAAATCACAAATCCGTTTAATCAAG  Raphanus sativus var. oleiformis
FD573727       --> ACACAAAATCAAAGCAAAACATCAAGAAATCACAAATCCGTTTAATCAAA  Raphanus sativus cv Early Scarlet Globe
EW730727       --> ACACAAAATCAAAGCAAAACATCAAGAAATCACAAATCCGTTTAATCAAA  Raphanus sativus cv Early Scarlet Globe
EW721360       --> ACACAAAATCAAAGCAAAACATCAAGAAATCACAAATCCGTTTAATCAAA  Raphanus sativus var. oleiformis
FD538832       --> ACACAAAATCAAAGCAAA-CATCAAGAAATCACAAATCCGTTTAATCAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD567130       --> ACACAAAATCAAAGCAAAACATCAAGAAATCACAAATCCGTTTAATCAAA  Raphanus sativus var. oleiformis
FD936284       --> ACACAAAATCAAAGCAAAACATCAAGAAATCACAAATCCGTTTAATCAAA  Raphanus sativus var. oleiformis
EY902029       --> ACACAAAATCAAAGCAAA-CATCAAGAAATCACAAATCCGTTTAATCAAA  Raphanus raphanistrum subsp. raphanistrum (MS)

               201    -    251
UN09576        --> CTCGGACCTCGCGGGTTTAAACTTCTTGGTAAGAACCAATGAACACATCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX757040       <-- CTCGGACCTCGCGGGTTTAAACTTCTTGGTAAGAACCAATGAACACATCG
EW725337       <-- CTCGGACCTCGCGGGTTTAAACTTCTTGGTAAGAACCAATGAACACATCG
EY905640       <-- CTCGGACCTCGCGGGTTTAAACTTCTTGGTAAGAACCAATGAACACATCG
FD940392       <-- CTCGGACCTCGCGGGTTTAA-CTTCT-GGTAAGAACCAATGAACACATCG
EV535199       <-- CTCGGACCTCGCGGGTTTAAACTTCTTGGTAAGAACCAATGAACACATCG
FD562873       <-- CTCG-ACCTCGCGGGTTTAAACTTCT-GGTAAGAACCAATGAACACATCG
FD569542       <-- CTCG-ACCTCGCGGGTTTAAACTTCT-GGTAAGAACCAATGAACACATCG
EX887925       <-- .......................TCTTGGTAAGAACCAATGAACACATCG
FD563509       <-- ..................................................
EW716917       <-- ..................................................
FD542874       <-- ..................................................
EV537810       <-- ..................................................
EV539937       --> CTCGGACCTCGCGGGTTTAAACTTCTTGGTAAGAACCAATGAACACATCG
FD566673       --> CTCGGACCTCGCGGGTTTAAACTTCTTGGTAAGAACCAATGAACACATCG
FD573727       --> CTCGGACCTCGCGGGTTTAAACTTCTTGGTAAGAACCAATGAACACATCG
EW730727       --> CTCGGACCTCGCGGGTTTAAACTTCTTGGTAAGAACCAATGAACACATCG
EW721360       --> CTCGGACCTCGCGGGTTTAAACTTCTTGGTAAGAACCAATGAACACATCG
FD538832       --> CTCGGACCTCGCGGGTTTAAACTTCTTGGTAAGAACCAATGAACACATCG
FD567130       --> CTCGGACCTCGCGGGTTTAAACTTCTCGGTAAGAACCAATGAACACATCG
FD936284       --> CTCGGACCTCGCGGGTTTAAACTTCTTGGTAAGAACCAATGAACACATCG
EY902029       --> CTCGGACCTCGCGGGTTTAAACTTCTTGGTAAGAACCAATGAACACATCG

               251    -    301
UN09576        --> CCGTAGATGAGTCCAGCAAGTGCACCACCAACGAGTGGACCCACCCAGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX757040       <-- CCGTAGATGAGTCCAGCAAGTGCACCACCAACGAGTGGACCCACCCAGTA
EW725337       <-- CCGTAGATGAGTCCAGCAAGTGCACCACCAACGAGTGGACCCACCCAGTA
EY905640       <-- CCGTAGATGAGTCCAGCAAGTGCACCACCAACGAGTGGACCCACCCAGTA
FD940392       <-- C-GTAGATGAGTCCAGCAAGTGCACCACCAACGAGTG-ACCCACCCAGTA
EV535199       <-- CCGTAGATGAGTCCAGCAAGTGCACCACCAACGAGTGGACCCACCCAGTA
FD562873       <-- C-GTAGATGAGTCCAGCAAGTGCACCACCAACGAGTGGACCCACCCAGTA
FD569542       <-- C-GTAGATGAGTCCAGCAAGTGCACCACCAACGAGTGGACCCACCCAGTA
EX887925       <-- CCGTAGATGAGTCCAGCAAGTGCACCACCAACGAGTGGACCCACCCAGTA
FD563509       <-- .....GATGAGTCCAGCAAGTGCACCACCAACGAGTGGACCCACCCAGTA
EW716917       <-- .....................GCACCACCAACGAGTGGACCCACCCAGTA
FD542874       <-- ................................................TA
EV537810       <-- ..................................................
EV539937       --> CCGTAGATGAGTCCAGCAAGTGCACCACCAACGAGTGGACCCACCCAGTA
FD566673       --> CCGTAGATGAGTCCAGCAAGTGCACCACCAACGAGTGGACCCACCCAGTA
FD573727       --> CCGTAAATGAGTCCAGCAAGTGCACCACCAACGAGTGGACCCACCCAGTA
EW730727       --> CCGTAGATGAGTCCAGCAAGTGCACCACCAACGAGTGGACCCACCCAGTA
EW721360       --> CCGTAAATGAGTCCAGCAAGTGCACCACCAACGAGTGGACCCACCCAGTA
FD538832       --> CCGTAAATGAGTCCAGCAAGTGCACCACCAACGAGTGGACCCACCCAGTA
FD567130       --> CCGTAAATGAGTCCAGCAAGTGCACCACCAACGAGTGGACCCACCCAGTA
FD936284       --> CCGTAGATGAGTCCAGCAAGTGCACCACCAACGAGTGGACCCACCCAGTA
EY902029       --> CCGTAAATGAGTCCAGCAAGTGCACCACCAACGAGTGGACCCACCCAGTA

               301    -    351
UN09576        --> GATCCAGATTTGTGACAAGTCTCCACTGACAACAGCTGGTCCGAACGACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX757040       <-- GATCCAGATTTGTGACAAGTCTCCACTGACAACAGCTGGTCCGAACGACC
EW725337       <-- GATCCAGATTTGTGACAAGTCTCCACTGACAACAGCTGGTCCGAACGACC
EY905640       <-- GATCCAGATTTGTGACAAGTCTCCACTGACAACAGCTGGTCCGc......
FD940392       <-- GATCCAGATTTGTGACAAGTCTCCACTGACAACAGCTGGTCCGAACGACC
EV535199       <-- GATCCAGATTTGTGACAAGTCTCCACTGACAACAGCTGGTCCGAACGACC
FD562873       <-- GATCCAGATTTGTGACAAGTCTCCACTGACAACAGCTGGTCCGAACGACC
FD569542       <-- GATCCAGATTTGTGACAAGTCTCCACTGACAACAGCTGGTCCGAACGACC
EX887925       <-- GATCCAGATTTGTGACAAGTCTCCACTGACAACAGCTGGTCCGAACGACC
FD563509       <-- GATCCAGATTTGTGACAAGTCTCCACTGACAACAGCTGGTCCGAACGACC
EW716917       <-- GATCCAGATTTGTGACAAGTCTCCACTGACAACAGCTGGTCCGAACGACC
FD542874       <-- GATCCAGATT-GTGACAAGTCTCCACTGACAACAGCTGGTCCGAACGACC
EV537810       <-- ..................................................
EV539937       --> GATCCAGATTTGTGACAAGTCTCCACTGACAACAGCTGGTCCGAACGACC
FD566673       --> GATCCAGATTTGTGACAAGTCTCCACTGACAACAGCTGGTCCGAACGACC
FD573727       --> GATCCAGATTTGTGACAAGTCTCCACTGACAACAGCTGGTCCGAACGACC
EW730727       --> GATCCAGATTTGTGACAAGTCTCCACTGACAACAGCTGGTCCGAACGACC
EW721360       --> GATCCAGATTTGTGACAAGTCTCCACTGACAACAGCTGGTCCGAACGACC
FD538832       --> GATCCAGATTTGTGACAAGTCTCCACTGACAACAGCTGGTCCGAACGACC
FD567130       --> GATCCAGATTTGTGACAAGTCTCCACTGACAACAGCTGGTCCGAACGACC
FD936284       --> GATCCAGATTTGTGACAAGTCTCCACTGACAACAGCTGGTCCGAACGACC
EY902029       --> GATCCAGATTTGTGACAAGTCTCCACTGACAACAGCTGGTCCGc......

               351    -    401
UN09576        --> TCGCTGGGTTCATGGAGCCACCGCTGAAAGGACCAGCAGCGAGGATGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX757040       <-- TCGCTGGGTTCATGGAGCCACCGCTGAAAGGACCAGCAGCGAGGATGTTG
EW725337       <-- TCGCTGGGTTCATGGAGCCACCGCTGAAAGGACCAGCAGCGAGGATGTTG
EY905640       <-- ..................................................
FD940392       <-- TCGCTGGGTTCATGGAGCCACCGCTGAAAGGACCAGCAGCGAGGATGTTG
EV535199       <-- TCGCTGGGTTCATGGAGCCACCGCTGAAAGGACCAGCAGCGAGGATGTTG
FD562873       <-- TCGCTGGGTTCATGGAGCCACCGCTGAAAGGACCAGCAGCGAGGATGTTG
FD569542       <-- TCGCTGGGTTCATGGAGCCACCGCTGAAAGGACCAGCAGCGAGGATGTTG
EX887925       <-- TCGCTGGGTTCATGGAGCCACCGCTGAAAGGACCAGCAGCGAGGATGTTG
FD563509       <-- TCGCTGGGTTCATGGAGCCACCGCTGAAAGGACCAGCAGCGAGGATGTTG
EW716917       <-- TCGCTGGGTTCATGGAGCCACCGCTGAAAGGACCAGCAGCGAGGATGTTG
FD542874       <-- TCGCTGGGTTCATGGAGCCACCGCTGAAAGGACCAGCAGCGAGGATGTTG
EV537810       <-- ..................................................
EV539937       --> TCGCTGGGTTCATGGAGCCACCGCTGAAAGGACCAGCAGCGAGGATGTTG
FD566673       --> TCGCTGGGTTCATGGAGCCACCGCTGAAAGGACCAGCAGCGAGGATGTTG
FD573727       --> TCGCTGGGTTCATGGAGCCACCGCTGAAAGGACCAGCAGCGAGGATGTTG
EW730727       --> TCGCTGGGTTCATGGAGCCACCGCTGAAAGGACCAGCAGCGAGGATGTTG
EW721360       --> TCGCTGGGTTCATGGAGCCACCGCTGAAAGGACCAGCAGCGAGGATGTTG
FD538832       --> TCGCTGGGTTCATGGAGCCACCGCTGAAAGGACCAGCAGCGAGGATGTTG
FD567130       --> TCGCTGGGTTCATGGAGCCACCGCTGAAAGGACCAGCAGCGAGGATGTTG
FD936284       --> TCGCTGGGTTCATGGAGCCACCGCTGAAAGGACCAGCAGCGAGGATGTTG
EY902029       --> ..................................................

               401    -    451
UN09576        --> GCACCAACGATGAAACCGATAGCGATTGGAGCAATGGTTCCTAGCGATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX757040       <-- GCACCAACGATGAAACCGATAGCGATTGGAGCAATGGTTCCTAGCGATCC
EW725337       <-- GCACCAACGATGAAACCGATAGCGATTGGAGCAATGGTTCCTAGCGATCC
EY905640       <-- ..................................................
FD940392       <-- GCACCAACGATGAAACCGATAGCGATTGGAGCAATGGTTCCTAGCGATCC
EV535199       <-- GCACCAACGATGAAACCGATAGCGATTGGAGCAA---TGCCTAGCGATCC
FD562873       <-- GCACCAACGATGAAACCGATAGCGATTGGAGCAATGGTTCCTAGCGATCC
FD569542       <-- GCACCAACGATGAAACCGATAGCGATTGGAGCAATGGTTCCTAGCGATCC
EX887925       <-- GCACCAACGATGAAACCGATAGCGATTGGAGCAATGGTTCCTAGCGATCC
FD563509       <-- GCACCAACGATGAAACCGATAGCGATTGGAGCAATGGTTCCTAGCGATCC
EW716917       <-- GCACCAACGATGAAACCGATAGCGATTGGAGCAATGGTTCCTAGCGATCC
FD542874       <-- GCACCAACGATGAAACCGATAGCGATTGGAGCAATGGTTCCTAGCGATCC
EV537810       <-- ..........TGAAACCGATAGCGATTGGAGCAATGGTTCCTAGCGATCC
EV539937       --> GCACCAACGATGAAACCGATAGCGATTGGAGCAATG---CCTAGCGATCC
FD566673       --> GCACCAACGATGAAACCGATAGCGATTGGAGCAATGGTTCCTAGCGATCC
FD573727       --> GCACCAACGATGAAACCGATAGCGATTGGAGCAATG..............
EW730727       --> GCACCAACGATGAAACCGATAGCGATTGGAGCAATGGTTCCTAGCGATCC
EW721360       --> GCACCAACGATGAAACCGATAGCGATTGGAGCAATGGTTCCTAGCGATCC
FD538832       --> GCACCAACGATGAAACCGATAGCGATTGGAGCAATGGTTCCTAGCGATCC
FD567130       --> GCACCAACGATGAAACCGATAGCGATTGGAGCAATGGTTCCTAGCGATCC
FD936284       --> GCACCAACGATGAAACCGATAGCGATTGGAGCAATGGTTCCTAGCGATCC
EY902029       --> ..................................................

               451    -    501
UN09576        --> CTTCTTTGGATCAGCAGCTGTGGCGTAAACGGTGTAGACCAAAGCAAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX757040       <-- CTTCTTTGGATCAGCAGCTGTGGCGTAAACGGTGTAGACCAAAGCAAATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW725337       <-- CTTCTTTGGATCAGCAGCTGTGGCGTAAACAGTGTAGACCAAAGCAAATG  Raphanus sativus cv Early Scarlet Globe
EY905640       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD940392       <-- CTTCTTTGGATCAGCAGCTGTGGCGTAAACAGTGTAGACCAAAGCAAATG  Raphanus sativus var. oleiformis
EV535199       <-- CTTCTTTGGATCAGCAGCTGTGGCGTAAACGGTGTAGACCAAAGCAAATG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD562873       <-- CTTCTTTGGATCAGCAGCTGTGGCGTAAACGGTGTAGACCAAAGCAAATG  Raphanus sativus var. oleiformis
FD569542       <-- CTTCTTTGGATCAGCAGCTGTGGCGTAAACAGTGTAGACCAAAGCAAATG  Raphanus sativus cv Early Scarlet Globe
EX887925       <-- CTTCTTTGGATCAGCAGCTGTAGCGTAAACGGTGTAGACCAAAGCAAATG  Raphanus sativus var. oleiformis
FD563509       <-- CTTCTTTGGATCAGCAGCTGTGGCGTAAACGGTGTAGACCAAAGCAAATG  Raphanus sativus var. oleiformis
EW716917       <-- CTTCTTTGGATCAGCAGCTGTGGCGTAAACAGTGTAGACCAAAGCAAATG  Raphanus sativus var. oleiformis
FD542874       <-- CTTCTTTGGATCAGCAGCTGTGGCGTAAACGGTGTAGACCAAAGCAAATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV537810       <-- CTTCTTTGGATCAGCAGCTGTGGCGTAAACGGTGTAGACCAAAGCAAATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV539937       --> CTTCTTTGGATCAGCAGCTGTGGCGTAAACGGTGTAGACCAAAGCAAATG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD566673       --> CTTCTTTGGATCAGCAGCTGTGGCGTAAACGGTGTAGACCAAAGCAAATG  Raphanus sativus var. oleiformis
FD573727       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW730727       --> CTTCTTTGGATCAGCAGCTGTGGCGTAAACAGTGTAGACCAAAGCAAATG  Raphanus sativus cv Early Scarlet Globe
EW721360       --> CTTCTTTGGATCAGCAGCTGTGGCGTAAACAGTGTAGACCAAAGCAAATG  Raphanus sativus var. oleiformis
FD538832       --> CTTCTTTGGATCAGCAGCTGTGGCGTAAACGGTGTAGACCAAAGCAAATG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD567130       --> CTTCTTTGGATCAGCAGCTGTGGCGTAAACGGTGTAGACCAAAGCAAATG  Raphanus sativus var. oleiformis
FD936284       --> CTTCTTTGGATCAGCAGCTGTGGCGTAAACAGTGTAGACCAAAGCAAATG  Raphanus sativus var. oleiformis
EY902029       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               501    -    551
UN09576        --> TCACAACGATCTCCATCACGATACCTTCCAGTGCTCCTAAACCGGCTCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX757040       <-- TCACAACGATCTCCATCACGATACCTTCCAGTGCTCCTAAACCGGCTCCG
EW725337       <-- TCACAACGATCTCCATCACGATACCTTCCAGTGCTCCTAAACCGGCTCCG
EY905640       <-- ..................................................
FD940392       <-- TCACAACGATCTCCATCACGATACCTTCCAGTGCTCCTAAACCGGCTCCG
EV535199       <-- TCACAACGATCTCCATCACGATACCTTCCAGTGCTCCTAAACCGGCTCCG
FD562873       <-- TCACAACGATCTCCATCACGATACCTTCCAGTGCTCCTAAACCGGCTCCG
FD569542       <-- TCACAACGATCTCCATCACGATACCTTCCAGTGCTCCTAAACCGGCTCCG
EX887925       <-- TCACAACGATCTCCATCACGATACCTTCCAGTGCTCCTAAACCGGCTCCG
FD563509       <-- TCACAACGATCTCCATCACGATACCTTCCAGTGCTCCTAAACCGGCTCCG
EW716917       <-- TCACAACGATCTCCATCACGATACCGTCCAGTGCTCCTAAACCGGCTCCG
FD542874       <-- TCACAACGATCTCCATCACGATACCTTCCAGTGCTCCTAAACCGGCTCCG
EV537810       <-- TCACAACGATCTCCATCACGATACCTTCCAGTGCTCCTAAACCGGCTCCG
EV539937       --> TCACAACGATCTCCATCACGATACCTTCCAGTGCTCCTAAACCGGCTCCG
FD566673       --> TCACAACGATCTCCATCACGATACCTTCCAGTGCTCCTAAACCGGCTCCG
FD573727       --> ..................................................
EW730727       --> TCACAACGATCTCCATCACGATACCTTCCAGTGCTCCTAAACCGGCTCCG
EW721360       --> TCACAACGATCTCCATCACGATACCGTCCAGTGCTCCTAAACCGGCTCCG
FD538832       --> TCACAACGATCTCCATCACGATACCTTCCAGTGCTCCTAAACCGGCTCCG
FD567130       --> TCACAACGATCTCCATCACGATACCTTCCAGTGCTCCTAAACCGGCTCCG
FD936284       --> TCACAACGATCTCCATCACGATACCTTCCAGTGCTCCTAAACCGGCTCCG
EY902029       --> ..................................................

               551    -    601
UN09576        --> ACTCCATGGGTCGGTACGCTCTCTCCATTGGTAACAAAGACAAGGAGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX757040       <-- ACTCCATGGGTCGGTACGCTCTCTCCATTGGTAACAAAGACAAGGAGAAG
EW725337       <-- ACTCCATGGGTCGGTACGCTCTCTCCATTGGTAACAAAGACAAGGAGAAG
EY905640       <-- ..................................................
FD940392       <-- ACTCCATGGGTCGGTACGCTCTCTCCATTGGTAACAAAGACAAGGAGAAG
EV535199       <-- ACTCCATGGGTCGGTACGCTCTCTCCATTGGTAACAAAGACAAGGAGAAG
FD562873       <-- ACTCCATGGGTCGGTACGCTCTCTCCATTGGTAACAAAGACAAGGAGAAG
FD569542       <-- ACTCCATGGGTCGGTACGCTCTCTCCATTGGTAACAAAGACAAGGAGAAG
EX887925       <-- ACTCCATGGGTCGGTACGCTCTCTCCATTGGTAACAAAGACAAGGAGAAG
FD563509       <-- ACTCCATGGGTCGGTACGCTCTCTCCATTGGTAACAAAGACAAGGAGAAG
EW716917       <-- ACTCCATGGGTCGGTACGCTCTCTCCATTGGTAACAAAGACAAGGAGAAG
FD542874       <-- ACTCCATGGGTCGGTACGCTCTCTCCATTGGTAACAAAGACAAGGAGAAG
EV537810       <-- ACTCCATGGGTCGGTACGCTCTCTCCATTGGTAACAAAGACAAGGAGAAG
EV539937       --> ACTCCATGGGTCGGTACGCTCTCTCCATTGGTAACAAAGACAAGGAGAAG
FD566673       --> ACTCCATGGGTCGGTACGCTCTCTCCATTGGTAACAAAGACAAGGAGAAG
FD573727       --> ..................................................
EW730727       --> ACTCCATGGGTCGGTACGCTCTCTCCATTGGTAACAAAGACAAGGAGAAG
EW721360       --> ACTCCATGGGTCGGTACGCTCTCTCCATTGGTAACAAAGACAAGGAGAAG
FD538832       --> ACTCCATGGGTCGGTACGCTCTCTCCATTGGTAACAAAGACAAGGAGAA.
FD567130       --> ACTCCATGGGTCGGTACGCTCTCTCCATTGGTAACAAAGACAAGGAGAAG
FD936284       --> ACTCCATGGGTCGGTACGCTCTCTCCATTGGTAACAAAGACAAGGAGAA.
EY902029       --> ..................................................

               601    -    651
UN09576        --> GCAAGCAACGATGGATCCAAGACACTGAGCGATCCAGTATAAGAAACCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX757040       <-- GCAAGCAACGATGGATCCAAGACACTGAGCGATCCAGTATAAGAAACCTG
EW725337       <-- GCAAGCAACGATGGATCCAAGACACTGAGCGATCCAGTATAAGAAACCTG
EY905640       <-- ..................................................
FD940392       <-- GCAAGCAACGATGGATCCAAGACACTGAGCGATCCAGTATAAGAAACCTG
EV535199       <-- GCAAGCAACGATGGATCCAAGACACTGAGCGATCCAGTATAAGAAACCTG
FD562873       <-- GCAAGCAACGATGGATCCAAGACACTGAGCGATCCAGTATAAGAAACCTG
FD569542       <-- GCAAGCAACGATGGATCCAAGACACTGAGCGATCCAGTATAAGAAACCTG
EX887925       <-- GCAAGCAACGATGGATCCAAGACACTGAGCGATCCAGTATAAGAAACCTG
FD563509       <-- GCAAGCAACGATGGATCCAAGACACTGAGCGATCCAGTATAAGAAACCTG
EW716917       <-- GCAAGCAACGATGGATCCAAGACACTGAGCGATCCAGTATAAGAAACCTG
FD542874       <-- GCAAGCAACGATGGATCCAAGACACTGAGCGATCCAGTATAAGAAACCTG
EV537810       <-- GCAAGCAACGATGGATCCAAGACACTGAGCGATCCAGTATAAGAAACCTG
EV539937       --> GCAAGCAACGATGGATCCAAGACACTGAGCGATCCAGTATAAGAAACCTG
FD566673       --> GCAAGCAACGATGGATCCAAGACACTGAGCGATCCAGTATAAGAAACCTG
FD573727       --> ..................................................
EW730727       --> GCAAGCAACGATGGATCCAAGACACTGAGCGATCCAGTATAAGAAACCTG
EW721360       --> GCAAGCAACGATGGATCCAAGACACTGAGCGATCCAGTATAAGAAACCTG
FD538832       --> ..................................................
FD567130       --> GCAAGCAACGATGGATCCAAGACACTGAGCGATCCAGTATAAGAAACCTG
FD936284       --> ..................................................
EY902029       --> ..................................................

               651    -    701
UN09576        --> TGATCAGTGTTATGTTTCCTCCAACGGCAAGACCGAGAGTCACGGCAGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX757040       <-- c.................................................
EW725337       <-- TGATCAGTGTTc......................................
EY905640       <-- ..................................................
FD940392       <-- TGATCAGTGTTATGTTTCCTCCAACGGCAAGACCGAGAGTCACGGCAGGG
EV535199       <-- TGATCAGTGTTATGTTTCCTCCAACGGCAAGACCGAGAGTCACGGCAGGG
FD562873       <-- TGATCAGTGTTATGTTTCCTCCAACGGCAAGACCGAGAGTCACGGCAGGG
FD569542       <-- TGATCAGTGTTATGTTTCCTCCAACGGCAAGACCGAGAGTCACGGCAGGG
EX887925       <-- TGATCAGTGTTATGTTTCCTCCAACGGCAAGACCGAGAGTCACGGCAGGG
FD563509       <-- TGATCAGTGTTATGTTTCCTCCAACGACAAGACCGAGAGTCACGGCAGGG
EW716917       <-- TGATCAGTGTTATGTTTCCTCCAACGGCAAGACCGAGAGTCACGGCAGGG
FD542874       <-- TGATCAGTGTTATGTTTCCTCCAACGGCAAGACCGAGAGTCACGGCAGGG
EV537810       <-- TGATCAGTGTTATGTTTCCTCCAACGGCAAGACCGAGAGTCACGGCAGGG
EV539937       --> TGATCAGTGTTATGTTTCCTCCAACGGCAAGACCGAGAGTCACGGCAGGG
FD566673       --> TGATCAGTGTTATGTTTCCTCCAACGGCAAGACCGAGAGTCACGGCAGGG
FD573727       --> ..................................................
EW730727       --> TGATCAGTGTTc......................................
EW721360       --> TGATCAGTGTTATGTTTCCTCCAACGGCAAGACCGAGAGTCACGGCAGG.
FD538832       --> ..................................................
FD567130       --> TGATCAGTGTTATGTTTCCTCCAACGACAAGACCGAGAGTCACGGCAGGG
FD936284       --> ..................................................
EY902029       --> ..................................................

               701    -    751
UN09576        --> TTAAGG-TGCCCACCAGAGATGTTAGCAGCAACCGAAACCCCAACAAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX757040       <-- ..................................................
EW725337       <-- ..................................................
EY905640       <-- ..................................................
FD940392       <-- TTAAGG-TGCCCACCAGAGATGTTAGCAGCAACCGAAACCCCAACAAACA
EV535199       <-- TTAAGG-TGCCCACCAGAGATGTTAGCAGCAACCGAAACCCCAACAAACA
FD562873       <-- TTAAGG-TGCCCACCAGAGATGTTAGCAGCAACCGAAACCCCAACAAACA
FD569542       <-- TTAAGG-TGCCCACCAGAGATGTTAGCAGCAACCGAAACCCCAACAAACA
EX887925       <-- TTAAGG-TGCCCACCAGAGATGTTAGCAGCAACCGAAACCCCAACAAACA
FD563509       <-- TTAAGG-TGCCCACCAGAGATGTTAGCAGCAACCGAAACCCCAACAAACA
EW716917       <-- TTAAGG-TGCCCACCAGAGATGTTAGCAGCAACCGAAACCCCAACAAACA
FD542874       <-- TTAAGG-TGCCCACCAGAGATGTTAGCAGCAACCGAAACCCCAACAAACA
EV537810       <-- TTAAGG-TGCCC......................................
EV539937       --> TTAAGGGTGCCCACCAGAGATGTTAGCAGCAACCGAAACCCCAACAAACA
FD566673       --> TTAAGG-TGCCCACCAGAGATGTTAGCAGCAACCGAAACCCCAACAAACA
FD573727       --> ..................................................
EW730727       --> ..................................................
EW721360       --> ..................................................
FD538832       --> ..................................................
FD567130       --> TTAAGG-TGCCCACCAGAGATGTTAGCAGCAACCGAAACCCCAACAAACA
FD936284       --> ..................................................
EY902029       --> ..................................................

               751    -    801
UN09576        --> AGGCAAACGCGTGAGCCACCGCAATAGCCACAAGACCAGCTGGGTCCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX757040       <-- ..................................................
EW725337       <-- ..................................................
EY905640       <-- ..................................................
FD940392       <-- AGGCAAACGCGTGAGCCACCGCAATAGCCACAAGACCAGCTGGGTCCAAG
EV535199       <-- AGGCAAATGCGTGAGCCACCGCAATAGCCACAAGACCAGCTGGGTCCAAG
FD562873       <-- AGGCAAACGCGTGAGCCACCGCAACAGCCACAAGACCAGCTGGGTCCAAG
FD569542       <-- AGGCAAACGCGTGAGCCACCGCAATAGCCACAAGACCAGCTGGGTCCAAG
EX887925       <-- AGGCAAACGCGTGAGCCACCGCAACAGCCACAAGACCAGCTGGGTCCAAG
FD563509       <-- AGGCAAACGCGTGAGCCACCGCAACAGCCACAAGACCAGCTGGGTCCAAG
EW716917       <-- AGGCAAACGCGTGAGCCACCGCAATAGCCACAAGACCAGCTGGGTCCAAG
FD542874       <-- AGGCAAATGCGTGAGCCACCGCAATAGCCACAAGACCAGCTGGGTCCAAG
EV537810       <-- ..................................................
EV539937       --> AGGCAAATGCGTGAGCCACCGCAATAGCCACAAGACCAGCTGGGTC....
FD566673       --> AGGCAAACGCGTGAGCCACCGCAACAGCCACAAGACCAGCTGGGTC....
FD573727       --> ..................................................
EW730727       --> ..................................................
EW721360       --> ..................................................
FD538832       --> ..................................................
FD567130       --> AGGCAAACGCGTGAGCCACCGCAACAGCCACAAGACCAGCTGGGTCCAAG
FD936284       --> ..................................................
EY902029       --> ..................................................

               801    -    851
UN09576        --> GCGGCATCGGATGTTAGCTTGCCAAAAGCGATAGCTGAGCCAACGCCAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX757040       <-- ..................................................
EW725337       <-- ..................................................
EY905640       <-- ..................................................
FD940392       <-- GCGGCATCGGATGTTAGCTTGCCAAAAGCGATAGCTGAGCCAACGCCAGC
EV535199       <-- GCGGCATCGGATGTTAGCTTGCCAAAAGCGATAGCTGAGCCAACGCCAGC
FD562873       <-- GCGGCATCGGATGTTAGCTTGCCAAAAGCGATAGCTGAGCCAACGCCAGC
FD569542       <-- GCGGCATCGGATGTTAGCTTGCCAAAAGCGATAGCTGAGCCAACGCCAGC
EX887925       <-- GCGGCATCGGATGTTAGCTTGCCAAAAGCGATAGCT..............
FD563509       <-- GCGGCATCGGATGTTAGCTTGCCAAAAGCGATAGCTGAGCCAACGCCAGC
EW716917       <-- GCGGCATCGGATGTTAGCTTGCCAAAAGCGATAGCTGAGCCAACGCCAGC
FD542874       <-- GCGGCATCGGATGTTAGCTTGCCAAAAGCGATAGCTGAGCCAACGCCAGC
EV537810       <-- ..................................................
EV539937       --> ..................................................
FD566673       --> ..................................................
FD573727       --> ..................................................
EW730727       --> ..................................................
EW721360       --> ..................................................
FD538832       --> ..................................................
FD567130       --> GCGGCATCGGATGTTAGCTTGCCAAA-GCGATAGCTGAGCCAACGCCAGC
FD936284       --> ..................................................
EY902029       --> ..................................................

               851    -    901
UN09576        --> GAATACAAAGATAAAAGTTGCGATAAACTCAGACAAGTAAGCCTTTAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX757040       <-- ..................................................
EW725337       <-- ..................................................
EY905640       <-- ..................................................
FD940392       <-- GAATACAAAGATAAAAGTTGCGATAAACTCAGACAAGTAAGCCTTTAGAG
EV535199       <-- GAATACAAAGATAAAAGTTGCGATAAACTCAGACAAGTAAGCCTTTAGAG
FD562873       <-- GAATACAAAGATAAAAGTTGCGATAAACTCAGACAAGTAAGCCTTTAGAG
FD569542       <-- GAATACAAAGATAAAAGTTGCGATAAACTCAGACAAGTAAGCCTTTAGAG
EX887925       <-- ..................................................
FD563509       <-- GAATACAAAGATAAAAGTTGCGATAAACTCAGACAAGTAAGCCTTTAGAG
EW716917       <-- GAATACAAAGATAAAAGTTGCGATAAACTCAGACAAGTAAGCCTTTAGAG
FD542874       <-- GAATACAAAGATAAAAGTTGCGATAAACTCAGACAAGTAAGCCTTTAGAG
EV537810       <-- ..................................................
EV539937       --> ..................................................
FD566673       --> ..................................................
FD573727       --> ..................................................
EW730727       --> ..................................................
EW721360       --> ..................................................
FD538832       --> ..................................................
FD567130       --> GAATACAA-GATAAAAGTTGCGATAAA.......................
FD936284       --> ..................................................
EY902029       --> ..................................................

               901    -    951
UN09576        --> ATGCAACGCTGAACGAGTCACCCACACTTCCAACTTCGATCTTCACCATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX757040       <-- ..................................................
EW725337       <-- ..................................................
EY905640       <-- ..................................................
FD940392       <-- ATGCAACGCTGAACGAGTCACCCACACTTCCAACTTCGATCTTCACCATG
EV535199       <-- ATGCAACGCTGAACGAGTCACCCACACTTCCAACTTCGATCTTCCCCATG
FD562873       <-- ATGCAACGCTGAACGAGTCACCCACACTTCCAACTTCGATCTTCACCATG
FD569542       <-- ATGCAACGCTGAACGAGTCACCCACACTTCCAACTTCGATCTTCACCATG
EX887925       <-- ..................................................
FD563509       <-- ATGCAACGCTGAACGAGTCACCCACACTTCCAACTTCGATCTTCACCATG
EW716917       <-- ATGCAACGCTGAACGAGTCACCCACACTTCCAACTTCGATCTTCACCATG
FD542874       <-- ATGCAACGCTGAACGAGTCACCCACACTTCCAACTTCGATCTTCACCATG
EV537810       <-- ..................................................
EV539937       --> ..................................................
FD566673       --> ..................................................
FD573727       --> ..................................................
EW730727       --> ..................................................
EW721360       --> ..................................................
FD538832       --> ..................................................
FD567130       --> ..................................................
FD936284       --> ..................................................
EY902029       --> ..................................................

               951    -   1001
UN09576        --> TTTTTTTTTACTCCAAGAATTTGGTTGTTAACACTTTTTTCCTGTTATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX757040       <-- ..................................................
EW725337       <-- ..................................................
EY905640       <-- ..................................................
FD940392       <-- TTTTTTTTTACTCCAAGAATTTcc..........................
EV535199       <-- TTTTTTTTTACTCCAAGAATTTGGTTGTTAACACTTTTTTttcctcc...
FD562873       <-- TTTTTTTTTACTCCAAGAATTTGGTTGTTAACACTTTTTTCCTGTTATTC
FD569542       <-- TTTTTTTTTACTCCAAGAATTTGGTcc.......................
EX887925       <-- ..................................................
FD563509       <-- TTTTTTTT-ACTCCAAGAATTTGGTTGTTAACACTTTTTTCCTGTTATTC
EW716917       <-- TTTTTTTTTACTCCAAGAATTTGGTTcc......................
FD542874       <-- TTTTTTTTTACTCCAAGAATTTGGTTGTTAACACTTTTTTttcctgtcc.
EV537810       <-- ..................................................
EV539937       --> ..................................................
FD566673       --> ..................................................
FD573727       --> ..................................................
EW730727       --> ..................................................
EW721360       --> ..................................................
FD538832       --> ..................................................
FD567130       --> ..................................................
FD936284       --> ..................................................
EY902029       --> ..................................................

               1001   -   1051
UN09576        --> TCCCT
                   ~~~~~
EX757040       <-- .....
EW725337       <-- .....
EY905640       <-- .....
FD940392       <-- .....
EV535199       <-- .....
FD562873       <-- TCC..
FD569542       <-- .....
EX887925       <-- .....
FD563509       <-- TCCCT
EW716917       <-- .....
FD542874       <-- .....
EV537810       <-- .....
EV539937       --> .....
FD566673       --> .....
FD573727       --> .....
EW730727       --> .....
EW721360       --> .....
FD538832       --> .....
FD567130       --> .....
FD936284       --> .....
EY902029       --> .....