RadishBase

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Alignment for radish unigene UN09685

               1      -     51
UN09685        --> GTCATCTGGTAGATTAATATTAGATCCAACAACATTTTACACATCGGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY449610       <-- ..................................................
FY449144       <-- ..................................................
FY432479       <-- ..................................................
FY446199       <-- ..................................................
FY449366       <-- ..................................................
EV548207       <-- ..................................................
EV550305       <-- ..................................................
EX764698       <-- ..................................................
EV550496       <-- ..................................................
FY448551       <-- ..................................................
FY450804       <-- ..................................................
FY428813       <-- ..................................................
FY438871       <-- ..................................................
EV545785       --> GTCATCTGGTAGATTAATATTAGATCCAACAACATTTTACACATCGGATT
EX768567       --> GTCATCTGGTAGATTAATATTAGATCCAACAACATTTTACACATCGGATT
EV545620       --> ..................................................

               51     -    101
UN09685        --> TGCGTACCCTAAACAGAGCCAAGAGCCGGCGAGGTAACATATACCACCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY449610       <-- ..................................................
FY449144       <-- ..................................................
FY432479       <-- ..................................................
FY446199       <-- ..................................................
FY449366       <-- ..................................................
EV548207       <-- ..................................................
EV550305       <-- ..................................................
EX764698       <-- ..................................................
EV550496       <-- ..................................................
FY448551       <-- ..................................................
FY450804       <-- ..................................................
FY428813       <-- ..................................................
FY438871       <-- ..................................................
EV545785       --> TGCATACCCTAAACAGAGCCAAGAGCCGGCGAGGTAACATATACCACCCG
EX768567       --> TGCGTACCCTAAACAGAGCCAAGAGCCGGCGAGGTAACATATACCACCCG
EV545620       --> ..................................................

               101    -    151
UN09685        --> GAGCCATGAAACAGACATAACACAAACTTTTAAAGCTAACAAAGACAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY449610       <-- ..................................................
FY449144       <-- ..................................................
FY432479       <-- ..................................................
FY446199       <-- ..................................................
FY449366       <-- ..................................................
EV548207       <-- ..................................................
EV550305       <-- ..................................................
EX764698       <-- ..................................................
EV550496       <-- ..................................................
FY448551       <-- ..................................................
FY450804       <-- ..................................................
FY428813       <-- ..................................................
FY438871       <-- ..................................................
EV545785       --> GAGCCATGAAACAGACATAACACAAACTTTTAAAGCTAACAAAGACAAAT
EX768567       --> GAGCCATGAAACAGACATAACACAAACTTTTAAAGCTAACAAAGACAAAT
EV545620       --> ..................................................

               151    -    201
UN09685        --> AAAAACGTCGAGAAGCAGAATAGAAGATAGAAACTTCAGGAGAGGAGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY449610       <-- ..................................................
FY449144       <-- ..................................................
FY432479       <-- ..................................................
FY446199       <-- ..................................................
FY449366       <-- ..................................................
EV548207       <-- ..................................................
EV550305       <-- ..................................................
EX764698       <-- ..................................................
EV550496       <-- ..................................................
FY448551       <-- ..................................................
FY450804       <-- ..................................................
FY428813       <-- ..................................................
FY438871       <-- ..................................................
EV545785       --> AAAAACGTCGAGAAGCAGAATAGAAGATAGAAACTTCAGGAGAGGAGGAG
EX768567       --> AAAAACGTCGAGAAGCAGAATAGAAGATAGAAACTTCAGGAGAGGAGGAG
EV545620       --> ........................AGATAGAAACTTCAGGAGAGGAGGAG

               201    -    251
UN09685        --> TGCTCAACCTTTCACTCAAAGACGAGCTTACCTAACGGGAACTCATCCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY449610       <-- ..................................................
FY449144       <-- ..................................................
FY432479       <-- ..................................................
FY446199       <-- ..................................................
FY449366       <-- ..................................................
EV548207       <-- ..................................................
EV550305       <-- ..................................................
EX764698       <-- ..................................................
EV550496       <-- ..................................................
FY448551       <-- ..................................................
FY450804       <-- ..................................................
FY428813       <-- ..................................................
FY438871       <-- ..................................................
EV545785       --> TGCTCAACCTTTCACTCAAAGACGAGCTTACCTAACGGGAACTCATCCAC
EX768567       --> TGCTCAACCTTTCACTCAAAGACGAGCTTACCTAACGGGAACTCATCCAC
EV545620       --> TGCTCAACCTTTCACTCAAAGACGAGCTTACCTAACGGGAACTCATCCAC

               251    -    301
UN09685        --> AAATAGCACCAGATAAGAAGACCAAGGAGAGAGCCTAGAAGTACACGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY449610       <-- ..................................................
FY449144       <-- ..................................................
FY432479       <-- ..................................................
FY446199       <-- ..................................................
FY449366       <-- ..................................................
EV548207       <-- ..................................................
EV550305       <-- ..................................................
EX764698       <-- ..................................................
EV550496       <-- ..................................................
FY448551       <-- ..................................................
FY450804       <-- ..................................................
FY428813       <-- ..................................................
FY438871       <-- ..................................................
EV545785       --> AAATAGCACCAGATAAGAAGACCAAGGAGAGAGCCTAGAAGTACACGAAC
EX768567       --> AAATAGCACCAGATAAGAAGACCAAGGAGAGAGCCTAGAAGTACACGAAC
EV545620       --> AAATAGCACCAGATAAAAAGACCAAGGAGAGAGCCTAGAAGTACACGAAC

               301    -    351
UN09685        --> ATCACCAAAACATAACATAAACTGAACCGAGAGAGGTTAGAATCCTTAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY449610       <-- .......AAACATAATATAAACTGAACCGAGAGAGGTTAGAATCCTTAAC
FY449144       <-- ...........ATAATATAAACTGAACCGAGAGAGGTTAGAATCCTTAAC
FY432479       <-- ...................AACTGAACCGAGAGAGGTTAGAATCCTTAAC
FY446199       <-- ...................AACTGAACCGAGAGAGGTTAGAATCCTTAAC
FY449366       <-- ..................................................
EV548207       <-- ..................................................
EV550305       <-- ..................................................
EX764698       <-- ..................................................
EV550496       <-- ..................................................
FY448551       <-- ..................................................
FY450804       <-- ..................................................
FY428813       <-- ..................................................
FY438871       <-- ..................................................
EV545785       --> ATCACCAAAACATAACATAAACTGAACCGAGAGAGGTTAGAATCCTTAAC
EX768567       --> ATCACCAAAACATAACATAAACTGAACCGAGAGAGGTTAGAATCCTTAAC
EV545620       --> ATCACCAAAACATAACATAAACTGAACCGAGAGAGGTTAGAATCCTTAAC

               351    -    401
UN09685        --> CGTCGCTGAACACACCCTTCAATCCCAACTAAGTCTCGCCATTGGACCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY449610       <-- CGTCGCTGAACACACCCTTCAATCCCAACTAAGTCTCGCCATTGGACCTT
FY449144       <-- CGTCGCTGAACACACCCTTCAATCCCAACTAAGTCTCGCCATTGGACCTT
FY432479       <-- CGTCGCTGAACACACCCTTCAATCCCAACTAAGTCTCGCCATTGGACCTT
FY446199       <-- CGTCGCTGAACACACCCTTCAATCCCAACTAAGTCTCGCCATTGGACCTT
FY449366       <-- ...................CAATCCCAACTAAGTCTCGCCATTGGACCTT
EV548207       <-- ..................................................
EV550305       <-- ..................................................
EX764698       <-- ..................................................
EV550496       <-- ..................................................
FY448551       <-- ..................................................
FY450804       <-- ..................................................
FY428813       <-- ..................................................
FY438871       <-- ..................................................
EV545785       --> CGTCGCTGAACACACCCTTCAATCCCAACTAAGTCTCGCCATTGGACCTT
EX768567       --> CGTCGCTGAACACACCCTTCAATCCCAACTAAGTCTCGCCATTGGACCTT
EV545620       --> CGTCGCTGAACACACCCTTCAATCCCAACTAAGTCTCGCCATTGGACCTT

               401    -    451
UN09685        --> GAATGGGTTCTCTACTCGCCTTATACGCACCATTACCCCACGGCGAAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY449610       <-- GAATGGGTTCTCTACTCGCCTTATACGCACCATTACCCCACAGCGAAGCC  Raphanus sativus cv GSK3-1
FY449144       <-- GAATGGGTTCTCTACTCGCCTTATACGCACCATTACCCCACAGCGAAGCC  Raphanus sativus cv GSK3-1
FY432479       <-- GAATGGGTTCTCTACTCGCCTTATACGCACCATTACCCCACAGCGAAGCC  Raphanus sativus cv GSK3-1
FY446199       <-- GAATGGGTTCTCTACTCGCCTTATACGCACCATTACCCCACAGCGAAGCC  Raphanus sativus cv GSK3-1
FY449366       <-- GAATGGGTTCTCTACTCGCCTTATACGCACCATTACCCCACAGCGAAGCC  Raphanus sativus cv GSK3-1
EV548207       <-- .AATGGGT-CTCTACTCGC-TTATACGTACTATTACCCCACGGCGAAACC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550305       <-- .................................TACCCCACGGCGAAACC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX764698       <-- ................................................aC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550496       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY448551       <-- ..................................................  Raphanus sativus cv GSK3-1
FY450804       <-- ..................................................  Raphanus sativus cv GSK3-1
FY428813       <-- ..................................................  Raphanus sativus cv GSK3-1
FY438871       <-- ..................................................  Raphanus sativus cv GSK3-1
EV545785       --> GAATGGGTTCTCTACTCGCCTTATACGTACTATTACCCCACGGCGAAACC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768567       --> GAATGGGTTCTCTACTCGCCTTATACGTACTATTACCCCACGGCGAAACC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV545620       --> GAATGGGTTCTCTACTCGCCTTATACGTACTATTACCCCACGGCGAAACC  Raphanus raphanistrum subsp. raphanistrum (NY)

               451    -    501
UN09685        --> TATAACAGCTTCCCGAACACGTCTTATTCACAGCCGGTAACTGGATAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY449610       <-- TATAACAGCTTCACGAACACGTCTTATTCACAGCCGGTAACTGGATAAAA  Raphanus sativus cv GSK3-1
FY449144       <-- TATAACAGCTTCACGAACACGTCTTATTCACAGCCGGTAACTGGATAAAA  Raphanus sativus cv GSK3-1
FY432479       <-- TATAACAGCTTCACGAACACGTCTTATTCACAGCCGGTAACTGGATAAAA  Raphanus sativus cv GSK3-1
FY446199       <-- TATAACAGCTTCACGAACACGTCTTATTCACAGCCGGTAACTGGATAAAA  Raphanus sativus cv GSK3-1
FY449366       <-- TATAACAGCTTCACGAACACGTCTTATTCACAGCCGGTAACTGGATAAAA  Raphanus sativus cv GSK3-1
EV548207       <-- TATAACAGCTTCCCGAACACGTCTTATTCACAGCCGGTAACTGGATAAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550305       <-- TATAACAGCTTCCCGAACACGTCTTATTCACAGCCGGTAACTGGATAAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX764698       <-- TATAACAGC--TCCGAACACGTCTTAT-CACAGCCGGTAACTGGATAAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550496       <-- ...AACAGCTTCCCGAACACGTCTTATTCACAGCCGGTAACTGGATAAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY448551       <-- ...........................TCACAGCCGGTAACTGGATAAAA  Raphanus sativus cv GSK3-1
FY450804       <-- ..................................................  Raphanus sativus cv GSK3-1
FY428813       <-- ..................................................  Raphanus sativus cv GSK3-1
FY438871       <-- ..................................................  Raphanus sativus cv GSK3-1
EV545785       --> TATAACAGCTTCCCGAACACGTCTTATTCACAGCCGGTAACTGGATAAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768567       --> TATAACAGCTTCCCGAACACGTCTTATTCACAGCCGGTAACTGGATAAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV545620       --> TATAACAGCTTCCCGAACACGTCTTATTCACAGCCGGTAACTGGATAAAA  Raphanus raphanistrum subsp. raphanistrum (NY)

               501    -    551
UN09685        --> ACCACTCCAAGTCCAGAACTTATCACGATCAAATAGGCGGCAATCGAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY449610       <-- ACCACTCCAAATCCAGAACTTATCACGATCAAATAGGCGGCAATCGAACA  Raphanus sativus cv GSK3-1
FY449144       <-- ACCACTCCAAATCCAGAACTTATCACGATCAAATAGGCGGCAATCGAACA  Raphanus sativus cv GSK3-1
FY432479       <-- ACCACTCCAAATCCAGAACTTATCACGATCAAATAGGCGGCAATCGAACA  Raphanus sativus cv GSK3-1
FY446199       <-- ACCACTCCAAATCCAGAACTTATCACGATCAAATAGGCGGCAATCGAACA  Raphanus sativus cv GSK3-1
FY449366       <-- ACCACTCCAAATCCAGAACTTATCACGATCAAATAGGCGGCAATCGAACA  Raphanus sativus cv GSK3-1
EV548207       <-- ACCACTCCAAGTCCAGAACTTATCACGATCAAATAGGCGGCAATCGAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550305       <-- ACCACTCCAAGTCCAGAACTTATCACGATCAAATAGGCGGCAATCGAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX764698       <-- ACCACTCCAAGTCCAGAACTTATCACGATCAAATAGGCGGCAATCGAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550496       <-- ACCACTCCAAGTCCAGAACTTATCACGATCAAATAGGCGGCAATCGAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY448551       <-- ACCACTCCAAATCCAGAACTTATCACGATCAAATAGGCGGCAATCGAACA  Raphanus sativus cv GSK3-1
FY450804       <-- ..................................................  Raphanus sativus cv GSK3-1
FY428813       <-- ..................................................  Raphanus sativus cv GSK3-1
FY438871       <-- ..................................................  Raphanus sativus cv GSK3-1
EV545785       --> ACCACTCCAAGTCCAGAACTTATCACGATCAAATAGGCGGCAATCGAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768567       --> ACCACTCCAAGTCCAGAACTTATCACGATCAAATAGGCGGCAATCGAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV545620       --> ACCACTCCAAGTCCAGAACTTATCACGATCAAATAGGCGGCAATCGAACA  Raphanus raphanistrum subsp. raphanistrum (NY)

               551    -    601
UN09685        --> ATGAAGCAGACGCTTCCATAACCAAATAACTCCTTCTGATCCTCTCAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY449610       <-- ATGAAGCAGACGCTTCCATAACCAAATAACTCCTTCTGATCCTCTCAAAC
FY449144       <-- ATGAAGCAGACGCTTCCATAACCAAATAACTCCTTCTGATCCTCTCAAAC
FY432479       <-- ATGAAGCAGACGCTTCCATAACCAAATAACTCCTTCTGATCCTCTCAAAC
FY446199       <-- ATGAAGCAGACGCTTCCATAACCAAATAACTCCTTCTGATCCTCTCAAAC
FY449366       <-- ATGAAGCAGACGCTTCCATAACCAAATAACTCCTTCTGATCCTCTCAAAC
EV548207       <-- ATGAAGCAGACGCTTCCATAACCAAATAACTCCTTCTGATCCTCTCAAAC
EV550305       <-- ATGAAGCAGACGCTTCCATAACCAAATAACTCCTTCTGATCCTCTCAAAC
EX764698       <-- ATGAAGCAGACGCTTCCATAACCAAATAACTCCTTCTGATCCTCTCAAAC
EV550496       <-- ATGAAGCAGACGCTTCCATAACCAAATAACTCCTTCTGATCCTCTCAAAC
FY448551       <-- ATGAAGCAGACGCTTCCATAACCAAATAACTCCTTCTGATCCTCTCAAAC
FY450804       <-- ..................................................
FY428813       <-- ..................................................
FY438871       <-- ..................................................
EV545785       --> ATGAAGCAGACGCTTCCATAACCAAATAACTCCTTCTGATCCTCTCAAAC
EX768567       --> ATGAAGCAGACGCTTCCATAACCAAATAACTCCTTCTGATCCTCTCAAAC
EV545620       --> ATGA..............................................

               601    -    651
UN09685        --> CAAAGGTTGAGGTTGCAAAAGACTCTGACCATCAAGTATCAACATCCACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY449610       <-- CAAAGGTTGAGATTGCAAAAGACTCTGACCATCAAGTATCAACATCCACG  Raphanus sativus cv GSK3-1
FY449144       <-- CAAAGGTTGAGATTGCAAAAGACTCTGACCATCAAGTATCAACATCCACG  Raphanus sativus cv GSK3-1
FY432479       <-- CAAAGGTTGAGATTGCAAAAGACTCTGACCATCAAGTATCAACATCCACG  Raphanus sativus cv GSK3-1
FY446199       <-- CAAAGGTTGAGATTGCAAAAGACTCTGACCATCAAGTATCAACATCCACG  Raphanus sativus cv GSK3-1
FY449366       <-- CAAAGGTTGAGATTGCAAAAGACTCTGACCATCAAGTATCAACATCCACG  Raphanus sativus cv GSK3-1
EV548207       <-- CAAAGGTCGAGGTTGCAAAAGACTCTGACCATCAAGTATCAACATCCACG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550305       <-- CAAAGGTCGAGGTTGCAAAAGACTCTGACCATCAAGTATCAACATCCACG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX764698       <-- CAAAGGTCGAGGTTGCAAAAGACTCTGACCATCAAGTATCAACATCCACG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550496       <-- CAAAGGTCGAGGTTGCAAAAGACTCTGACCATCAAGTATCAACATCCACG  Raphanus raphanistrum subsp. raphanistrum (NY)
FY448551       <-- CAAAGGTTGAGATTGCAAAAGACTCTGACCATCAAGTATCAACATCCACG  Raphanus sativus cv GSK3-1
FY450804       <-- .........agaTTGCAAAAGACTCTGACCATCAAGTATCAACATCCACG  Raphanus sativus cv GSK3-1
FY428813       <-- ..............................ATCAAGTATCAACATCCACG  Raphanus sativus cv GSK3-1
FY438871       <-- ..................................................  Raphanus sativus cv GSK3-1
EV545785       --> CAAAGGTCGAGGTTGCAAAAGACTCTGACCATCAAGTATCAACATCCACG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768567       --> CAAAGGTCGAGGTTGCAAAAGACTCTGACCATCAAGTATCAACATCCACG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV545620       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               651    -    701
UN09685        --> GGAGTTAGACTCCAATGAACAGAGGCAACCCTCCCCC-TCCCGAGCAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY449610       <-- GGAGTTAGACTCCAATGAACAGAGGCAACCCTCCCCC-TCCCGAGCAAGA  Raphanus sativus cv GSK3-1
FY449144       <-- GGAGTTAGACTCCAATGAACAGAGGCAACCCTCCCCC-TCCCGAGCAAGA  Raphanus sativus cv GSK3-1
FY432479       <-- GGAGTTAGACTCCAATGAACAGAGGCAACCCTCCCCC-TCCCGAGCAAGA  Raphanus sativus cv GSK3-1
FY446199       <-- GGAGTTAGACTCCAATGAACAGAGGCAACCCTCCCCC-TCCCGAGCAAGA  Raphanus sativus cv GSK3-1
FY449366       <-- GGAGTTAGACTCCAATGAACAGAGGCAACCCTCCCCC-TCCCGAGCAAGA  Raphanus sativus cv GSK3-1
EV548207       <-- GGAGTT-GACTCCAATGAACAGAGGCAACCCTCCCCCCTCCCGAACAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550305       <-- GGAGTT-GACTCCAATGAACAGAGGCAACCCTCCCCC-TCCCGAGCAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX764698       <-- GGAGTT-GACTCCAATGAACAGAGGCAACCCTCCCCC-TCCCGAGCAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550496       <-- GGAGTT-GACTCCAATGAACAGAGGCAACCCTCCCCC-TCCCGAGCAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY448551       <-- GGAGTTAGACTCCAATGAACAGAGGCAACCCTCCCCC-TCCCGAGCAAGA  Raphanus sativus cv GSK3-1
FY450804       <-- GGAGTTAGACTCCAATGAACAGAGGCAACCCTCCCCC-TCCCGAGCAAGA  Raphanus sativus cv GSK3-1
FY428813       <-- GGAGTTAGACTCCAATGAACAGAGGCAACCCTCCCCC-TCCCGAGCAAGA  Raphanus sativus cv GSK3-1
FY438871       <-- ..................................................  Raphanus sativus cv GSK3-1
EV545785       --> GGAGTT-GACTCCAATGAACAGAGGCAACCCTCCCCC-TCCCGAGCAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768567       --> GGAGTT-GACTCCAATGAACAGAGGCAACCCTCCCCC-TCCCGAGCAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV545620       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               701    -    751
UN09685        --> CGCCAAGCCACATCCGCAGCTAAACCTCACGCACCCCTCTTCAATGGCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY449610       <-- CGCCAAGCCACATCCGCAGCTAAACCTCACGCACCCCTCTTCAATGGCCG  Raphanus sativus cv GSK3-1
FY449144       <-- CGCCAAGCCACATCCGCAGCTAAACCTCACGCACCCCTCTTCAATGGCCG  Raphanus sativus cv GSK3-1
FY432479       <-- CGCCAAGCCACATCCGCAGCTAAACCTCACGCACCCCTCTTCAATGGCCG  Raphanus sativus cv GSK3-1
FY446199       <-- CGCCAAGCCACATCCGCAGCTAAACCTCACGCACCCCTCTTCAATGGCCG  Raphanus sativus cv GSK3-1
FY449366       <-- CGCCAAGCCACATCCGCAGCTAAACCTCACGCACCCCTCTTCAATGGCCG  Raphanus sativus cv GSK3-1
EV548207       <-- CGCCAAGCCACATCCGTAGCTAAACCTCACGCACCCCTCTTCAATGGCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550305       <-- CGCCAAGCCACATCCGTAGCTAAACCTCACGCACCCCTCTTCAATGGCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX764698       <-- CGCCAAGCCACATCCGTAGCTAAACCTCACGCACCCCTCTTCAATGGCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550496       <-- CGCCAAGACACATCCGTAGCTAAACCTCACGCACCCCTCTTCAATGGCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FY448551       <-- CGCCAAGCCACATCCGCAGCTAAACCTCACGCACCCCTCTTCAATGGCCG  Raphanus sativus cv GSK3-1
FY450804       <-- CGCCAAGCCACATCCGCAGCTAAACCTCACGCACCCCTCTTCAATGGCCG  Raphanus sativus cv GSK3-1
FY428813       <-- CGCCAAGCCACATCCGCAGCTAAACCTCACGCACCCCTCTTCAATGGCCG  Raphanus sativus cv GSK3-1
FY438871       <-- ............................ACGCACCCCTCTTCAATGGCCG  Raphanus sativus cv GSK3-1
EV545785       --> CGCCAAGACACATCCGTAGCTAAACCTCACGCACCCCTCTTCAATGGCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768567       --> CGCCAAGCCACATCCGTAGCTAAACCTCACGCACCCCTCTTCAATGGCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV545620       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               751    -    801
UN09685        --> CTACTGCTTGTACCAGAGAAGAAACAGAGGGTAGAAACTGTTTCTAAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY449610       <-- CTACTGCTTGTACCAGAGAAGAAACAGAGGGTAGAAACTGTTTCTAAACC  Raphanus sativus cv GSK3-1
FY449144       <-- CTACTGCTTGTACCAGAGAAGAAACAGAGGGTAGAAACTGTTTCTAAACC  Raphanus sativus cv GSK3-1
FY432479       <-- CTACTGCTTGTACCAGAGAAGAAACAGAGGGTAGAAACTGTTTCTAAACC  Raphanus sativus cv GSK3-1
FY446199       <-- CTACTGCTTGTACCAGAGAAGAAACAGAGGGTAGAAACTGTTTCTAAACC  Raphanus sativus cv GSK3-1
FY449366       <-- CTACTGCTTGTACCAGAGAAGAAACAGAGGGTAGAAACTGTTTCTAAACC  Raphanus sativus cv GSK3-1
EV548207       <-- CTACTGCTTATACCAGAGAAAAAACAGAGGGTAGAAACTGTTTCTAAACC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550305       <-- CTACTGCTTATACCAGAGAAAAAACAGAGGGTAGAAACTGTTTCTAAACC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX764698       <-- CTACTGCTTATACCAGAGAAAAAACAGAGGGTAGAAACTGTTTCTAAACC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550496       <-- CTACTGCTTATACCAGAGAAAAAACAGAGGGTAGAAACTGTTTCTAAACC  Raphanus raphanistrum subsp. raphanistrum (NY)
FY448551       <-- CTACTGCTTGTACCAGAGAAGAAACAGAGGGTAGAAACTGTTTCTAAACC  Raphanus sativus cv GSK3-1
FY450804       <-- CTACTGCTTGTACCAGAGAAGAAACAGAGGGTAGAAACTGTTTCTAAACC  Raphanus sativus cv GSK3-1
FY428813       <-- CTACTGCTTGTACCAGAGAAGAAACAGAGGGTAGAAACTGTTTCTAAACC  Raphanus sativus cv GSK3-1
FY438871       <-- CTACTGCTTGTACCAGAGAAGAAACAGAGGGTAGAAACTGTTTCTAAACC  Raphanus sativus cv GSK3-1
EV545785       --> CTACTGCTTATACCAGAG................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768567       --> CTACTGCTTATACCAGAGAAAAAACAGAGGGTAGAAACTGTTTCTAAACC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV545620       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               801    -    851
UN09685        --> TTGCTCCCCAACATCGAAACAAACTAAGGAAATCAAACAAGAAAACGATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY449610       <-- TTGCTCCCCAACATCGAAACAAACTAAGGAAATCAAACAAGAAAACGATA  Raphanus sativus cv GSK3-1
FY449144       <-- TTGCTCCCCAACATCGAAACAAACTAAGGAAATCAAACAAGAAAACGATA  Raphanus sativus cv GSK3-1
FY432479       <-- TTGCTCCCCAACATCGAAACAAACTAAGGAAATCAAACAAGAAAACGATA  Raphanus sativus cv GSK3-1
FY446199       <-- TTGCTCCCCAACATCGAAACAAACTAAGGAAATCAAACAAGAAAACGATA  Raphanus sativus cv GSK3-1
FY449366       <-- TTGCTCCCCAACATCGAAACAAACTAAGGAAATCAAACAAGAAAACGATA  Raphanus sativus cv GSK3-1
EV548207       <-- TTGCTCCCCAACATCGAAACAAACTAAGGAAATCAAACGAGAAAACGATA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550305       <-- TTGCTCCCCAACATCGAAACAAACTAAGGAAATCAAACGAGAAAACGATA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX764698       <-- TTGCTCCCCAACATCGAAACAAACTAAGGAAATCAAACGAGAAAACGATA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550496       <-- TTGCTCCCCAACATCGAAACAAACTAAGGAAATCAGACGAGAAAACGATA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY448551       <-- TTGCTCCCCAACATCGAAACAAACTAAGGAAATCAAACAAGAAAACGATA  Raphanus sativus cv GSK3-1
FY450804       <-- TTGCTCCCCAACATCGAAACAAACTAAGGAAATCAAACAAGAAAACGATA  Raphanus sativus cv GSK3-1
FY428813       <-- TTGCTCCCCAACATCGAAACAAACTAAGGAAATCAAACAAGAAAACGATA  Raphanus sativus cv GSK3-1
FY438871       <-- TTGCTCCCCAACATCGAAACAAACTAAGGAAATCAAACAAGAAAACGATA  Raphanus sativus cv GSK3-1
EV545785       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768567       --> TTGCTCCCCAACATCGAAACAAACTAAGGAA-TCAAACGAGAAAACGATA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV545620       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               851    -    901
UN09685        --> TCCTCACAAAACTCTAAAATCCGACCACCACTACGAATCATCACCTCTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY449610       <-- TCCTCACAAAACTCTAAAATCCGACCACCACTACGAATCATCACCTCTAC
FY449144       <-- TCCTCACAAAACTCTAAAATCCGACCACCACTACGAATCATCACCTCTAC
FY432479       <-- TCCTCACAAAACTCTAAAATCCGACCACCACTACGAATCATCACCTCTAC
FY446199       <-- TCCTCACAAAACTCTAAAATCCGACCACCACTACGAATCATCACCTCTAC
FY449366       <-- TCCTCACAAAACTCTAAAATCCGACCACCACTACGAATCATCACCTCTAC
EV548207       <-- TCCTCACAAAACTCTAAAATCCGACCACCACTACGAATCATCACCTCTAC
EV550305       <-- TCCTCACAAAACTCTAAAATCCGACCACCACTACGAATCATCACCTCTAC
EX764698       <-- TCCTCACAAAACTCTAAAATCCGACCACCACTACGAATCATCACCTCTAC
EV550496       <-- TCCTCACAAAACTCTAAAATCCGACCACCACTACGAATCATCACCTCTAC
FY448551       <-- TCCTCACAAAACTCTAAAATCCGACCACCACTACGAATCATCACCTCTAC
FY450804       <-- TCCTCACAAAACTCTAAAATCCGACCACCACTACGAATCATCACCTCTAC
FY428813       <-- TCCTCACAAAACTCTAAAATCCGACCACCACTACGAATCATCACCTCTAC
FY438871       <-- TCCTCACAAAACTCTAAAATCCGACCACCACTACGAATCATCACCTCTAC
EV545785       --> ..................................................
EX768567       --> TCCTCACAAA-CTCTAAAtcc.............................
EV545620       --> ..................................................

               901    -    951
UN09685        --> AACCTCGCCACGATACCAGAAGAGGAGGAGACACCACCGGAGATTCTCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY449610       <-- AACCTCGCCACGATACCAGAAGAGGAGGAGACACCACCGGAGATTCTCAC  Raphanus sativus cv GSK3-1
FY449144       <-- AACCTCGCCACGATACCAGAAGAGGAGGAGACACCACCGGAGATTCTCAC  Raphanus sativus cv GSK3-1
FY432479       <-- AACCTCGCCACGATACCAGAAGAGGAGGAGACACCACCGGAGATTCTCAC  Raphanus sativus cv GSK3-1
FY446199       <-- AACCTCGCCACGATACCAGAAGAGGAGGAGACACCACCGGAGATTCTCAC  Raphanus sativus cv GSK3-1
FY449366       <-- AACCTCGCCACGATACCAGAAGAGGAGGAGACACCACCGGAGATTCTCAC  Raphanus sativus cv GSK3-1
EV548207       <-- AACCTCGCCACGATACCAGAAGAGGAGGAGACACCACCGGAGATCCTCAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550305       <-- AACCTCGCCACGATACCAGAAGAGGAGGAGACACCACCGGAGATCCTCAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX764698       <-- AACCTCGCCACGATACCAGAAGAGGAGGAGACACCACCGGAGATCCTCAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550496       <-- AACCTCGCCACGATACCAGAAGAGGAGGAGACACCACCGGAGATCCTCAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FY448551       <-- AACCTCGCCACGATACCAGAAGAGGAGGAGACACCACCGGAGATTCTCAC  Raphanus sativus cv GSK3-1
FY450804       <-- AACCTCGCCACGATACCAGAAGAGGAGGAGACACCACCGGAGATTCTCAC  Raphanus sativus cv GSK3-1
FY428813       <-- AACCTCGCCACGATACCAGAAGAGGAGGAGACACCACCGGAGATTCTCAC  Raphanus sativus cv GSK3-1
FY438871       <-- AACCTCGCCACGATACCAGAAGAGGAGGAGACACCACCGGAGATTCTCAC  Raphanus sativus cv GSK3-1
EV545785       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768567       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV545620       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               951    -   1001
UN09685        --> CGCGAGCGGAGCGGTCACCATAGCAAAACCCTAAATCCAGAGAACGCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY449610       <-- CGCGAGCGGAGCGGTCACCATAGCAAAACCCTAAATCCAGAGAACGCAAG
FY449144       <-- CGCGAGCGGAGCGGTCACCATAGCAAAACCCTAAATCCAGAGAACGCAAG
FY432479       <-- CGCGAGCGGAGCGGTCACCATAGCAAAACCCTAAATCCAGAGAACGCAAG
FY446199       <-- CGCGAGCGGAGCGGTCACCATAGCAAAACCCTAAATCCAGAGAACGCAAG
FY449366       <-- CGCGAGCGGAGCGGTCACCATAGCAAAACCCTAAATCCAGAGAACGCAAG
EV548207       <-- CGCGAGCGGAGCGGTCACCATAGCAAAACCCTAAATCCAGAGAACGCAAG
EV550305       <-- CGCGAGCGGAGCGGTCACCATAGCAAAACCCTAAATCCAGAGAACGCAAG
EX764698       <-- CGCGAGCGGAGCGGTCACCATAGCAAAACCCTAAATCCAGAGAACGCAAG
EV550496       <-- CGCGAGCGGAGCGGTCAACATAGCAAAACCCTAAATCCAGAGAACGCAAG
FY448551       <-- CGCGAGCGGAGCGGTCACCATAGCAAAACCCTAAATCCAGAGAACGCAAG
FY450804       <-- CGCGAGCGGAGCGGTCACCATAGCAAAACCCTAAATCCAGAGAACGCAAG
FY428813       <-- CGCGAGCGGAGCGGTCACCATAGCAAAACCCTAAATCCAGAGAACGCAAG
FY438871       <-- CGCGAGCGGAGCGGTCACCATAGCAAAACCCTAAATCCAGAGAACGCAAG
EV545785       --> ..................................................
EX768567       --> ..................................................
EV545620       --> ..................................................

               1001   -   1051
UN09685        --> CATATCGGAAGAGAAGGTGGGGATCGAGTAGCAGCAAAGAAAAGATGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY449610       <-- CATATCGGAAGAGAAGGTGGGGATCGAGTAGCAGCAAAGAAAAGATGGAG
FY449144       <-- CATATCGGAAGAGAAGGTGGGGATCGAGTAGCAGCAAAGAAAAGATGGAG
FY432479       <-- CATATCGGAAGAGAAGGTGGGGATCGAGTAGCAGCAAAGAAAAGATGGAG
FY446199       <-- CATATCGGAAGAGAAGGTGGGGATCGAGTAGCAGCAAAGAAAAGATGGAG
FY449366       <-- CATATCGGAAGAGAAGGTGGGGATCGAGTAGCAGCAAAGAAAAGATGGAG
EV548207       <-- CATATCGGAAGAGAAGGTGGGGATCGAGTAGCAGCAAAGAGAAGATGGAG
EV550305       <-- CATATCGGAAGAGAAGGTGGGGATCGAGTAGCAGCAAAGAAAAGATGGAG
EX764698       <-- CATATCGGAAGAGAAGGTGGGGATCGAGTAGCAGCAAAGAAAAGATGGAG
EV550496       <-- CATATCGGAAGAGAAGGTGGGGATCGAGTAGCAGCAAAGAAAAGATGGAG
FY448551       <-- CATATCGGAAGAGAAGGTGGGGATCGAGTAGCAGCAAAGAAAAGATGGAG
FY450804       <-- CATATCGGAAGAGAAGGTGGGGATCGAGTAGCAGCAAAGAAAAGATGGAG
FY428813       <-- CATATCGGAAGAGAAGGTGGGGATCGAGTAGCAGCAAAGAAAAGATGGAG
FY438871       <-- CATATCGGAAGAGAAGGTGGGGATCGAGTAGCAGCAAAGAAAAGATGGAG
EV545785       --> ..................................................
EX768567       --> ..................................................
EV545620       --> ..................................................

               1051   -   1101
UN09685        --> ATATGCTAAAGTCGGACGCCTCCGACGTCTTCACGCGCTCGCACGCGCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY449610       <-- ATATGCTAAAGTCGGACGCCTCCGACGTCTTCACGCGCTCGCACGCGCTA  Raphanus sativus cv GSK3-1
FY449144       <-- ATATGCTAAAGTCGGACGCCTCCGACGTCTTCACGCGCTCGCACGCGCTA  Raphanus sativus cv GSK3-1
FY432479       <-- ATATGCTAAAGTCGGACGCCTCCGACGTCTTCACGCGCTCGCACGCGCTA  Raphanus sativus cv GSK3-1
FY446199       <-- ATATGCTAAAGTCGGACGCCTCCGACGTCTTCACGCGCTCGCACGCGCTA  Raphanus sativus cv GSK3-1
FY449366       <-- ATATGCTAAAGTCGGACGCCTCCGACGTCTTCACGCGCTCGCACGCGCTA  Raphanus sativus cv GSK3-1
EV548207       <-- ATATGCTAAAGTCGGACGCCTCCGACGTCTTCACGCGCTCGCACGCGTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550305       <-- ATATGCTAAAGTCGGACGCCTCCGACGTCTTCACGCGCTCGCACGCGTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX764698       <-- ATATGCTAAAGTCGGACGCCTCCGACGTCTTCACGCGCTCGCACGCGTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550496       <-- ATATGCTAAAGTCGGACGCCTCCGACGTCTTCACGCGCTCGCACGCGTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY448551       <-- ATATGCTAAAGTCGGACGCCTCCGACGTCTTCACGCGCTCGCACGCGCTA  Raphanus sativus cv GSK3-1
FY450804       <-- ATATGCTAAAGTCGGACGCCTCCGACGTCTTCACGCGCTCGCACGCGCTA  Raphanus sativus cv GSK3-1
FY428813       <-- ATATGCTAAAGTCGGACGCCTCCGACGTCTTCACGCGCTCGCACGCGCTA  Raphanus sativus cv GSK3-1
FY438871       <-- ATATGCTAAAGTCGGACGCCTCCGACGTCTTCACGCGCTCGCACGCGCTA  Raphanus sativus cv GSK3-1
EV545785       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768567       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV545620       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               1101   -   1151
UN09685        --> CCAACGTCGGAGCTACAGCAGGAGGCGTTCTGGTCTTCGAAGGAGAAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY449610       <-- CCAACGTCGGAGCTACAGCAGGAGGCGTTCTG..................
FY449144       <-- CCAACGTCGGAGCTACAGCAGGAGG.........................
FY432479       <-- CCAACGTCGGAGCTACAGCAGGAGG.........................
FY446199       <-- CCAACGTCGGA.......................................
FY449366       <-- CCAACGTCGGAGCTACAGCAGGAGGCGTTCTGGTCT-CGAAGGAGAAAAG
EV548207       <-- CCAACGTCGGAGCTACAGCAGGAGGCGTTCTGGTCTTCG...........
EV550305       <-- CCAACGTCGGAGCTACAGCAGGAGGCGTTCTGGTCTTCGAAGGAGAAAAG
EX764698       <-- CCAACGTCGGAGCTACAGCAGGAGGCGTTCTGGTCTTCAAAGGAGAAAAG
EV550496       <-- CCAACGTCGGAG......................................
FY448551       <-- CCAACGTCGGAGCTACAGCAGGAGGCGTTCTGGTCTTCGAAGGAGAAAAG
FY450804       <-- CCAACGTCGGAGCTACAGCAGGAGGCGTTCTG-TCTTCGAAGGAGAAAAG
FY428813       <-- CCAACGTCGGAGCTACAGCAGGAG..........................
FY438871       <-- CCAACGTCGGAGCTACAGCAGGAGGCGTT.....................
EV545785       --> ..................................................
EX768567       --> ..................................................
EV545620       --> ..................................................

               1151   -   1201
UN09685        --> T-GGAAGAGAGAGAAAGGATATTCTTGCCCGCATCAACTCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY449610       <-- ..........................................
FY449144       <-- ..........................................
FY432479       <-- ..........................................
FY446199       <-- ..........................................
FY449366       <-- T-GGAAGAGAGAGAAAG.........................
EV548207       <-- ..........................................
EV550305       <-- TTGGAGGAGAGAGAAAGGATATTCTTGCCCcc..........
EX764698       <-- TTGGAGGAGAGAGAAAGGATATTCTTGCCCGCATCAACTCCC
EV550496       <-- ..........................................
FY448551       <-- T-GGAAGAGAGAGAAAGaccctc...................
FY450804       <-- T-GGAAGAGAGAGAAAG.........................
FY428813       <-- ..........................................
FY438871       <-- ..........................................
EV545785       --> ..........................................
EX768567       --> ..........................................
EV545620       --> ..........................................