Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN09662

               1      -     51
UN09662        --> GATCAA-CCTTTCTTCACCACATTTCACCGAGAGCCCACACATCGAGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY436128       <-- ..................................................
EX901573       <-- ..................................................
EX776716       <-- ..................................................
EY909655       <-- ..................................................
FD546674       <-- ..................................................
FY445263       <-- ..................................................
FY428526       <-- ..................................................
EY902399       <-- ..................................................
FD977224       <-- ..................................................
FD566945       <-- ..................................................
FD984106       <-- ..................................................
FD935463       <-- ..................................................
EY912806       <-- ..................................................
FD550764       --> GATCAAACCTTTCTTCACCACATTTCACCGAGAGCCCACATAT-------
FD988175       --> GATCAA-CCTTTCTTCACCACATTTCACCGAGAGCCCACACATCGAGAGA
FY434573       --> .........................................ATCGAGAGA
EY931192       --> ..................................................
FD981467       --> ..................................................
EX897898       --> ..................................................
EV527695       --> ..................................................
FD563269       --> ..................................................
FD939308       --> ..................................................
EY898349       --> ..................................................
FD987431       --> ..................................................
EY917259       --> ..................................................

               51     -    101
UN09662        --> GAGAGAGAGAGAAACTTCTCCCAAATCTCTCTCCAGCAATGGTTGTTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY436128       <-- ..................................................
EX901573       <-- ..................................................
EX776716       <-- ..................................................
EY909655       <-- ..................................................
FD546674       <-- ..................................................
FY445263       <-- ..................................................
FY428526       <-- ..................................................
EY902399       <-- ..................................................
FD977224       <-- ..................................................
FD566945       <-- ..................................................
FD984106       <-- ..................................................
FD935463       <-- ..................................................
EY912806       <-- ..................................................
FD550764       --> -AGAGAGAGAGAAACTTCTCCCAAATCTCTCTCCAGCAATGGTTGTTGCT
FD988175       --> GAGAGAGAGAGAAACTTCTCCCAAATCTCTCTCCAGCAATGGTTGTTGCT
FY434573       --> GAGAGAGAGAGAAACTTCTCCCAAATCTCTCTCCATCAATGGTTGTTGCT
EY931192       --> ................TCTCCCAAATCTCTCTCCAGCAATGGTTGTTGCT
FD981467       --> ..................................................
EX897898       --> ..................................................
EV527695       --> ..................................................
FD563269       --> ..................................................
FD939308       --> ..................................................
EY898349       --> ..................................................
FD987431       --> ..................................................
EY917259       --> ..................................................

               101    -    151
UN09662        --> ATGGACCAGCGCAGCAATGTGAACGGAGTTTCCGGTGCTCGGAAGGAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY436128       <-- ..................................................
EX901573       <-- ..................................................
EX776716       <-- ..................................................
EY909655       <-- ..................................................
FD546674       <-- ..................................................
FY445263       <-- ..................................................
FY428526       <-- ..................................................
EY902399       <-- ..................................................
FD977224       <-- ..................................................
FD566945       <-- ..................................................
FD984106       <-- ..................................................
FD935463       <-- ..................................................
EY912806       <-- ..................................................
FD550764       --> ATGGACCAGCGCAGCAATGTGAACGGAGTTTCCGGTGCTCGGAAGGAAGA
FD988175       --> ATGGACCAGCGCAGCAATGTGAACGGAGTTTCCGGTGCTCGGAAGGAAGA
FY434573       --> ATGGACCAGCGCAGCAATGTGAACGGAGTTTCCGGTGCTCGGAAGGAAGA
EY931192       --> ATGGACCAGCGCAGCAATTTGAACGGAGTTTCCGGTGCTCGGAAGGAAGA
FD981467       --> ............................................GGAAGA
EX897898       --> ..................................................
EV527695       --> ..................................................
FD563269       --> ..................................................
FD939308       --> ..................................................
EY898349       --> ..................................................
FD987431       --> ..................................................
EY917259       --> ..................................................

               151    -    201
UN09662        --> AGGGTTTGATCCAAGCGCACAACCACCGTTTAAGATCGGAGATATAAGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY436128       <-- ..................................................
EX901573       <-- ..................................................
EX776716       <-- ..................................................
EY909655       <-- ..................................................
FD546674       <-- ..................................................
FY445263       <-- ..................................................
FY428526       <-- ..................................................
EY902399       <-- ..................................................
FD977224       <-- ..................................................
FD566945       <-- ..................................................
FD984106       <-- ..................................................
FD935463       <-- ..................................................
EY912806       <-- ..................................................
FD550764       --> AGGGTTTGATCCAAGCGCACAACCACCGTTTAAGATCGGAGATATAAGGG
FD988175       --> AGGGTTTGATCCAAGCGCACAACCACCGTTTAAGATCGGAGATATAAGGG
FY434573       --> AGGGTTTGATCCAAGCGCACAACCACCGTTTAAGATCGGAGATATAAGGG
EY931192       --> AGGGTTTGATCCAAGCGCACAACCACCGTTTAAGATCGGAGATATAAGGG
FD981467       --> AGGGTTTGATCCAAGCGCACAACCACCGTTTAAGATCGGAGATATAAGGG
EX897898       --> ..........................gGTTTAAGATCGGAGATATAAGGG
EV527695       --> ..................................................
FD563269       --> ..................................................
FD939308       --> ..................................................
EY898349       --> ..................................................
FD987431       --> ..................................................
EY917259       --> ..................................................

               201    -    251
UN09662        --> CGGCGATTCCTAAGCATTGTTGGGTCAAGAGTCCTTTGAGATCTATGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY436128       <-- ..................................................
EX901573       <-- ..................................................
EX776716       <-- ..................................................
EY909655       <-- ..................................................
FD546674       <-- ..................................................
FY445263       <-- ..................................................
FY428526       <-- ..................................................
EY902399       <-- ..................................................
FD977224       <-- ..................................................
FD566945       <-- ..................................................
FD984106       <-- ..................................................
FD935463       <-- ..................................................
EY912806       <-- ..................................................
FD550764       --> CGGCCATTCCGAAGCATTGTTGGGTCAAGAGTCCTTTGAGATCTATGAGC
FD988175       --> CGGCGATTCCGAAGCATTGTTGGGTCAAGAGTCCGTTGAGATCTATGAGC
FY434573       --> CGGCGATTCCTAAGCATTGTTGGGTCAAGAGTCCTTTGAGATCTATGAGC
EY931192       --> CGGCGATTCCTAAGCATTGTTGGGTCAAGAGTCCTTTGAGATCTATGAGC
FD981467       --> CGGCCATTCCGAAGCATTGTTGGGTCAAGAGTCCTTTGAGATCTATGAGC
EX897898       --> CGGCGATTCCTAAGCATTGTTGGGTCAAGAGTCCTTTGAGATCTATGAGC
EV527695       --> ..................................................
FD563269       --> ..................................................
FD939308       --> ..................................................
EY898349       --> ..................................................
FD987431       --> ..................................................
EY917259       --> ..................................................

               251    -    301
UN09662        --> TATGTCGCCAGAGACATTTTCGCCGTCGCGGCTCTGGCCATGGCCGCTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY436128       <-- ..................................................
EX901573       <-- ..................................................
EX776716       <-- ..................................................
EY909655       <-- ..................................................
FD546674       <-- ..................................................
FY445263       <-- ..................................................
FY428526       <-- ..................................................
EY902399       <-- ..................................................
FD977224       <-- ..................................................
FD566945       <-- ..................................................
FD984106       <-- ..................................................
FD935463       <-- ..................................................
EY912806       <-- ..................................................
FD550764       --> TATGTCGCCAGAGACATTTTCGCCGTCGCGGCTCTGGCCATGGCCGCTGT
FD988175       --> TATGTCGCCAGAGACATTTTCGCCGTCGCGGCTCTGGCCATGGCCGCTGT
FY434573       --> TATGTCGCCAGAGACATTTTCGCCGTCGCGGCTCTGGCCATGGCCGCTGT
EY931192       --> TATGTCGCCAGAGACATTCTCGCCGTCGCGGCTCTGGCCATGGCCGCTGT
FD981467       --> TATGTCGCCATAGACATTTTCGCCGTCGCGGCTCTGGCCATGGCCGCTGT
EX897898       --> TATGTCGCCAGAGACATTTTCGCCGTCGCGGCTCTGGCCATGGCCGCTGT
EV527695       --> .........................................GGCCGCTGT
FD563269       --> ..................................................
FD939308       --> ..................................................
EY898349       --> ..................................................
FD987431       --> ..................................................
EY917259       --> ..................................................

               301    -    351
UN09662        --> GTATTTTGATAGCTGGTTCCTCTGGCCACTCTACTGGGTTGCCCAAGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY436128       <-- ..................................................
EX901573       <-- ..................................................
EX776716       <-- ..................................................
EY909655       <-- ..................................................
FD546674       <-- ..................................................
FY445263       <-- ..................................................
FY428526       <-- ..................................................
EY902399       <-- ..................................................
FD977224       <-- ..................................................
FD566945       <-- ..................................................
FD984106       <-- ..................................................
FD935463       <-- ..................................................
EY912806       <-- ..................................................
FD550764       --> GTATTTCGATAGCTGGTTCCTCTGGCCACTCTACTGGGTTGCCCAAGGAA
FD988175       --> GTATTTTGATAGCTGGTTCCTCTGGCCACTCTACTGGGTTGCCCAAGGAA
FY434573       --> GTATTTTGATAGCTGGTTCCTCTGGCCACTCTACTGGGTTGCCCAAGGAA
EY931192       --> GTATTTTGATAGCTGGTTCCTCTGGCCACTCTACTGGGTTGCCCAAGGAA
FD981467       --> GTATTTTGATAGCTGGTTCCTCTGGCCACTCTACTGGGTTGCCCAAGGAA
EX897898       --> GTATTTTGATAGCTGGTTCCTCTGGCCACTCTACTGGGTTGCCCAAGGAA
EV527695       --> GTATTTTGATAGCTGGTTCCTCTGGCCACTCTACTGGGTTGCCCAAGGAA
FD563269       --> ..................................................
FD939308       --> ..................................................
EY898349       --> ..................................................
FD987431       --> ..................................................
EY917259       --> ..................................................

               351    -    401
UN09662        --> CCCTTTTCTGGGCCATCTTCGTTCTTGGCCACGACTGTGGGCACGGAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY436128       <-- ..................................................
EX901573       <-- ..................................................
EX776716       <-- ..................................................
EY909655       <-- ..................................................
FD546674       <-- ..................................................
FY445263       <-- ..................................................
FY428526       <-- ..................................................
EY902399       <-- ..................................................
FD977224       <-- ..................................................
FD566945       <-- ..................................................
FD984106       <-- ..................................................
FD935463       <-- ..................................................
EY912806       <-- ..................................................
FD550764       --> CCCTTTTCTGGGCCATCTTCGTTCTTGGCCACGACTATGGGCACGGAAGT
FD988175       --> CCCTTTTCTGGGCCATCTTCGTTCTTGGTCACGACTGTGGGCACGGAAGT
FY434573       --> CCCTTTTCTGGGCCATCTTCGTTCTTGGCCACGACTGTGGGCACGGGAGT
EY931192       --> CCCTTTTCTGGGCCATCTTCGTTCTTGGCCACGACTGTGGGCACGGAAGT
FD981467       --> CCCTTTTCTGGGCCATCTTCGTTCTTGGCCACGACTGTGGGCACGGAAGT
EX897898       --> CCCTTTTCTGGGCCATCTTCGTTCTTGGCCACGACTGTGGGCACGGAAGT
EV527695       --> CCCTTTTCTGGGCCATCTTCGTTCTTGGCCACGACTGTGGGCACGGAAGT
FD563269       --> ..................................................
FD939308       --> ..................................................
EY898349       --> ..................................................
FD987431       --> ..................................................
EY917259       --> ..................................................

               401    -    451
UN09662        --> TTCTCAGACATTCCTCTGCTGAACAGTGTGGTTGGTCACATTCTTCATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY436128       <-- ..................................................
EX901573       <-- ..................................................
EX776716       <-- ..................................................
EY909655       <-- ..................................................
FD546674       <-- ..................................................
FY445263       <-- ..................................................
FY428526       <-- ..................................................
EY902399       <-- ..................................................
FD977224       <-- ..................................................
FD566945       <-- ..................................................
FD984106       <-- ..................................................
FD935463       <-- ..................................................
EY912806       <-- ..................................................
FD550764       --> TTCTCAGACATTCCTCTGCTGAACAGTGTGGTTGGTCACATTCTTCATTC
FD988175       --> TTCTCAGACATTCCTCTGCTGAACAGTGTGGTTGGTCACATTCTTCATTC
FY434573       --> TTCTCAGACATTCCTCTGCTGAACAGTGTGGTTGGTCACATTCTTCATTC
EY931192       --> TTCTCAGACATTCCTCTGCTGAACAGTGTGGTTGGTCACATTCTTCATTC
FD981467       --> TTCTCAGACATTCCTCTGCTGAACAGTGTGGTTGGTCACATTCTTCATTC
EX897898       --> TTCTCAGACATTCCTCTGCTGAACAGTGTGGTTGGTCACATTCTTCATTC
EV527695       --> TTCTCAGACATTCCTCTGCTGAACAGTGTGGTTGGTCACATTCTTCATTC
FD563269       --> ..................................................
FD939308       --> ..................................................
EY898349       --> ..................................................
FD987431       --> ..................................................
EY917259       --> ..................................................

               451    -    501
UN09662        --> ATTCATCCTCGTTCCTTACCATGGTTGGAGAATAAGCCATCGGACACACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY436128       <-- ..................................................
EX901573       <-- ..................................................
EX776716       <-- ..................................................
EY909655       <-- ..................................................
FD546674       <-- ..................................................
FY445263       <-- ..................................................
FY428526       <-- ..................................................
EY902399       <-- ..................................................
FD977224       <-- ..................................................
FD566945       <-- ..................................................
FD984106       <-- ..................................................
FD935463       <-- ..................................................
EY912806       <-- ..................................................
FD550764       --> ATTCATCCTCGTTCCTTACCATGGTTGGAGAATAAGCCATCGGACACACC
FD988175       --> ATTCATCCTCGTTCCTTACCATGGTTGGAGAATAAGCCATCGGACACACC
FY434573       --> ATTCATCCTCGTTCCTTACCATGGTTGGAGAATAAGCCATCGGACACACC
EY931192       --> ATTCATCCTCGTTCCTTACCATGGTTGGAGAATAAGCCATCGGACACACC
FD981467       --> ATTCATCCTCGTTCCTTACCATGGTTGGAGAATAAGCCATCGGACACACC
EX897898       --> ATTCATCCTCGTTCCTTACCATGGTTGGAGAATAAGCCATCGGACACACC
EV527695       --> ATTCATCCTCGTTCCTTACCATGGTTGGAGAATAAGCCATCGGACACACC
FD563269       --> ..................................................
FD939308       --> ..................................................
EY898349       --> ..................................................
FD987431       --> ..................................................
EY917259       --> ..................................................

               501    -    551
UN09662        --> ACCAGAACCATGGCCATGTTGAAAACGACGAGTCTTGGGTTCCGCTGCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY436128       <-- ..CAGAACCATGGCCATGTTGAAAACGACGAGTCTTGGGTTCCGCTGCCA
EX901573       <-- ......................AAACGACGAGTCTTGGGTTCCGCTGCCA
EX776716       <-- ...................................TGGGT-CCGCTGCCA
EY909655       <-- ...............................................CCA
FD546674       <-- ..................................................
FY445263       <-- ..................................................
FY428526       <-- ..................................................
EY902399       <-- ..................................................
FD977224       <-- ..................................................
FD566945       <-- ..................................................
FD984106       <-- ..................................................
FD935463       <-- ..................................................
EY912806       <-- ..................................................
FD550764       --> ACCAGAACCATGGCCATGTTGAAAACGACGAGTCTTGGGTTCCGCTACCA
FD988175       --> ACCATAACCATGGCCATGTTGAAAACGACGAGTCTTGGGTTCCGCTGCCA
FY434573       --> ACCAGAACCATGGCCATGTTGAAAACGACGAGTCTTGGGTTCCGCTGCCA
EY931192       --> ACCAGAACCATGGCCATGTTGAAAACGACGAGTCTTGGGTTCCGCTGCCA
FD981467       --> ACCAGAACCATGGCCATGTTGAAAACGATGAGTCTTGGGTTCCGCTACCA
EX897898       --> ACCAGAACCATGGCCATGTTGAAAACGACGAGTCTTGGGTTCCGCTGCCA
EV527695       --> ACCAGAACCATGGCCATGTTGAAAACGACGAGTCTTGGGTTCCGCTGCCA
FD563269       --> ..................................................
FD939308       --> ..................................................
EY898349       --> ..................................................
FD987431       --> ..................................................
EY917259       --> ..................................................

               551    -    601
UN09662        --> GAAAAGTTGTACAAGAGCTTGCCCCATAGTACTCGGATGCTCAGATACAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY436128       <-- GAAAAGTTGTACAAGAGCTTGCCCCATAGTACTCGGATGCTCAGATACAC
EX901573       <-- GAAAAGTTGTACAAGAGCTTGCCCCATAGTACTCGGATGCTCAGATACAC
EX776716       <-- GAAAAGTTGTACAAGAGCTTGCCCCATAGTACTCGGATGCTCAGATACAC
EY909655       <-- GAAAAGTTGTACAAGAGCTTGCCCCATAGTACTCGGATGCTCAGATACAC
FD546674       <-- GAAAAGTTGTACA-GAGCTTGCCCCATAGTACTCGGATGCTCAGATACAC
FY445263       <-- GAAAAGTTGTACAAGAGCTTGCCCCATAGTACTCGGATGCTCAGATACAC
FY428526       <-- ......................CCCATAGTACTCGGATGCTCAGATACAC
EY902399       <-- ..................................................
FD977224       <-- ..................................................
FD566945       <-- ..................................................
FD984106       <-- ..................................................
FD935463       <-- ..................................................
EY912806       <-- ..................................................
FD550764       --> GAAAAGTTGTACAAGAGCTTGCCCCATAGTACTCGGATGCTCAGATACAC
FD988175       --> GAAAAGTTGTACAATAGCTTGCCCCATAGTACTCGGATGCTCAGATACAC
FY434573       --> GAAAAGTTGTACAAGAGCTTGCCCCATAGTACTCGGATGCTCAGATACAC
EY931192       --> GAAAAGTTGTACAAGAGCTTGCCCCATAGTACTCGGATGCTCAGATACAC
FD981467       --> GAAAAGTTGTACAAGAGCTTGCCCCATAGTACTCGGATGCTCAGATACAC
EX897898       --> GAAAAGTTGTACAAGAGCTTGCCCCATAGTACTCGGATGCTCAGATACAC
EV527695       --> GAAAAGTTGTACAAGAGCTTGCCCCATAGTACTCGGATGCTCAGATACAC
FD563269       --> ..................................................
FD939308       --> ..................................................
EY898349       --> ..................................................
FD987431       --> ..................................................
EY917259       --> ..................................................

               601    -    651
UN09662        --> TGTCCCTCTGCCCATGCTCGCTTACCCGATCTATCTGTGGTACAGAAGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY436128       <-- TGTCCCTCTGCCCATGCTCGCTTACCCGATCTATCTTTGGTACAGAAGTC  Raphanus sativus cv GSK3-1
EX901573       <-- TGTCCCTCTGCCCATGCTCGCTTACCCGATCTATCTTTGGTACAGAAGTC  Raphanus sativus cv Early Scarlet Globe
EX776716       <-- TGTCCCTCTGCCCATGCTCGCTTACCCGATCTATCTGTGGTACAGAAGTC  Raphanus raphanistrum subsp. landra
EY909655       <-- TGTCCCTCTGCCCATGCTCGCTTACCCGATCTATCTGTG-TACAGAAGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD546674       <-- TGTCCCTCTGCCCATGCTCGCTTACCCGATCTATCTGTGGTACAGAAGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FY445263       <-- TGTCCCTCTGCCCATGCTCGCTTACCCGATCTATCTTTGGTACAGAAGTC  Raphanus sativus cv GSK3-1
FY428526       <-- TGTCCCTCTGCCCATGCTCGCTTACCCGATCTATCTTTGGTACAGAAGTC  Raphanus sativus cv GSK3-1
EY902399       <-- .............................TCTATCTGTGGTACAGAAGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD977224       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD566945       <-- ..................................................  Raphanus sativus var. oleiformis
FD984106       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD935463       <-- ..................................................  Raphanus sativus var. oleiformis
EY912806       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD550764       --> TGTCCCTCTGCCCATGCTCGCTTACCCGATCTATCTGTGGTACAGAAGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD988175       --> TGTCCCTCTGCCCATGCTCGCTTACCCGATCTATCTGTGGTACAGAAGTC  Raphanus raphanistrum subsp. landra
FY434573       --> TGTCCCTCTGCCCATGCTCGCTTACCCGATCTATCTTTGGTACAGAAGTC  Raphanus sativus cv GSK3-1
EY931192       --> TGTCCCTCTGCCCATGCTCGCTTACCCGATCTATCTTTGGTACAGAAGTC  Raphanus sativus var. oleiformis
FD981467       --> TGTCCCTCTGCCCATGCTCGCTTACCCGATCTATCTGTGGTACAGAAGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX897898       --> TGTCCCTCTGCCCATGCTCGCTTACCCGATCTATCTTTGGTACAGAAGTC  Raphanus sativus cv Early Scarlet Globe
EV527695       --> TGCCCCTCTGCCCATGCTCGCTTACCCGATCTATCTGTGGTACAGAAGTC  Raphanus raphanistrum subsp. maritimus
FD563269       --> ...................................gGTGGTACAGAAGTC  Raphanus sativus var. oleiformis
FD939308       --> ...................................gGTGGTACAGAAGTC  Raphanus sativus var. oleiformis
EY898349       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD987431       --> ..................................................  Raphanus raphanistrum subsp. landra
EY917259       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               651    -    701
UN09662        --> CTGGAAAAGAAGGGTCACATTATAACCCATACAGTAGTTTATTTGCTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY436128       <-- CTGGAAAAGAAGGGTCACATTATAACCCATACAGTAGTTTATTTGCTCCA
EX901573       <-- CTGGAAAAGAAGGGTCACATTATAACCCATACAGTAGTTTATTTGCTCCA
EX776716       <-- CTGGAAAAGAAGGGTCACATTATAACCCATACAGTAGTTTATTTGCTCCA
EY909655       <-- CTGGAAAAGAAGGGTCACATTATAACCCATACAGTAGTTTATTTGCTCCA
FD546674       <-- CTGGAAAAGAAGGGTCACATTATAACCCATACAGTAGTTTATTTGCTCCA
FY445263       <-- CTGGAAAAGAAGGGTCACATTATAACCCATACAGTAGTTTATTTGCTCCA
FY428526       <-- CTGGAAAAGAAGGGTCACATTATAACCCATACAGTAGTTTATTTGCTCCA
EY902399       <-- CTGGAAAAGAAGGGTCACATTATAACCCATACAGTAGTTTATTTGCTCCA
FD977224       <-- ..................................................
FD566945       <-- ..................................................
FD984106       <-- ..................................................
FD935463       <-- ..................................................
EY912806       <-- ..................................................
FD550764       --> CTGGAAAA..........................................
FD988175       --> CTGGAAAAGAAGGGTCACATTATAACCCATACAGTAGTTTATTTGCTCCA
FY434573       --> CTGGAAAAGAAGGGTCACATTATAACCCATACAGTAGTTTATTTGCTCCA
EY931192       --> CTGGAAAAGAAGGGTCACATTATAACCCATACAGTAGTTTATTTGCTCCA
FD981467       --> CTGGAAAAGAAGGGTCACATTATAACCCATACAGTAGTTTATTTGCTCCA
EX897898       --> CTGGAAAAGAAGGGTCACATTATAACCCATACAGTAGTTTATTTGCTCCA
EV527695       --> CTGGAAAAGAAGGGTCACATTATAACCCATACAGTAGTTT----GCTCCA
FD563269       --> CTGGAAAAGAAGGGTCACATTATAACCCATACAGTAGTTTATTTGCTCCA
FD939308       --> CTGGAAAAGAAGGGTCACATTATAACCCATACAGTAGTTTATTTGCTCCA
EY898349       --> ..................................................
FD987431       --> ..................................................
EY917259       --> ..................................................

               701    -    751
UN09662        --> AGCGAGAGGAAGCTTATTGCAACTTCAACTACTTGCTGGTCCATAATGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY436128       <-- AGCGAGAGGAAGCTTATTGCAACTTCAACTACTTGCTGGTCCATAATGCT
EX901573       <-- AGCGAGAGGAAGCTTATTGCAACTTCAACTACTTGCTGGTCCATAATGCT
EX776716       <-- AGCGAGAGGAAGCTTATTGCAACTTCAACTACTTGCTGGTCCATAATGCT
EY909655       <-- AGCGAGAGGAAGCTTATTGCAACTTCAACTACTTGCTGGTCCATAATGCT
FD546674       <-- AGCGAGAGGAAGCTTATTGCAACTTCAACTACTTGCTGGTCCATAATGCT
FY445263       <-- AGCGAGAGGAAGCTTATTGCAACTTCAACTACTTGCTGGTCCATAATGCT
FY428526       <-- AGCGAGAGGAAGCTTATTGCAACTTCAACTACTTGCTGGTCCATAATGCT
EY902399       <-- AGCGAGAGGAAGCTTATTGCAACTTCAACTACTTGCTGGTCCATAATGCT
FD977224       <-- ..................................................
FD566945       <-- ..................................................
FD984106       <-- ..................................................
FD935463       <-- ..................................................
EY912806       <-- ..................................................
FD550764       --> ..................................................
FD988175       --> AGCGAGAGGAAGCTTATTGCAACTTCAA......................
FY434573       --> AGCGAGAGGAAGCTTATTGCAACTTCAACTACTTGCTGGTCCATAATGCT
EY931192       --> AGCGAGAGGAAGCTTATTGCAACTTCAACTACTTGCTGGTCCATAATGCT
FD981467       --> AGCGAGAGGAAGCTTATTGCAACTTCAACTACTTGCTGGTCCATAATGCT
EX897898       --> AGCGAGAGGAAGCTTATTGCAACTTCAACTACTTGCTGGTCCATAATGCT
EV527695       --> AGTGAGAGGAAGCTTATTGCAACTTCAACTACTTGCTGGTCCATAATGCT
FD563269       --> AGCGAGAGGAAGCTTATTGCAACTTCAACTACTTGCTGGTCCATAATGCT
FD939308       --> AGCGAGAGGAAGCTTATTGCAACTTCAACTACTTGCTGGTCCATAATGCT
EY898349       --> .........gAGCTTATTGCAACTTCAACTACTTGCTGGTCCATAATGCT
FD987431       --> .........gAGCTTATTGCAACTTCAACTACTTGCTGGTCCATAATGCT
EY917259       --> ..................................................

               751    -    801
UN09662        --> GGCCACTCTTGTTTATCTATCGTTCCTCCTTGGTCCAGTCACAGTTCTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY436128       <-- GGCCACTCTTGTTTATCTATCGTTCCTCCTTGGTCCAGTCACAGTTCTCA
EX901573       <-- GGCCACTCTTGTTTATCTATCGTTCCTCCTTGGTCCAGTCACAGTTCTCA
EX776716       <-- GGCCACTCTTGTTTATCTATCGTTCCTCCTTGGTCCAGTCACAGTTCTCA
EY909655       <-- GGCCACTCTTGTTTATCTATCGTTCCTCCTTGGTCCAGTCACAGTTCTCA
FD546674       <-- GGCCACTCTTGTTTATCTATCGTTCCTCCTTGGTCCAGTCACAGTTCTCA
FY445263       <-- GGCCACTCTTGTTTATCTATCGTTCCTCCTTGGTCCAGTCACAGTTCTCA
FY428526       <-- GGCCACTCTTGTTTATCTATCGTTCCTCCTTGGTCCAGTCACAGTTCTCA
EY902399       <-- GGCCACTCTTGCTTATCTATCGTTCCTCCTTGGTCCAGTCACAGTTCTCA
FD977224       <-- ......................TTCCTCCTTGGTCCAGTCACAGTTCTCA
FD566945       <-- ..................................................
FD984106       <-- ..................................................
FD935463       <-- ..................................................
EY912806       <-- ..................................................
FD550764       --> ..................................................
FD988175       --> ..................................................
FY434573       --> GGCCACTCTTGTTTATCTATCGTTCCTCCTTGGTCCAGTCACAGTTCTCA
EY931192       --> GGCCACTCTTGTTTATCTATCGTTCCTCCTTGGTC...............
FD981467       --> GGCCACTCTTGTTTATCTATCGTTCCTCCTTGGTCCAGTCACAGTTCTCA
EX897898       --> GGCCACTCTTGTTTATCTATCGTTCCTCCTTGGTCCAGTCACAGTTCTCA
EV527695       --> GGCCACTCTTGTTTATCTATCGTTCCTCCTTGGTCCAGTCACAGTTCTCA
FD563269       --> GGCCACTCTTGTTTATCTATCGTTCCTCCTTGGTCCAGTCACAGTTCTCA
FD939308       --> GGCCACTCTTGTTTATCTATCGTTCCTCCTTGGTCCAGTCACAGTTCTCA
EY898349       --> GGCCACTCTTGTTTATCTATCGTTCCTCCTTGGTCCAGTCACAGTTCTCA
FD987431       --> GGCCACTCTTGTTTATCTATCGTTCCTCCTTGGTCCAGTCACAGTTCTCA
EY917259       --> ..................................................

               801    -    851
UN09662        --> AAGTCTATGGTGTTCCTTACATTATCTTTGTGATGTGGTTGGACGCTGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY436128       <-- AAGTCTATGGTGTTCCTTACATTATTTTTGTGATGTGGTTGGACGCTGTC
EX901573       <-- AAGTCTATGGTGTTCCTTACATTATCTTTGTGATGTGGTTGGACGCTGTC
EX776716       <-- AAGTCTATGGTGTTCCTTACATTATCTTTGTGATGTGGTTGGACGCTGTC
EY909655       <-- AAGTCTATGGTGTTCCTTACATTATCTTTGTGATGTGGTTGGACGCTGTC
FD546674       <-- AAGTCTATGGTGTTCCTTACATTATCTTTGTGATGTGGTTGGACGCTGTC
FY445263       <-- AAGTCTATGGTGTTCCTTACATTATTTTTGTGATGTGGTTGGACGCTGTC
FY428526       <-- AAGTCTATGGTGTTCCTTACATTATTTTTGTGATGTGGTTGGACGCTGTC
EY902399       <-- AAGTCTATGGTGTTCCTTACATTATCTTTGTGATGTGGTTGGGCGCTGTC
FD977224       <-- AAGTCTATGGTGTTCCTTACATTATCTTTGTGATGTGGTTGGACGCTGTC
FD566945       <-- ......ATGGTGTTCCTTACATTATCTTTGTGATGTGGTTGGACGCTGTC
FD984106       <-- .........................CTTTGTGATGTGGTTGGACGCTGTC
FD935463       <-- ..............................................TGTC
EY912806       <-- ..................................................
FD550764       --> ..................................................
FD988175       --> ..................................................
FY434573       --> AAGTCTATGGTGTTCCTTACATTATTTTTGTGATGTGGTTGGACGCTGTC
EY931192       --> ..................................................
FD981467       --> AAGTCTATGGTGTTCCTTACATTATCTTTGTGATGTGGTTGGACGCTGTC
EX897898       --> AAGTCTATGGTGTTCCTTACATTATCTTTGTGATGTGGTTGGACGCTGTC
EV527695       --> AAGTCTATGGTGTTCCTTACATTATCTTTGTGATGTGGTTGGACGCTGTC
FD563269       --> AAGTCTATGGTGTTCCTTACATTATCTTTGTGATGTGGTTGGACGCTGTC
FD939308       --> AAGTCTATGGTGTTCCTTACATTATCTTTGTGATGTGGTTGGACGCTGTC
EY898349       --> AAGTCTATGGTGTTCCTTACATTATCTTTGTGATGTGGTTGGACGCTGTC
FD987431       --> AAGTCTATGGTGTTCCTTACATTATCTTTGTGATGTGGTTGGACGCTGTC
EY917259       --> ..................................................

               851    -    901
UN09662        --> ACGTACTTGCATCATCATGGTCATGATGAGAAGTTGCCGTGGTACAGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY436128       <-- ACGTACTTGCATCATCATGGTCATGATGAGAAGTTGCCGTGGTACAGAGG
EX901573       <-- ACGTACTTGCATCATCATGGTCATGATGAGAAGTTGCCGTGGTACAGAGG
EX776716       <-- ACGTACTTGCATCATCATGGTCATGATGAGAAGTTGCCGTGGTACAGAGG
EY909655       <-- ACGTACTTGCATCATCATGGTCATGATGAGAAGTTGCCGTGGTACAGAGG
FD546674       <-- ACGTACTTGCATCATCATGGTCATGATGAGAAGTTGCCGTGGTACAGAGG
FY445263       <-- ACGTACTTGCATCATCATGGTCATGATGAGAAGTTGCCGTGGTACAGAGG
FY428526       <-- ACGTACTTGCATCATCATGGTCATGATGAGAAGTTGCCGTGGTACAGAGG
EY902399       <-- ACGTACTTGCATCATCATGGTCATGATGAGAAGTTGCCGTGGTACAGAGG
FD977224       <-- ACGTACTTGCATCATCATGGTCATGATGAGAAGTTGCCGTGGTACAGAGG
FD566945       <-- ACGTACTTGCATCATCATGGTCATGATGAGAAGTTGCCGTGGTACAGAGG
FD984106       <-- ACGTACTTGCATCATCATGGTCATGATGAGAAGTTGCCGTGGTACAGAGG
FD935463       <-- ACGTACTTGCATCATCATGGTCATGATGAGAAGTTGCCGTGGTACAGAGG
EY912806       <-- ......gTGCATCATCATGGTCATGATGAGAAGTCGCCGTGGTACAGAGG
FD550764       --> ..................................................
FD988175       --> ..................................................
FY434573       --> ACGTACTTGCATCATCATGGTCATGATGAGAAGTTGCCGTG.........
EY931192       --> ..................................................
FD981467       --> ACGTACTTGCATCATCATGGTCATGATGAGAAGTTGCCGT..........
EX897898       --> ACGTACTTGCATCATCATGGTCATGAT.......................
EV527695       --> ACGTACTTGCATCATCATGGTCATGATGAGAAGTTGCCGTGGTACAGAGG
FD563269       --> ACGTACTTGCATCATCATGGTCATGATGAGAAGTTGCCGTGGTACAGAGG
FD939308       --> ACGTACTTGCATCATCATGGTCATGATGAGAAGTTGCCGTGGTACAGAGG
EY898349       --> ACGTACTTGCATCATCATGGTCATGATGAGAAGTTGCCGTGGTACAGAGG
FD987431       --> ACGTACTTGCATCATCATGGTCATGATGAGAAGTTGCCGTGGTACAGAGG
EY917259       --> ......gTGCATCATCATGGTCATGATGAGAAGTCGCCGTGGTACAGAGG

               901    -    951
UN09662        --> CAAGGAATGGAGTTATTTACGTGGAGGATTAACAACTATTGATAGAGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY436128       <-- CAAGGAATGGAGTTATTTACGTGGAGGATTAACAACTATTGATAGAGATT
EX901573       <-- CAAGGAATGGAGTTATTTACGTGGAGGATTAACAACTATTGATAGAGATT
EX776716       <-- CAAGGAATGGAGTTATTTACGTGGAGGATTAACAACTATTGATAGAGATT
EY909655       <-- CAAGGAATGGAGTTATTTACGTGGAGGATTAACAACTATTGATAGAGATT
FD546674       <-- CAAGGAATGGAGTTATTTACGTGGAGGATTAACAACTATTGATAGAGATT
FY445263       <-- CAAGGAATGGAGTTATTTACGTGGAGGATTAACAACTATTGATAGAGATT
FY428526       <-- CAAGGAATGGAGTTATTTACGTGGAGGATTAACAACTATTGATAGAGATT
EY902399       <-- CAAGGAATGGAGTTATTTACGTGGAGGATTAACAACTATTGATAGAGATT
FD977224       <-- CAAGGAATGGAGTTATTTACGTGGAGGATTAACAACTATTGATAGAGATT
FD566945       <-- CAAGGAATGGAGTTATTTACGTGGAGGATTAACAACTATTGATAGAGATT
FD984106       <-- CAAGGAATGGAGTTATTTACGTGGAGGATTAACAACTATTGATAGAGATT
FD935463       <-- CAAGGAATGGAGTTATTTACGTGGAGGATTAACAACTATTGATAGAGATT
EY912806       <-- CAAGGAATGGAGTTATCTACGTGGAGGATTAACAACTATTGATAGAGATT
FD550764       --> ..................................................
FD988175       --> ..................................................
FY434573       --> ..................................................
EY931192       --> ..................................................
FD981467       --> ..................................................
EX897898       --> ..................................................
EV527695       --> CAAGGAATGGAGTTATTTACGTGGAGGATTAACAACTATTGATAGAG...
FD563269       --> CAAGGAATGGAGTTATTTACGTGGAGGATTAACAACTATTGATAGAGATT
FD939308       --> CAAGGAATGGAGTTATTTACGTGGAGGATTAACAACTATTGATAGAGATT
EY898349       --> CAAGGAATGGAGTTATTTACGTGGAGGATTAACAACTATTGATAGAGATT
FD987431       --> CAAGGAATGGAGTTATTTACGTGGAGGATTAACAACTATTGATAGAGATT
EY917259       --> CAAGGAATGGAGTTATCTACGTGGAGGATTAACAACTATTGATAGAGATT

               951    -   1001
UN09662        --> ATGGAATCTTCAACAACATCCATCACGACATTGGAACTCACGTGATCCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY436128       <-- ATGGAATCTTCAACAACATCCATCACGACATTGGAACTCACGTGATCCAT
EX901573       <-- ATGGAATCTTCAACAACATCCATCACGACATTGGAATTCACGTGATCCAT
EX776716       <-- ATGGAATCTTCAACAACATCCATCACGACATTGGAACTCACGTGATCCAT
EY909655       <-- ATGGAATCTTCAACAACATCCATCACGACATTGGAACTCACGTGATCCAT
FD546674       <-- ATGGAATCTTCAACAACATCCATCACGACATTGGAACTCACGTGATCCAT
FY445263       <-- ATGGAATCTTCAACAACATCCATCACGACATTGGAACTCACGTGATCCAT
FY428526       <-- ATGGAATCTTCAACAACATCCATCACGACATTGGAACTCACGTGATCCAT
EY902399       <-- ATGGAATCTTCAACAACATCCATCACGACATTGGAACTCACGTGATCCAT
FD977224       <-- ATGGAATCTTCAACAACATCCATCACGACATTGGAACTCACGTGATCCAT
FD566945       <-- ATGGAATTTTCAACAACATCCATCACGACATTGGAACTCACGTGATCCAT
FD984106       <-- ATGGAATTTTCAACAACATCCATCACGACATTGGAACTCACGTGATCCAT
FD935463       <-- ATGGAATTTTCAACAACATCCATCACGACATTGGAACTCACGTGATCCAT
EY912806       <-- ATGGAATCTTCAACAACATCCATCACGACATTGGAACTCACGTGATCCAT
FD550764       --> ..................................................
FD988175       --> ..................................................
FY434573       --> ..................................................
EY931192       --> ..................................................
FD981467       --> ..................................................
EX897898       --> ..................................................
EV527695       --> ..................................................
FD563269       --> ATGGAATCTTCAACAACATCCATCACGACATTGGAACTCACGTGATCCAT
FD939308       --> ATGGAATCTTCAACAACATCCATCACGACATTGGAACTCACGTGATCCAT
EY898349       --> ATGGAATCTTCAACAACATCCATCACGACATTGGAACTCACGTGATCCAT
FD987431       --> ATGGAATCTTCAACAACATCCATCACGACATTGGAACTCACGTGATCCAT
EY917259       --> ATGGAATCTTCAACAACATCCATCACGACATTGGAACTCACGTGATCCAT

               1001   -   1051
UN09662        --> CATCTTTTCCCACAAATCCCTCACTATCACTTGGTCGACGCCACGAAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY436128       <-- CATCTTTTCCCACAAATCCCTCACTACCACTTGGTCGACGCCACGAAAGC
EX901573       <-- CATCTTTTCCCACAAATCCCTCACTATCACTTGGTCGACGCCACGAAAGC
EX776716       <-- CATCTTTTCCCACAAATCCCTCACTATCACTTGGTCGACGCCACGAAAGC
EY909655       <-- CATCTTTTCCCACAAATCCCTCACTATCACTTGGTCGACGCCACGAAAGC
FD546674       <-- CATCTTTTCCCACAAATCCCTCACTATCACTTGGTCGACGCCACGAAAGC
FY445263       <-- CATCTTTTCCCACAAATCCCTCACTACCACTTGGTCGACGCCACGAAAGC
FY428526       <-- CATCTTTTCCCACAAATCCCTCACTACCACTTGGTCGACGCCACGAAAGC
EY902399       <-- CATCTTTTCCCACAAATCCCTCACTATCACTTGGTCGACGCCACGAAAGC
FD977224       <-- CATCTTTTCCCACAAATCCCTCACTATCACTTGGTCGACGCCACGAAAGC
FD566945       <-- CATTTTTTCCCACAAATCCCTCACTATCACTTGGTGGACGCCACGAAAGC
FD984106       <-- CATCTTTTCCCACAAATCCCTCACTATCACTTGGTCGACGCCACGAAAGC
FD935463       <-- CATTTTTTCCCACAAATCCCTCACTATCACTTGGTGGACGCCACGAAAGC
EY912806       <-- CATCTTTTCCCACAAATCCCTCACTATCACTTGGTCGACGCCACGAAAGC
FD550764       --> ..................................................
FD988175       --> ..................................................
FY434573       --> ..................................................
EY931192       --> ..................................................
FD981467       --> ..................................................
EX897898       --> ..................................................
EV527695       --> ..................................................
FD563269       --> CATCTTTTCCCACAAATCCCTCACTATCACTTGGTCGACGCCACGAAAGC
FD939308       --> CATCTTTTCCCACAAATCCCTCACTATCACTTGGTCGACGCCACGAAAGC
EY898349       --> CATCTTTTCCCACAAATCCCTCACTATCACTTGGTCGACGCTACGAAAGC
FD987431       --> CATCTTTTCCCACAAATCCCTCACTATCACTTGGTCGACGCCACGAAAGC
EY917259       --> CATCTTTTCCCACAAATCCCTCACTATCACTTGGTCGACGCCACGAAAGC

               1051   -   1101
UN09662        --> AGCTAAACATGTGCTGGGAAGATACTACAGAGAGCCGAAGACGTCAGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY436128       <-- AGCTAAACATGTGCTGGGAAGATACTACAGAGAGCCGAAGACGTCAGGAG
EX901573       <-- AGCTAAACATGTGCTGGGAAGATACTACAGAGAGCCGAAGACGTCAGGAG
EX776716       <-- AGCTAAACATGTGCTGGGAAGATACTACAGAGAGCCGAAGACGTCAGGAG
EY909655       <-- AGCTAAACATGTGCTGGGAAGATACTACAGAGAGCCGAAGACGTCAGGAG
FD546674       <-- AGCTAAACATGTGCTGGGAAGATACTACAGAGAGCCGAAGACGTCAGGAG
FY445263       <-- AGCTAAACATGTGCTGGGAAGATACTACAGAGAGCCGAAGACGTCAGGAG
FY428526       <-- AGCTAAACATGTGCTGGGAAGATACTACAGAGAGCCGAAGACGTCAGGAG
EY902399       <-- AGCTAAACATGTGCTGGGAAGATACTACAGAGAGCCGAAGACGTCAGGAG
FD977224       <-- AGCTAAACATGTGCTGGGAAGATACTACAGAGAGCCGAAGACGTCAGGAG
FD566945       <-- AGCTAAACATGTGCTGGGAAGATACTACAGAGAGCCGAAGACGTCAGGAG
FD984106       <-- AGCTAAACATGTGCTGGGAAGATACTACAGAGAGCCGAAGACGTCAGGAG
FD935463       <-- AGCTAAACATGTGCTGGGAAGATACTACAGAGAGCCGAAGACGTCAGGAG
EY912806       <-- AGCTAAACATGTGCTGGGAAGATACTACAGAGAGCCGAAGACGTCAGGAG
FD550764       --> ..................................................
FD988175       --> ..................................................
FY434573       --> ..................................................
EY931192       --> ..................................................
FD981467       --> ..................................................
EX897898       --> ..................................................
EV527695       --> ..................................................
FD563269       --> AGCTAAACATGTGCTGGGAAGATACTACAGAGAGCCGAAGACGTCAGGAG
FD939308       --> AGCTAAACATGTGCTGGGAAGATACTACAGAGAGCCGAAGACGTCAGGAG
EY898349       --> AGCTAAACATGTGCTGGGAAGATACTACAGAGAGCCGAAGACGTCAGGAG
FD987431       --> AGCTAAACATGTGCTGGGAAGATACTACAGAGAGCCGAAGACGTCAGGAG
EY917259       --> AGCTAAACATGTGCTGGGAAGATACTACAGAGAGCCGAAGACGTCAGGAG

               1101   -   1151
UN09662        --> CAATACCGATTCACTTGGTGGAGAGTTTGGTCGCAAGTATTAAAAAAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY436128       <-- CAATACCGATTCACTTGGTGGAGAGTTTGGTCGCAAGTATTAAAAAAGAT
EX901573       <-- CAATACCGATTCACTTGGTGGAGAGTTTGGTCGCAAGTATTAAAAAAGAT
EX776716       <-- CAATACCGATTCACTTGGTGGAGAGTTTGGTCGCAAGTATTAAAAAAGAT
EY909655       <-- CAATACCGATTCACTTGGTGGAGAGTTTGGTCGCAAGTATTAAAAAAGAT
FD546674       <-- CAATACCGATTCACTTGGTGGAGAGTTTGGTCGCAAGTATTAAAAAAGAT
FY445263       <-- CAATACCGATTCACTTGGTGGAGAGTTTGGTCGCAAGTATTAAAAAAGAT
FY428526       <-- CAATACCGATTCACTTGGTGGAGAGTTTGGTCGCAAGTATTAAAAAAGAT
EY902399       <-- CAATACCGGTTCACTTGGTGGAGAGTTTGGTCGCAAGTATTAAAAAAGAT
FD977224       <-- CAATACCGATTCACTTGGTGGAGAGTTTGGTCGCAAGTATTAAAAAAGAT
FD566945       <-- CAATACCGATTCACTTGGTGGGGAGTTTGGTCGCAAGTATTAAAAAAGAT
FD984106       <-- CAATACCGATTCACTTGGTGGAGAGTTTGGTCGCAAGTATTAAAAAAGAT
FD935463       <-- CAATACCGATTCACTTGGTGGAGAGTTTGGTCGCAAGTATTAAAAAAGAT
EY912806       <-- CAATACTGATTCACTTGGTGGAGAGTTTGGTCGCAAGTATTAAAAAAGAT
FD550764       --> ..................................................
FD988175       --> ..................................................
FY434573       --> ..................................................
EY931192       --> ..................................................
FD981467       --> ..................................................
EX897898       --> ..................................................
EV527695       --> ..................................................
FD563269       --> CAATACCGATTCACTTGGTGGAGAGTTTGGTCGCAAGTATTAAAAAAGAT
FD939308       --> CAATACCGATTCACTTGGTGGAGAGTTTGGTCGCAAGTATTAAAAAAGAT
EY898349       --> CAATACCGATTCACTTGGTGGAGAGTTTGGTCGCAAGTATTAAAAAAGAT
FD987431       --> CAATACCGATTCACTTGGTGGAGAGTTTGGTCGCAAGTATTAAAAAAGAT
EY917259       --> CAATACTGATTCACTTGGTGGAGAGTTTGGTCGCAAGTATTAAAAAAGAT

               1151   -   1201
UN09662        --> CACTACGTCAGTGACACTGGTGATATTGTCTTCTACGAGACAGATCCAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY436128       <-- CACTACGTCAGTGACACTGGTGATATTGTCTTCTACGAGACAGATCCAGA
EX901573       <-- CACTACGTCAGTGACACTGGTGATATTGTCTTTTACGAGACAGATCCAGA
EX776716       <-- CACTACGTCAGTGACACTGGTGATATTGTCTTCTACGAGACAGATCCAGA
EY909655       <-- CACTACGTCAGTGACACTGGTGATATTGTCTTCTACGAGACAGATCCAGA
FD546674       <-- CACTACGTCAGTGACACTGGTGATATTGTCTTTTACGAGACAGATCCAGA
FY445263       <-- CACTACGTCAGTGACACTGGTGATATTGTCTTCTACGAGACAGATCCAGA
FY428526       <-- CACTACGTCAGTGACACTGGTGATATTGTCTTCTACGAGACAGATCCAGA
EY902399       <-- CACTACGTCAGTGACACTGGTGATATTGTCTTCTACGAGACAGATCCAGA
FD977224       <-- CACTACGTCAGTGACACTGGTGATATTGTCTTCTACGAGACAGATCCAGA
FD566945       <-- CACTACGTCAGTGACACTGGTGATATTGTTTTTTACGAGACAGATCCAGA
FD984106       <-- CACTACGTCAGTGACACTGGTGATATTGTCTTCTACGAGACAGATCCAGA
FD935463       <-- CACTACGTCAGTGACACTGGTGATATTGTTTTTTACGAGACAGATCCAGA
EY912806       <-- CACTACGTCAGTGACACTGGTGATATTGTCTTCTACGAGACAGATCCAGA
FD550764       --> ..................................................
FD988175       --> ..................................................
FY434573       --> ..................................................
EY931192       --> ..................................................
FD981467       --> ..................................................
EX897898       --> ..................................................
EV527695       --> ..................................................
FD563269       --> CACTACGTCAGTGACACTGGTGATATTGTCTTCTACGAGACAGATCCAGA
FD939308       --> CACTACGTCAGTGACACTGGTGATATTGTCTTCTACGAGACAGATCCAGA
EY898349       --> CACTACGTCAGTGACACTGGTGATATTGTCTTCTACGAGACAGATCCAGA
FD987431       --> CACTACGTCAGTGACACTGGTGATATTGTCTTCTACGAGACAGATCCAGA
EY917259       --> CACTACGTCAGTGACACTGGTGATATTGTCTTCTACGAGACAGATCCAGA

               1201   -   1251
UN09662        --> TCTCTACGTTTATGCTTCTGACAAATCTAAAATCAATTAACCCTTCTCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY436128       <-- TCTCTACGTTTATGCTTCTGACAAATCTAAAATCAATTAACCCGTCTTCC
EX901573       <-- TCTCTACGTTTATGCTTCTGACAAATCTAAAATCAATTGACCCTTCTCCC
EX776716       <-- TCTCTACGTTTATGCTTCTGACAAATCTAAAATCAATTAACCCTTCTCCC
EY909655       <-- TCTCTACGTTTATGCTTCTGACAAATCTAAAATCAATTAACCCTTCTCCC
FD546674       <-- TCTCTACGTTTATGCTTCTGACAAATCTAAAATCAATTAACCCTTCTCCC
FY445263       <-- TCTCTACGTTTATGCTTCTGACAAATCTAAAATCAATTAACCCGTCTTCC
FY428526       <-- TCTCTACGTTTATGCTTCTGACAAATCTAAAATCAATTAACCCGTCTTCC
EY902399       <-- TCTCTACGTTTATGCTTCTGACAAATCTAAAATCAATTAACCCTTCTCCC
FD977224       <-- TCTCTACGTTTATGCTTCTGACAAATCTAAAATCAATTAACCCTTCTCCC
FD566945       <-- TTTTTACGTTTATGCTTTTGACAAATTTAAAATCAATTAACCCTTCTCCC
FD984106       <-- TCTCTACGTTTATGCTTCTGACAAATCTAAAATCAATTAACCCTTCTCCC
FD935463       <-- TTTTTACGTTTATGCTTTTGACAAATTTAAAATCAATTAACCCTTCTCCC
EY912806       <-- TCTCTACGTTTATGCTTCTGACAAATCTAAAATCAATCAACTCTTCTCCC
FD550764       --> ..................................................
FD988175       --> ..................................................
FY434573       --> ..................................................
EY931192       --> ..................................................
FD981467       --> ..................................................
EX897898       --> ..................................................
EV527695       --> ..................................................
FD563269       --> TCTCTACGTTTATGCTTCTGACAAATCTAAAATCAATTAACCCTTCTCCC
FD939308       --> TCTCTACGTTTATGCTTCTGACAAATCTAAAATCAATTAACCCTTCTCCC
EY898349       --> TCTCTACGTTTATGCTTCTGACAAATCTAAAATCAATTAACCCTTCTCCC
FD987431       --> TCTCTACGTTTATGCTTCTGACAAATCTAAAATCAATTAACCCTTCTCCC
EY917259       --> TCTCTACGTTTATGCTTCTGACAAATCTAAAATCAATCAACTCTTCTCCC

               1251   -   1301
UN09662        --> TGGCTCTATTAGGAATAAGCACTCCTTTTCTTTTGCTTATTTGTTGCTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY436128       <-- TAGCTCTATTAGGAATAAACACTCCTTTTCTTTTGCTTATTTGTTGCTGT
EX901573       <-- TGGCTCTATTAGGAATAAGCACTCCTTTTCTTTTGCTTATTTGTTGCTGT
EX776716       <-- TGGCTCTATTAGGAATAAGCACTCCTTTTCTTTTGCTTATTTGTTGCTGT
EY909655       <-- TGGCTCTATTAGGAATAAGCACTCCTTTTCTTTTGCTCATTTGTTGCTGT
FD546674       <-- TGGCTCTATTAGGAATAAGCACTCCTTTTCTTTTGCTTATTTGTTGCTGT
FY445263       <-- TAGCTCTATTAGGAATAAACACTCCTTTTCTTTTGCTTATTTGTTGCTGT
FY428526       <-- TAGCTCTATTAGGAATAAACACTCCTTTTCTTTTGCTTATTTGTTGCTGT
EY902399       <-- TGGCTCTATTAGGAATAAGCACTCCTTTTCTTTTGCTTATTTGTTGCTGT
FD977224       <-- TGGCTCTATTAGGAATAAGCACTCCTTTTCTTTTGCTTATTTGTTGCTGT
FD566945       <-- TGGCTTTATTAGGAATAAGCACTCCTTTTTTTTTGCTTATTTGTTGCTGT
FD984106       <-- TGGCTCTATTAGGAATAAGCACTCCTTTTCTTTTGCTTATTTGTTGCTGT
FD935463       <-- TGGCTTTATTAGGAATAAGCACTCCTTTTTTTTTGTTTATTTGTTGCTGT
EY912806       <-- TGGCTCTATTAGGAATAAGCACTCCTTTTCTTTTGCTTATTTGTTGCTGT
FD550764       --> ..................................................
FD988175       --> ..................................................
FY434573       --> ..................................................
EY931192       --> ..................................................
FD981467       --> ..................................................
EX897898       --> ..................................................
EV527695       --> ..................................................
FD563269       --> TGGCTCTATTAGGAATAAGCACTCCTTTTCTTTTGCTTATTTGTTGCTGT
FD939308       --> TGGCTCTATTAGGAATAAGCACTCCTTTTCTTTTGCTTATTTGTTGCTGT
EY898349       --> TGGCTCTATTAGGAATAAGCACTCCTTTTCTTTTGCTTATTTGTTGCTGT
FD987431       --> TGGCTCTATTAGGAATAAGCACTCCTTTTCTTTTGCTTATTTGTTGCTGT
EY917259       --> TGGCTCTATTAGGAATAAGCACTCCTTTTCTTTTGCTTATTTGTTGCTGT

               1301   -   1351
UN09662        --> TTT-AAGTTTAAAATGTACTCGTGGAACCTTTCTTTTTATTAATGTATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY436128       <-- TTT-AAGTTTAAAATGTACTCGTGAAACCTTT-TTTTTATTAATGTAT..  Raphanus sativus cv GSK3-1
EX901573       <-- TTT-AAGTTTAAAATGTACTCGTGGAACCTTTCTTTTTATTAATGTATTT  Raphanus sativus cv Early Scarlet Globe
EX776716       <-- TTT-AAGTTTAAAATGTACTCGTGGAACCTTTCTTTTTATTAATGTATTT  Raphanus raphanistrum subsp. landra
EY909655       <-- TTT-AAGTTTAAAATGTACTCGTGGAACCTTTCTTTTTATTAATGTATTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD546674       <-- TTT-AAGTTTAAAATGTACTCGTGGAACCTTTCTTTTTATTAATGTATTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FY445263       <-- TTT-AAGTTTAAAATGTACTCGTGAAACCTTT-TTTTTATTAATGTATTT  Raphanus sativus cv GSK3-1
FY428526       <-- TTT-AAGTTTAAAATGTACTCGTGAAACCTTT-TTTTTATTAATGTATTT  Raphanus sativus cv GSK3-1
EY902399       <-- TTT-AAGTTTAAAATGTACTCGTGGAACCTTTCTTTTTATTAATGTATTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD977224       <-- TTT-AAGTTTAAAATGTACTCGTGGAACCTTTCTTTTTATTAATGTATTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD566945       <-- TTTTAAGTTTAAAATGTACTCGTGGAACCTTTTTTTTTATTAATGTATTT  Raphanus sativus var. oleiformis
FD984106       <-- TTT-AAGTTTAAAATGTACTCGTGGAACCTTTCTTTTTATTAATGTATTT  Raphanus raphanistrum subsp. landra
FD935463       <-- TTTTAAGTTTAAAATGTACTCGTGGAACCTTTCTTTTTATTAATGTATTT  Raphanus sativus var. oleiformis
EY912806       <-- TTT-AAGTTTAAAATGTACTCGTGGAACCTTTCTTTTTATTAATGTATTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD550764       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD988175       --> ..................................................  Raphanus raphanistrum subsp. landra
FY434573       --> ..................................................  Raphanus sativus cv GSK3-1
EY931192       --> ..................................................  Raphanus sativus var. oleiformis
FD981467       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX897898       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV527695       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD563269       --> TTTTAAGTTTAAAATGTACTCGTGGAACCTTTCTTTT-ATTAATGTAT..  Raphanus sativus var. oleiformis
FD939308       --> TTTTAAGTTTAAAATGTACTCGTGGAACCTTTCTTTTTATTAATGTATTT  Raphanus sativus var. oleiformis
EY898349       --> TTTTAAGTTTAAAATGTACTCGTGGAACCTTTCTTTTTATTAATGTATTT  Raphanus raphanistrum subsp. maritimus
FD987431       --> TTT-AAGTTTAAAATGTACTCGTGGAACCTTTCTTTTTATTAATGTATTT  Raphanus raphanistrum subsp. landra
EY917259       --> TTT-AAGTTTAAAATGTACTCGTGGAACCTTTCTTTTTATTAATGTATTT  Raphanus raphanistrum subsp. raphanistrum (NY)

               1351   -   1401
UN09662        --> ACATTACAAAAAGTGGAAGTTTTGTTATCTTTTCCTTTAGTTGCAATCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY436128       <-- ..................................................
EX901573       <-- ACA...............................................
EX776716       <-- ACATTACc..........................................
EY909655       <-- ACATTACAAAAAGTGGAAGTTTTGTTATCTTTTCCTTTAGTTGCAATCAA
FD546674       <-- ACATTAC...........................................
FY445263       <-- ACATTATAAAAAGTGGAAGTTTTtat........................
FY428526       <-- ACATTATAAAAAGTGGAAGTTTTtt.........................
EY902399       <-- ACATTAC...........................................
FD977224       <-- ACATTACAAAAAGTGGAAGTTTTGTTATCTTTcc................
FD566945       <-- ACATTACAAAAAGTGGAAGTTTTGg.........................
FD984106       <-- ACATTAC...........................................
FD935463       <-- ACATTACAAAAAGTGGAAGTTTTGg.........................
EY912806       <-- ACATTACAGAAAGTGGAAGTTTTGTTATCTT...................
FD550764       --> ..................................................
FD988175       --> ..................................................
FY434573       --> ..................................................
EY931192       --> ..................................................
FD981467       --> ..................................................
EX897898       --> ..................................................
EV527695       --> ..................................................
FD563269       --> ..................................................
FD939308       --> ACATT.............................................
EY898349       --> ACA...............................................
FD987431       --> ACATTACAAAAAGTGGAAGTTTTGGTATCTTTTCCTTTAGTTGCAATCA.
EY917259       --> ACATTACAGAAAGTGGAAGTTTTGTTATCTT...................

               1401   -   1451
UN09662        --> AAGGATCTTTTCG
                   ~~~~~~~~~~~~~
FY436128       <-- .............
EX901573       <-- .............
EX776716       <-- .............
EY909655       <-- AAGGATCTTTTCG
FD546674       <-- .............
FY445263       <-- .............
FY428526       <-- .............
EY902399       <-- .............
FD977224       <-- .............
FD566945       <-- .............
FD984106       <-- .............
FD935463       <-- .............
EY912806       <-- .............
FD550764       --> .............
FD988175       --> .............
FY434573       --> .............
EY931192       --> .............
FD981467       --> .............
EX897898       --> .............
EV527695       --> .............
FD563269       --> .............
FD939308       --> .............
EY898349       --> .............
FD987431       --> .............
EY917259       --> .............