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Alignment for radish unigene UN09584

               1      -     51
UN09584        --> AGTCAGAACCAGATGAGTATATACGCAATAAATACATGTTAAGATAAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527242       <-- ................................TACATGTTAAGATAAAAT
EY914484       <-- .................................ACATGTTAAGATAAAAT
FD988788       <-- ..................................................
FD569924       <-- ..................................................
FD556164       <-- ..................................................
EX905522       <-- ..................................................
FD569709       <-- ..................................................
EV569807       <-- ..................................................
FD558672       <-- ..................................................
EW723133       <-- ..................................................
EY907727       <-- ..................................................
EV531543       --> AGTCAGAACCAGATGAGTATATACGCAATAAATACATGTTAAGATAAAAT
FD984646       --> gGTCAGAACCACATGAGCATATACGCAATAAATACATGTTAAGATAAAAT
FD573861       --> ......................ACGCAATAAATACATGTTAAGATAAAAT
EW719002       --> .......................CGCAATAAATACATGTTAAGATAAAAT
EY910521       --> .................................ACATGTTAAGATAAAAT
EW728149       --> ..................................................
FD574028       --> ..................................................
EX909219       --> ..................................................
EY903594       --> ..................................................
EV574259       --> ..................................................
FD554526       --> ..................................................

               51     -    101
UN09584        --> TAAACCAAAACACACAAAATTAATCAGGAAACCATGCAAAAGAGGAAGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527242       <-- TAAACCAAAACACACAAAATTAATCAGGAAACCATGCAAAAGAGGAAGGT
EY914484       <-- TAAACCAAAACACACAAAATTAATCAGGAAACCATGCAAAAGAGGAAGGT
FD988788       <-- TAAACCAAAACACACAAAATTA-TCAGGGAACCATGCAAAAGAGGAAGGT
FD569924       <-- ................tttttatttttttAACCATGCAAAAGAGGAAGGT
FD556164       <-- ...........................................GGAAGGT
EX905522       <-- ..................................................
FD569709       <-- ..................................................
EV569807       <-- ..................................................
FD558672       <-- ..................................................
EW723133       <-- ..................................................
EY907727       <-- ..................................................
EV531543       --> TAAACCAAAACACACAAAATTAATCAGGAAACCATGCAAAAGAGGAAGGT
FD984646       --> TAAACCAAAACACACAAAATTAATCAGGGAACCATGCAAAAGAGGAAGGT
FD573861       --> TAAACCAAAACACACAAAATTAATCAGGAAACCATGCAAAAGAGGAAGGT
EW719002       --> TAAACCAAAACACACAAAATTAATCAGGAAACCATGCAAAAGAGGAAGGT
EY910521       --> TAAACCAAAACACACAAAATTAATCAGGAAACCATGCAAAAGAGGAAGGT
EW728149       --> ...ACCAAAACACACAAAATTAATCGGGAAACCATGCAAAAGAGGAAGGT
FD574028       --> .............................AACCATGCAAAAAAGGAAGGT
EX909219       --> ...........................................GGAAGGT
EY903594       --> ..................................................
EV574259       --> ..................................................
FD554526       --> ..................................................

               101    -    151
UN09584        --> TTCACATTCTTTTAAACTTTGCTAAAGTAGAAACGCCAAAAATTAAATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527242       <-- T-CACATTCTTTTAAACATTGCTAAAGTAGAAACGCCAAAAATTAAATTA  Raphanus raphanistrum subsp. maritimus
EY914484       <-- TTCACATTCTTTTAAACTTTGCTAAAGTAGAAACGCCAAAAATTAAATTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD988788       <-- TTCACATTCTTTTAAACTTTGCTAAAGTAGAAACGCCAAAAATTAAATTA  Raphanus raphanistrum subsp. landra
FD569924       <-- TTCACATTCTTTTAAACTTTGCTAAAGTAGAAACGCCAAAAATTAAATTA  Raphanus sativus cv Early Scarlet Globe
FD556164       <-- TTCACATTCTTTTAAACTTTGCTAAAGTAGAAACGCCAAAAATTAAATTA  Raphanus raphanistrum subsp. landra
EX905522       <-- TTCACATTCTTTTAAACTTTGCTAAAGTAGAAACGCCAAAAATTAAATTA  Raphanus sativus cv Rat-Tail Radish #3870
FD569709       <-- ..CACATTCTTTTAAACTTTGCTAAAGTAGAAACGCCAAAAATTAAATTA  Raphanus sativus cv Early Scarlet Globe
EV569807       <-- .............AAACTT-GCTAAAGTAGAAACGCCAAAAATTAAATTA  Raphanus raphanistrum subsp. landra
FD558672       <-- ................CTTTGCTAAAGTAGAAACGCCAAAAATTAAATTA  Raphanus raphanistrum subsp. landra
EW723133       <-- ...............................AACGCCAAAAATTAAATTA  Raphanus sativus cv Early Scarlet Globe
EY907727       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV531543       --> T-CACATTCTTTTAAACATTGCTAAAGTAGAAACGCCAAAAATTAAATTA  Raphanus raphanistrum subsp. maritimus
FD984646       --> TTCACATTCTTTTAAACTTTGCTAAAGTAGAAACGCCAAAAATTAAATTA  Raphanus raphanistrum subsp. landra
FD573861       --> TTCACATTCTTTTAAACTTTGCTAAAGTAAAAACGCCAAAAATTAAATTA  Raphanus sativus cv Early Scarlet Globe
EW719002       --> T-CACATTCTTTTAAACTTTGCTAAAGTAGAAACGCCAAAAATTAAATTA  Raphanus sativus var. oleiformis
EY910521       --> TTCACATTCTTTTAAACTTTGCTAAAGTAGAAACGCCAAAAATTAAATTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW728149       --> TTCACATTCTTTTAAACTTTGCTAAAGTAGAAACGCCAAAAATTAAATTA  Raphanus sativus cv Early Scarlet Globe
FD574028       --> TTCACATTCTTTTAAACTTTGCTAAAGTAGAAACGCCAAAAATTAAATTA  Raphanus sativus cv Early Scarlet Globe
EX909219       --> T-CACATTCTTTTAAACTTTGCTAAAGTAGAAACGCCAAAAATTAAATTA  Raphanus sativus cv Rat-Tail Radish #3870
EY903594       --> .................................................A  Raphanus raphanistrum subsp. raphanistrum (MS)
EV574259       --> ..................................................  Raphanus raphanistrum subsp. landra
FD554526       --> ..................................................  Raphanus raphanistrum subsp. landra

               151    -    201
UN09584        --> GGAAAACATAAAA-CCCATGCACCCAGCCAAAAGTAAAAGTGAAACAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527242       <-- GGAAAACATAAAA-CCCATGCACCCAGCCAAAAATAAAAGTGAAACAATG  Raphanus raphanistrum subsp. maritimus
EY914484       <-- GGAAAACATAAAA-CCCATGCACCCAGCCAAAAGTAAAAGTGAAACAATG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD988788       <-- GGAAAACATAAAA-CCCATGCACCCAGCCAAAAGTAAAAGTGAAACAATG  Raphanus raphanistrum subsp. landra
FD569924       <-- GGAAAACATAAAA-CCCATGCACCCAGCCAAAAGTAAAAGTGAAACAATG  Raphanus sativus cv Early Scarlet Globe
FD556164       <-- GGAAAACATAAAAACCCATGCACCCAGCCAAAAGTAAAAGTGAAACAATG  Raphanus raphanistrum subsp. landra
EX905522       <-- GGAAAACATAAAA-CCCATGCACCCAGCCAAAAATAAAAGTGAAACAATG  Raphanus sativus cv Rat-Tail Radish #3870
FD569709       <-- GGAAAACATAAAA-CCCATGCACCCAGCCAAAAGTAAAAGTGAAACAATG  Raphanus sativus cv Early Scarlet Globe
EV569807       <-- GGAAAACATAAAA-CCCATGCACCCAGCCAAAAGTAAAAGTGAAACAATG  Raphanus raphanistrum subsp. landra
FD558672       <-- GGAAAACATAAAA-CCCATGCACCCAGCCAAAAGTAAAAGTGAAACAATG  Raphanus raphanistrum subsp. landra
EW723133       <-- GGAAAACATAAAA-CCCATGCACCCAGCCAAAAGTAAAAGTGAAACAATG  Raphanus sativus cv Early Scarlet Globe
EY907727       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV531543       --> GGAAAACATAAAA-CCCATGCACCCAGCCAAAAATAAAAGTGAAACAATG  Raphanus raphanistrum subsp. maritimus
FD984646       --> GGAAAACATAAAA-CCCATGCACCCAGCCAAAAGTAAAAGTGAAACAATG  Raphanus raphanistrum subsp. landra
FD573861       --> GGAAAACATAAAA-CCCATGCACCCAGCCAAAAGTAAAAGTGAAACAATG  Raphanus sativus cv Early Scarlet Globe
EW719002       --> GGAAAACATAAAA-CCCATGCACCCAGCCAAAAATAAAAGTGAAACAATG  Raphanus sativus var. oleiformis
EY910521       --> GGAAAACATAAAA-CCCATGCACCCAGCCAAAAGTAAAAGTGAAACAATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW728149       --> GGAAAACATAAAA-CCCATGCACCCAGCCAAAAGTAAAAGTGAAACAATG  Raphanus sativus cv Early Scarlet Globe
FD574028       --> GGAAAACATAAAA-CCCATGCACCCAGCCAAAAGTAAAAGTGAAACAATG  Raphanus sativus cv Early Scarlet Globe
EX909219       --> GGAAAACATAAAA-CCCATGCACCCAGCCAAAAATAAAAGTGAAACAATG  Raphanus sativus cv Rat-Tail Radish #3870
EY903594       --> GGAAAACATAAAA-CCCATGCACCCAGCCAAAAATAAAAGTGAAACAATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV574259       --> ..................................................  Raphanus raphanistrum subsp. landra
FD554526       --> ..................................................  Raphanus raphanistrum subsp. landra

               201    -    251
UN09584        --> GTTCAAAGGATTGGAACAACATCAA-TATAGCATTCTATAAGGTTTCAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527242       <-- GTTCAAAGGATTGGAACAACATCAT-TATAGCATTCTATAAGGTTTTAGA  Raphanus raphanistrum subsp. maritimus
EY914484       <-- GTTCAAAGGATTGGAACAACATCAA-TATAGCATTCTATAAGGTTTCAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD988788       <-- GTCCAAAGGATTGGAACAACATCAA-TATAGCATTCTATAAGGTTTCAGA  Raphanus raphanistrum subsp. landra
FD569924       <-- GTTCAAAGGATTGGAACAACATCAA-TATAGCATTCTATAAGGTTTCAGA  Raphanus sativus cv Early Scarlet Globe
FD556164       <-- GTTCAAAGGATTGGAACAACATCAA-TATAGCATTCTATAAGGTTTCAGA  Raphanus raphanistrum subsp. landra
EX905522       <-- GTTCAAAGGATTGGAACAACATCAT-TATAGCATTCTATAAGGTTTTAGA  Raphanus sativus cv Rat-Tail Radish #3870
FD569709       <-- GTTCAAAGGATTGGAACAACATCAA-TATAGCATTCTATAAGGTTTCAGA  Raphanus sativus cv Early Scarlet Globe
EV569807       <-- GTTCAAAGGATTGGAACAACATCAAATATAGCATTCTATAAGGTTTCAGA  Raphanus raphanistrum subsp. landra
FD558672       <-- GTTCAAAGGATTGGAACAACATCAA-TATAGCATTCTATAAGGTTTCAGA  Raphanus raphanistrum subsp. landra
EW723133       <-- GTTCAAAGGATTGGAACAACATCAA-TATAGCATTCTATAAGGTTTCAGA  Raphanus sativus cv Early Scarlet Globe
EY907727       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV531543       --> GTTCAAAGGATTGGAACAACATCAT-TATAGCATTCTATAAGGTTTTAGA  Raphanus raphanistrum subsp. maritimus
FD984646       --> GTCCAAAGGATTGGAACAACATCAA-TATAGCATTCTATAAGGTTTCAGA  Raphanus raphanistrum subsp. landra
FD573861       --> GTTCAAAGGATTGGAACAACATCAA-TATAGCATTCTATAAGGTTTCAAA  Raphanus sativus cv Early Scarlet Globe
EW719002       --> GTTCAAAGGATTGGAACAACATCAT-TATAGCATTCTATAAGGTTTTAGA  Raphanus sativus var. oleiformis
EY910521       --> GTTCAAAGGATTGGAACAACATCAA-TATAGCATTCTATAAGGTTTCAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW728149       --> GTTCAAAGGATTGGAACAACATCAA-TATAGCATTCTATAAGGTTTCAGA  Raphanus sativus cv Early Scarlet Globe
FD574028       --> GTTCAAAGGATTGGAACAACATCAA-TATAGCATTCTATAAGGTTTCAAA  Raphanus sativus cv Early Scarlet Globe
EX909219       --> GTTCAAAGGATTGGAACAACATCAT-TATAGCATTCTATAAGGTTTTAGA  Raphanus sativus cv Rat-Tail Radish #3870
EY903594       --> GTTCAAAGGATTGGAACAACATCAA-TATAGCATTCTATAAGGTTTCAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV574259       --> ..................................................  Raphanus raphanistrum subsp. landra
FD554526       --> ..................................................  Raphanus raphanistrum subsp. landra

               251    -    301
UN09584        --> GATCCTGTTCGACCAAGTAATCACCCAGCCTCTCGACGACCATGTTACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527242       <-- GATCCTGTTCGATCAAGTAATCACCCAGCCTCTCGACGACCATGTTACAT  Raphanus raphanistrum subsp. maritimus
EY914484       <-- GATCCTGTTCGACCAAGTAATCACCCAGCCTCTCGACGACCATGTTACAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD988788       <-- GATCCTGTTCGACCAAGTAATCACCCAGCCTCTCGACGACCATGTTAAAT  Raphanus raphanistrum subsp. landra
FD569924       <-- GATCCTGTTCGACCAAGTAATCACCCAGCCTCTCGACGACCATGTTACAT  Raphanus sativus cv Early Scarlet Globe
FD556164       <-- GATCCTGTTCGACCAAGTAATCACCCAGCCTCTCGACGACCATGTTACAT  Raphanus raphanistrum subsp. landra
EX905522       <-- GATCCTGTTCGATCAAGTAATCACCCAGCCTCTCGACGACCATGTTACAT  Raphanus sativus cv Rat-Tail Radish #3870
FD569709       <-- GATCCTGTTCGACCAAGTAATCACCCAGCCTCTCGACGACCATGTTACAT  Raphanus sativus cv Early Scarlet Globe
EV569807       <-- GATCCTGTTCGACCAAGTAATCACCCAGCCTCTCGACGACCATGTTACAT  Raphanus raphanistrum subsp. landra
FD558672       <-- GATCCTGTTCGACCAAGTAATCACCCAGCCTCTCGACGACCATGTTACAT  Raphanus raphanistrum subsp. landra
EW723133       <-- GATCCTGTTCGACCAAGTAATCACCCAGCCTCTCGACGACCATGTTACAT  Raphanus sativus cv Early Scarlet Globe
EY907727       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV531543       --> GATCCTGTTCGATCAAGTAATCACCCAGCCTCTCGACGACCATGTTACAT  Raphanus raphanistrum subsp. maritimus
FD984646       --> AATCCTGTTCGACCAAGTAATCACCCAGCCTCTCGACGACCATGTTAAAT  Raphanus raphanistrum subsp. landra
FD573861       --> AATCCTGTTCGACCAAGTAATCACCCAGCCTCTCGACGACCATGTTACAT  Raphanus sativus cv Early Scarlet Globe
EW719002       --> GATCCTGTTCGATCAAGTAATCACCCAGCCTCTCGACGACCATGTTACAT  Raphanus sativus var. oleiformis
EY910521       --> GATCCTGTTCGACCAAGTAATCACCCAGCCTCTCGACGACCATGTTACAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW728149       --> GATCCTGTTCGACCAAGTAATCACCCAGCCTCTCGACGACCATGTTACAT  Raphanus sativus cv Early Scarlet Globe
FD574028       --> AATCCTGTTCGACCAAGTAATCACCCAGCCTCTCGACGACCATGTTACAT  Raphanus sativus cv Early Scarlet Globe
EX909219       --> GATCCTGTTCGATCAAGTAATCACCCAGCCTCTCGACGACCATGTTACAT  Raphanus sativus cv Rat-Tail Radish #3870
EY903594       --> AATCCTGTTCGACCAAGTAATCACCCAGCCTCTCGACGACCATGTTACAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV574259       --> ..................................................  Raphanus raphanistrum subsp. landra
FD554526       --> ..................................................  Raphanus raphanistrum subsp. landra

               301    -    351
UN09584        --> TGTCCTGGAGTCACTGGTTCTTCGTACAGACCAAACACCATTGACTGTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527242       <-- TGTCCTGGAGTCACTGGTTCTTCGTACAGACCAAACACCATTGACTGTCC
EY914484       <-- TGTCCTGGAGTCACTGGTTCTTCGTACAGACCAAACACCATTGACTGTCC
FD988788       <-- TGTCCTGGAGTCACTGGTTCTTCGTACAGACCAAACACCATTGACTGTCC
FD569924       <-- TGTCCTGGAGTCACTGGTTCTTCGTACAGACCAAACACCATTGACTGTCC
FD556164       <-- TGTCATGGAGTCACTGGTTCTTCGTACAGACCAAACACCATTGACTGTCC
EX905522       <-- TGTCCTGGAGTCACTGGTTCTTCGTACAGACCAAACACCATTGACTGTCC
FD569709       <-- TGTCCTGGAGTCACTGGTTCTTCGTACAGACCAAACACCATTGACTGTCC
EV569807       <-- TGTCCTGGAGTCACTGGTTCTTCGTACAGACCAAACACCATTGACTGTCC
FD558672       <-- TGTCCTGGAGTCACTGGTTCTTCGTACAGACCAAACACCATTGACTGTCC
EW723133       <-- TGTCCTGGAGTCACTGGTTCTTCGTACAGACCAAACACCATTGACTGTCC
EY907727       <-- ..................................................
EV531543       --> TGTCCTGGAGTCACTGGTTCTTCGTACAGACCAAACACCATTGACTGTCC
FD984646       --> TGTCCTGGAGTCACTGGTTCTTCGTACAGACCAAACACCATTGACTGTCC
FD573861       --> TGTCCTGGAGTCACTGGTTCTTCGTACAGACCAAACACCATTGACTGTCC
EW719002       --> TGTCCTGGAGTCACTGGTTCTTCGTACAGACCAAACACCATTGACTGTCC
EY910521       --> TGTCCTGGAGTCACTGGTTCTTCGTACAGACCAAACACCATTGACTGTCC
EW728149       --> TGTCCTGGAGTCACTGGTTCTTCGTACAGACCAAACACCATTGACTGTCC
FD574028       --> TGTCCTGGAGTCACTGGTTCTTCGTACAGACCAAACACCATTGACTGTCC
EX909219       --> TGTCCTGGAGTCACTGGTTCTTCGTACAGACCAAACACCATTGACTGTCC
EY903594       --> TGTCCTGGAGTCACTGGTTCTTCGTACAGACCAAACACCATTGACTGTCC
EV574259       --> ..................................................
FD554526       --> ..................................................

               351    -    401
UN09584        --> TGTCTTTTTGATTGTGATTCCTCCAGCCCCCTTTTTGCCACGAATGACTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527242       <-- TGTCTTTTTGATTGTGATTCCTCCAACCCCCTTTTTGCCGCGAATGACTG
EY914484       <-- TGTCTTTTTGATTGTGATTACTCCAGCCCCCTTTTTGCCACGAATGACTG
FD988788       <-- TGTCTTTTTGATTGTGATTCCTCCAGCCCCCTTTTTGCCACGAATGACTG
FD569924       <-- TGTCTTTTTGATTGTGATTCCTCCAGCCCCCTTTTTGCCACGAATGACTG
FD556164       <-- TGTCTTTTTGATTGTGATTCCTCCAGCCCCCTTTTTGCCACGAATGACTG
EX905522       <-- TGTCTTTTTGATTGTGATTCCTCCAGCCCCCTTTTTGCCACGAATGACTG
FD569709       <-- TGTCTTTTTGATTGTGATTCCTCCAGCCCCCTTTTTGCCACGAATGACTG
EV569807       <-- TGTCTTTTTGATTGTGATTCCTCCAGCCCCCTTTTTGCCACGAATGACTG
FD558672       <-- TGTCTTTTTGATTGTGATTCCTCCAGCCCCCTTTTTGCCACGAATGACTG
EW723133       <-- TGTCTTTTTGATTGTGATTCCTCCAGCCCCCTTTTTGCCACGAATGACTG
EY907727       <-- ....TTTTTGATTGTGATTCCTCCAGCCCCCTTTTTGCCACGAATGA-TG
EV531543       --> TGTCTTTTTGATTGTGATTCCTCCAACCCCCTTTTTGCCGCGAATGACTG
FD984646       --> TGTCTTTTTGATTGTGATTCCTCCAGCCCCCTTTTTGCCACGAATGACTG
FD573861       --> TGTCTTTTTGATTGTGATTCCTCCAGCCCCCTTTTTGCCACGAATGACTG
EW719002       --> TGTCTTTTTGATTGTGATTCCTCCAGCCCCCTTTTTGCCACGAATGACTG
EY910521       --> TGTCTTTTTGATTGTGATTACTCCAGCCCCCTTTTTGCCACGAATGACTG
EW728149       --> TGTCTTTTTGATTGTGATTCCTCCAGCCCCCTTTTTGCCACGAATGACTG
FD574028       --> TGTCTTTTTGATTGTGATTCCTCCAGCCCCCTTTTTGCCACGAATGACTG
EX909219       --> TGTCTTTTTGATTGTGATTCCTCCAGCCCCCTTTTTGCCACGAATGACTG
EY903594       --> TGTCTTTTTGATTGTGATTCCTCCAGCCCCCTTTTTGCCACGAATGACTG
EV574259       --> .........GATTGTGATTCCTCCAGCCCCCTTTTTGCCACGAATGACTG
FD554526       --> ...............................................CTG

               401    -    451
UN09584        --> CACCAGGCTCGCCTTGGATAACCATATACTTAAGTCCTGCGAGGAACAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527242       <-- CACCAGGCTCGCCTTGGATAACCATATACTTAAGTCCTGCGAGGAACAAG
EY914484       <-- CACCAGGCTCGCCTTGGATAACCATATACTTAAGTCCTGCGAGGAACAAG
FD988788       <-- CACCAGGCTCGCCTTGGATAACCATATACTTAAGTCCCGCGAGGAACAAG
FD569924       <-- CACCAGGCTCGCCTTGGATAACCATATACTTAAGTCCTGCGAGGAACAAG
FD556164       <-- CACCAGGCTCGCCTTGGATAACCATATACTTAAGTCCTGCGAGGAACAAG
EX905522       <-- CACCAGGCTCGCCTTGGATAACCATATACTTAAGTCCTGCGAGGAACAAG
FD569709       <-- CACCAGGCTCGCCTTGGATAACCATATACTTAAGTCCTGCGAGGAACAAG
EV569807       <-- CACCAGGCTCGCCTTGGATAACCATATACTTAAGTCCTGCGAGGAACAAG
FD558672       <-- CACCAGGCTCGCCTTGGATAACCATATACTTAAGTCCTGCGAGGAACAAG
EW723133       <-- CACCAGGCTCGCCTTGGATAACCATATACTTAAGTCCTGCGAGGAACAAG
EY907727       <-- CACCAGGCTCGCCTTGGATAACCATATACTTAAGTCCTGCGAGGAACAAG
EV531543       --> CACCAGGCTCGCCTTGGATAACCATATACTTAAGTCCTGCGAGGAACAAG
FD984646       --> CACCAGGCTCGCCTTGGATAACCATATACTTAAGTCCCGCGAGGAACAAG
FD573861       --> CACCAGGCTCGCCTTGGATAACCATATACTTAAGTCCTGCGAGGAACAAG
EW719002       --> CACCAGGCTCGCCTTGGATAACCATATACTTAAGTCCTGCGAGGAACAAG
EY910521       --> CACCAGGCTCGCCTTGGATAACCATATACTTAAGTCCTGCGAGGAACAAG
EW728149       --> CACCAGGCTCGCCTTGGATAACCATATACTTAAGTCCTGCGAGGAACAAG
FD574028       --> CACCAGGCTCGCCTTGGATAACCATATACTTAAATCCTGCGAGGAACAAG
EX909219       --> CACCAGGCTCGCCTTGGATAACCATATACTTAAGTCCTGCGAGGAACAAG
EY903594       --> CACCAGGCTCGCCTTGGATAACCATATACTTAAGTCCTGCGAGGAACAAG
EV574259       --> GACCAGGCTCGCCTTGGATAACCATATACTTAAGTCCTGCGAGGAACAAG
FD554526       --> CACCAGGCTCGCCTTGGATAACCATATACTTAAGTCCTGCGAGGAACAAG

               451    -    501
UN09584        --> CCTGTGGGAGCGAGGTGACCAGGCTCATCGAAATCTTTCATGATATCTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527242       <-- CCTGTGGGAGCGAGGTGACCAGGCTCATCGAAATCTTTCATGATATCTGT
EY914484       <-- CCTGTGGGAGCGAGGTGACCAGGCTCATCGAAATCTTTCATGATATCTGT
FD988788       <-- CCTGTGGGAGCGAGGTGACCAGGCTCATCGAAATCTTTCATGATATCTGT
FD569924       <-- CCTGTGGGAGCGAGGTGACCAGGCTCATCGAAATCTTTCATGATATCTGT
FD556164       <-- CCTGTGGGAGCGAGGTGACCAGGCTCATCGAAATCTTTCATGATATCTGT
EX905522       <-- CCTGTGGGAGCGAGGTGACCAGGCTCATCGAAATCTTTCATGATATCTGT
FD569709       <-- CCTGTGGGAGCGAGGTGACCAGGCTCATCGAAATCTTTCATGATATCTGT
EV569807       <-- CCTGTGGGAGCGAGGTGACCAGGCTCATCGAAATCTTTCATGATATCTGT
FD558672       <-- CCTGTGGGAGCGAGGTGACCAGGCTCATCGAAATCTTTCATGATATCTGT
EW723133       <-- CCTGTGGGAGCGAGGTGACCAGGCTCATCGAAATCTTTCATGATATCTGT
EY907727       <-- CCTGTGGGAGCGAGGTGACCAGGCTCATCGAAATCTTTCATGATATCTGT
EV531543       --> CCTGTGGGAGCGAGGTGACCAGGCTCATCGAAATCTTTCATGATATCTGT
FD984646       --> CCTGTGGGAGCGAGGTGACCAGGCTCATCGAAATCTTTCATGATATCTGT
FD573861       --> CCTGTGGGAGCGAGGTGACCAGGCTCATCGAAATCTTTCATGATATCTGT
EW719002       --> CCTGTGGGAGCGAGGTGACCAGGCTCATCGAAATCTTTCATGGTATCTGT
EY910521       --> CCTGTGGGAGCGAGGTGACCAGGCTCATCGAAATCTTTCATGATATCTGT
EW728149       --> CCTGTGGGAGCGAGGTGACCAGGCTCATCGAAATCTTTCATGATATCTGT
FD574028       --> CCTGTGGGAGCGAGGTGACCAGGCTC........................
EX909219       --> CCTGTGGGAGCGAGGTGACCAGGCTCATCGAAATCTTTCATGATATCTGT
EY903594       --> CCTGTGGGAGCGAGGTGACCAGGCTCATCGAAATCTTTCATGATATCTGT
EV574259       --> CCTGTGGGAGCGAGGTGACCAGGCTCATCAAAATCTTTCATGATATCTGT
FD554526       --> CCTGTGGGAGCGAGGTGACCAGGCTCATCGAAATCTTTCATGATATCTGT

               501    -    551
UN09584        --> CATCTCTTGAGGTTTGAACTGAGGAAAATTAGCACTCTGAGCCCAAACGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527242       <-- CATCTCTTGAGGTTTGAACTGAGGAAAATTAGCGCTCTGAGCCCAAACGC  Raphanus raphanistrum subsp. maritimus
EY914484       <-- CATCTCTTGAGGTTTGAACTGAGGAAAATTAGCACTCTGAGCC.......  Raphanus raphanistrum subsp. raphanistrum (NY)
FD988788       <-- CATCTCTTGAGGTTTGAACTGAGGAAAATTAGCACTCTGAGCCCAAACGC  Raphanus raphanistrum subsp. landra
FD569924       <-- CATCTCTTGAGGTTTGAACTGAGGAAAATTAGCACTCTGAGCCCAAACGC  Raphanus sativus cv Early Scarlet Globe
FD556164       <-- CATCTCTTGAGGTTTGAACTGAGGAAAATTAGCACTCTGAGCCCAAACGC  Raphanus raphanistrum subsp. landra
EX905522       <-- CATCTCTTGAGGTTTGAACTGAGGAAAATTAGCGCTCTGAGCCCAAACGC  Raphanus sativus cv Rat-Tail Radish #3870
FD569709       <-- CATCTCTTGAGGTTTGAACTGAGGAAAATTAGCACTCTGAGCCCAAACGC  Raphanus sativus cv Early Scarlet Globe
EV569807       <-- CATCTCTTGAGGTTTGGACTGAGGAAAATTAGCACTCTGAGCCCAAACGC  Raphanus raphanistrum subsp. landra
FD558672       <-- CATCTCTTGAGGTTTGAACTGAGGAAAATTAGCACTCTGAGCCCAAACGC  Raphanus raphanistrum subsp. landra
EW723133       <-- CATCTCTTGAGGTTTGAACTGAGGAAAATTAGCACTCTGAGCCCAAACGC  Raphanus sativus cv Early Scarlet Globe
EY907727       <-- CATCTCTTGAGGTTTGAACTGAGGAAAATTAGCACTCTGAGCCCAAACGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV531543       --> CATCTCTTGAGGTTTGAACTGAGGAAAATTAGCGCTCTGAGCCCAAACGC  Raphanus raphanistrum subsp. maritimus
FD984646       --> CATCTCTTGAGGTTTGAACTGAGGAAAATTAGCACTCTGAGCCCAAACGC  Raphanus raphanistrum subsp. landra
FD573861       --> CATCTCTTGAGGTTTGAACTGAGGAAAATTAGCACTCTGAGCCCAAACGC  Raphanus sativus cv Early Scarlet Globe
EW719002       --> CATCTCTTGAGGTTTGAACTGAGGAAAATTAGCGCTCTGAGCCCAAACGC  Raphanus sativus var. oleiformis
EY910521       --> CATCTCTTGAGGTTTGAACTGAGGAAAATTAGCACTCTGAGCC.......  Raphanus raphanistrum subsp. raphanistrum (NY)
EW728149       --> CATCTCTTGAGGTTTGAACTGAGGAAAATTAGCACTCTGAGCCCAAACGC  Raphanus sativus cv Early Scarlet Globe
FD574028       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX909219       --> CATCTCTTGAGGTTTGAACTGAGGAAAATTAGCGCTCTGAGCCCAAACGC  Raphanus sativus cv Rat-Tail Radish #3870
EY903594       --> CATCTCTTGAGGTTTGAACTGAGGAAAATTAGCACTCTGAGCCCAAACGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV574259       --> CATCTCTTGAGGTTTGGACTGAGGAAAATTAACACTCTGAGCCCAAACGC  Raphanus raphanistrum subsp. landra
FD554526       --> CATCTCTTGAGGTTTGAACTGAGGAAAAT.....................  Raphanus raphanistrum subsp. landra

               551    -    601
UN09584        --> TACCGTCATGGCCGATGATGGCGGCAGCGGTGAGGTGGTGACCTTGGCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527242       <-- TTCCGTCATGGCCGATGATGGCGGCAGCGGTGAGGTGGTGACCTTGGCCG  Raphanus raphanistrum subsp. maritimus
EY914484       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD988788       <-- TACCGTCATGGCCGATGATGGCGGCAGCGGTGAGGTGGTGACCTTGGCCG  Raphanus raphanistrum subsp. landra
FD569924       <-- TACCGTCATGGCCGATGATGGCGGCAGCGGTGAGGTGGTGACCTTGGCCG  Raphanus sativus cv Early Scarlet Globe
FD556164       <-- TACCGTCATGGCCGATGATGGCGGCAGCGGTGAGGTGGTGACCTTGGCCG  Raphanus raphanistrum subsp. landra
EX905522       <-- TTCCGTCATGGCCGATGATGGCGGCAGCGGTGAGGTGGTGACCTTGGCCG  Raphanus sativus cv Rat-Tail Radish #3870
FD569709       <-- TACCGTCATGGCCGATGATGGCGGCAGCGGTGAGGTGGTGACCTTGGCCG  Raphanus sativus cv Early Scarlet Globe
EV569807       <-- TACCGTCATGGCCGATGATGGCGGCAGCGGTGAGGTGGTGACCTTGGCCG  Raphanus raphanistrum subsp. landra
FD558672       <-- TACCGTCATGGCCGATGATGGCGGCAGCGGTGAGGTGGTGACCTTGGCCG  Raphanus raphanistrum subsp. landra
EW723133       <-- TACCGTCATGGCCGATGATGGCGGCAGCGGTGAGGTGGTGACCTTGGCCG  Raphanus sativus cv Early Scarlet Globe
EY907727       <-- TACCGTCATGGCCGATGATGGCGGCAGCGGTGAGGTGGTGACCTTGGCCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV531543       --> TTCCGTCATGGCCGATGATGGCGGCAGCGGTGAGGTGGTGACCTTGGCCG  Raphanus raphanistrum subsp. maritimus
FD984646       --> TACCGTCATGGCCGATGATGGCGGCAGCGGTGAGGTGGTGACCTTGGCCG  Raphanus raphanistrum subsp. landra
FD573861       --> TACCGTCATGGCCGATGATGGCGGCAGCGGTGAGGTGGTGACCTTGGCCG  Raphanus sativus cv Early Scarlet Globe
EW719002       --> TTCCGTCATGGCCGATGATGGCGGCAGCGGTGAGGTGGTGACCTTGGCCG  Raphanus sativus var. oleiformis
EY910521       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW728149       --> TACCGTCATGGCCGATGATGGCGGCAGCGGTGAGGTGGTGACCTTGGCCG  Raphanus sativus cv Early Scarlet Globe
FD574028       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX909219       --> TTCCGTCATGGCCGATGATGGCGGCAGCGGTGAGGTGGTGACCTTGGCCG  Raphanus sativus cv Rat-Tail Radish #3870
EY903594       --> TACCGTCATGGCCGATGATGGCGGCAGCGGTGAGGTGGTGACCTTGGCCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV574259       --> TACCGTCATGGCCGA...................................  Raphanus raphanistrum subsp. landra
FD554526       --> ..................................................  Raphanus raphanistrum subsp. landra

               601    -    651
UN09584        --> TCACCGACATCGCACATCAGATGCTCATCAACGTAAGTTTGCCACGACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527242       <-- TCACCGACATCGCACATCAGATGCTCATCAACGTAAGTTTGCCACGACAT
EY914484       <-- ..................................................
FD988788       <-- TCACCGACATCGCACATCAGATGCTCATCAACGTAAGTTTGCCACGACAT
FD569924       <-- TCACCGACATCGCACATCAGATGCTCATCAACGTAAGTTTGCCACGACAT
FD556164       <-- TCACCGACATCGCACATCAGATGCTCATCAACGTAAGTTTGCCACGACAT
EX905522       <-- TCACCGACATCGCACATCAGATGCTCATCAACGTAAGTTTGCCACGACAT
FD569709       <-- TCACAGACATCGCACATCAGATGCACATCAACGTAAGTTTGCCACGAAAT
EV569807       <-- TCACCGACATCGCACATCAGATGCTCATTAACGTAAGTTTGCCACGACAT
FD558672       <-- TCACCGACATCGCACATCAGATGCTCATCAACGTAAGTTTGCCACGACAT
EW723133       <-- TCACCGACATCGCACATCAGATGCTCATCAACGTAAGTTTGCCACGACAT
EY907727       <-- TCACCGACATCGCACATCAGATGCTCATCAACGTAAGTTTGCCACGACAT
EV531543       --> TCACCGACATCGCACATCAGATGCTCATCAACGTAAGTTTGCCACGACAT
FD984646       --> TCACCGACATCGCACATCAGATGCTCATCAACGTAAGTTTGCCACGACAT
FD573861       --> TCACAGACATCGCACATCAGATGCACATCAACGTAAGTTTGCCACGAAAT
EW719002       --> TCACCGACATCGCACATCAGATGCTCATCAACGTAAGTTTGCCACGACAT
EY910521       --> ..................................................
EW728149       --> TCACCGACATCGCACATCAGATGCTCATCAACGTAAGTTTGCCACGACAT
FD574028       --> ..................................................
EX909219       --> TCACCGACATCGCACATCAGATGCTCATCAACGTAAGTTTGCCACGACAT
EY903594       --> TCACCGACATCGCACA..................................
EV574259       --> ..................................................
FD554526       --> ..................................................

               651    -    701
UN09584        --> TATCTAGATCTCTTTCTTGTTCTTCCTTTTCTGTTTTCGTTCTTTAATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527242       <-- TATCTAGATCCCTTTCTTGTTCTTCCTTTTCTGTTTTCGTT-TTTAATCT  Raphanus raphanistrum subsp. maritimus
EY914484       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD988788       <-- TATCTAGATCTCTTTCTTGTTCTTCCTTTTCTGTTTTCGTTCTTTAATCT  Raphanus raphanistrum subsp. landra
FD569924       <-- TATCTAGATCTCTTTCTTGTTCTTCCTTTTCTGTTTTCGTTCTTTAATCT  Raphanus sativus cv Early Scarlet Globe
FD556164       <-- TATCTAGATCTCTTTCTTGTTCTTCCTTTTCTGTTTTCGTTCTTTAATCT  Raphanus raphanistrum subsp. landra
EX905522       <-- TATCTAGATCTCTTTCTTGTTCTTCCTTTTCTGTTTTCGTT-TTTAATCT  Raphanus sativus cv Rat-Tail Radish #3870
FD569709       <-- TATCTAGATCTCTTTCTTGTTCTTCCTTTTCTGTTTTCGTTCTTTAATCT  Raphanus sativus cv Early Scarlet Globe
EV569807       <-- TATCTAGATCTCTTTCTTGTTCTTCCTTTTCTGTTTTCGTTCTTTAATCT  Raphanus raphanistrum subsp. landra
FD558672       <-- TATCTAGATCTCTTTCTTGTTCTTCCTTTTCTGTTTTCGTTCTTTAATCT  Raphanus raphanistrum subsp. landra
EW723133       <-- TATCTAGATCTCTTTCTTGTTCTCCCTTTTCTGTTTTCGTTCTTTAATCT  Raphanus sativus cv Early Scarlet Globe
EY907727       <-- TATCTGGATCTC......................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV531543       --> TATCTAGATCCCTTTCTTGTTCTTCCTTTTCTGTTTTCGTT-TTTAATCT  Raphanus raphanistrum subsp. maritimus
FD984646       --> TATCTAGATCTCTTTCTTGTTCTTCCTTTTCTGTTTTCGTTCTTTAATCT  Raphanus raphanistrum subsp. landra
FD573861       --> TATCTAGATCTCTTTCTTGTTCTTCCTTTTCTGTTTTCGTTCTTTAATCT  Raphanus sativus cv Early Scarlet Globe
EW719002       --> Tcc...............................................  Raphanus sativus var. oleiformis
EY910521       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW728149       --> TATCTAGATCTCTTTCTTGTTCTCCCTTTTCTGTTTTCGTTCTTTAATCT  Raphanus sativus cv Early Scarlet Globe
FD574028       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX909219       --> TATCTAGATCTCTTTCTTGTTCTTCCTTTTCTGTTTTCGTT-TTTAATCT  Raphanus sativus cv Rat-Tail Radish #3870
EY903594       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV574259       --> ..................................................  Raphanus raphanistrum subsp. landra
FD554526       --> ..................................................  Raphanus raphanistrum subsp. landra

               701    -    751
UN09584        --> CTATACGTGTGTATGTGCAATGCAACTCTGACGGGACTTCGTCGTCTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV527242       <-- CTATACGTGTGTATGTGCcc..............................
EY914484       <-- ..................................................
FD988788       <-- CTATACGTGTGTATGTGCAATcc...........................
FD569924       <-- CTATACGTGTGTATGTGCAATGCAACTCTcc...................
FD556164       <-- CTATACGTGTGTATGTGCAATGCcc.........................
EX905522       <-- CTATACGTGTGTATGTGCAATGCAACTCTcc...................
FD569709       <-- CTATACGTGTGTATGTGCAATcc...........................
EV569807       <-- CTATACGTGTGTATGTGCAATGCAACTCTGACGGGACTTCGTCGTCTCTC
FD558672       <-- CTATACGTGTGTATGTGCAATGCcc.........................
EW723133       <-- CTATACGTGTGTATGTGCAATGAAACTCTGACGGGACTTCGTCGTCTCTC
EY907727       <-- ..................................................
EV531543       --> CTATACGTGTGTATGTGCcc..............................
FD984646       --> CTATACGTGTGTATGTGCAATcc...........................
FD573861       --> CTATACGTGTGTATGTGCAATcc...........................
EW719002       --> ..................................................
EY910521       --> ..................................................
EW728149       --> CTATACGTGTGTATGTGCAATGAAACTCTGACGGGACTTCGTCGTCTCTC
FD574028       --> ..................................................
EX909219       --> CTATACGTGTGTATGTGCAATGCAACTCTcc...................
EY903594       --> ..................................................
EV574259       --> ..................................................
FD554526       --> ..................................................

               751    -    801
UN09584        --> GATCCATAGGGAGCTA
                   ~~~~~~~~~~~~~~~~
EV527242       <-- ................
EY914484       <-- ................
FD988788       <-- ................
FD569924       <-- ................
FD556164       <-- ................
EX905522       <-- ................
FD569709       <-- ................
EV569807       <-- GATAAATAGGGAGCTA
FD558672       <-- ................
EW723133       <-- GATCC...........
EY907727       <-- ................
EV531543       --> ................
FD984646       --> ................
FD573861       --> ................
EW719002       --> ................
EY910521       --> ................
EW728149       --> GATCC...........
FD574028       --> ................
EX909219       --> ................
EY903594       --> ................
EV574259       --> ................
FD554526       --> ................