0      -     50
UN09687        --> .GGCCCAGCCAAAAATTCTCAGCC-ATTGAGAGTTTAACATTTCATCC-A
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758404       <-- .GGCCCAGCCAAAAATTCACAGCC-ATTGAGAGTTTAACATTTCATCC-A  Raphanus raphanistrum subsp. raphanistrum (MS)
EX768226       <-- .GGCCCAGCCAAAAATTCACAGCC-ATTGAGAGTTTAACATTTCATCC-A  Raphanus raphanistrum subsp. raphanistrum (NY)
EX900561       <-- .GGCCCAGCCAAAAATTCTCAGCC-ATTGAGAGTTTAGCATTTCATCC-A  Raphanus sativus cv Early Scarlet Globe
EY902934       <-- .GGCCCAGCCAAAAATTCACAGCC-ATTGAGAGTTTAACATTTCATCC-A  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530124       <-- .GGCCCAGCCAAAAATTCTCAGCC-ATTGAGAGTTTAACATTTCATCC-A  Raphanus raphanistrum subsp. maritimus
FD537997       <-- .GGCCCAGCCAAAAATTCACAGCC-ATTGAGAGTTTAACATTTCATCC-A  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969268       <-- .GGCCCAGCCAAAAATTCACAGCCCATTGAGAGTTTAACATTTCATCCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976465       <-- .GGCCCAGCCAAAAATTCACAGCC-ATTGAGAGTTTAACATTTCATCC-A  Raphanus raphanistrum subsp. raphanistrum (NY)
EW738542       <-- ..ggCCAGCCAAAAATTCTCAGCC-ATTGAGAGTTTAACATTTCATCC-A  Raphanus sativus cv Rat-Tail Radish #3870
EY945003       <-- ..ggCCAGCCAAAAATTCTCAGCC-ATTGAGAGTTTAACATTTCATCC-A  Raphanus sativus cv Rat-Tail Radish #3870
FD961017       <-- agggCCAACCAAAAATTCTCAGCC-ATTGAGAGTTTAACATTCCATCC-A  Raphanus raphanistrum subsp. maritimus
EX891232       <-- ...ggCAGCCAAAAATTCTCAGCC-ATTGAGAGTTTAACATTTCATCC-A  Raphanus sativus var. oleiformis
FD951327       <-- ...ggCAGCCAAAAATTCTCAGCC-ATTGAGAGTTTAACATTTCATCC-A  Raphanus sativus cv Rat-Tail Radish #3870
EX766376       <-- ...gggAGCCAAAAATTCTCAGCC-ATTGAGAGTTTAACATTTCATCC-A  Raphanus raphanistrum subsp. raphanistrum (NY)
EY919467       <-- ....ggAGCCAAAAATTCTCAGCC-ATTGAGAGTTTAACATTTTATCC-A  Raphanus raphanistrum subsp. landra
FD529985       <-- ...........AAAATTCTCAGCC-ATTGAGAGTTTAACATTTCATCC-A  Raphanus raphanistrum subsp. maritimus
FD977770       <-- ..................ggAGCC-ATTGAGAGTTTAACATTTCATCC-A  Raphanus raphanistrum subsp. raphanistrum (NY)
EV531930       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX761392       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV536698       --> .GGCCCAGCCAAAAATTCACAGCC-ATTGAGAGTTTAACATTTCATCC-A  Raphanus raphanistrum subsp. raphanistrum (MS)
EX753978       --> .GGCCCAGCCAAAAATTCACAGCC-ATTGAGAGTTTAACATTTCATCC-A  Raphanus raphanistrum subsp. raphanistrum (MS)
EX764274       --> .GGCCCAGCCAAAAATTCACAGCC-ATTGAGAGTTTAACATTTCATCC-A  Raphanus raphanistrum subsp. raphanistrum (NY)
EX896670       --> .GGCCCAGCCAAAAATTCTCAGCC-ATTGAGAGTTTAGCATTTCATCC-A  Raphanus sativus cv Early Scarlet Globe
EY897883       --> .GGCCCAGCCAAAAATTCTCAGCC-ATTGAGAGTTTAACATTTCATCC-A  Raphanus raphanistrum subsp. maritimus
EY906865       --> .GGCCCAGCCAAAAATTCACAGCC-ATTGAGAGTTTAACATTTCATCC-A  Raphanus raphanistrum subsp. raphanistrum (MS)
EY925415       --> .GGCCCAGCCAAAAATTCTCAGCC-ATTGAGAGTTTAACATTTTATCC-A  Raphanus raphanistrum subsp. landra
FD533936       --> .GGCCCAGCCAAAAATTCTCAGCC-ATTGAGAGTTTAACATTTCATCC-A  Raphanus raphanistrum subsp. maritimus
FD534107       --> .GGCCCAGCCAAAAATTCTCAGCC-ATTGAGAGTTTAACATTTCATCC-A  Raphanus raphanistrum subsp. maritimus
FD548917       --> .GGCCCAGCCAAAAATTCACAGCC-ATTGAGAGTTTAACATTTCATCC-A  Raphanus raphanistrum subsp. raphanistrum (NY)
FD970281       --> .GGCCCAGCCAAAAATTCACAGCC-ATTGAGAGTTTAACATTTCATCC-A  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973614       --> .GGCCCAGCCAAAAATTCACAGCC-ATTGAGAGTTTAACATTTCATCC-A  Raphanus raphanistrum subsp. raphanistrum (MS)
FD980600       --> .GGCCCAGCCAAAAATTCACAGCC-ATTGAGAGTTTAACATTTCATCC-A  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734922       --> ..ggCCAGCCAAAAATTCTCAGCC-ATTGAGAGTTTAACATTTCATCC-A  Raphanus sativus cv Rat-Tail Radish #3870
EY949495       --> ..ggCCAGCCAAAAATTCTCAGCC-ATTGAGAGTTTAACATTTCATCC-A  Raphanus sativus cv Rat-Tail Radish #3870
FD965212       --> agggCCAACCAAAAATTCTCAGCC-ATTGAGAGTTTAACATTCCATCC-A  Raphanus raphanistrum subsp. maritimus
EX746995       --> ...ggCAGCCAAAAATTCTCAGCC-ATTGGGAGTTTAACATTTCATCC-A  Raphanus raphanistrum subsp. maritimus
EX886964       --> ...ggCAGCCAAAAATTCTCAGCC-ATTGAGAGTTTAACATTTCATCC-A  Raphanus sativus var. oleiformis
FD541783       --> .....CAGCCAAAAATTCACAGCC-ATTGAGAGTTTAACATTTCATCC-A  Raphanus raphanistrum subsp. raphanistrum (MS)
FD955245       --> ...ggCAGCCAAAAATTCTCAGCC-ATTGAGAGTTTAACATTTCATCC-A  Raphanus sativus cv Rat-Tail Radish #3870
EX762007       --> ...gggAGCCAAAAATTCTCAGCC-ATTGAGAGTTTAACATTTCATCC-A  Raphanus raphanistrum subsp. raphanistrum (NY)
EY923705       --> ....ggAGCCAAAAATTCTCAGCC-ATTGAGAGTTTAACATTTTATCC-A  Raphanus raphanistrum subsp. landra
FD941476       --> ..................................................  Raphanus sativus var. oleiformis
FD982149       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX757931       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               50     -    100
UN09687        --> AAAAATGTTTTTT-CAGATTATTCAGGAGGTTTTCACAGGCGTTGCGGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758404       <-- AAAAATGTTTTTT-CAGATTATTCAGGAGGTTTTCACAGGCGTTGCGGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX768226       <-- AAAAATGTTTTTT-CAGATTATTCAGGAGGTTTTCACAGGCGTTGCGGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX900561       <-- AAAAATGTTTTTT-CAGATTATTCAGGGGGTTTTCACAGGCGTTGCGGCA  Raphanus sativus cv Early Scarlet Globe
EY902934       <-- AAAAATGTTTTTT-CAGATTATTCAGGAGGTTTTCACAGGCGTTGCGGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530124       <-- AAAAATGTTTTTT-CAGATTATTCAGGAGGTTTTCACAGGCGTTGCGGCA  Raphanus raphanistrum subsp. maritimus
FD537997       <-- AAAAATGTTTTTT-CAGATTATTCAGGAGGTTTTCACAGGCGTTGCGGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969268       <-- AAAAATGTTTTTTTCAGATTATTCAGGAGGTTTTCACAGGCGTTGCGGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976465       <-- AAAAATGTTTTTT-CAGATTATTCAGGAGGTTTTCACAGGCGTTGCGGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW738542       <-- AAAAATGTTTTTT-CAGATTATTCAGGAGGTTTTCACAGGCGTTGCGGCA  Raphanus sativus cv Rat-Tail Radish #3870
EY945003       <-- AAAAATGTTTTTT-CAGATTATTCAGGGGGTTTTCACAGGCGTTGCGGCA  Raphanus sativus cv Rat-Tail Radish #3870
FD961017       <-- AAAAATGTTTTTT-CAGATTATTCAGGAGGTTTTCACAGGCGTTGCGGCA  Raphanus raphanistrum subsp. maritimus
EX891232       <-- AAAAATGTTTTTT-CAGATTATTCAGGGGGTTTTCACAGGCGTTGCGGCA  Raphanus sativus var. oleiformis
FD951327       <-- AAAAATGTTTTTT-CAGATTATTCAGGGGGTTTTCACAGGCGTTGCGGCA  Raphanus sativus cv Rat-Tail Radish #3870
EX766376       <-- AAAAATGTTTTTT-CAGATTATTCAGGAGGTTTTCACAGGCGTTGCGGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY919467       <-- AAAAATGTTTTTT-CAGATTATTCAGGGGGTTTTCACAGGCGTTGCGGCA  Raphanus raphanistrum subsp. landra
FD529985       <-- AAAAATGTTTTTT-CAGATTATTCAGGAGGTTTTCACAGGCGTTGCGGCA  Raphanus raphanistrum subsp. maritimus
FD977770       <-- AAAAATGTTTTTT-CAGATTATTCAGGAGGTTTTCACAGGCGTTGCGGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV531930       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX761392       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV536698       --> AAAAATGTTTTTT-CAGATTATTCAGGAGGTTTTCACAGGCGTTGCGGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX753978       --> AAAAATGTTTTTT-CAGATTATTCAGGAGGTTTTCACAGGCGTTGCGGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX764274       --> AAAAATGTTTTTT-CAGATTATTCAGGAGGTTTTCACAGGCGTTGCGGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX896670       --> AAAAATGTTTTTT-CAGATTATTCAGGGGGTTTTCACAGGCGTTGCGGCA  Raphanus sativus cv Early Scarlet Globe
EY897883       --> AAAAATGTTTTTT-CAGATTATTCAGGAGGTTTTCACAGGCGTTGCGGCA  Raphanus raphanistrum subsp. maritimus
EY906865       --> AAAAATGTTTTTT-CAGATTATTCAGGAGGTTTTCACAGGCGTTGCGGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY925415       --> AAAAATGTTTTTT-CAGATTATTCAGGGGGTTTTCACAGGCGTTGCGGCA  Raphanus raphanistrum subsp. landra
FD533936       --> AAAAATGTTTTTT-CAGATTATTCAGGAGGTTTTCACAGGCGTTGCGGCA  Raphanus raphanistrum subsp. maritimus
FD534107       --> AAAAATGTTTTTT-CAGATTATTCAGGAGGTTTTCACAGGCGTTGCGGCA  Raphanus raphanistrum subsp. maritimus
FD548917       --> AAAAATGTTTTTT-CAGATTATTCAGGAGGTTTTCACAGGCGTTGCGGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD970281       --> AAAAATGTTTTTT-CAGATTATTCAGGAGGTTTTCACAGGCGTTGCGGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973614       --> AAAAATGTTTTTT-CAGATTATTCAGGAGGTTTTCACAGGCGTTGCGGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD980600       --> AAAAATGTTTTTT-CAGATTATTCAGGAGGTTTTCACAGGCGTTGCGGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734922       --> AAAAATGTTTTTT-CAGATTATTCAGGAGGTTTTCACAGGCGTTGCGGCA  Raphanus sativus cv Rat-Tail Radish #3870
EY949495       --> AAAAATGTTTTTT-CAGATTATTCAGGGGGTTTTCACAGGCGTTGCGGCA  Raphanus sativus cv Rat-Tail Radish #3870
FD965212       --> AAAAATGTTTTTT-CAGATTATTCAGGAGGTTTTCACAGGCGTTGCGGCA  Raphanus raphanistrum subsp. maritimus
EX746995       --> AAAAATGTTTTTT-CAGATTATTCAGGAGGTTTTCACAGGCGTTGCGGCA  Raphanus raphanistrum subsp. maritimus
EX886964       --> AAAAATGTTTTTT-CAGATTATTCAGGGGGTTTTCACAGGCGTTGCGGCA  Raphanus sativus var. oleiformis
FD541783       --> AAAAATGTTTTTT-CAGATTATTCAGGAGGTTTTCACAGGCGTTGCGGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD955245       --> AAAAATGTTTTTT-CAGATTATTCAGGGGGTTTTCACAGGCGTTGCGGCA  Raphanus sativus cv Rat-Tail Radish #3870
EX762007       --> AAAAATGTTTTTT-CAGATTATTCAGGAGGTTTTCACAGGCGTTGCGGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY923705       --> AAAAATGTTTTTT-CAGATTATTCAGGGGGTTTTCACAGGCGTTGCGGCA  Raphanus raphanistrum subsp. landra
FD941476       --> ........................gGGAGGTTTTCACAGGCGTTGCGGCA  Raphanus sativus var. oleiformis
FD982149       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX757931       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               100    -    150
UN09687        --> TTAGCTCTATTGGCATTCGCTGGTATAACCCTTGGTAGCTCAGCCGTGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758404       <-- T-AGCTCTATTGGCATTCGCTGGTATAACCCTTGGTAGCTCAGCCGTGGC
EX768226       <-- TTAGCTCTATTGGCATTCGCTGGTATAACCCTTGGTAGCTCAGCCGTGGC
EX900561       <-- TTAGCTCTATTGGCATTCGCTGGTATAACCCTTGGTAGCTCAGCCGTGGC
EY902934       <-- TTAGCTCTATTGGCATTCGCTGGTATAACCCTTGGTAGCTCAGCCGTGGC
FD530124       <-- TTAGCTCTATTGGCATTCGCTGGTATAACCCTTGGTAGCTCAGCCGTGGC
FD537997       <-- TTAGCTCTATTGGCATTCGCTGGTATAACCCTTGGTAGCTCAGCCGTGGC
FD969268       <-- TTAGCTCTATTGGCATTCGCTGGTATAACCCTTGGTAGCTCAGCCGTGGC
FD976465       <-- TTAGCTCTATTGGCATTCGCTGGTATAACCCTTGGTAGCTCAGCCGTGGC
EW738542       <-- TTAGCTCTATTGGCATTCGCTGGTATAACCCTTGGTAGCTCAGCCGTGGC
EY945003       <-- TTAGCTCTATTGGCATTCGCTGGTATAACCCTTGGTAGCTCAGCCGTGGC
FD961017       <-- TTAGCTCTATTGGCATTCGCTGGTATAACCCTTGGTAGCTCAGTCGTGGC
EX891232       <-- TTAGCTCTATTGGCATTCGCTGGTATAACCCTTGGTAGTTCAGCCGTGGC
FD951327       <-- TTAGCTCTATTGGCATTCGCTGGTATAACCCTTGGTAGCTCAGCCGTGGC
EX766376       <-- TTAGCTCTATTGGCATTCGCTGGTATAACCCTTGGTAGCTCAGCCGTGGC
EY919467       <-- TTAGCTCTATTGGCATTCGCTGGTATAACCCTTGGTAACTCAGCCGTGGC
FD529985       <-- TTAGCTCTATTGGCATTCGCTGGTATAACCCTTGGTAGCTCAGCCGTGGC
FD977770       <-- TTAGCTCTATTGGCATTCGCTGGTATAACCCTTGGTAGCTCAGCCGTGGC
EV531930       <-- ..................................................
EX761392       <-- ..................................................
EV536698       --> TTAGCTCTATTGGCATTCGCTGGTATAACCCTTGGTAGCTCAGCCGTGGC
EX753978       --> T-AGCTCTATTGGCATTCGCTGGTATAACCCTTGGTAGCTCAGCCGTGGC
EX764274       --> TTAGCTCTATTGGCATTCGCTGGTATAACCCTTGGTAGCTCAGCCGTGGC
EX896670       --> TTAGCTCTATTGGCATTCGCTGGTATAACCCTTGGTAGCTCAGCCGTGGC
EY897883       --> TTAGCTCTATTGGCATTCGCTGGTATAACCCTTGGTAGCTCAGCCGTGGC
EY906865       --> TTAGCTCTATTGGCATTCGCTGGTATAACCCTTGGTAGCTCAGCCGTGGC
EY925415       --> TTAGCTCTATTGGCATTCGCTGGTATAACCCTTGGTAGCTCAGCCGTGGC
FD533936       --> TTAGCTCTATTGGCATTCGCTGGTATAACCCTTGGTAGCTCAGCCGTGGC
FD534107       --> TTAGCTCTATTGGCATTCGCTGGTATAACCCTTGGTAGCTCAGCCGTGGC
FD548917       --> TTAGCTCTATTGGCATTCGCTGGTATAACCCTTGGTAGCTCAGCCGTGGC
FD970281       --> TTAGCTCTATTGGCATTCGCTGGTATAACCCTTGGTAGCTCAGCCGTGGC
FD973614       --> TTAGCTCTATTGGCATTCGCTGGTATAACCCTTGGTAGCTCAGCCGTGGC
FD980600       --> TTAGCTCTATTGGCATTCGCTGGTATAACCCTTGGTAGCTCAGCCGTGGC
EW734922       --> TTAGCTCTATTGGCATTCGCTGGTATAACCCTTGGTAGCTCAGCCGTGGC
EY949495       --> TTAGCTCTATTGGCATTCGCTGGTATAACCCTTGGTAGCTCAGCCGTGGC
FD965212       --> TTAGCTCTATTGGCATTCGCTGGTATAACCCTTGGTAGCTCAGTCGTGGC
EX746995       --> TTAGCTCTATTGGCATTCGCTGGTATAACCCTTGGTAGCTCAGCCGTGGC
EX886964       --> TTAGCTCTATTGGCATTCGCTGGTATAACCCTTGGTAGCTCAGCCGTGGC
FD541783       --> TTAGCTCTATTGGCATTCGCTGGTATAACCCTTGGTAGCTCAGCCGTGGC
FD955245       --> TTAGCTCTATTGGCATTCGCTGGTATAACCCTTGGTAGCTCAGCCGTGGC
EX762007       --> TTAGCTCTATTGGCATTCGCTGGTATAACCCTTGGTAGCTCAGCCGTGGC
EY923705       --> TTAGCTCTATTGGCATTCGCTGGTATAACCCTTGGTAACTCAGCCGTGGC
FD941476       --> TTAGCTCTATTGGCATTCGCTGGTATAACCCTTGGTAGCTCAGCCGTGGC
FD982149       --> ..................................................
EX757931       --> ..................................................

               150    -    200
UN09687        --> ATTAGCCGTAAGCACGCCGTTTTTT-GTCCTATTCAGTCCGATTCTCGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758404       <-- ATTAGCCGTAAGCACGCCGTTTTTT-GTCCTATTCAGTCCGATTCTCGTG
EX768226       <-- ATTAGCCGTAAGCACGCCGTTTTTT-GTCCTATTCAGTCCGATTCTCGTG
EX900561       <-- ATTAGCCGTAAGCACGCCGTCTTTT-GTCCTATTCAGTCCGATTCTCGTG
EY902934       <-- ATTAGCCGTAAGCACGCCGTTTTTTTGTCCTATTCAGTCCGATTCTCGTG
FD530124       <-- ATTAGCCGTAAGCACGCCGTTTTTT-GTCCTATTCAGTCCGATTCTCGTG
FD537997       <-- ATTAGCCGTAAGCACGCCGTTTTTT-GTCCTATTCAGTCCGATTCTCGTG
FD969268       <-- ATTAGCCGTAAGCACGCCGTTTTTT-GTCCTATTCAGTCCGATTCTCGTG
FD976465       <-- ATTAGCCGTAAGCACGCCGTTTTTT-GTCCTATTCAGTCCGATTCTCGTG
EW738542       <-- ATTAGCCGTAAGCACGCCGTTTTTT-GTCCTATTCAGTCCGATTCTCGTG
EY945003       <-- ATTAGCCGTAAGCACGCCGTTTTTT-GTCCTATTCAGTCCGATTCTCGTG
FD961017       <-- ATTAGCCGTAAGCACGCCGTTTTTT-GTCCTATTCAGTCCGATTCTCGTG
EX891232       <-- ATTAGCCGTAAGCACGCCGTTTTTT-GTCCTATTCAGTCCGATTCTCGTG
FD951327       <-- ATTAGCCGTAAGCACGCCGTTTTTT-GTCCTATTCAGTCCGATTCTCGTG
EX766376       <-- ATTAGCCGTAAGCACGCCGTTTTTT-GTCCTATTCAGTCCGATTCTCGTG
EY919467       <-- ATTAGCCGTAAGCACGCCGTTTTTT-GTCCTATTCAGTCCGATTCTCGTG
FD529985       <-- ATTAGCCGTAAGCACGCCGTTTTTT-GTCCTATTCAGTCCGATTCTCGTG
FD977770       <-- ATTAGCCGTAAGCACGCCGTTTTTT-GTCCTATTCAGTCCGATTCTCGTG
EV531930       <-- ..................................gAGTCCGATTCTCGTG
EX761392       <-- ..................................................
EV536698       --> ATTAGCCGTAAGCACGCCGTTTTTT-GTCCTATTCAGTCCGATTCTCGTG
EX753978       --> ATTAGCCGTAAGCACGCCGTTTTTT-GTCCTATTCAGTCCGATTCTCGTG
EX764274       --> ATTAGCCGTAAGCACGCCGTTTTTT-GTCCTATTCAGTCCGATTCTCGTG
EX896670       --> ATTAGCCGTAAGCACGCCGTCTTTT-GTCCTATTCAGTCCGATTCTCGTG
EY897883       --> ATTAGCCGTAAGCACGCCGTTTTTT-GTCCTATTCAGTCCGATTCTCGTG
EY906865       --> ATTAGCCGTAAGCACGCCGTTTTTTTGTCCTATTCAGTCCGATTCTCGTG
EY925415       --> ATTAGCCGTAAGCACGCCGTTTT---GTCCTATTCAGTCCGATTCTCGTG
FD533936       --> ATTAGCCGTAAGCACGCCGTTTTTT-GTCCTATTCAGTCCGATTCTCGTG
FD534107       --> ATTAGCCGTAAGCACGCCGTTTTTT-GTCCTATTCAGTCCGATTCTCGTG
FD548917       --> ATTAGCCGTAAGCACGCCGTTTTTT-GTCCTATTCAGTCCGATTCTCGTG
FD970281       --> ATTAGCCGTAAGCACGCCGTTTTTT-GTCCTATTCAGTCCGATTCTCGTG
FD973614       --> ATTAGCCGTAAGCACGCCGTTTTTT-GTCCTATTCAGTCCGATTCTCGTG
FD980600       --> ATTAGCCGTAAGCACGCCGTTTTTT-GTCCTATTCAGTCCGATTCTCGTG
EW734922       --> ATTAGCCGTAAGCACGCCGTTTTTT-GTCCTATTCAGTCCGATTCTCGTG
EY949495       --> ATTAGCCGTAAGCACGCCGTTTTTT-GTCCTATTCAGTCCGATTCTCGTG
FD965212       --> ATTAGCCGTAAGCACGCCGTTTTTT-GTCCTATTCAGTCCGATTCTCGTG
EX746995       --> ATTAGCCGTAAGCATGCCGTTTTTT-GTCCTATTCAGTCCGATTCTCGTG
EX886964       --> ATTAGCCGTAAGCACGCCGTTTTTT-GTCCTATTCAGTCCGATTCTCGTG
FD541783       --> ATTAGCCGTAAGCACGCCGTTTTTT-GTCCTATTCAGTCCGATTCTCGTG
FD955245       --> ATTAGCCGTAAGCACGCCGTTTTTT-GTCCTATTCAGTCCGATTCTCGTG
EX762007       --> ATTAGCCGTAAGCACGCCGTTTTTT-GTCCTATTCAGTCCGATTCTCGTG
EY923705       --> ATTAGCCGTAAGCACGCCGTTTTTT-GTCCTATTCAGTCCGATTCTCGTG
FD941476       --> ATTAGCCGTAAGC--GCCGCTTTTT-GTCCTATTCAGTCCGATTCTCGTG
FD982149       --> ..................................................
EX757931       --> ..................................................

               200    -    250
UN09687        --> CCAGCAACTATAGCCACCACTTTGTTAACTACGGGCTTGTCGGCCACCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758404       <-- CCAGCAACTATAGCCACCACTTTGTTAACAACGGGCTTGTCGGCCACCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX768226       <-- CCAGCAACTATAGCCACCACTTTGTTAACTACGGGCTTGTCGGCCACCGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX900561       <-- CCAGCAACTATAGCCACCACTTTGTTAACTACGGGCTTGTCGGCCACCGG  Raphanus sativus cv Early Scarlet Globe
EY902934       <-- CCAGCAACTATAGCCACCACTTTGTTAACAACGGGCTTGTCGGCCACCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530124       <-- CCAGCAACTATAGCCACCACTTTGTTAACTACGGGCTTGTCGGCCACCGG  Raphanus raphanistrum subsp. maritimus
FD537997       <-- CCAGCAACTATAGCCACCACTTTGTTAACAACGGGCTTGTCGGCCACCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969268       <-- CCAGCAACTATAGCCACCACTTTGTTAACAACGGGCTTGTCGGCCACCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976465       <-- CCAGCAACTATAGCCACCACTTTGTTAACTACGGGCTTGTCGGCCACCGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW738542       <-- CCAGCAACTATAGCCACCACTTTGTTAACTACGGGCTTGTCGGCCACCGG  Raphanus sativus cv Rat-Tail Radish #3870
EY945003       <-- CCAGCAACTATAGCCACCACTTTGTTAACTACGGGCTTGTCGGCCACCGG  Raphanus sativus cv Rat-Tail Radish #3870
FD961017       <-- CCAGCAACTATAGCCACCACTTTGTTAACTACGGGCTTGTCGGCCACCGG  Raphanus raphanistrum subsp. maritimus
EX891232       <-- CCAGCAACTATAGCCACCACTTTGTTAACTACGGGCTTGTCGGCCACCGG  Raphanus sativus var. oleiformis
FD951327       <-- CCAGCAACTATAGCCACCACTTTGTTAACTACGGGCTTGTCGGCCACCGG  Raphanus sativus cv Rat-Tail Radish #3870
EX766376       <-- CCAGCAACTATAGCCACCACTTTGTTAACTACGGGCTTGTCGGCCACCGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY919467       <-- CCAGCAACTATAGCCACCACTTTGTTAACTACGGGCTTGTCGGCCACCGG  Raphanus raphanistrum subsp. landra
FD529985       <-- CCAGCAACTATGGCCACCACTTTGTTAACTACGGGCTTGTCGGCCACCGG  Raphanus raphanistrum subsp. maritimus
FD977770       <-- CCAGCAACTATAGCCACCACTTTGTTAACTACGGGCTTGTCGGCCACCGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV531930       <-- CCAGCAACTATAGCCACCACTTTGTTAACTACGGGCTTGTCGGCCACCGG  Raphanus raphanistrum subsp. maritimus
EX761392       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV536698       --> CCAGCAACTATAGCCACCACTTTGTTAACAACGGGCTTGTCGGCCACCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX753978       --> CCAGCAACTATAGCCACCACTTTGTTAACAACGGGCTTGTCGGCCACCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX764274       --> CCAGCAACTATAGCCACCACTTTGTTAACTACGGGCTTGTCGGCCACCGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX896670       --> CCAGCAACTATAGCCACCACTTTGTTAACTACGGGCTTGTCGGCCACCGG  Raphanus sativus cv Early Scarlet Globe
EY897883       --> CCAGCAACTATAGCCACCACTTTGTTAACTACGGGCTTGTCGGCCACCGG  Raphanus raphanistrum subsp. maritimus
EY906865       --> CCAGCAACTATAGCCACCACTTTGTTAACAACGGGCTTGTCGGCCACCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY925415       --> CCAGCAACTATAGCCACCACTTTGTTAACTACGGGCTTGTCGGCCACCGG  Raphanus raphanistrum subsp. landra
FD533936       --> CCAGCAACTATGGCCACCACTTTGTTAACTACGGGCTTGTCGGCCACCGG  Raphanus raphanistrum subsp. maritimus
FD534107       --> CCAGCAACTATAGCCACCACTTTGTTAACTACGGGCTTGTCGGCCACCGG  Raphanus raphanistrum subsp. maritimus
FD548917       --> CCAGCAACTATAGCCACCACTTTGTTAACTACGGGCTTGTCGGCCACCGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD970281       --> CCAGCAACTATAGCCACCACTTTGTTAACAACGGGCTTGTCGGCCACCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973614       --> CCAGCAACTATAGCCACCACTTTGTTAACAACGGGCTTGTCGGCCACCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD980600       --> CCAGCAACTATAGCCACCACTTTGTTAACTACGGGCTTGTCGGCCACCGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734922       --> CCAGCAACTATAGCCACCACTTTGTTAACTACGGGCTTGTCGGCCACCGG  Raphanus sativus cv Rat-Tail Radish #3870
EY949495       --> CCAGCAACTATAGCCACCACTTTGTTAACTACGGGCTTGTCGGCCACCGG  Raphanus sativus cv Rat-Tail Radish #3870
FD965212       --> CCAGCAACTATAGCCACCACTTTGTTAACTACGGGCTTGTCGGCCACCGG  Raphanus raphanistrum subsp. maritimus
EX746995       --> CCAGCAACTATAGCCACCACTTTGTTAACTACGGGCTTGTCGGCCACCGG  Raphanus raphanistrum subsp. maritimus
EX886964       --> CCAGCAACTATAGCCACCACTTTGTTAACTACGGGCTTGTCGGCCACCGG  Raphanus sativus var. oleiformis
FD541783       --> CCAGCAACTATAGCCACCACTTTGTTAACAACGGGCTTGTCGGCCACCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD955245       --> CCAGCAACTATAGCCACCACTTTGTTAACTACGGGCTTGTCGGCCACCGG  Raphanus sativus cv Rat-Tail Radish #3870
EX762007       --> CCAGCAACTATAGCCACCACTTTGTTAACTACGGGCTTGTCGGCCACCGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY923705       --> CCAGCAACTATAGCCACCACTTTGTTAACTACGGGCTTGTCGGCCACCGG  Raphanus raphanistrum subsp. landra
FD941476       --> CCAACAACTATAGCCACCACTTTGTTAACTACGGGCTTGTCGGCCACCGG  Raphanus sativus var. oleiformis
FD982149       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX757931       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               250    -    300
UN09687        --> CGGCCTCGGTTTAACGGCTATCCGCATCATCTGGAAGCTCTACAAGCGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758404       <-- CGGCCTCGGTTTAACGGCTATCCGCATCATCTGGAAGCTCTACAAGCGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX768226       <-- CGGCCTCGGTTTAACGGCTATCCGCATCATCTGGAAGCTCTACAAGCGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX900561       <-- CGGCCTCGGTTTAACGGCTATCCGCATCATCTGGAAGTTCTACAAGCGTA  Raphanus sativus cv Early Scarlet Globe
EY902934       <-- CGGCCTCGGTTTAACGGCTATCCGCATCATCTGGAAGCTCTACAAGCGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530124       <-- CGGCCTCGGTTTAACGGCTATCCGCATCATCTGGAAGCTCTACAAGCGTT  Raphanus raphanistrum subsp. maritimus
FD537997       <-- CGGCCTCGGTTTAACGGCTATCCGCATCATCTGGAAGCTCTACAAGCGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969268       <-- CGGCCTCGGTTTAACGGCTATCCGCATCATCTGGAAGCTCTACAAGCGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976465       <-- CGGCCTCGGTTTAACGGCTATCCGCATCATCTGGAAGCTCTACAAGCGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW738542       <-- CGGCCTCGGTTTAACGGCTATCCGCATCATCTGGAAGCTCTACAAGCGTT  Raphanus sativus cv Rat-Tail Radish #3870
EY945003       <-- CGGCCTCGGTTTAACGGCTATCCGCATCATCTGGAAGCTCTACAAGCGTA  Raphanus sativus cv Rat-Tail Radish #3870
FD961017       <-- CGGCCTCGGTTTAACGGCTATCCGCATCATCTGGAAGCTCTACAAGCGTT  Raphanus raphanistrum subsp. maritimus
EX891232       <-- CGGCCTCGGTTTAACGGCTATCCGCATCATCTGGAAGCTCTACAAGCGTA  Raphanus sativus var. oleiformis
FD951327       <-- CGGCCTCGGTTTAACGGCTATCCGCATCATCTGGAAGCTCTACAAGCGTA  Raphanus sativus cv Rat-Tail Radish #3870
EX766376       <-- CGGCCTCGGTTTAACGGCTATCCGCATCATCTGGAAGCTCTACAAGCGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY919467       <-- CGGCCTCGGTTTAACGGCTATCCGCATCATCTGGAAGCTCTGCAAGCGTA  Raphanus raphanistrum subsp. landra
FD529985       <-- CGGCCTCGGTTTAACGGCTATCCGCATCATCTGGAAGCTCTACAAGCGTT  Raphanus raphanistrum subsp. maritimus
FD977770       <-- CGGCCTCGGTTTAACGGCTATCCGCATCATCTGGAAGCTCTACAAGCGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV531930       <-- CGGCCTCGGTTTAACAGCTATCCGCATCATCTGGAAGCTCTACAAGCGTT  Raphanus raphanistrum subsp. maritimus
EX761392       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV536698       --> CGGCCTCGGTTTAACGGCTATCCGCACCATCTGGAAGCTCTACAAGCGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX753978       --> CGGCCTCGGTTTAACGGCTATCCGCATCATCTGGAAGCTCTACAAGCGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX764274       --> CGGCCTCGGTTTAACGGCTATCCGCATCATCTGGAAGCTCTACAAGCGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX896670       --> CGGCCTCGGTTTAACGGCTATCCGCATCATCTGGAAGTTCTACAAGCGTA  Raphanus sativus cv Early Scarlet Globe
EY897883       --> CGGCCTCGGTTTAACGGCTATCCGCATCATCTGGAAGCTCTACAAGCGTT  Raphanus raphanistrum subsp. maritimus
EY906865       --> CGGCCTCGGTTTAACGGCTATCCGCATCATCTGGAAGCTCTACAAGCGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY925415       --> CGGCCTCGGTTTAACGGCTATCCGCATCATCTGGAAGCTCTACAAGCGTA  Raphanus raphanistrum subsp. landra
FD533936       --> CGGCCTCGGTTTAACGGCTATCCGCATCATCTGGAAGCTCTACAAGCGTT  Raphanus raphanistrum subsp. maritimus
FD534107       --> CGGCCTCGGTTTAACGGCTATCCGCATCATCTGGAAGCTCTACAAGCGTT  Raphanus raphanistrum subsp. maritimus
FD548917       --> CGGCCTCGGTTTAACGGCTATCCGCATCATCTGGAAGCTCTACAAGCGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD970281       --> CGGCCTCGGTTTAACGGCTATCCGCATCATCTGGAAGCTCTACAAGCGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973614       --> CGGCCTCGGTTTAACGGCTATCCGCATCATCTGGAAGCTCTACAAGCGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD980600       --> CGGCCTCGGTTTAACGGCTATCCGCATCATCTGGAAGCTCTACAAGCGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734922       --> CGGCCTCGGTTTAACGGCTATCCGCATCATCT..................  Raphanus sativus cv Rat-Tail Radish #3870
EY949495       --> CGGCCTCGGTTTAACGGCTATCCGCATCATCTGGAAGCTCTACAAGCGTA  Raphanus sativus cv Rat-Tail Radish #3870
FD965212       --> CGGCCTCGGTTTAACGGCTATCCGCATCATCTGGAAGCTCTACAAGCGTT  Raphanus raphanistrum subsp. maritimus
EX746995       --> CGGCCTCGGTTTAACGGCTATCCGCATCATCTGGAAGCTCTACAAGCGTT  Raphanus raphanistrum subsp. maritimus
EX886964       --> CGGCCTCGGTTTAACGGCTATCCGCATCATCTGGAAGCTCTACAAGCGTA  Raphanus sativus var. oleiformis
FD541783       --> CGGCCTCGGTTTAACGGCTATCCGCATCATCTGGAAGCTCTACAAGCGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD955245       --> CGGCCTCGGTTTAACGGCTATCCGCATCATCTGGAAGCTCTACAAGCGTA  Raphanus sativus cv Rat-Tail Radish #3870
EX762007       --> CGGCCTCGGTTTAACGGCTATCCGCATCATCTGGAAGCTCTACAAGCGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY923705       --> CGGCCTCGGTTTAACGGCTATCCGCATCATCTGGAAGCTCTGCAAGCGTA  Raphanus raphanistrum subsp. landra
FD941476       --> CGGCCTCGGTTTAACGGCTATCCGCATCATCTGGAATCTCTACAAGCGTT  Raphanus sativus var. oleiformis
FD982149       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX757931       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               300    -    350
UN09687        --> TTAAGGCGAAGGGAGGGTCAAAAATTCCGGGATTGGCCCCGGGGGCTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758404       <-- TTAAGGCGAAGGGAGGGTCAAAAATTCCGGGATTGGCCCCGGGGGCTCCA
EX768226       <-- TTAAGGCGAAGGGAGGGTCAAAAATTCCGGGATTGGCCCCGGGGGCTCCA
EX900561       <-- TTAAGGCGAAGGGAGGGTCAAAAATTCCGGGATTGGCCCCGGGGGCTCCA
EY902934       <-- TTAAGGCGAAGGGAGGGTCAAAAATTCCGGGATTGGCCCCGGGGGCTCCA
FD530124       <-- TTAAGGCGAAGGGAGGGTCAAAAATTCCGGGATTGGCCCCGGGGGCTCCA
FD537997       <-- TTAAGGCGAAGGGAGGGTCAAAAATTCCGGGATTGGCCCCGGGGGCTCCA
FD969268       <-- TTAAGGCGAAGGGAGGGTCAAAAATTCCGGGATTGGCCCCGGGGGCTCCA
FD976465       <-- TTAAGGCGAAGGGAGGGTCAAAAATTCCGGGATTGGCCCCGGGGGCTCCA
EW738542       <-- TTAAGGCGAAGGGAGGGTCAAAAATTCCGGGATTGGCCCCGGGGGCTCCA
EY945003       <-- TTAAGGCGAAGGGAGGGTCAAAAATTCCGGGATTGGCCCCGGGGGCTCCA
FD961017       <-- TTAAGGCGAAGGGAGGGTCAAAAATTCCGGGATTGGCCCCGGGGGCTCCA
EX891232       <-- TTAAGGCGAAGGGAGGGTCAAAAATTCCGGGATTGGCCCCGGGGGCTCCA
FD951327       <-- TTAAGGCGAAGGGAGGGTCAAAAATTCCGGGATTGGCCCCGGGGGCTCCA
EX766376       <-- TTAAGGCTAAGGGAGGGTCAAAAATTCCGGGATTGGCCTCGGGGGCTCCA
EY919467       <-- TTAAGGCGAAGGGAGGGTCAAAAATTCCGGGATTGGCCCCGGGGGCTCCA
FD529985       <-- TTAAGGCGAAGGGAGGGTCAAAAATTCCGGGATTGGCCCCGGGGGCTCCA
FD977770       <-- TTAAGGCGAAGGGAGGGTCAAAAATTCCGGGATTGGCCCCGGGGGCTCCA
EV531930       <-- TTAAGGCGAAGGGAGGGTCAAAAATTCCGGGATTGGCCCCGGGGGCTCCA
EX761392       <-- ..................................................
EV536698       --> TTAAGGCGAAGGGAGGGTCAAAAATTCCGGGATTGGCCCCGGGGGCTCCA
EX753978       --> TTAAGGCGAAGGGAGGGTCAAAAATTCCGGGATTGGCCCCGGGGGCTCCA
EX764274       --> TTAAGGCGAAGGGAGGGTCAAAAATTCCGGGATTGGCCCCGGGGGCTCCA
EX896670       --> TTAAGGCGAAGGGAGGGTCAAAAATTCCGGGATTGGCCCCGGGGGCTCCA
EY897883       --> TTAAGGCGAAGGGAGGGTCAAAAATTCCGGGATTGGCCCCGGGGGCTCCA
EY906865       --> TTAAGGCGAAGGGAGGGTCAAAAATTCCGGGATTGGCCCCGGGGGCTCCA
EY925415       --> TTAAGGCGAAGGGAGGGTCAAAAATTCCGGGATCGGCCCCGGGGGCTCCA
FD533936       --> TTAAGGCGAAGGGAGGGTCAAAAATTCCGGGATTGGCCCCGGGGGCTCCA
FD534107       --> TTAAGGCGAAGGGAGGGTCAAAAATTCCGGGATTGGCCCCGGGGGCTCCA
FD548917       --> TTAAGGCGAAGGGAGGGTCAAAAATTCCGGGATTGGCCCCGGGGGCTCCA
FD970281       --> TTAAGGCGAAGGGAGGGTCAAAAATTCCGGGATTGGCCCCGGGGGCTCCA
FD973614       --> TTAAGGCGAAGGGAGGGTCAAAAATTCCGGGATTGGCCCCGGGGGCTCCA
FD980600       --> TTAAGGCGAAGGGAGGGTCAAAAATTCCGGGATTGGCCCCGGGGGCTCCA
EW734922       --> ..................................................
EY949495       --> TTAAGGCGAAGGGAGGGTCAAAAATTCCGGGATTGGCCCCGGGGGCTCCA
FD965212       --> TTAAGGCGAAGGGAGGGTCAAAAATTCCGGGATTGGCCCCGGGGGCTCCA
EX746995       --> TTAAGGCGAAGGGAGGGTCAAAAATTCCGGGATTGGCCCCGGGGGCTCCA
EX886964       --> TTAAGGCGAAGGGAGGGTCAAAAATTCCGGGATTGGCCCCGGGGGCTCCA
FD541783       --> TTAAGGCGAAGGGAGGGTCAAAAATTCCGGGATTGGCCCCGGGGGCTCCA
FD955245       --> TTAAGGCGAAGGGAGGGTCAAAAATTCCGGGATTGGCCCCGGGGGCTCCA
EX762007       --> TTAAGGCTAAGGGAGGGTCAAAAATTCCGGGATTGGCCTCGGGGGCTCCA
EY923705       --> TTAAGGCGAAGGGAGGGTCAAAAATTCCGGGATTGGCCCCGGGGGCTCCA
FD941476       --> TTAAGGCGAAGGGAGGGTCAAAAATTCCGGGATTGGCCCCGGGGGCTCCA
FD982149       --> .............AGGGTCAAAAATTCCGGGATTGGCCCCGGGGGCTCCA
EX757931       --> ..................................................

               350    -    400
UN09687        --> GACTCTAAGCCAGCGTCTGGGGGGTAAACGGAGTAGGCCTTTCGTAGTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758404       <-- GACTTTAAGCCAGTGTTTGGGGGGTAAACGGAGTAGGCCTTTCGTAGTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX768226       <-- GACTCTAAGCCAGTGTCTGGGGGGTAAACGGAGTAGGCCTTTCGTAGTAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX900561       <-- GACTCTAAGCCAGCGTCTGGGGGGTAAACGAAGTAGGCCTTTCGTAGTAT  Raphanus sativus cv Early Scarlet Globe
EY902934       <-- GACTCTAAGCCAGTGTCTGGGGGGTAAACGGAGTAGGCCTTTCGTAGTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530124       <-- GACTTTAAGCCAGCGTTTGGGGGGTAAACGGAGTAGGCCTTTCGTAGTAT  Raphanus raphanistrum subsp. maritimus
FD537997       <-- GACTTTAAGCCAGTGTCTGGGGG-TAAACGGAGTAGGCCTTTCGTAGTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969268       <-- GACTTTAAGCCAGCGTCTGGGGGGTAAACGGAGTAGGCCTTTCGTAGTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976465       <-- GACTCTAAGCCAGTGTCTGGGGGGTAAACGGAGTAGGCCTTTCGTAGTAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW738542       <-- GACTTTAAGCCAGTGTCTGGGGGGTAAACGGAGTAGGCCTTTCGTAGTAT  Raphanus sativus cv Rat-Tail Radish #3870
EY945003       <-- GACTCTAAGCCAGCGTCTGGGGGGTAAACGAAGTAGGCCTTTCGTAGTAT  Raphanus sativus cv Rat-Tail Radish #3870
FD961017       <-- GACTCTAAGCCAGCGTCTGGGGGGTAAACGGAGTAGGCCTTTCGTAGTAT  Raphanus raphanistrum subsp. maritimus
EX891232       <-- GACTCTAAGCCAGCGTCTGGGGGGTAAACGAAGTAGGCCTTTCGTAGTAT  Raphanus sativus var. oleiformis
FD951327       <-- GACTCTAAGCCAGCGTCTGGGGGGTAAACGAAGTAGGCCTTTCGTAGTAT  Raphanus sativus cv Rat-Tail Radish #3870
EX766376       <-- GACTCTAAGCCAGTGTCTGGGGGGTAAACGGAGTAGGCCTTTCGTAGTAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY919467       <-- GACTCTAAGCCAGCGTCTGGGGGGTAAACGAAGTAGGCCTTTCGTAGTAT  Raphanus raphanistrum subsp. landra
FD529985       <-- GACTCTAAGCCAGCGTCTGGGGGGTAAACGGAGTAGGCCTTTCGTAGTAT  Raphanus raphanistrum subsp. maritimus
FD977770       <-- GACTCTAAGCCAGTGTCTGGGGGGTAAACGGAGTAGGCCTTTCGTAGTAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV531930       <-- GACTATAAGCCA......................................  Raphanus raphanistrum subsp. maritimus
EX761392       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV536698       --> GACTCTAAGCCAGTGTCTGGGGGGTAAACGGAGTAGGCCTTTCGTAGTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX753978       --> GACTCTAAGCCAGTGTCTGGGGGGTAAACGGAGTAGGCCTTTCGTAGTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX764274       --> GACTCTAAGCCAGTGTCTGGGGGGTAAACGGAGTAGGCCTTTCGTAGTAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX896670       --> GACTCTAAGCCAGCGTCTGGGGGGTAAACGAAGTAGGCCTTTCGTAGTAT  Raphanus sativus cv Early Scarlet Globe
EY897883       --> GACTCTAAGCCAGCGTCTGGGGGGTAAACGGAGTAGGCCTTTCGTAGTAT  Raphanus raphanistrum subsp. maritimus
EY906865       --> GACTCTAAGCCAGTGTCTGGGGGGTAAACGGAGTAGGCCTTTCGTAGTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY925415       --> GACTCTAAGCCAGCGTCTGGGGGGTAAACGAAGTAGGCCTTTCGTAGTAT  Raphanus raphanistrum subsp. landra
FD533936       --> GACTCTAAGCCAGCGTCTGGGGGGTAAACGGAGTAGGCCTTTCGTAGTAT  Raphanus raphanistrum subsp. maritimus
FD534107       --> GACTCTAAGCCAGCGTCTGGGGGGTAAACGGAGTAGGCCTTTCGTAGTAT  Raphanus raphanistrum subsp. maritimus
FD548917       --> GACTCTAAGCCAGTGTCTGGGGGGTAAACGGAGTAGGCCTTTCGTAGTAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD970281       --> GACTCTAAGCCAGTGTCTGGGGGGTAAACGGAGTAGGCCTTTCGTAGTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973614       --> GACTCTAAGCCAGCGTCTGGGGGGTAAACGGAGTAGGCCTTTCGTAGTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD980600       --> GACTCTAAGCCAGTGTCTGGGGGGTAAACGGAGTAGGCCTTTCGTAGTAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734922       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY949495       --> GACTCTAAGCCAGCGTCTGGGGGGTAAACGAAGTAGGCCTTTCGTAGTAT  Raphanus sativus cv Rat-Tail Radish #3870
FD965212       --> GACTCTAAGCCAGCGTCTGGGGGGTAAACGGAGTAGGCCTTTCGTAGTAT  Raphanus raphanistrum subsp. maritimus
EX746995       --> GACTCTAAGCCAGCGTCTGGGGGGTAAACGGAGTAGGCCTTTCGTAGTAT  Raphanus raphanistrum subsp. maritimus
EX886964       --> GACTCTAAGCCAGCGTCTGGGGGGTAAACGAAGTAGGCCTTTCGTAGTAT  Raphanus sativus var. oleiformis
FD541783       --> GACTCTAAGCCAGTGTCTGGGGG-TAAACGGAGTAGGCCTTTCGTAGTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD955245       --> GACTCTAAGCCAGCGTCTGGGGGGTAAACGAAGTAGGCCTTTCGTAGTAT  Raphanus sativus cv Rat-Tail Radish #3870
EX762007       --> GACTCTAAGCCAGTGTCTGGGGGGTAAACGGAGTAGGCCTTTCGTAGTAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY923705       --> GACTCTAAGCCAGCGTCTGGGGGGTAAACGAAGTAGGCCTTTCGTAGTAT  Raphanus raphanistrum subsp. landra
FD941476       --> GACTCTAAGCCAGCGTCTGGGGGGTAAACGGAGTAGGCCTTTCGTAGTAT  Raphanus sativus var. oleiformis
FD982149       --> GACTCTAAGCCAGTGTCTGGGGGGTAAACGGAGTAGGCCTTTCGTAGTAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX757931       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               400    -    450
UN09687        --> GAGATGATCTAAGGGGGAATTAAATGAGAATTATTGGGGTTCCTTAAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758404       <-- GAGATGATCTAAGGGGGAATTAAATGAGAATTATTGGGGTTCCTTAAATA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX768226       <-- GAGATGATCTAAGGGGGAATTAAATGAGAATTATTGGGGTTCCTTAAATA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX900561       <-- GAGATGATCTAAGGGGGAATTAAATGAGAATTATTGGGGTTCCTTAAATA  Raphanus sativus cv Early Scarlet Globe
EY902934       <-- GAGATGATCTAAGGGGGAATTAAATGAGAATTATTGGGGTTCCTTAAATA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530124       <-- GAGATGATCTAAGGGGGAAATAAATGAGAATTATTGGGGTTCCTTAAATA  Raphanus raphanistrum subsp. maritimus
FD537997       <-- GAGATGATTTAAGGGGGAATTAAATGAGAATTATTGGGGTTCCTTAAATA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969268       <-- GAGATGATCTAAGGGGGAATTAAATGAGAATTATTGGGGTTCCTTAAATA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976465       <-- GAGATGATCTAAGGGGGAATTAAATGAGAATTATTGGGGTTCCTTAAATA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW738542       <-- GAGATGATCTAAGGGGGAATTAAATGAGAATTATTGGGGTTCCTTAAATA  Raphanus sativus cv Rat-Tail Radish #3870
EY945003       <-- GAGATGATCTAAGGGGGAATTAAATGAGAATTATTGGGGTTCCTTAAATA  Raphanus sativus cv Rat-Tail Radish #3870
FD961017       <-- GAGATGATCTAAGGGGGAAATAAATGAGAATTATTGGGGTTCCTTAAATA  Raphanus raphanistrum subsp. maritimus
EX891232       <-- GAGATGATCTAAGGGGGAATTAAATGAGAATTATTGGGGTTCCTTAAATA  Raphanus sativus var. oleiformis
FD951327       <-- GAGATGATCTAAGGGGGAATTAAATGAGAATTATTGGGGTTCCTTAAATA  Raphanus sativus cv Rat-Tail Radish #3870
EX766376       <-- GAGATGATCTAAGGGGGAATTAAATGAGAATTATTGGGGTTCCTTAAATA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY919467       <-- GAGATGATCTAAGGGGGAATTAAATGAGAATTATTAGGGTTCCTTAAATA  Raphanus raphanistrum subsp. landra
FD529985       <-- GAGATGATCTAAGGGGGAAATAAATGAGAATTATTGGGGTTCCTTAAATA  Raphanus raphanistrum subsp. maritimus
FD977770       <-- GAGATGATCTAAGGGGGAATTAAATGAGAATTATTGGGGTTCCTTAAATA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV531930       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX761392       <-- ...........gGGGGGAATTAAATGAGAATTATTGGGGTTCCTTAAATA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV536698       --> GAGATGATCTAAGGGGGAATTAAATGAGAATTATTGGGGTTCCTTAAATA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX753978       --> GAGATGATCTAAGGGGGAATTAAATGAGAATTATTGGGGTTCCTTAAATA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX764274       --> GAGATGATCTAAGGGGGAATTAAATGAGAATTATTGGGGTTCCTTAAATA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX896670       --> GAGATGATCTAAGGGGGAATTAAATGAGAATTATTGGGGTTCCTTAAATA  Raphanus sativus cv Early Scarlet Globe
EY897883       --> GAGATGATCTAAGGGGGAAATAAATGAGAATTATTGGGGTTCCTTAAATA  Raphanus raphanistrum subsp. maritimus
EY906865       --> GAGATGATCTAAGGGGGAATTAAATGAGAATTATTGGGGTTCCTTAAATA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY925415       --> GAGATGATCTAAGGGGGAATTAAATGAGAATTATTGGGGTTCCTTAAATA  Raphanus raphanistrum subsp. landra
FD533936       --> GAGATGATCTAAGGGGGAAATAAATGAGAATTATTGGGGTTCCTTAAATA  Raphanus raphanistrum subsp. maritimus
FD534107       --> GAGATGATCTAAGGGGGAAATAAATGAGAATTATTGGGGTTCCTTAAATA  Raphanus raphanistrum subsp. maritimus
FD548917       --> GAGATGATCTAAGGGGGAATTAAATGAGAATTATTGGGGTTCCTTAAATA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD970281       --> GAGATGATCTAAGGGGGAATTAAATGAGAATTATTGGGGTTCCTTAAATA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973614       --> GAGATGATCTAAGGGGGAATTAAATGAGAATTATTGGGGTTCCTTAAATA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD980600       --> GAGATGATCTAAGGGGGAATTAAATGAGAATTATTGGGGTTCCTTAAATA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734922       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY949495       --> GAGATGATCTAAGGGGGAATTAAATGAGAATTATTGGGGTTCCTTAAATA  Raphanus sativus cv Rat-Tail Radish #3870
FD965212       --> GAGATGATCTAAGGGGGAAATAAATGAGAATTATTGGGGTTCCTTAAATA  Raphanus raphanistrum subsp. maritimus
EX746995       --> GAGATGATCTAAGGGGGAAATAAATGAGAATTATTGGGGTTCCTTAAATA  Raphanus raphanistrum subsp. maritimus
EX886964       --> GAGATGATCTAAGGGGGAATTAAATGAGAATTATTGGGGTTCCTTAAATA  Raphanus sativus var. oleiformis
FD541783       --> GAGATGATCTAAGGGGGAATTAAATGAGAATTATTGGGGTTCCTTAAATA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD955245       --> GAGATGATCTAAGGGGGAATTAAATGAGAATTATTGGGGTTCCTTAAATA  Raphanus sativus cv Rat-Tail Radish #3870
EX762007       --> GAGATGATCTAAGGGGGAATTAAATGAGAATTATTGGGGTTCCTTAAATA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY923705       --> GAGATGATCTAAGGGGGAATTAAATGAGAATTATTAGGGTTCCTTAAATA  Raphanus raphanistrum subsp. landra
FD941476       --> GAGATGATCTAAGGGGGAAATAAATGAGAATTATTGGGGTTCCTTAAATA  Raphanus sativus var. oleiformis
FD982149       --> GAGATGATCTAAGGGGGAATTAAATGAGAATTATTGGGGTTCCTTAAATA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX757931       --> ...........gGGGGGAATTAAATGAGAATTATTGGGGTTCCTTAAATA  Raphanus raphanistrum subsp. raphanistrum (MS)

               450    -    500
UN09687        --> AAGCCTAAAATTATCCACTTTCTTTAATATAATACTAATTACACGCGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758404       <-- AAGCCTAAAATTATCCACTTTCTTTAATATAATACTAATTACACGCGGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX768226       <-- AAGCCTAAAATTATCCACTTTCTTTAATATAATACTAATTACACGCGGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX900561       <-- AAGCCTAAAATTATCCACTCTCTTTAATATAATACTAATTACACGCGGAT  Raphanus sativus cv Early Scarlet Globe
EY902934       <-- AAGCCTAAAATTATCCACTTTCTTTAATATAATACTAATTACACGCGGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530124       <-- AGGCCTAAAATTATCCACTCTCTTTGATATAATACTAATTACACGCGGAT  Raphanus raphanistrum subsp. maritimus
FD537997       <-- AAGCCTAAAATTATCCACTTTCTTTAATATAATACTAATTACACGCGGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969268       <-- AAGCCTAAAATTATCCACTTTCTTTAATATAATACTAATTACACGCGGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976465       <-- AAGCCTAAAATTATCCACTTTCTTTAATATAATACTAATTACACGCGGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW738542       <-- AAGCCTAAAATTATCCACTTTCTTTAATATAATACTAATTACACGCGGAT  Raphanus sativus cv Rat-Tail Radish #3870
EY945003       <-- AAGCCTAAAATTATCCACTCTCTTTAATATAATACTAATTACACGCGGAT  Raphanus sativus cv Rat-Tail Radish #3870
FD961017       <-- AAGCCTAAAATTATCCACTCTCTTTGATATAATACTAATTACACGCGGAT  Raphanus raphanistrum subsp. maritimus
EX891232       <-- AAGCCTAAAATTATCCACTCTCTTTAATATAATACTAATTACACGCGGAT  Raphanus sativus var. oleiformis
FD951327       <-- AAGCCTAAAATTATCCACTCTCTTTAATATAATACTAATTACACGCGGAT  Raphanus sativus cv Rat-Tail Radish #3870
EX766376       <-- AAGCCTAAAATTATCCACTTTCTTTAATATAATACTAATTACACGCGGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY919467       <-- AAGCCTAAAATTATCCACTCTCTTTAATATAATACTAATTACACGCGGAT  Raphanus raphanistrum subsp. landra
FD529985       <-- AAGCCTAAAATTATCCACTCTCTTTGATATAATACTAATTACACGCGGAT  Raphanus raphanistrum subsp. maritimus
FD977770       <-- AAGCCTAAAATTATCCACTTTCTTTAATATAATACTAATTACACGCGGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV531930       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX761392       <-- AAGCCTAAAATTATCCACTTTCTTTAATATAATACTAATTACACGCGGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV536698       --> AAGCCTAAAATTATCCACTTTCTTTAATATAATACTAATTACACGCGGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX753978       --> AAGCCTAAAATTATCCACTTTCTTTAATATAATACTAATTACACGCGGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX764274       --> AAGCCTAAAATTATCCACTTTCTTTAATATAATACTAATTACACGCGGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX896670       --> AAGCCTAAAATTATCCACTCTCTTTAATATAATACTAATTACACGCGGAT  Raphanus sativus cv Early Scarlet Globe
EY897883       --> AAGCCTAAAATTATCCACTCTCTTTGATATAATACTAATTACACGCGGAT  Raphanus raphanistrum subsp. maritimus
EY906865       --> AAGCCTAAAATTATCCACTTTCTTTAATATAATACTAATTACACGCGGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY925415       --> AAGCCTAAAATTATCCACTCTCTTTAATATAATACTAATTACACGCGGAT  Raphanus raphanistrum subsp. landra
FD533936       --> AAGCCTAAAATTATCCACTCTCTTTGATATAATACTAATTACACGCGGAT  Raphanus raphanistrum subsp. maritimus
FD534107       --> AGGCCTAAAATTATCCACTCTCTTTGATATAATACTAATTACACGCGGAT  Raphanus raphanistrum subsp. maritimus
FD548917       --> AAGCCTAAAATTATCCACTTTCTTTAATATAATACTAATTACACGCGGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD970281       --> AAGCCTAAAATTATCCACTTTCTTTAATATAATACTAATTACACGCGGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973614       --> AAGCCTAAAATTATCCACTTTCTTTAATATAATACTAATTACACGCGGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD980600       --> AAGCCTAAAATTATCCACTTTCTTTAATATAATACTAATTACACGCGGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734922       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY949495       --> AAGCCTAAAATTATCCACTCTCTTTAATATAATACTAATTACACGCGGAT  Raphanus sativus cv Rat-Tail Radish #3870
FD965212       --> AAGCCTAAAATTATCCACTCTCTTTGATATAATACTAATTACACGCGGAT  Raphanus raphanistrum subsp. maritimus
EX746995       --> AAGCCTAAAATTATCCACTCTCTTTGATATAATACTAATTACACGCGGAT  Raphanus raphanistrum subsp. maritimus
EX886964       --> AAGCCTAAAATTATCCACTCTCTTTAATATAATACTAATTACACGCGGAT  Raphanus sativus var. oleiformis
FD541783       --> AAGCCTAAAATTATCCACTTTCTTTAATATAATACTAATTACACGCGGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD955245       --> AAGCCTAAAATTATCCACTCTCTTTAATATAATACTAATTACACGCGGAT  Raphanus sativus cv Rat-Tail Radish #3870
EX762007       --> AAGCCTAAAATTATCCACTTTCTTTAATATAATACTAATTACACGCGGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY923705       --> AAGCCTAAAATTATCCACTCTCTTTAATATAATACTAATTACACGCGGAT  Raphanus raphanistrum subsp. landra
FD941476       --> AAGCCTAAAATTATCCACTCTCTTTGATATAATACTAATTACACGCGGAT  Raphanus sativus var. oleiformis
FD982149       --> AAGCCTAAAATTATCCACTTTCTTTAATATAATACTAATTACACGCGGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX757931       --> AAGCCTAAAATTATCCACTTTCTTTAATATAATACTAATTACACGCGGAT  Raphanus raphanistrum subsp. raphanistrum (MS)

               500    -    550
UN09687        --> GAACCTAATGTTTCAAATACCATTCTTCATATGTATATCGTGTTACGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758404       <-- GAACCTAATGTTTCAAATACCATTCTTCATATGTATATCGTGTTACGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX768226       <-- GAACCTAATGTTTCAAATACCATTCTTCATATGTATATCGTGTTACGAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX900561       <-- GAACCAAATGTTCCAAATACCATTCTTCATATGTATATCGTGTTACGAAA  Raphanus sativus cv Early Scarlet Globe
EY902934       <-- GAACCTAATGTTTCAAATACCATTCTTCATATGTATATCGTGTTACGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530124       <-- GAACCTGATGTTTCAAATACCATTCTTCATATGTATATCGTGTTACGAAA  Raphanus raphanistrum subsp. maritimus
FD537997       <-- GAACCTAATGTTTCAAATACCATTCTTCATATGTATATCGTGTTACGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969268       <-- GAACCTAATGTTTCAAATACCATTCTTCATATGTATATCGTGTTACGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976465       <-- GAACCTAATGTTTCAAATACCATTCTTCATATGTATATCGTGTTACGAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW738542       <-- GAACCTAATATTTCAAATACCATTCTTCATATGTATATCGTGTTACGAAA  Raphanus sativus cv Rat-Tail Radish #3870
EY945003       <-- GAACCAAATGTTTCAAATACCATTCTTCATATGTATATCGTGTTACGAAA  Raphanus sativus cv Rat-Tail Radish #3870
FD961017       <-- GAACCTAATGTTTCAAATACCATTCTTCATATGTATATCGTGTTACGAAA  Raphanus raphanistrum subsp. maritimus
EX891232       <-- GAACCTAATGTTTCAAATACCATTCTTCATATGTATATCGTGTTACGAAA  Raphanus sativus var. oleiformis
FD951327       <-- GAACCAAATGTTTCAAATACCATTCTTCATATGTATATCGTGTTACGAAA  Raphanus sativus cv Rat-Tail Radish #3870
EX766376       <-- GAACCTAATGTTTCAAATACCATTCTTCATATGTATATCGTGTTACGAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY919467       <-- GAACCAAATGTTTCAAATACCATTCTTCATATGTATATCGTGTTACGGAA  Raphanus raphanistrum subsp. landra
FD529985       <-- GAACCTAATGTTTCAAATACCATTCTTCATATGTATATCGTGTTACGAAA  Raphanus raphanistrum subsp. maritimus
FD977770       <-- GAACCTAATGTTTCAAATACCATTCTTCATATGTATATCGTGTTACGAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV531930       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX761392       <-- GAACCTAATGTTTCAAATACCATTCTTCATATGTATATCGTGTTACGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV536698       --> GAACCTAATGTTTCAAATACCATTCTTCATATGTATATCGTGTTACGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX753978       --> GAACCTAATGTTTCAAATACCATTCTTCATATGTATATCGTGTTACGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX764274       --> GAACCTAATGTTTCAAATACCATTCTTCATATGTATATCGTGTTACGAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX896670       --> GAACCAAATGTTCCAAATACCATTCTTCATATGTATATCGTGTTACGAAA  Raphanus sativus cv Early Scarlet Globe
EY897883       --> GAACCTAATGTTTCAAATACCATTCTTCATATGTATATCGTGTTACGAAA  Raphanus raphanistrum subsp. maritimus
EY906865       --> GAACCTAATGTTTCAAATACCATTCTTCATATGTATATCGTGTTACGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY925415       --> GAACCAAATGTTTCAAATACCATTCTTCATATGTATATCGTGTTACGAAA  Raphanus raphanistrum subsp. landra
FD533936       --> GAACCTAATGTTTCAAATACCATTCTTCATATGTATATCGTGTTACGAAA  Raphanus raphanistrum subsp. maritimus
FD534107       --> GAACCTGATGTTTCAAATACCATTCTTCATATGTATATCGTGTTACGAAA  Raphanus raphanistrum subsp. maritimus
FD548917       --> GAACCTAATGTTTCAAATACCATTCTTCATATGTATATCGTGTTACGAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD970281       --> GAACCTAATGTTTCAAATACCATTCTTCATATGTATATCGTGTTACGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973614       --> GAACCTAATGTTTCAAATACCATTCTTCATATGTATATCGTGTTACGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD980600       --> GAACCTAATGTTTCAAATACCATTCTTCATATGTATATCGTGTTACGAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734922       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY949495       --> GAACCAAATGTTTCAAATACCATTCTTCATATGTATATCGTGTTACGAAA  Raphanus sativus cv Rat-Tail Radish #3870
FD965212       --> GAACCTAATGTTTCAAATACCATTCTTCATATGTATATCGTGTTACGAAA  Raphanus raphanistrum subsp. maritimus
EX746995       --> GAACCTAATGTTTCAAATACCATTCTTCATATGTATATCGTGTTACGAAA  Raphanus raphanistrum subsp. maritimus
EX886964       --> GAACCTAATGTTTCAAATACCATTCTTCATATGTATATCGTGTTACGAAA  Raphanus sativus var. oleiformis
FD541783       --> GAACCTAATGTTTCAAATACCATTCTTCATATGTATATCGTGTTACGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD955245       --> GAACCAAATGTTTCAAATACCATTCTTCATATGTATATCGTGTTACGAAA  Raphanus sativus cv Rat-Tail Radish #3870
EX762007       --> GAACCTAATGTTTCAAATACCATTCTTCATATGTATATCGTGTTACGAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY923705       --> GAACCAAATGTTTCAAATACCATTCTTCATATGTATATCGTGTTACGGAA  Raphanus raphanistrum subsp. landra
FD941476       --> GAACCTAATGTTTCAAATACCATTCTTCATATGTATATCGTGTTACGAAA  Raphanus sativus var. oleiformis
FD982149       --> GAACCTAATGTTTCAAATACCATTCTTCATATGTATATCGTGTTACGAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX757931       --> GAACCTAATGTTTCAAATACCATTCTTCATATGTATATCGTGTTACGAAA  Raphanus raphanistrum subsp. raphanistrum (MS)

               550    -    600
UN09687        --> TTATAATAAATGTACTCGATTGTGTTGTAACGAATCAAGTGATATCAGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758404       <-- TTATAATAAATGTACTCGATTGTGTTGTAACGAATCAAGTGATATCAGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX768226       <-- TTATAATAAATGTACTCGATTTTGTTGT......................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX900561       <-- TTATAATAAATGTACTCGATTGTGTTGc......................  Raphanus sativus cv Early Scarlet Globe
EY902934       <-- TTATAATAAATGTACTCGATTGTGTTGTAACG..................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530124       <-- TTATAATAAATTTACTCGATTGTGTTGg......................  Raphanus raphanistrum subsp. maritimus
FD537997       <-- TTATAATAAATGTACTCGATTGTGTTGTAACGAATCAAGTGATATCAGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969268       <-- TTATAATAAATGTACTCGATTGTGTTGTAACGAATCAAGTGATATCAGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976465       <-- TTATAATAAATGTACTCGATTGTGTTGTAACGAATCAAGTGATATCAGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW738542       <-- TTATAATAAATGTACTCGATTGTGTTGTAACGAATCAAGTGATATCAGTG  Raphanus sativus cv Rat-Tail Radish #3870
EY945003       <-- TTATAATAAATGTACTCGATTGTGTTGTAACG..................  Raphanus sativus cv Rat-Tail Radish #3870
FD961017       <-- TTATAATAAATTTACTC.................................  Raphanus raphanistrum subsp. maritimus
EX891232       <-- TTATAATAAATGTACTCGATTGTGTTGTAACc..................  Raphanus sativus var. oleiformis
FD951327       <-- TTATAATAAATGTACTCGATTGTGTTGTAACG..................  Raphanus sativus cv Rat-Tail Radish #3870
EX766376       <-- TTATAATAAATGTACTCGATTGTGTTGTAACG..................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY919467       <-- TTATAATAAATGTACTCGATTGTGTTGT......................  Raphanus raphanistrum subsp. landra
FD529985       <-- TTATAATAAATTTACTCGATTGTGTTGTAACGAATCAAGTGATATCAGTG  Raphanus raphanistrum subsp. maritimus
FD977770       <-- TTATAATAAATGTACTCGATTGTGTTGTAACGAATCAAGTGATATCAGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV531930       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX761392       <-- TTATAATAAATGTACTCGATTGTGTTGTAACGAATCAAGTGATATTAGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV536698       --> TTATAATAAATGTACTCGATTGTGTTGTAACGAATCAAGTGATATCAGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX753978       --> TTATAATAAATGTACTCGATTGTGTTGTAACGAATCAAGTGATATCAGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX764274       --> TTATAATAAATGTACTCGATTTTGTTGT......................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX896670       --> TTATAATAAATGTACTCGATTGTGTTGc......................  Raphanus sativus cv Early Scarlet Globe
EY897883       --> TTATAATAAATTTACTCGATTGTGTTGTAACGAATCAAGTGATATCAGTG  Raphanus raphanistrum subsp. maritimus
EY906865       --> TTATAATAAATGTACTCGATTGTGTTGTAACG..................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY925415       --> TTATAATAAATGTA....................................  Raphanus raphanistrum subsp. landra
FD533936       --> TTATAATAAATTTACTCGATTGTGTTGTAACGAATCAAGTGATATCAGTG  Raphanus raphanistrum subsp. maritimus
FD534107       --> TTATAATAAATTTACTCGATTGTGTTGg......................  Raphanus raphanistrum subsp. maritimus
FD548917       --> TTATAATAAATGTACTCGATTGTGTTGTAACGAATCAAGTGATATCAGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD970281       --> TTATAATAAATGTACTCGATTGTGTTGTAACGAATCAAGTGATATCAGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973614       --> TTATAATAAATGTACTCGATTGTGTTGTAACGAATCAAGTGATATCAGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD980600       --> TTATAATAAATGTACTCGATTGTGTTGTAACGAATCAAGTGATATCAGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734922       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY949495       --> TTATAATAAATGTACTCGATTGTGTTGTAACG..................  Raphanus sativus cv Rat-Tail Radish #3870
FD965212       --> TTATAATAAATTTACTC.................................  Raphanus raphanistrum subsp. maritimus
EX746995       --> TTATAATAAATTTACTCGATTGTGTTGTA.....................  Raphanus raphanistrum subsp. maritimus
EX886964       --> TTATAATAAATGTACTCGATTGTGTTGTAACc..................  Raphanus sativus var. oleiformis
FD541783       --> TTATAATAAATGTACTCGATTGTGTTGTAACGAATCAAGTGATATCAGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD955245       --> TTATAATAAATGTACTCGATTGTGTTGTAACG..................  Raphanus sativus cv Rat-Tail Radish #3870
EX762007       --> TTATAATAAATGTACTCGATTGTGTTGTAACG..................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY923705       --> TTATAATAAATGTACTCGATTGTGTTGT......................  Raphanus raphanistrum subsp. landra
FD941476       --> TTATAATAAATTTACTCGATTGTGTTGTAACGAATCAAGTGATATCAGTG  Raphanus sativus var. oleiformis
FD982149       --> TTATAATAAATGTACTCGATTGTGTTGTAACGAATCAAGTGATATCAGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX757931       --> TTATAATAAATGTACTCGATTGTGTTGTAACGAATCAAGTGATATTAGTG  Raphanus raphanistrum subsp. raphanistrum (MS)

               600    -    650
UN09687        --> ATATTACCATAGATTATTATAGTCAAGTTACATTGTTGATTCACTGAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758404       <-- ATATTACCATAGATTATTATAGTCAAGTTACATTGTTGATTCACTG....  Raphanus raphanistrum subsp. raphanistrum (MS)
EX768226       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX900561       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY902934       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530124       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD537997       <-- ATATTACCATAGATTATTATAGTCAAGTTACATTGTT.............  Raphanus raphanistrum subsp. raphanistrum (MS)
FD969268       <-- ATATTACCATAGATTATTATAGTCAAGTTACATTGTTGATTCACTGAATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976465       <-- AGATTACCATAGATTATTATAGTCA.........................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW738542       <-- AGATTACCATAGATTATTATAGcc..........................  Raphanus sativus cv Rat-Tail Radish #3870
EY945003       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD961017       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX891232       <-- ..................................................  Raphanus sativus var. oleiformis
FD951327       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX766376       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY919467       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD529985       <-- AGATTACCATAGATTATTATAGTCAAGTTACATTGTTGATTCACTGAATC  Raphanus raphanistrum subsp. maritimus
FD977770       <-- AGATTACCATAGATTATTATAGTCAAGTTACATTGTTGATTCACTGAATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV531930       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX761392       <-- ATATTACCATAGATTATTATAGTCAAGTTACATTGTTGATTCACTGAATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV536698       --> ATATTACCATAGATTATTATAGTCAAGTTGCATTGTTGATTCACTGAATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX753978       --> ATATTACCATAGATTATTATAGTCAAGTTACATTGTTGATTCACTG....  Raphanus raphanistrum subsp. raphanistrum (MS)
EX764274       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX896670       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY897883       --> AGATTACCATAGATTATTATAGTCAAGTTACATTGTTGATTCACTGAATC  Raphanus raphanistrum subsp. maritimus
EY906865       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY925415       --> ..................................................  Raphanus raphanistrum subsp. landra
FD533936       --> AGATTACCATAGATTATTATAGTCAAGTTACATTGTTGATTCACTGAATC  Raphanus raphanistrum subsp. maritimus
FD534107       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD548917       --> AGATTACCATAGATTATTATAGTCAAGTTACATTGTTGATTCACTGA...  Raphanus raphanistrum subsp. raphanistrum (NY)
FD970281       --> ATATTACCATAGATTATTATAGTCAAGTTACATTGT..............  Raphanus raphanistrum subsp. raphanistrum (MS)
FD973614       --> ATATTACCATAGATTATTATAGTCAAGTTACATTGTTGATTCACTGAATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD980600       --> AGATTACCATAGATTATTATAGTCA.........................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734922       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY949495       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD965212       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX746995       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX886964       --> ..................................................  Raphanus sativus var. oleiformis
FD541783       --> ATATTACCATAGATTATTATAGTCAAGTTACATTGTT.............  Raphanus raphanistrum subsp. raphanistrum (MS)
FD955245       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX762007       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY923705       --> ..................................................  Raphanus raphanistrum subsp. landra
FD941476       --> AGATTACCATAGATTATTATAGTCAAGTTACATTGTTGATTCACTGAATC  Raphanus sativus var. oleiformis
FD982149       --> AGATTACCATAGATTATTATAGTCAAGTTACATTGTTGATTCACTGAATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX757931       --> ATATTACCATAGATTATTATAGTCAAGTTACATTGTTGATTCACTGAATC  Raphanus raphanistrum subsp. raphanistrum (MS)

               650    -    700
UN09687        --> ATTCGACTTTGAACCAAGTGTTGTTTCTACCACATTATGTTTTAAAAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758404       <-- ..................................................
EX768226       <-- ..................................................
EX900561       <-- ..................................................
EY902934       <-- ..................................................
FD530124       <-- ..................................................
FD537997       <-- ..................................................
FD969268       <-- ATTCGACTTTGAACCAAGTGTTGTTTCTACCACATTATGTTTTAAAAGAT
FD976465       <-- ..................................................
EW738542       <-- ..................................................
EY945003       <-- ..................................................
FD961017       <-- ..................................................
EX891232       <-- ..................................................
FD951327       <-- ..................................................
EX766376       <-- ..................................................
EY919467       <-- ..................................................
FD529985       <-- ATTCGACTTTGAACCAAGTGTTGTTTCTACCACATTATGTTTTAAAAGAT
FD977770       <-- ATTCGACTTTGAACCAAGTGTTGTTTCTACC...................
EV531930       <-- ..................................................
EX761392       <-- ATTCGACTTTGAACCAAGTGTTGTTTCTACCACATTATGTTTTAAAAGAT
EV536698       --> ATTCGACTTTGAACCAAGTGTTGTTTCTAC-ACATTATGT..........
EX753978       --> ..................................................
EX764274       --> ..................................................
EX896670       --> ..................................................
EY897883       --> ATTCGACTTTGAACCAAGTGTTGTTTCTACCACATTATGTTTTAAA-GAT
EY906865       --> ..................................................
EY925415       --> ..................................................
FD533936       --> ATTCGACTTTGAACCAAGTGTTGTTTCTACCACATTATGTTTTAAAAGAT
FD534107       --> ..................................................
FD548917       --> ..................................................
FD970281       --> ..................................................
FD973614       --> ATTCGACTTTGAACCAAGTGTTGTTTCTACCACATTATGTTTTA......
FD980600       --> ..................................................
EW734922       --> ..................................................
EY949495       --> ..................................................
FD965212       --> ..................................................
EX746995       --> ..................................................
EX886964       --> ..................................................
FD541783       --> ..................................................
FD955245       --> ..................................................
EX762007       --> ..................................................
EY923705       --> ..................................................
FD941476       --> ATTCGACTTTGAACCAAGTGTTGTTTCTACTACATTATGTTTTAAAAGAT
FD982149       --> ATTCGACTTTGAACCAAGTGTTGT..........................
EX757931       --> ATTCGACTTTGAACCAAGTGTTGTTTCTACCACATTATGTTTTAAAAGAT

               700    -    750
UN09687        --> AAGCCTTAAAGTTCTTAATTTGCAACTACCGATTTTATCTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758404       <-- ...........................................
EX768226       <-- ...........................................
EX900561       <-- ...........................................
EY902934       <-- ...........................................
FD530124       <-- ...........................................
FD537997       <-- ...........................................
FD969268       <-- AAGCCTTAAAGTTCTT...........................
FD976465       <-- ...........................................
EW738542       <-- ...........................................
EY945003       <-- ...........................................
FD961017       <-- ...........................................
EX891232       <-- ...........................................
FD951327       <-- ...........................................
EX766376       <-- ...........................................
EY919467       <-- ...........................................
FD529985       <-- AAGCCTTAAAGTTCTT...........................
FD977770       <-- ...........................................
EV531930       <-- ...........................................
EX761392       <-- AAGCCTTAAAGTTCTTAATTTGCAACTACCGATTTTATCTGAT
EV536698       --> ...........................................
EX753978       --> ...........................................
EX764274       --> ...........................................
EX896670       --> ...........................................
EY897883       --> AAGCCTTAA..................................
EY906865       --> ...........................................
EY925415       --> ...........................................
FD533936       --> AAGC.......................................
FD534107       --> ...........................................
FD548917       --> ...........................................
FD970281       --> ...........................................
FD973614       --> ...........................................
FD980600       --> ...........................................
EW734922       --> ...........................................
EY949495       --> ...........................................
FD965212       --> ...........................................
EX746995       --> ...........................................
EX886964       --> ...........................................
FD541783       --> ...........................................
FD955245       --> ...........................................
EX762007       --> ...........................................
EY923705       --> ...........................................
FD941476       --> AAGCCTTAA-GTTCTTAATTTGCAACTACCGATTTTATCTG..
FD982149       --> ...........................................
EX757931       --> AAGCCTTAAAGTTCTTAATTTGCAACTACCGATTTTATCTGAT