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Alignment for radish unigene UN09778

               1      -     51
UN09778        --> CTGAAAAATAAAACCATATAATACTGAACTTGGTAGAAAGATACACAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444765       <-- ..................................................
FY438656       <-- ..................................................
FY440559       <-- ..................................................
FD563512       <-- ..................................................
FD561044       <-- ..................................................
FD982031       <-- ..................................................
FY449388       <-- ..................................................
FY428972       <-- ..................................................
FD547344       --> CTGCAAAATAAAACCATATAATACTGAACTTGGTAGAAAGATACACAAGA
FD977681       --> CTGAAAAATAAAACCATATAATACTGAACTTGGTAGAAAGATACACAAGA
EY934462       --> ..................................................
FD941385       --> ..................................................
FD947617       --> ..................................................
FD548584       --> ..................................................
FD549450       --> ..................................................

               51     -    101
UN09778        --> AAAATG-ATCTCAAAAGCTTAGAAGAAATGAACAAAGCACACTCTAAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444765       <-- ..................................................
FY438656       <-- ..................................................
FY440559       <-- ..................................................
FD563512       <-- ..................................................
FD561044       <-- ..................................................
FD982031       <-- ..................................................
FY449388       <-- ..................................................
FY428972       <-- ..................................................
FD547344       --> AAAAAGTATCTCAAAAGCTTAGAAGAAATAAACAAAGCACACTCTAAAAT
FD977681       --> AAAATG-ATCTCAAAAGCTTAGAAGAAATGAACAAAGCACACTCTAAAAT
EY934462       --> ..................................................
FD941385       --> ..................................................
FD947617       --> ..................................................
FD548584       --> ..................................................
FD549450       --> ..................................................

               101    -    151
UN09778        --> CTTTCCTGTTTTCGTATCAGAGAATAACAAACTCAGAAGAAAAGAAAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444765       <-- ..................................................
FY438656       <-- ..................................................
FY440559       <-- ..................................................
FD563512       <-- ..................................................
FD561044       <-- ..................................................
FD982031       <-- ..................................................
FY449388       <-- ..................................................
FY428972       <-- ..................................................
FD547344       --> CTTTCCTGTTTTCGTACCAGAGAATAACAAACTCAGAAGAAAAGAAAAAA
FD977681       --> CATTCCTGTTTTCGTATCAGAGAATAACAAACTCAGAAGAAAAGAAAAAA
EY934462       --> ........................................AAAGAAAAAA
FD941385       --> ..................................................
FD947617       --> ..................................................
FD548584       --> ..................................................
FD549450       --> ..................................................

               151    -    201
UN09778        --> AGAATAAACAAAAGCCATTGATGTATTTTTGTACCTCGTTTTCTTAAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444765       <-- ..................................................
FY438656       <-- ..................................................
FY440559       <-- ..................................................
FD563512       <-- ..................................................
FD561044       <-- ..................................................
FD982031       <-- ..................................................
FY449388       <-- ..................................................
FY428972       <-- ..................................................
FD547344       --> -GAATAAACAAAAGCCATTGATGTATTTT---ACCTCGTTTTCTTAAGGA
FD977681       --> AGAATAAACAAAAGCCATTGATGTATTTTTGTACCTCGTTTTCTTAAGGA
EY934462       --> AGAATAAACAAAAGCCATTGATGTATTTTTGTACCTCGTTTTCTTAAGGA
FD941385       --> ..................................................
FD947617       --> ..................................................
FD548584       --> ..................................................
FD549450       --> ..................................................

               201    -    251
UN09778        --> TGAAAGATA-CGAGATACTTATATATAGAGAGA---AA-GTAGGAGATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444765       <-- ..................................................
FY438656       <-- ..................................................
FY440559       <-- ..................................................
FD563512       <-- ..................................................
FD561044       <-- ..................................................
FD982031       <-- ..................................................
FY449388       <-- ..................................................
FY428972       <-- ..................................................
FD547344       --> TGAAAGATATCGAGATACTTATATATAGAGAGAGAGAATGTAGGAGATTA
FD977681       --> TGAAAGATA-CGAGATACTTATATATAGAGAGA---AA-GTAGGAGATTA
EY934462       --> TGAAAGATA-CGAGATACTTATATATAGAGAGA---AA-GTAGGAGATTA
FD941385       --> ..................................................
FD947617       --> ..................................................
FD548584       --> ..................................................
FD549450       --> ..................................................

               251    -    301
UN09778        --> CTGGTTTTGAAGCATTCTCTACGGCATGACGCCAAGATCCTTGAAGTAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444765       <-- ..................................................
FY438656       <-- ..................................................
FY440559       <-- ..................................................
FD563512       <-- ..................................................
FD561044       <-- ..................................................
FD982031       <-- ..................................................
FY449388       <-- ..................................................
FY428972       <-- ..................................................
FD547344       --> CTGGTTTTGAAGCATTCTCTACGGCATGACGCCAAGATCCTTGAAGTAAT
FD977681       --> CTGGTTTTGAAGCATTCTCTACGGCATGACGCCAAGATCCTTGAAGTAAT
EY934462       --> CTGGTTTTGAAGCATTCTCTACCGCATGACGCCTAGATCCTTGAAGTAAT
FD941385       --> ..................................................
FD947617       --> ..................................................
FD548584       --> ..................................................
FD549450       --> ..................................................

               301    -    351
UN09778        --> CATGCTCCAGGGCAGCTCTTGCGTTGATTCTTTTGCTTGGATCCATCAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444765       <-- .............................................TCAAC
FY438656       <-- ...............................................AAC
FY440559       <-- ..................................................
FD563512       <-- ..................................................
FD561044       <-- ..................................................
FD982031       <-- ..................................................
FY449388       <-- ..................................................
FY428972       <-- ..................................................
FD547344       --> CATGCTCCAGGGCAGCTCTTGCGTTGATTCTTTTGCTTGGATCCATCAAT
FD977681       --> CATGCTCCAGGGCAGCTCTTGCGTTGATTCTTTTGCTTGGATCCATCAAT
EY934462       --> CATGCTCCAGGGCAGCTCTTGCGTTGATTCTTTTGCTTGGATCCATCAAC
FD941385       --> ..................................................
FD947617       --> ..................................................
FD548584       --> ..................................................
FD549450       --> ..................................................

               351    -    401
UN09778        --> AGCATTTTAGAAAGGAGATCTATGCCATTAGGATCAAGGTTTGGGACAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444765       <-- AGCATTTTAGAAAGGAGATCTATGCCATTAGGATCAAGGTTTGGGACAAA
FY438656       <-- AGCATTTTAGAAAGGAGATCTATGCCATTAGGATCAAGGTT-GGGACAAA
FY440559       <-- ............AGGAGATCTATGCCATTAGGATCAAGGTT-GGGACAAA
FD563512       <-- ..................................................
FD561044       <-- ..................................................
FD982031       <-- ..................................................
FY449388       <-- ..................................................
FY428972       <-- ..................................................
FD547344       --> AGCATTTTAGAAAGGAGATCTATGCCATTAGGATCAAGGTTTGGGACAAA
FD977681       --> AGCATTTTAGAAAGGAGATCTATGCCATTAGGATCAAGGTTTGGGACAAA
EY934462       --> AGCATT............................................
FD941385       --> ..................................................
FD947617       --> ..................................................
FD548584       --> ..................................................
FD549450       --> ..................................................

               401    -    451
UN09778        --> AGATTCCAAGTCCGTTGGTTTCCATTTTGGGAAAGCAGATTTATAATCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444765       <-- AGATTCCAAGTCCGTTGGTTTCCATTTTGGGAAAGCAGATTTATAATCCG
FY438656       <-- AGATTCCAAGTCCGTTGGTTTCCATTTTGGGAAAGCAGATTTATAATCCG
FY440559       <-- AGATTCCAAGTCCGTTGGTTCCCATTTTGGGAAAGCAGATTTATAATCCG
FD563512       <-- ..................................................
FD561044       <-- ..................................................
FD982031       <-- ..................................................
FY449388       <-- ..................................................
FY428972       <-- ..................................................
FD547344       --> AGATTCCAAGTCCGTTGGTTTCCATTTTGGGAAAGCAGATTTATAATCCG
FD977681       --> AGATTCCAAGTCCGTTGGTTTCCATTTTGGGAAAGCAGATTTATAATCAG
EY934462       --> ..................................................
FD941385       --> ..................................................
FD947617       --> ..................................................
FD548584       --> ..................................................
FD549450       --> ..................................................

               451    -    501
UN09778        --> GAAGCGAAGTTACCCCTGGCCATGTATCCTCAGTTGGAGTTCCCATGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444765       <-- GAAGCGAAGTTACCCCTGGCCATGTATCCTCAGTTGGAGTTCCCATGATT
FY438656       <-- GAAGCGAAGTTACCCCTGGCCATGTATCCTCAGTTGGAGTTCCCATGATT
FY440559       <-- GAAGCGAAGTTACCCCTGGCCATGTATCCTCAGTTGGAGTTCCCATGATT
FD563512       <-- ....................CATGTATCCTCAGTTGGAGTTCCCATGATT
FD561044       <-- ........................TATCCTCAGTTGGAGTTCCCATGATT
FD982031       <-- ..................................................
FY449388       <-- ..................................................
FY428972       <-- ..................................................
FD547344       --> GAAGCGAAGTTACCCCTGGCCATGTATCCTCAGTTGGAGTTCCCATGATT
FD977681       --> GAAGCGAAGTTACCCCTGGCCATGTATCCTCAGTTGGAGTTCCCATGATT
EY934462       --> ..................................................
FD941385       --> ..................................................
FD947617       --> ..................................................
FD548584       --> ..................................................
FD549450       --> ..................................................

               501    -    551
UN09778        --> CTGAATATCTTGAAGAGTTGATCAATCTCGGAGTCTCCAGGAAACAAGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444765       <-- CTGAATATCTTGAAGAGTTGATCAATCTCGGAGTCTCCAGGAAACAAGGG
FY438656       <-- CTGAATATCTTGAAGAGTTGATCAATCTCGGAGTCTCCAGGAAACAAGGG
FY440559       <-- CTGAATATCTTGAAGAGTTGATCAATCTCGGAGTCTCCAGGAAACAAGGG
FD563512       <-- CTGAATATCTTGAAGAGTTGATCAATCTCGGAGTCTCCAGGAAACAAGGG
FD561044       <-- CTGAATATCT-GAAGAGTTGATCAATCTCGGAGTCTCCAGGAAACAAGGG
FD982031       <-- ...................GATCAATCTCGGAGTCTCCAGGAAACAGGGG
FY449388       <-- ..................................................
FY428972       <-- ..................................................
FD547344       --> CTGAATATCTTGAAGAGTTGATCAATCTCAGAGTCTCCAGGAAACAAGGG
FD977681       --> CTGAATATCTTGAAGAGTTGATCAATCTCGGAGTCTCCAGGAAACAGGGG
EY934462       --> ..................................................
FD941385       --> ..................................................
FD947617       --> ..................................................
FD548584       --> ..................................................
FD549450       --> ..................................................

               551    -    601
UN09778        --> CTTTTGGGTTATCATCTCCGCAAATATGCATCCCACAGACCAAATATCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444765       <-- CTTTTGGGTTATCATCTCCGCAAATATGCATCCCACAGACCAAATATCAA
FY438656       <-- CTTTTGGGTTATCATCTCCGCAAATATGCATCCCACAGACCAAATATCAA
FY440559       <-- CTTTTGGGTTATCATCTCCGCAAATATGCATCCCACAGACCAAATATCAA
FD563512       <-- CTTTTGGGTTATCATCTCCGCAAATATGCATCCCACAGACCAAATATCAA
FD561044       <-- CTTTTGGGTTATCATCTCCGCAAATATGCATCCCACAGACCAAATATCAA
FD982031       <-- CTTT-GGGTTATCATCTCCGCAAATATGCATCCCACAGACCAAATATCAA
FY449388       <-- .....GGGTTATCATCTCCGCAAATATGCATCCCACAGACCAAATATCAA
FY428972       <-- ..................................................
FD547344       --> CTTTTGGGTTATCATCTCCGCAAATATGCATCCCACAGACCAAATATCAA
FD977681       --> CTTTTGGGTTATCATCTCCGCAAATATGCATCCCACAGACCAAATATCAA
EY934462       --> ..................................................
FD941385       --> ..................................................
FD947617       --> ..................................................
FD548584       --> ..................................................
FD549450       --> ..................................................

               601    -    651
UN09778        --> CCGGTGTAGAGTAGTGATGAGACCCTAGGAGTATCTCTGGTGCTCGGTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444765       <-- CCGGTGTAGAGTAGTGATGAGACCCTAGGAGTATCTCTGGTGCTCGGTAC
FY438656       <-- CCGGTGTAGAGTAGTGATGAGACCCTAGGAGTATCTCTGGTGCTCGGTAC
FY440559       <-- CCGGTGTAGAGTAGTGATGAGACCCTAGGAGTATCTCTGGTGCTCGGTAC
FD563512       <-- CCGGTGTAGAGTAGTGATGAGACCCTAGGAGTATCTCTGGTGCTCGGTAC
FD561044       <-- CCGGTGTAGAGTAGTGATGAGACCCTAGGAGTATCTCTGGTGCTCGGTAC
FD982031       <-- CCGGTGTAGAGTAGTGATGAGACCCTAGGAGTATCTCTGGTGCTCGGTAC
FY449388       <-- CCGGTGTAGAGTAGTGATGAGACCCTAGGAGTATCTCTGGTGCTCGGTAC
FY428972       <-- ..................................................
FD547344       --> CCGGTGTAGAGTAGTGATGAGACCCTAGGAGTATCTCTGGTGCTCGGTAC
FD977681       --> CCGGTGTAGAGTAGTGATGAGACCCTAGGAGTATCTCTGGTGCTCGGTAC
EY934462       --> ..................................................
FD941385       --> ..................................................
FD947617       --> ..................................................
FD548584       --> ..................................................
FD549450       --> ..................................................

               651    -    701
UN09778        --> CAGAGAGTAACCACCTCATGAGTAAATGTCCTGACAGGGATACCGAATGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444765       <-- CAGAGAGTAACCACCTCATGAGTAAATGTCCTGACAGGGATACCGAATGC
FY438656       <-- CAGAGAGTAACCACCTCATGAGTAAATGTCCTGACAGGGATACCGAATGC
FY440559       <-- CAGAGAGTAACCACCTCATGAGTAAATGTCCTGACAGGGATACCGAATGC
FD563512       <-- CAGAGAGTAACCACCTCATGAGTAAATGTCCTGACAGGGATACCGAATGC
FD561044       <-- CAGAGAGTAACCACCTCATGAGTAAATGTCCTGACAGGGATACCGAATGC
FD982031       <-- CAGAGAGTAACCACCTCATGAGTAAATGTCCTGACAGGGATACCGAATGC
FY449388       <-- CAGAGAGTAACCACCTCATGAGTAAATGTCCTGACAGGGATACCGAATGC
FY428972       <-- ..................................................
FD547344       --> CAGAGAGTAACCACCTCATGAGTAAATGTCCTGACAGGGATACCGAATGC
FD977681       --> CAGAGAGTAACCACCTCATGAGTAAATGTCCTGACAGGGATACCGAATGC
EY934462       --> ..................................................
FD941385       --> ..................................................
FD947617       --> ..................................................
FD548584       --> ..................................................
FD549450       --> ..................................................

               701    -    751
UN09778        --> TCTGGCCAGTCCAAAATCTGCAAGCTTAAGTGAGTTGGTGCGGCGATCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444765       <-- TCTGGCCAGTCCAAAATCTGCAAGCTTAAGTGAGTTGGTGCGGCGATCAA
FY438656       <-- TCTGGCCAGTCCAAAATCTGCAAGCTTAAGTGAGTTGGTGCGGCGATCAA
FY440559       <-- TCTGGCCAGTCCAAAATCTGCAAGCTTAAGTGAGTTGGTGCGGCGATCAA
FD563512       <-- TCTGGCCAGTCCAAAATCTGCAAGCTTAAGTGAGTTGGTGCGGCGATCAA
FD561044       <-- TCTGGCCAGTCCAAAATCTGCAAGCTTAAGTGAGTTGGTGCGGCGATCAA
FD982031       <-- TCTGGCCAGTCCAAAATCTGCAAGCTTAAGTGAGTTGGTGCGGCGATCAA
FY449388       <-- TCTGGCCAGTCCAAAATCTGCAAGCTTAAGTGAGTTGGTGCGGCGATCAA
FY428972       <-- ..................................................
FD547344       --> TCTGGCGAGTCCAAAATCTGCAAGCTTAAGTGAGT-GGTGCGGCGATCAA
FD977681       --> TCTGGCCAGTCCAAAATCTGCAAGCTTAAGTGAGTTGGTGCGGCGATCAA
EY934462       --> ..................................................
FD941385       --> ..................................................
FD947617       --> ..................................................
FD548584       --> ..................................................
FD549450       --> ..................................................

               751    -    801
UN09778        --> TCAACAGATTCTGTGGCTTGAGGTCACGGTGGAGAACCCTGTGAGAGTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444765       <-- TCAACAGATTCTGTGGCTTGAGGTCACGGTGGAGAACCCTGTGAGAGTGG  Raphanus sativus cv GSK3-1
FY438656       <-- TCAACAGATTCTGTGGCTTGAGGTCACGGTGGAGAACCCTGTGAGAGTGG  Raphanus sativus cv GSK3-1
FY440559       <-- TCAACAGATTCTGTGGCTTGAGGTCACGGTGGAGAACCCTGTGAGAGTGG  Raphanus sativus cv GSK3-1
FD563512       <-- TCAACAGATTCTGTGGCTTCAGGTCACGGTGGAGAACCCTGTGAGAGTGG  Raphanus sativus var. oleiformis
FD561044       <-- TCAACAGATTCTGTGGCTTCAGGTCACGGTGGAGAACCCTGTGAGAGTGG  Raphanus sativus var. oleiformis
FD982031       <-- TCAACAGATTCTGTGGCTTCAGGTCACGATGGAGAACCCTGTGAGAGTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FY449388       <-- TCAACAGATTCTGTGGCTTGAGGTCACGGTGGAGAACCCTGTGAGAGTGG  Raphanus sativus cv GSK3-1
FY428972       <-- ..................................................  Raphanus sativus cv GSK3-1
FD547344       --> T.................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD977681       --> TCAACAGATTCTGTGGCTTCAGGTCACGATGGAGA-CCCTGTGAGAGTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY934462       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD941385       --> ..................................................  Raphanus sativus var. oleiformis
FD947617       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD548584       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD549450       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               801    -    851
UN09778        --> CAATACGCTATTCCACGGAGAATCTGGTAAACATACCTTTTGATCATATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444765       <-- CAATACGCTATTCCACGGAGAATCTGGTAAACATACCTTTTGATCATATG
FY438656       <-- CAATACGCTATTCCACGGAGAATCTGGTAAACATACCTTTTGATCATATG
FY440559       <-- CAATACGCTATTCCACGGAGAATCTGGTAAACATACCTTTTGATCATATG
FD563512       <-- CAATACGCTATTCCACGGAGAATCTGATAAACATACCTTTTGATCATATG
FD561044       <-- CAATACGCTATTCCACGGAGAATCTGATAAACATACCTTTTGATCATATG
FD982031       <-- CAATACGCTATTCCACGGAGAATCTGGTAAACATACCTTTTGATCATATG
FY449388       <-- CAATACGCTATTCCACGGAGAATCTGGTAAACATACCTTTTGATCATATG
FY428972       <-- .......................CTGGTAAACAT-CCTTTTGATCATATG
FD547344       --> ..................................................
FD977681       --> CAATACGCTATTCCACGGAGAATCT.........................
EY934462       --> ..................................................
FD941385       --> ..................................................
FD947617       --> ..................................................
FD548584       --> ..................................................
FD549450       --> ..................................................

               851    -    901
UN09778        --> AAGATCCTTGGAGAAATCAGGAGAAGAGTCCATGTGCTTTTTGAGATCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444765       <-- AAGATCCTTGGAGAAATCAGGAGAAGAGTCCATGTGCTTTTTGAGATCCA
FY438656       <-- AAGATCCTTGGAGAAATCAGGAGAAGAGTCCATGTGCTTTTTGAGATCCA
FY440559       <-- AAGATCCTTGGAGAAATCAGGAGAAGAGTCCATGTGCTTTTTGAGATCCA
FD563512       <-- AAGATCCTTGGAGAAATCAGGAGAAGAGTCCATGTGCTTATTGAGATCCA
FD561044       <-- AAGATCCTTGGAGAAATCAGGAGAAGAGTCCATGTGCTTTTTGAGATCCA
FD982031       <-- AAGATCCTTGGAGAAATCAGGAGAAGAGTCCATGTGCTTTTTGAGATCCA
FY449388       <-- AAGATCCTTGGAGAAATCAGGAGAAGAGTCCATGTGCTTTTTGAGATCCA
FY428972       <-- AAGATCCTTGGAGAAATCAGGAGAAGAGTCCATGTGCTTTTTGAGATCCA
FD547344       --> ..................................................
FD977681       --> ..................................................
EY934462       --> ..................................................
FD941385       --> ..................................................
FD947617       --> ..................................................
FD548584       --> ..................................................
FD549450       --> ..................................................

               901    -    951
UN09778        --> AGTCAAGATACTCGAAAACCAGATACAAACGCTTCTCGCTGTGCACTACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444765       <-- AGTCAAGATACTCGAAAACCAGATACAAACGCTTCTCGCTGTGCACTACA
FY438656       <-- AGTCAAGATACTCGAAAACCAGATACAAACGCTTCTCGCTGTGCACTACA
FY440559       <-- AGTCAAGATACTCGAAAACCAGATACAAACGCTTCTCGCTGTGCACTACA
FD563512       <-- GGTCAAGATACTCGAAAACCAGATACAAACGCTTCTCGCTGTGCACTACA
FD561044       <-- GGTCAAGATACTCGAAAACCAGATACAAACGCTTCTCGCTGTGCACTACA
FD982031       <-- AGTCAAGATACTCGAAAACCAGATACAAACGCTTCTCGCTGTGCACTACA
FY449388       <-- AGTCAAGATACTCGAAAACCAGATACAAACGCTTCTCGCTGTGCACTACA
FY428972       <-- AGTCAAGATACTCGAAAACCAGATACAAACGCTTCTCGCTGTGCACTACA
FD547344       --> ..................................................
FD977681       --> ..................................................
EY934462       --> ..................................................
FD941385       --> ..................................................
FD947617       --> ..................................................
FD548584       --> ..................................................
FD549450       --> ..................................................

               951    -   1001
UN09778        --> TCCTGCAACTTGACAATGTTGCTGTGCTGCATTTCTTTCAAAAGAGAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444765       <-- TCCTGCAACTTGACAATGTTGCTGTGCTGCATTTCTTTCAAAAGAGAGAT
FY438656       <-- TCCTGCAACTTGACAATGTTGCTGTGCTGCATTTCTTTCAAAAGAGAGAT
FY440559       <-- TCCTGCAACTTGACAATGTTGCTGTGCTGCATTTCTTTCAAAAGAGAGAT
FD563512       <-- TCCTGCAACTTGACAATGTTGCTGTGCTGCATTTCTTTCAAAAGAGAGAT
FD561044       <-- TCCTGCAACTTGACAATGTTGCTGTGCTGCATTTCTTTCAAAAGAGAGAT
FD982031       <-- TCCTGCAACTTGACAATGTTGCTGTGCTGCATTTCTTTCAAAAGAGAGAT
FY449388       <-- TCCTGCAACTTGACAATGTTGCTGTGCTGCATTTCTTTCAAAAGAGAGAT
FY428972       <-- TCCTGCAACTTGACAATGTTGCTGTGCTGCATTTCTTTCAAAAGAGAGAT
FD547344       --> ..................................................
FD977681       --> ..................................................
EY934462       --> ..................................................
FD941385       --> ..................................................
FD947617       --> ..................................................
FD548584       --> ..................................................
FD549450       --> ..................................................

               1001   -   1051
UN09778        --> TTCTCTAATGGCAGTGCTGGGGACACCTTCATCCTCCTGCTCGAGGCGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444765       <-- TTCTCTAATGGCAGTGCTGGGGACACCTTCATCCTCCTGCTCGAGGCGGA
FY438656       <-- TTCTCTAATGGCAGTGCTGGGGACACCTTCATCCTCCTGCTCGAGGCGGA
FY440559       <-- TTCTCTAATGGCAGTGCTGGGGACACCTTCATCCTCCTGCTCGAGGCGGA
FD563512       <-- TTCTCTAATGGCGGTGCTGGGGACACCTTCATCCTCCTGCTCGAGGCGGA
FD561044       <-- TTCTCTAATGGCGGTGCTGGAGACACCTTCATCCTCCTGCTCGAGGCGGA
FD982031       <-- TTCTCTAATGGCAGTGCTGGGGACACCTTCATCCTCCTGCTCGAGTCGGA
FY449388       <-- TTCTCTAATGGCAGTGCTGGGGACACCTTCATCCTCCTGCTCGAGGCGGA
FY428972       <-- TTCTCTAATGGCAGTGCTGGGGACACCTTCATCCTCCTGCTCGAGGCGGA
FD547344       --> ..................................................
FD977681       --> ..................................................
EY934462       --> ..................................................
FD941385       --> ..................................................
FD947617       --> ..................................................
FD548584       --> ..................................................
FD549450       --> ..................................................

               1051   -   1101
UN09778        --> TCTTCTTCAAAGCGATAGTCTCGTTGGTGACTTTGTCTCGTGCCTTGTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444765       <-- TCTTCTTCAAAGCGATAGTCTCGTTGGTGACTTTGTCTCGTGCCTTGTAC
FY438656       <-- TCTTCTTCAAAGCGATAGTCTCGTTGGTGACTTTGTCTCGTGCCTTGTAC
FY440559       <-- TCTTCTTCAAAGCGATAGTCTCGTTGGTGACTTTGTCTCGTGCCTTGTAC
FD563512       <-- TCTTCTTCAAAGCGATAGTCTCGTTGGTGACTTTGTCTCGTGCCTTGTAC
FD561044       <-- TCTTCTTCAAAGCGATAGTCTCGTTGGTGACTTTGTCTCGTGCCTTGTAC
FD982031       <-- TCTTCTTCAAAGCGATAGTCTCGTTGGTGACTTTGTCTCGTGCCTTGTAC
FY449388       <-- TCTTCTTCAAAGCGATAGTCTCGTTGGTGACTTTGTCTCGTGCCTTGTAC
FY428972       <-- TCTTCTTCAAAGCGATAGTCTCGTTGGTGACTTTGTCTCGTGCCTTGTAC
FD547344       --> ..................................................
FD977681       --> ..................................................
EY934462       --> ..................................................
FD941385       --> ..................................................
FD947617       --> ..................................................
FD548584       --> ..................................................
FD549450       --> ..................................................

               1101   -   1151
UN09778        --> ACAACACCGTAAGTTCCTTCACCGATCTTCTCAACTTTCTCGTACTGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444765       <-- ACAACACCGTAAGTTCCTTCACCGATCTTCTCAACTTTCTCGTACTGATC
FY438656       <-- ACAACACCGTAAGTTCCTTCACCGATCTTCTCAACTTTCTCGTACTGATC
FY440559       <-- ACAACACCGTAAGTTCCTTCACCGATCTTCTCAACTTTCTCGTACTGATC
FD563512       <-- ACAACACCGTAAGTTCCTTCACCGATCTTCTCAACTTTCTCGTACTGATC
FD561044       <-- ACAACACCGTAAGTTCCTTCACCGATCTTCTCAACTTTCTCGTACTGATC
FD982031       <-- ACAACACCGTAAGTTCCTTCACCGATCTTCTCAA................
FY449388       <-- ACAACACCGTAAGTTCCTTCACCGATCTTCTCAACTTTCTCGTACTGATC
FY428972       <-- ACAACACCGTAAGTTCCTTCACCGATCTTCTCAACTTTCTCGTACTGATC
FD547344       --> ..................................................
FD977681       --> ..................................................
EY934462       --> ..................................................
FD941385       --> ..................................................
FD947617       --> ..................................................
FD548584       --> ..................................................
FD549450       --> ..................................................

               1151   -   1201
UN09778        --> CATCCCTTTAAACTAGGCTGAAAGCAACACGAATCAC-GGGGACGATCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444765       <-- CATCCCTTTAAACTAGGCTGAAAGCAACACGAATCAC-GGGGACGATCGG
FY438656       <-- CATCCCTTTAAACTAGGCTGAAAGCAACACGAATCAC-GGGGACGATCGG
FY440559       <-- CATCCCTTTAAACTAGGCTGAAAGCAACACGAATCAC-GGGGACGATCGG
FD563512       <-- CATCCCTTTAAACTAGGCTGAAAGCAACACGAATCACCGGGGACGATCGG
FD561044       <-- CATCCCTTTAAACTAGGCTGAAAGCAACACGAATCACCGGGGACGATCGG
FD982031       <-- ..................................................
FY449388       <-- CATCCCTTTAAACTAGGCTGAAAGCAACACGAATCAC-GGGGACGATCGG
FY428972       <-- CATCCCTTTAAACTAGGCTGAAAGCAACACGAATCAC-GGGGACGATCGG
FD547344       --> ..................................................
FD977681       --> ..................................................
EY934462       --> ..................................................
FD941385       --> ..................................................
FD947617       --> ..................................................
FD548584       --> ..................................................
FD549450       --> ..................................................

               1201   -   1251
UN09778        --> ATGTAGTGATAGCGAGTGAGACAGCCGACGGATCCTCACTCTCTGGATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444765       <-- ATGTAGTGATAACGAGTGAGACAGCCGACGGATCC...............
FY438656       <-- ATGTAGTGATAGCGAGTGAGACAGCCGAC.....................
FY440559       <-- ATGTAGTGATAGCGAGTGAGACAGCCGAC.....................
FD563512       <-- ATGTAGTGATAGCGAGTGAGACAGCCGACGGATCCTCc............
FD561044       <-- ATGTAGTGATAGCGAGTGAGACAGCCGACGGATCCcc.............
FD982031       <-- ..................................................
FY449388       <-- ATGTAGTGATAGCGAGTGAGACAGCCGACGGATCCTCACTCTCTGGATAA
FY428972       <-- ATGTAGTGATAGCGAGTGAGACAGCCGACGGATCCTCACTCTC.......
FD547344       --> ..................................................
FD977681       --> ..................................................
EY934462       --> ..................................................
FD941385       --> ........................................gggaattcac
FD947617       --> ............................................gggaat
FD548584       --> ..................................................
FD549450       --> ..................................................

               1251   -   1301
UN09778        --> AAAGGCAGAATATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444765       <-- ..................................................
FY438656       <-- ..................................................
FY440559       <-- ..................................................
FD563512       <-- ..................................................
FD561044       <-- ..................................................
FD982031       <-- ..................................................
FY449388       <-- AAAGGCAGAATATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
FY428972       <-- ..................................................
FD547344       --> ..................................................
FD977681       --> ..................................................
EY934462       --> ..................................................
FD941385       --> aggagagagagagAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
FD947617       --> tcacaggagagagAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
FD548584       --> .............gGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
FD549450       --> ...........gggGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA

               1301   -   1351
UN09778        --> GAGAGAGAAGGAAGGATGGGTGGAGGAATGGAGACGAACAAGAACAAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444765       <-- ..................................................
FY438656       <-- ..................................................
FY440559       <-- ..................................................
FD563512       <-- ..................................................
FD561044       <-- ..................................................
FD982031       <-- ..................................................
FY449388       <-- GAGAGAGAgagggt....................................
FY428972       <-- ..................................................
FD547344       --> ..................................................
FD977681       --> ..................................................
EY934462       --> ..................................................
FD941385       --> GAGAGAGAAGGAAGGATGGGTGGAGGAATGGAGACGAACAAGAACAAGTT
FD947617       --> GAGAGAGAAGGAAGGATGGGTGGAGGAATGGAGACGAACAAGAACAAGTT
FD548584       --> GAGAGAGAAGGAATGATGGGTGGAGGAATGGAGACGAACAAGAACAAGTT
FD549450       --> GAGAGAGAAGGAAGGATGGGTGGAGGAATGGAGACGAACAAGAACAAGTT

               1351   -   1401
UN09778        --> CATAGAGGATTGGGGATCCGCGAGGGAGAATCTGGAGCATAACTTCCGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444765       <-- ..................................................
FY438656       <-- ..................................................
FY440559       <-- ..................................................
FD563512       <-- ..................................................
FD561044       <-- ..................................................
FD982031       <-- ..................................................
FY449388       <-- ..................................................
FY428972       <-- ..................................................
FD547344       --> ..................................................
FD977681       --> ..................................................
EY934462       --> ..................................................
FD941385       --> CATAGAGGATTGGGGATCCGCGAGGGAGAATCTGGAGCATAACTTCCGAT
FD947617       --> CATAGAGGATTGGGGATCCGCGAGGGAGAATCTGGAGCATAACTTCCGAT
FD548584       --> CATAGAGGATTGGGGATCCGCGAGGGAGAATCTGGAGCATAACTTCCGAT
FD549450       --> CATAGAGGATTGGGGATCCGCGAGGGAGAATCTGGAGCATAACTTCCGAT

               1401   -   1451
UN09778        --> GGACACGTCGCAACTTCGCTCTCATCGGCATCTTCGGCATCGCCCTCCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444765       <-- ..................................................
FY438656       <-- ..................................................
FY440559       <-- ..................................................
FD563512       <-- ..................................................
FD561044       <-- ..................................................
FD982031       <-- ..................................................
FY449388       <-- ..................................................
FY428972       <-- ..................................................
FD547344       --> ..................................................
FD977681       --> ..................................................
EY934462       --> ..................................................
FD941385       --> GGACACGTCGCAACTTCGCTCTCATCGGCATCTTCGGCATCGCCCTCCCC
FD947617       --> GGACACGTCGCAACTTCGCTCTCATCGGCATCTTCGGCATCGCCCTCCCC
FD548584       --> GGACACGTCGCAACTTCGCTCTCATCGGCATCTTCGGCATCGCCCTCCCC
FD549450       --> GGACACGTCGCAACTTCGCTCTCATCGGCATCTTCGGCATCGCCCTCCCC

               1451   -   1501
UN09778        --> ATCCTCGTCTACAAGGGCATCGTCAAAGACTTCCATATGCAAGACGAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444765       <-- ..................................................
FY438656       <-- ..................................................
FY440559       <-- ..................................................
FD563512       <-- ..................................................
FD561044       <-- ..................................................
FD982031       <-- ..................................................
FY449388       <-- ..................................................
FY428972       <-- ..................................................
FD547344       --> ..................................................
FD977681       --> ..................................................
EY934462       --> ..................................................
FD941385       --> ATCCTCGTCTACAAGGGCATCGTCAAAGACTTCCATATGCAAGACGAAGA
FD947617       --> ATCCTCGTCTACAAGGGCATCGTCAAAGACTTCCATATGCAAGACGAAGA
FD548584       --> ATCCTCGTCTACAAGGGCATCGTCAAAGACTTCCATATGCAAGACGAAGA
FD549450       --> ATCCTCGTCTACAAGGGCATCGTCAAAGACTTCCAGATGCAAGACGAAGA

               1501   -   1551
UN09778        --> TGCTGGCAGACCACATAGAAAGTTCCTCTGAGGTTTCTTTGCAAGCAACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444765       <-- ..................................................
FY438656       <-- ..................................................
FY440559       <-- ..................................................
FD563512       <-- ..................................................
FD561044       <-- ..................................................
FD982031       <-- ..................................................
FY449388       <-- ..................................................
FY428972       <-- ..................................................
FD547344       --> ..................................................
FD977681       --> ..................................................
EY934462       --> ..................................................
FD941385       --> TGCTGGCAGACCACATAGAAAGTTCCTCTGAGGTTTCTTTGCAAGCAACT
FD947617       --> TGCTGGCAGACCACATAGAAAGTTCCTCTGAGGTTTCTTTGCAAGCAACT
FD548584       --> TGCTGGCAGACCACATAGAAAGTTCCTCTGAGGTTTCTTTGCAAGCAACT
FD549450       --> TGCTGGCAGACCACATAGAAAGTTCCTCTGAGGTTTCTTTGCAAGCAACT

               1551   -   1601
UN09778        --> ACACTCTCTTCTTCATAAAGTCTCAGCAGTGTGAAATTTTCAAGAAGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444765       <-- ..................................................
FY438656       <-- ..................................................
FY440559       <-- ..................................................
FD563512       <-- ..................................................
FD561044       <-- ..................................................
FD982031       <-- ..................................................
FY449388       <-- ..................................................
FY428972       <-- ..................................................
FD547344       --> ..................................................
FD977681       --> ..................................................
EY934462       --> ..................................................
FD941385       --> ACACTCTCTTCTTCATAAAGTCTCAGCAGTGTGAAATTTTCAAGAAGCTG
FD947617       --> ACACTCTCTTCTTCATAAAGTCTCAGCAGTGTGAAATTTTCAAGAAGCTG
FD548584       --> ACACTCTCTTCTTCATAAAGTCTCAGCAGTGTGAAATTTTCAAGAAGCTG
FD549450       --> ACACTCTCTTCTTCATAAAGTCTCAGCAGTGTGAAATTTTCAAGAAGCTG

               1601   -   1651
UN09778        --> ATTGCTACAACTCTCCTCTCCTTTTTTTTTTTTTGCATTGTATTCAGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444765       <-- ..................................................
FY438656       <-- ..................................................
FY440559       <-- ..................................................
FD563512       <-- ..................................................
FD561044       <-- ..................................................
FD982031       <-- ..................................................
FY449388       <-- ..................................................
FY428972       <-- ..................................................
FD547344       --> ..................................................
FD977681       --> ..................................................
EY934462       --> ..................................................
FD941385       --> ATTGCTACAACTCTCCTCTCCTTTTTTTTTTTTTGCATTGTATTCAGAAT
FD947617       --> ATTGCTACAACTCTCCTCTCCTTTTTTTTTTTTTGCATTGTATTCAGAAT
FD548584       --> ATTGCTACAACTCTCCTCTCCTTTTTTTTTTT--GCATTGTATTCAGAAT
FD549450       --> ATTGCTACAACTCTCCTCTCCTTTTTTTTTTTT-GCATTGTATTCAGAAT

               1651   -   1701
UN09778        --> AAAAGAATAACATCTCAATGATTATAACTTCTGTTTTGTAAAAGTTTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444765       <-- ..................................................
FY438656       <-- ..................................................
FY440559       <-- ..................................................
FD563512       <-- ..................................................
FD561044       <-- ..................................................
FD982031       <-- ..................................................
FY449388       <-- ..................................................
FY428972       <-- ..................................................
FD547344       --> ..................................................
FD977681       --> ..................................................
EY934462       --> ..................................................
FD941385       --> AAAAGAATAACATCTCAATGATTATAACTTCCGTTTTGTAAAAGTTTGTT
FD947617       --> AAAAGAATAACATCTCAATGATTATAACTTCTGTTTTGTAAAAGTTTGTT
FD548584       --> AAAAGAATAACATCTCAATGATTATAACTTCTGTTTTGTAAAAGTTTGTT
FD549450       --> AAAAGAATAACATCTCAATGATTATAACTTCTGTTTTGTAAAAGTTTGTT

               1701   -   1751
UN09778        --> TTTAGTTTTGACATATTACTTTTGAGCTCAAGTTTAGCATCTTGCAGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444765       <-- ..................................................
FY438656       <-- ..................................................
FY440559       <-- ..................................................
FD563512       <-- ..................................................
FD561044       <-- ..................................................
FD982031       <-- ..................................................
FY449388       <-- ..................................................
FY428972       <-- ..................................................
FD547344       --> ..................................................
FD977681       --> ..................................................
EY934462       --> ..................................................
FD941385       --> TTTAGTTTTGACATATTACTTTTGAGCTCAAGTTTAGCATCTTGCAGGAT
FD947617       --> TTTAGTTTTGACATATTACTTTTGAGCTCAAGTTTAGCATCTTGCAGGAT
FD548584       --> TTTAGTTTTGACATATTACTTTTGAGCTCAAGTTTAGCATCTTGCAGGAT
FD549450       --> TTTAGTTTTGACATATTACTTTTGAGCTCcc...................

               1751   -   1801
UN09778        --> TTTAACATTTTGTAAGTGGGTGACAACTTTTGAGCCACACCAAAGGAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY444765       <-- ..................................................
FY438656       <-- ..................................................
FY440559       <-- ..................................................
FD563512       <-- ..................................................
FD561044       <-- ..................................................
FD982031       <-- ..................................................
FY449388       <-- ..................................................
FY428972       <-- ..................................................
FD547344       --> ..................................................
FD977681       --> ..................................................
EY934462       --> ..................................................
FD941385       --> TTT...............................................
FD947617       --> TTTAACATTTTGTAAGTGGGTGACAACTTTTGAGCCACACCAAAGGAAAA
FD548584       --> TTTAACATTTTGTAAGTGGGTGACAACTTTTGAGCCACACCAAA......
FD549450       --> ..................................................

               1801   -   1851
UN09778        --> A
                   ~
FY444765       <-- .
FY438656       <-- .
FY440559       <-- .
FD563512       <-- .
FD561044       <-- .
FD982031       <-- .
FY449388       <-- .
FY428972       <-- .
FD547344       --> .
FD977681       --> .
EY934462       --> .
FD941385       --> .
FD947617       --> A
FD548584       --> .
FD549450       --> .