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Alignment for radish unigene UN09602

               1      -     51
UN09602        --> CATTTCTCTCTGCAAAGAAAAGCAGAAACCAAGAATGTGCGACTCAGACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752534       <-- ..................................................
EV567437       <-- ..................................................
EY941900       <-- ..................................................
FD947697       <-- ..................................................
FD948987       <-- ..................................................
EX748663       --> CATTTCTCTCTGCAAAGAAAAGCAGAAACCAAGAATGTGCGACTCAGACT
FD945857       --> .........................gAACCAAGAATGTGCGACTCAGACT
EX776912       --> ..................................................
EY937384       --> ..................................................
FD943593       --> ..................................................
EV572379       --> ..................................................

               51     -    101
UN09602        --> TTCTCTCTCGATGTTCCTCTTACGAGGCAGACTTTGATTCTGACTCCGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752534       <-- ..................................................
EV567437       <-- ..................................................
EY941900       <-- ..................................................
FD947697       <-- ..................................................
FD948987       <-- ..................................................
EX748663       --> TCCTCTCTCGATGTTCCTCTTACGAGGCAGACTTTGATTCTGACTCCGAC
FD945857       --> TTCTCTCTCGATGTTCCTCTTACGAGGCAGACTTTGATTCTGACTCCGAC
EX776912       --> ..................................................
EY937384       --> ..................................................
FD943593       --> ..................................................
EV572379       --> ..................................................

               101    -    151
UN09602        --> ATCTCTACCTCAAGCTCCTGCTCCACGTACAGTGAATCTGAGGAAGAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752534       <-- ........CTCAAGCTCCTGCTCCACGTACAGTGAATCTGAGGAAGAGAT
EV567437       <-- ..................................................
EY941900       <-- ..................................................
FD947697       <-- ..................................................
FD948987       <-- ..................................................
EX748663       --> ATCTCTACCTCAAGCTCCTGCTCCACGTACAGTGAATCTGAGGAAGAGAT
FD945857       --> ATCTCTACCTCAAGCTCCTGCTCCACGTACAGTGAATCTGAGGAAGAGAT
EX776912       --> ..................................................
EY937384       --> ..................................................
FD943593       --> ..................................................
EV572379       --> ..................................................

               151    -    201
UN09602        --> CAACAATGACTTCGGTTATGAGCTATCAACAAAGAAGTTGGAGAAAAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752534       <-- CAACAATGACTTCGGTTATGAGCTATCAACAAAGAAGTTGGAGAAAAAAG
EV567437       <-- ..................................................
EY941900       <-- ..................................................
FD947697       <-- ..................................................
FD948987       <-- ..................................................
EX748663       --> CAACAATGACTTCGGTTATGAGCTATCAACAAAGAAGTTGGAGAAAAAAG
FD945857       --> CAACAATGACTTCGGTTATGAGCTATCAACAAAGAAGTTGGATAAAAAGG
EX776912       --> ..................................................
EY937384       --> ..................................................
FD943593       --> ..................................................
EV572379       --> ..................................................

               201    -    251
UN09602        --> AGAAGAAGAAGAGCAATGTGTTGCTTGAAGGGTACGTTGAAGATTCGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752534       <-- AGAAGAAGAAGAGCAATGTGTTGCTTGAAGGGTACGTTGAAGATTCGCTG
EV567437       <-- ..................................................
EY941900       <-- ..................................................
FD947697       <-- ..................................................
FD948987       <-- ..................................................
EX748663       --> AGAAGAAGAAGAGCAATGTGTTGCTTGAAGGGTACGTTGAAGATTCGCTG
FD945857       --> AGAAGAAGAAGAGCAATGTGTTGCTTGAAGGGTACGTTGAAGATTCGCTG
EX776912       --> ..................................................
EY937384       --> ..................................................
FD943593       --> ..................................................
EV572379       --> ..................................................

               251    -    301
UN09602        --> GTGAATGATGATCTGAAGAGGACCAAGAGTTTAACGGACGATGACCTCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752534       <-- GTGAATGATGATCTGAAGAGGACCAAGAGTTTAACGGACGATGACCTCGA
EV567437       <-- ..................................................
EY941900       <-- ..................................................
FD947697       <-- ..................................................
FD948987       <-- ..................................................
EX748663       --> GTGAATGATGATCTGAAGAGGACCAAGAGTTTAACGGACGATGACCTCGA
FD945857       --> GTGAATGATGATCTGAAGCGGACCAAGAGTTTAACGGACGATGATCTCGA
EX776912       --> ..................................................
EY937384       --> ..................................................
FD943593       --> ..................................................
EV572379       --> ..................................................

               301    -    351
UN09602        --> GGAGCTTAAAGGTTGTGTAGATCTTGGTTTCGGGTTCAACTACGAGGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752534       <-- GGAGCTTAAAGGTTGTGTAGATCTTGGTTTCGGGTTCAACTACGAGGAGA
EV567437       <-- ..................................................
EY941900       <-- ..................................................
FD947697       <-- ..................................................
FD948987       <-- ..................................................
EX748663       --> GGAGCTTAAAGGTTGTGTA...............................
FD945857       --> AGAGCTTAAAGGTTGTGTAGATCTTGGTTTCGGGTTCAACTACGAGGAGA
EX776912       --> ..................................................
EY937384       --> ..................................................
FD943593       --> ..................................................
EV572379       --> ..................................................

               351    -    401
UN09602        --> TTCCTGAGCTTTGTAATACTTTACCTGCTCTTGAGCTTTGTTACTCGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752534       <-- TTCCTGAGCTTTGTAATACTTTACCTGCTCTTGAGCTTTGTTACTCGATG
EV567437       <-- ..................................................
EY941900       <-- ..................................................
FD947697       <-- ..................................................
FD948987       <-- ..................................................
EX748663       --> ..................................................
FD945857       --> TTCCTGAGCTTTGTAATACTTTACCTGCTCTTGAGCTTTGCTACTCGATG
EX776912       --> ..................................................
EY937384       --> ..................................................
FD943593       --> ..................................................
EV572379       --> ..................................................

               401    -    451
UN09602        --> AGTCAGAAGTTTATGGACCAAGATCATCCTCACCATATTTCTTCGCCTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752534       <-- AGTCAGAAGTATATGGACCAAGATCATCCTCACCATATTTCTTCGCCTGT
EV567437       <-- ..................................................
EY941900       <-- ..................................................
FD947697       <-- ..................................................
FD948987       <-- ..................................................
EX748663       --> ..................................................
FD945857       --> AGTCAGAAGTTTATGGACCAAGATCATCCCCACCATATTTCTTCGCCTGT
EX776912       --> ..................................................
EY937384       --> ..................................................
FD943593       --> ..................................................
EV572379       --> ..................................................

               451    -    501
UN09602        --> GAAGAAGTTTAAGACGATGGTTGTGTCACACGTTAGTCCAATAGCTAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752534       <-- GAAGAAGTTTAAGACGATGGTTGTGTCACACGTTAGTCCAATAGCTAGCT
EV567437       <-- ..................................................
EY941900       <-- ..................................................
FD947697       <-- ..................................................
FD948987       <-- ..................................................
EX748663       --> ..................................................
FD945857       --> GAAGAAGTCTAAGACGATGGTTGTGTCACACGTTAGTCCAATAGCTAGCT
EX776912       --> ..................................................
EY937384       --> ..................................................
FD943593       --> ..................................................
EV572379       --> ..................................................

               501    -    551
UN09602        --> GGAAGATCTCTAGTCCTGGGGACAATCCTGATGATGTCAGAGCAAGGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752534       <-- GGAAGATCTCTAGTCCCGGGGACAATCCTGATGATGTCAAAGCAAGGTTG
EV567437       <-- ..................................................
EY941900       <-- ..................................................
FD947697       <-- ..................................................
FD948987       <-- ..................................................
EX748663       --> ..................................................
FD945857       --> GGAAGATCTCTAGTCCTGGGGACAATCCTGATGATGTCAGAGCAAGGTTG
EX776912       --> ..................................................
EY937384       --> ..................................................
FD943593       --> ..................................................
EV572379       --> ..................................................

               551    -    601
UN09602        --> AGATTCTGGGCACAAGCAGTGGCATGCACTGTGAGACTATGCACTTGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752534       <-- AGATTCTGGGCACAAGCAGTGGCATGCACTGTGAGACTATGCACTTGAGG
EV567437       <-- ..................................................
EY941900       <-- ..................................................
FD947697       <-- ..................................................
FD948987       <-- ..................................................
EX748663       --> ..................................................
FD945857       --> AGATTCTGGGCACAAGCAGTGGCATGCACTGTGAGACTATGCACTTGAag
EX776912       --> ..................................................
EY937384       --> ..................................................
FD943593       --> ..................................................
EV572379       --> ..................................................

               601    -    651
UN09602        --> AGGATAAGAAGATGGACAACAAACACAACTCTCATGAGCTGCTCAGATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752534       <-- AGGATAAGAAGATGGACAACAAACACAACTCTCATGAGCTGCTCAGATAT
EV567437       <-- ..................................................
EY941900       <-- ..................................................
FD947697       <-- ..................................................
FD948987       <-- ..................................................
EX748663       --> ..................................................
FD945857       --> a.................................................
EX776912       --> ..................................................
EY937384       --> ..................................................
FD943593       --> ..................................................
EV572379       --> ..................................................

               651    -    701
UN09602        --> GTACAAAAAGATTTTGGTAATGAAATTTGTTGTAATTGCATTCTTGTAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752534       <-- GTACAAAAAGATTTTGGTAATGAAATTTGTTGTAATTGCATTCTTGTAAG
EV567437       <-- ..................................................
EY941900       <-- ..................................................
FD947697       <-- ..................................................
FD948987       <-- ..................................................
EX748663       --> ..................................................
FD945857       --> ..................................................
EX776912       --> ...............GGTAATGAAATTTGTTGTAATTGCATTCTTGTAAG
EY937384       --> ...............GGTAATGAAATTTGTTGTAATTGCATTCTTGTAAG
FD943593       --> ...............GGTAATGAAATTTGTTGTAATTGCATTCTTGTAAG
EV572379       --> ..................................................

               701    -    751
UN09602        --> AGAACATAAATAAAGTTCTATTCTTTTGATGAATATTGGTTACTAAGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752534       <-- AGAACATAAATAAAGTTCTATTCTTTTGATGAATATTGGTTACTAAGAAC
EV567437       <-- ..........................................CTAAGAAC
EY941900       <-- ..................................................
FD947697       <-- ..................................................
FD948987       <-- ..................................................
EX748663       --> ..................................................
FD945857       --> ..................................................
EX776912       --> AGAACATAAATAAAGTTCTATTCTTTTGATGAATATTGGTTACTAAGAAC
EY937384       --> AAAACATAAATAAAGTTCTATTCTTTTGATGAATATTGGTTACTAAGAAC
FD943593       --> AAAACATAAATAAAGTTCTATTCTTTTGATGAATATTGGTTACTAAGAAC
EV572379       --> ...........................ggTGAATATTGGTTACTAAGAAC

               751    -    801
UN09602        --> ATTCAGTCACACAACACAAGCATATATCTAAAGAGAATCAGTATATAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752534       <-- ATTC..............................................
EV567437       <-- ATTCAGTCACACAACACAAGCATATATCTAAAGAGAATCAGTATATAAAA
EY941900       <-- ..................................................
FD947697       <-- ..................................................
FD948987       <-- ..................................................
EX748663       --> ..................................................
FD945857       --> ..................................................
EX776912       --> ATTCAGTCACACAACACAAGCATATATCTAAAGAGAATCAGTATATAAAA
EY937384       --> ATTCAGTCACACAACACAAGCATATATCTAAAGAGAATCAGTATATAAAA
FD943593       --> ATTCAGTCACACAACACAAGCATATATCTAAAGAGAATCAGTATATAAAA
EV572379       --> ATTCAGTCACACAACACAAGCATATATCTAAAGAGAATCAGTATATAAAA

               801    -    851
UN09602        --> GTAGCTCTTCAGTCTCCAACTCGGACATGCTCCATGCTTCTGATCTCCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752534       <-- ..................................................
EV567437       <-- GTAACTCTTCAGTCTCCAACTCGGACATGCTCCATGCTTCTGATCTCCTT
EY941900       <-- ..................................................
FD947697       <-- ..................................................
FD948987       <-- ..................................................
EX748663       --> ..................................................
FD945857       --> ..................................................
EX776912       --> GTAGCTCTTCAGTCTCCAACTCGGACATGCTCCATGCTTCTGATCTCCTT
EY937384       --> GTAGCTCTTCAGTCTCCAACTCGGACATGCTCCATGCTTCTGATCTCCTT
FD943593       --> GTAGCTCTTCAGTCTCCAACTCGGACATGCTCCATGCTTCTGATCTCCTT
EV572379       --> GTAACTCTTCAGTCTCCAACTCGGACATGCTCCATGCTTCTGATCTCCTT

               851    -    901
UN09602        --> TCCTTGAATTTTTTATGTTCACGTAGATGCCAATAGCTTCTCTATGTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752534       <-- ..................................................
EV567437       <-- TCCTTGAATTTTTTATGTTCACGTAGATGCCAATAGCTTCTCTATGTCCT
EY941900       <-- .........TTTTTATGTTCACGTAGATGCCAATAGCTTCTCTATGTC-T
FD947697       <-- ..................................................
FD948987       <-- ..................................................
EX748663       --> ..................................................
FD945857       --> ..................................................
EX776912       --> TCCTTGAATTTTTTATGTTCACGTAGATGCCAATAGCTTCTCTATGTCCT
EY937384       --> TCCTTGAATTTTTTATGTTCACGTAGATGCCAATAGCTTCTCTATGTCCT
FD943593       --> TCCTTGAATTTTTTATGTTCACGTAGATGCCAATAGCTTCTCTATGTCCT
EV572379       --> TCCTTGAATTTTTTATGTTCACGTAGATGCCAATAGCTTCTCTATGTCCT

               901    -    951
UN09602        --> TCTCAATCTCAAGAGGTGATGTTGTCGGAGCAAATCGATCCACGACATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752534       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV567437       <-- TCTCAATCTCAAGAGGTGATGTTGTAGGAGCATATCGATCCACAACATTT  Raphanus raphanistrum subsp. landra
EY941900       <-- TCTCAATCTCAAGAGGTGATGTTGTCGGAGCAAATCGATCCACGACATTT  Raphanus sativus cv Early Scarlet Globe
FD947697       <-- ..TCAATCTCAAGAGGTGATGT-GTCGGAGCAAATCGATCCACGACATTT  Raphanus sativus cv Early Scarlet Globe
FD948987       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX748663       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD945857       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX776912       --> TCTCAATCTCAAGAGGTGATGTTGTAGGAGCATATCGATCCACAACATTT  Raphanus raphanistrum subsp. landra
EY937384       --> TCTCAATCTCAAGAGGTGATGTTGTCGGAGCAAATCGATCCACGACATTT  Raphanus sativus cv Early Scarlet Globe
FD943593       --> TCTCAATCTCAAGAGGTGATGTTGTCGGAGCAAATCGATCCACGACATTT  Raphanus sativus cv Early Scarlet Globe
EV572379       --> TCTCAATCTCAAGAGGTGATGTTGTAGGAGCATATCGATCCACAACATTT  Raphanus raphanistrum subsp. landra

               951    -   1001
UN09602        --> CCTTGTCTGTCTACCAGAAACTTTGCGAAGTTCCACTTGATAGAATCCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752534       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV567437       <-- CCTTGTTTGTCTACCAGAAATTTTGCGAAGTTCCACTTGATAGAATCCCC  Raphanus raphanistrum subsp. landra
EY941900       <-- CCTTGTCTGTCTACCAGAAACTT-GCGAAGTTC-ACTTGATAGAATCCCC  Raphanus sativus cv Early Scarlet Globe
FD947697       <-- C-TTGTCTGTCTACCAGAAACTTTGCGAAGTTCCACTTGATAGAATCCCC  Raphanus sativus cv Early Scarlet Globe
FD948987       <-- ..........CTACCAGAAACTTTGCGAAGTTCCACTTGATAGAATCCCC  Raphanus sativus cv Early Scarlet Globe
EX748663       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD945857       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX776912       --> CCTTGTTTGTCTACCAGAAATTTTGCGAAGTTCCACTTGATAGAATCACC  Raphanus raphanistrum subsp. landra
EY937384       --> CCTTGTCTGTCTACCAGAAACTTTGCGAAGTTC-ACTTGATAGAATCCCC  Raphanus sativus cv Early Scarlet Globe
FD943593       --> CCTTGTCTGTCTACCAGAAACTTTGCGAAGTTCCACTTGATAGAATCCCC  Raphanus sativus cv Early Scarlet Globe
EV572379       --> CCTTGTTTGTCTACCAGAAATTTTGCGAAGTTCCACTTGATAGAATCCCC  Raphanus raphanistrum subsp. landra

               1001   -   1051
UN09602        --> AAACAATCCACCTTTCTGTTCTTTCAAGAACTTGTATAGAGGTGAAGCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752534       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV567437       <-- AAACAATCCACCTTTCTGTTCTTTCAAGAACTTGTATAGAGGCGAAGCAT  Raphanus raphanistrum subsp. landra
EY941900       <-- AAACAATCCACCTTTCTGTTCTTTCAAGAACTTGTATAGAGGTGAAGCAT  Raphanus sativus cv Early Scarlet Globe
FD947697       <-- AAACAATCCACCTTTCTGTTCTTTCAAGAACTTGTATAGAGGTGAAGCAT  Raphanus sativus cv Early Scarlet Globe
FD948987       <-- AAACAATCCACCTTTCTGTTCTTTCAAGAACTTGTATAGAGGTGAAGCAT  Raphanus sativus cv Early Scarlet Globe
EX748663       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD945857       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX776912       --> AAACAATCCACCTTTCTGTTCTTTCAAGAACTTGTATAGAGGCGAAGCAT  Raphanus raphanistrum subsp. landra
EY937384       --> AAACAATCCACCTTTCTGTTCTTTCAAGAACTTGTATAGAGGTGAAGCAT  Raphanus sativus cv Early Scarlet Globe
FD943593       --> AAACAATCCACCTTTCTGTTCTTTCAAGAACTTGTATAGAGGTGAAGCAT  Raphanus sativus cv Early Scarlet Globe
EV572379       --> AAACAATCCACCTTTCTGTTCTTTCAAGAACTTGTATAGAGGCGAAGCAT  Raphanus raphanistrum subsp. landra

               1051   -   1101
UN09602        --> TCTCACCATTCACTTCAATCTTGTCAAAGATGGGAAACTCTCCTTTGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752534       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV567437       <-- TCTCACCATTCACTTCAATCTTGTCAAAGATGGGAAACTCTCCTTTGAAG  Raphanus raphanistrum subsp. landra
EY941900       <-- TCTCACCATTCACTTCAATCTTGTCAAAGATGGGAAACTCTCCTTTGAAA  Raphanus sativus cv Early Scarlet Globe
FD947697       <-- TCTCACCATTCACTTCAATCTTGTCAAAGATGGGAAACTCTCCTTTGAAA  Raphanus sativus cv Early Scarlet Globe
FD948987       <-- TCTCACCATTCACTTCAATCTTGTCAAAGATGGGAAACTCTCCTTTGAAA  Raphanus sativus cv Early Scarlet Globe
EX748663       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD945857       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX776912       --> TCTCACCATTCACTTCAATCTTGTCAAAGATGGGAAACTCTCCTTTGAAG  Raphanus raphanistrum subsp. landra
EY937384       --> TCTCACCATTCACTTCAATCTTGTCAAAGATGGGAAACTCTCCTTTGAAA  Raphanus sativus cv Early Scarlet Globe
FD943593       --> TCTCACCATTCACTTCAATCTTGTCAAAGATGGGAAACTCTCCTTTGAAA  Raphanus sativus cv Early Scarlet Globe
EV572379       --> TCTCACCATTCACTTCAATCTTGTCAAAGATGGGAAACTCTCCTTTGAAG  Raphanus raphanistrum subsp. landra

               1101   -   1151
UN09602        --> GTTGTGCAAATGTTATCCTTAATCTCCTTGTTGCTACCTGGCTCTTGACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752534       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV567437       <-- GTTGTGCAAGTGTTATCCTTAATCTCCTTGTTGCTACCTGGCTCTTGATT  Raphanus raphanistrum subsp. landra
EY941900       <-- GTTGTGCAAATGTTATCCTTAATCTCCTTGTTGCTACCTGGCTCATGACT  Raphanus sativus cv Early Scarlet Globe
FD947697       <-- GTTGTGCAAATGTTATCCTTAATCTCCTTGTTGCTACCTGGCTCTTGACT  Raphanus sativus cv Early Scarlet Globe
FD948987       <-- GTTGTGCAAATGTTATCCTTAATCTCCTTGTTGCTACCTGGCTCTTGACT  Raphanus sativus cv Early Scarlet Globe
EX748663       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD945857       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX776912       --> GTTGTGCAAATGTTATCCTTAATCTCCTTGTTGCTACCTGGCTCTCGATT  Raphanus raphanistrum subsp. landra
EY937384       --> GTTGTGCAAATGTTATCCTTAATCTCCTTGTTGCTACCTGGCTCATGACT  Raphanus sativus cv Early Scarlet Globe
FD943593       --> GTTGTGCAAATGTTATCCTTAATCTCCTTGTTGCTACCTGGCTCTTGACT  Raphanus sativus cv Early Scarlet Globe
EV572379       --> GTTGTGCAAGTGTTATCCTTAATCTCCTTGTTGCTACCTGGCTCTTGATT  Raphanus raphanistrum subsp. landra

               1151   -   1201
UN09602        --> TCCAAATTGGTTGCAGGGAAACGCTAAGATCTCAAGCCCCTTAGTTTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752534       <-- ..................................................
EV567437       <-- TCCAAATTGGTTGCAGGGAAACGCTAAGATCTCAAGCCCCTTAGTTTTGT
EY941900       <-- TCCAAATTGGTTGCAGGGAAACGCTAAGATCTCAAGCCCCTTAGTTTTGT
FD947697       <-- TCCAAATTGGTTGCAGGGAAACGCTAAGATCTCAAGCCCCTTAGTTTTGT
FD948987       <-- TCCAAATTGGTTGCAGGGAAACGCTAAGATCTCAAGCCCCTTAGTTTTGT
EX748663       --> ..................................................
FD945857       --> ..................................................
EX776912       --> TCCAAATTGGTTGCAGGGAAACGCTAAGATCTCAAGCCCCTTAGTTTTGT
EY937384       --> TCCAAATTGGTT......................................
FD943593       --> TCCAAATTGGTTGCAGGGAAACGCTAAGATCTCAAGCCCCTTAGTTTTGT
EV572379       --> TCCAAATTGGTTGCAGGGAAACGCTAAGATCTCAAGCCCCTTAGTTTTGT

               1201   -   1251
UN09602        --> ACTTGGCATACAAAATGTTCAACTCTTTGTAGTTTCCTTGTGTTAGACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752534       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV567437       <-- ACTTGGCATACAAAATGTTCAACTCTTTGTAGTTTCCCTGTGTTAGACCA  Raphanus raphanistrum subsp. landra
EY941900       <-- ACTTGGCATACAAAATGTTCAACTCTTTGTAGTTTCCTTGTGTTAGACCA  Raphanus sativus cv Early Scarlet Globe
FD947697       <-- ACTTGGCATACAAAATGTTCAACTCTTTGTAGTTTCCTTGTGTTAGACCA  Raphanus sativus cv Early Scarlet Globe
FD948987       <-- ACTTGGCATACAAAATGTTCAACTCTTTGTAGTTTCCTTGTGCTAGACCA  Raphanus sativus cv Early Scarlet Globe
EX748663       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD945857       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX776912       --> ACTTGGCATACAAAATGTTCAACTCTTTGTAGTTTCCCTGTGTTAGACCA  Raphanus raphanistrum subsp. landra
EY937384       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD943593       --> ACTTGGCATACAAAATGTTCAACTCTTTGTAGTTTCCTTGTGTTAGACCA  Raphanus sativus cv Early Scarlet Globe
EV572379       --> ACTTGGCATACAAAATGTTCAACTCTTTGTAGTTTCCCTGTGTTAGACCA  Raphanus raphanistrum subsp. landra

               1251   -   1301
UN09602        --> CACTTAGAGGCTACGTTGACAATAAGAAGCACCTTTCCAGTGAACTTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752534       <-- ..................................................
EV567437       <-- CACTTAGAGGCTACGTTGACAATAAGAAGCACCTTTCCAGTGAACTTGCT
EY941900       <-- CACTTAGAGGCTACGTTGACAATAAGAAGCACCTTTCCAGTGAACTTGCT
FD947697       <-- CACTTAGAGGCTACGTTGACAATAAGAAGCACCTTTCCAGTGAACTTGCT
FD948987       <-- CACTTAGAGGCTACGTTGACAATAAGAAGCACCTTTCCAATGAACTTGCT
EX748663       --> ..................................................
FD945857       --> ..................................................
EX776912       --> CACTTAGAGGCTACGTTGACAATAAGAAGCACCTTTCCAGTGAACTTGCT
EY937384       --> ..................................................
FD943593       --> CACTTAGAGGCTACGTTGACAATAAGAAGCACCTTTCCAGTGAACTTGCT
EV572379       --> CACTTAGAGGCTACGTTGACAATAAGAAGCACCTTTCCAGTGAACTTGCT

               1301   -   1351
UN09602        --> TAAACTCACATCATTCCCATCAATGTCCTTAACGGAGATGTGGTAGATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752534       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV567437       <-- TAAACTCACATCATTCCCATCAATATCCTTAACGGAGATGTGGTAGATGG  Raphanus raphanistrum subsp. landra
EY941900       <-- TAAACTCACATCATTCCCATCAATGTCCTTAACGGAGATGTGGTAGATGG  Raphanus sativus cv Early Scarlet Globe
FD947697       <-- TAAACTCACATCATTCCCATCAATGTCCTTAACGGAGATGTGGTAGATGG  Raphanus sativus cv Early Scarlet Globe
FD948987       <-- TAAACTCACATCATTCCCATCAATGTCCTTAACGGAGATGTGGTAGATGG  Raphanus sativus cv Early Scarlet Globe
EX748663       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD945857       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX776912       --> TAAACTCACATCATTCCCATCAATATCCTTAACGGAGATGTGGTAGATGG  Raphanus raphanistrum subsp. landra
EY937384       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD943593       --> TAAACTCACATCATTCCCATCAATGTCCTTAACGGAGATGTGGTAGATGG  Raphanus sativus cv Early Scarlet Globe
EV572379       --> TAAACTCACATCATTCCCATCAATATCCTTAACGGAGATGTGGTAGATGG  Raphanus raphanistrum subsp. landra

               1351   -   1401
UN09602        --> AGCTGTATGATGATTGTTCGACAATAGCTGGAGAAGGCAGGTACCTGTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752534       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV567437       <-- AGCTGTATGATGATTGGTCGACAATAGCTGGAGAAGGCAGGTACCTGTAC  Raphanus raphanistrum subsp. landra
EY941900       <-- AGCTGTATGATGATTGTTCGACAATAGCTGGAGAAGGCAAGTACCTGTAA  Raphanus sativus cv Early Scarlet Globe
FD947697       <-- GGCTGTATGATGATTGTTCGACAATAGCTGGAGAAGGCAAGTACCTGTAA  Raphanus sativus cv Early Scarlet Globe
FD948987       <-- AGCTGTATGATGATTGTTCGACAATAGCTGGAGAAGGCAAGTACCTGTAA  Raphanus sativus cv Early Scarlet Globe
EX748663       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD945857       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX776912       --> AGCTGTATGATGATTGGTCGACAATAGCTGGAGAAGGCAGGTACCTGTAC  Raphanus raphanistrum subsp. landra
EY937384       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD943593       --> GGCTGTATGATGATTGTTCGACAATAGCTG....................  Raphanus sativus cv Early Scarlet Globe
EV572379       --> AGCTGTATGATGATTGGTCGACAATAGCTGGAGAAGGCAGGTACCTGTAC  Raphanus raphanistrum subsp. landra

               1401   -   1451
UN09602        --> AGGTAGAACACAAAGGCTAGAGGCAATAAGAGAATCAGGACACGACTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752534       <-- ..................................................
EV567437       <-- AGGTAGAACACAAAGGCTAGAGGCAATAACAGAATCAGGACACGACTTCT
EY941900       <-- AGGTAGAACACAAAGGCTAGAGGCAATAAGAGAATCAGGACACGACTTCT
FD947697       <-- AGGTAGAACACAAAGGCTAGAGGCAATAAGAGAATCAGGACACGACTTCT
FD948987       <-- AGGTAGAACACAAAGGCTAGAGGCAATAAGAGAATCAGGACACGACTTCT
EX748663       --> ..................................................
FD945857       --> ..................................................
EX776912       --> AGGTAGAACACAAA....................................
EY937384       --> ..................................................
FD943593       --> ..................................................
EV572379       --> AGGTAGAACACAAAGGCTAGAGGCAATAACAGAATCAGGACACGACTTCT

               1451   -   1501
UN09602        --> TGATCTAGGCATCGAGACAGATTCTCTATGAATGACGATGAGGACGAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752534       <-- ..................................................
EV567437       <-- TGATCTAGGCATCGAGACAGATTCTCTATGAATGACGATGAGGACGAACA
EY941900       <-- TGATCTAGGCATCGAGACAGATTCTCTATGAATGACGATGAGGACGAACA
FD947697       <-- TGATCTAGGCATCGAGACAGATTCTCTATGAATGACGATGAGGACGAACA
FD948987       <-- TGATCTAGGCATCGAGACAGATTCTCTATGAATGACGATGAGGACGAACA
EX748663       --> ..................................................
FD945857       --> ..................................................
EX776912       --> ..................................................
EY937384       --> ..................................................
FD943593       --> ..................................................
EV572379       --> TGATCTAGGCATCGAGACAGATTCTCTATGAATGACGATGAGGACGAACA

               1501   -   1551
UN09602        --> AACAAATGTGTTCAAGTTCTAACACCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752534       <-- ...........................
EV567437       <-- AACAAATGTGTTCAAGTTCTAACACCC
EY941900       <-- AACAAATGTcc................
FD947697       <-- AACAAATGTGTTCcaacacaaccc...
FD948987       <-- AACAAATGTGTTCcaacacaacaccc.
EX748663       --> ...........................
FD945857       --> ...........................
EX776912       --> ...........................
EY937384       --> ...........................
FD943593       --> ...........................
EV572379       --> AACAAATGTGTTCAAGTTCTAACACCC