Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN09788

               -1     -     49
UN09788        --> ..GGGGGTTCTCCGCCACACTAATCTCTCAGGAAGAGGAGCGAGCAGCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718929       <-- ..................................................
FD986107       <-- ..................................................
FD984596       <-- ..................................................
EY925839       <-- ..................................................
FD984807       <-- ..................................................
EY895269       <-- ..................................................
EW714775       --> tgGGGGGTTCTCCGCCACACTAATCTCTCTGGAAGAGGAGCGAGCAGCCA
EY929393       --> ..GGGGGTTCTCCGCCACACTAATCTCTCAGGAAGAGGAGCGAGCAGCCA
EY899519       --> ....GGGTTCTCCGCCACACTAATCTCTCAGGAAGAGGAGCGTGCAGCCA
FD940819       --> ....GGGTTCTCCGCCACACTAATCTCTCAGGAAGAGGAGCGAGCAGCCA
EY899298       --> ...........ggGCCACACTAATCTCTCAGGAAGAGGAGCGAGCAGCCA
FD988727       --> ..............ggACACTAATCTCCCAGGAAGAGGAGCGAGCAGCCA

               49     -     99
UN09788        --> AAAAAAAAAAAA---GGAGGAAATGGTAGCGCTGAAGCAACAGAAGCGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718929       <-- ...........A---GGAGGAAATGGTAGCGCTGAAGCAACAGAAGCGGC
FD986107       <-- ..........................TAGCGCTGAAGCAACAGAATCGGC
FD984596       <-- ..................................................
EY925839       <-- ..................................................
FD984807       <-- ..................................................
EY895269       <-- ..................................................
EW714775       --> AAAAAAAAAAAA--AGGAGGAAATGGTAGCGCTGAAGCAACAGAAGCGGC
EY929393       --> AAAAAAAA-------GGAGGAAATGGTAGCGCTGAAGCAACAGAAGCGGC
EY899519       --> AAAAAAAAAAA----GGAGGGAATGGTAGCGCTGAAGCAACAGAAACGGC
FD940819       --> AAAAAAAAAAA----GGAGGAAATGGTAGCGCTGAAGCAACAGAAGCGGC
EY899298       --> AAAAAAAAAAAA---GGAGGAAATGGTAGCGCTGAAGCAACAGAAGCGGC
FD988727       --> AAAAAAAAAAAAAAAGGAGGAAATGGTAGCGCTGAAGCAACAGAAGCGGC

               99     -    149
UN09788        --> TCGCCGCATCGGTGATGAAGTGCGGGAAGGGCAAAGTTTGGCTCGATCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718929       <-- TCGCCGCATCGGTGATGAAGTGCGGGAAGGGCAAAGTTTGGCTCGATCCA
FD986107       <-- TCGCCGCATCGGTGATGAAGTGCGGGAAGGGCAAAGTTTGGCTCGATCCG
FD984596       <-- .CGCCGCATCGGTGATGAAGTGCGGGAAGGGCAAAGTTTGGCTCGATCCA
EY925839       <-- ..................................................
FD984807       <-- ..................................................
EY895269       <-- ..................................................
EW714775       --> TCGCCGCATCGGTGATGAAGTGCGGGAAGGGCAAAGTTTGGCTCGATCCA
EY929393       --> TCGCCGCATCGGTGATGAAGTGCGGGAAGGGCAAAGTTTGGCTCGATCCA
EY899519       --> TCGCCGCATCGGTGATGAAGTGCGGGAAGGGCAAAGTTTGGCTCGATCCA
FD940819       --> TCGCCGCATCGGTGATGAAGTGCGGGAAGGGCAAAGTTTGGCTCGATCCA
EY899298       --> TCGCCGCATCGGTGATGAAGTGCGGGAAGGGCAAAGTTTGGCTCGATCCA
FD988727       --> TCGCCGCATCGGTGATGAAGTGCGGGAAGGGCAAAGTTTGGCTCGATCCA

               149    -    199
UN09788        --> AATGAAACCGCCGATATCTCCATGGCTAACTCCCGCCAAAACATCAGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718929       <-- AATGAAACCGCCGATATCTCCATGGCTAACTCCCGCCAAAACATCAGGAA
FD986107       <-- AATGAAACCGCCGATATCTCCATGGCCAACTCCCGCCAAAACATCAGGAA
FD984596       <-- AATGAAACCGCCGATATCTCCATGGCCAACTCCCGCCAAAACATCAGGAA
EY925839       <-- ..................................................
FD984807       <-- ..................................................
EY895269       <-- ..................................................
EW714775       --> AATGAAACCGCCGATATCTCCATGGCTAACTCCCGCCAAAACATCAGGAA
EY929393       --> AATGAAACCGCCGATATCTCCATGGCTAACTCCCGCCAAAACATCAGGAA
EY899519       --> AATGAAACCGCCGATATCTCCATGGCTAACTCCCGCCAAAACATCAGGAA
FD940819       --> AATAAAACCGCCGATATCTCCATGGCTAACTCCCGCCAAAACATCAGGAA
EY899298       --> AATGAAACCGCCGATATCTCCATGGCTAACTCCCGCCAAAACATCAGGAA
FD988727       --> AATGAAACCGCCGATATCTCCATGGCCAACTCCCGCCAAAACATCAGGAA

               199    -    249
UN09788        --> GTTGGTGAATGATGGTTTCATTATCAAGAAGCCAACCAAGATCCACTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718929       <-- GTTGGTGAATGATGGTTTCATTATCAAGAAGCCAACCAAGATCCACTCTC
FD986107       <-- GTTGGTGAATGATGGTTTCATTATCAAGAAGCCAACCAAGATCCACTCTC
FD984596       <-- GTTGGTGAATGATGGTTTCATTATCAAGAAGCCAACCAAGATCCACTCTC
EY925839       <-- ................................................TC
FD984807       <-- ..................................................
EY895269       <-- ..................................................
EW714775       --> GTTGGTGAATGATGGTTTCATTATCAAGAAGCCAACCAAGATCCACTCTC
EY929393       --> GTTGGTGAATGATGGTTTCATTATCAAGAAGCCAACCAAGATCCACTCTC
EY899519       --> GTTGGTGAATGATGGTTTCATTATCAAGAAGCCAACCAAGATCCACTCTC
FD940819       --> GTTGGTGAATGATGGTTTCATTATCAAGAAGCCAACCAAGATCCACTCTC
EY899298       --> GTTGGTGAATGATGGTTTCATTATCAAGAAGCCAACCAAGATCCACTCTC
FD988727       --> GTTGGTGAATGATGGTTTCATTATCAAGAAGCCAACCAAGATCCACTCTC

               249    -    299
UN09788        --> GCTCCCGGGCCCGCCGCATGAAGATTGCCAAGATGAAGGGTCGTCACTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718929       <-- GCTCCCGGGCCCGCCGCATGAAGATTGCCAAGATGAAGGGTCGTCACTCT
FD986107       <-- GCTCCCGGGCCCGCCGCATGAAGATTGCCAAGATGAAGGGTCGTCACTCT
FD984596       <-- GCTCCCGGGCCCGCCGCATGAAGATTGCCAAGATGAAGGGTCGTCACTCT
EY925839       <-- GCTCCCGGGCCCGCCGCATGAAGATTGCCAAGATGAAGGGTCGTCACTCT
FD984807       <-- ..................................................
EY895269       <-- ..................................................
EW714775       --> GCTCCCGGGCCCGCCGCATGAAGATTGCCAAGATGAAGGGTCGTCACTCT
EY929393       --> GCTCCCGGGCCCGCCGCATGAAGATTGCCAAGATGAAGGGTCGTCACTCT
EY899519       --> GCTCCCGGGCCCGCCGCATGAAGATTGCCAAGATGAAGGGTCGTCACTCT
FD940819       --> GCTCCCGGGCCCGCCGCATGAAGATTGCCAAGATGAAGGGTCGTCACTCT
EY899298       --> GCTCCCGGGCCCGCCGCATGAAGATTGCCAAGATGAAGGGTCGTCACTCT
FD988727       --> GCTCCCGGGCCCGCCGCATGAAGATTGCCAAGATGAAGGGTCGTCACTCT

               299    -    349
UN09788        --> GGATATGGTAAGAGGAAGGGTACGCGTGAGGCTAGGTTGCCAACAAAGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718929       <-- GGATATGGTAAGAGGAAGGGTACGCGTGAGGCTAGGTTGCCAACAAAGGT
FD986107       <-- GGATATGGTAAGAGGAAGGGTACGCGTGAAGCTAGGTTGCCAACAAAGGT
FD984596       <-- GGATATGGTAAGAGGAAGGGTACGCGTGAAGCTAGGTTGCCAACAAAGGT
EY925839       <-- GGATATGGTAAGAGGAAGGGTACGCGTGAGGCTAGGTTGCCAACAAAGGT
FD984807       <-- ..................................................
EY895269       <-- ..................................................
EW714775       --> GGATATGGTAAGAGGAAGGGTACGCGTGAGGCTAGGTTGCCAACAAAGGT
EY929393       --> GGATATGGTAAGAGGAAGGGTACGCGTGAGGCTAGGTTGCCAACAAAGGT
EY899519       --> GGATATGGTAAGAGGAAGGGTACGCGTGAGGCTAGGTTGCCAACAAAGGT
FD940819       --> GGATATGGTAAGAGGAAGGGTACGCGTGAGGCTAGGTTGCCAACAAAGGT
EY899298       --> GGATATGGTAAGAGGAAGGGTACGCGTGAGGCTAGGTTGCCAACAAAGGT
FD988727       --> GGATATGGTAAGAGGAAGGGTACGCGTGAAGCTAGGTTGCCAACAAAGGT

               349    -    399
UN09788        --> ACTGTGGATGCGTAGGATGCGTGTGCTAAGGCGTCTCCTGAAGAAGTACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718929       <-- ACTGTGGATGCGTAGGATGCGTGTGTTAAGGCGTCTCCTGAAGAAGTACA
FD986107       <-- ACTGTGGATGCGCAGGATGCGTGTGTTAAGGCGTCTCCTGAAGAAGTACA
FD984596       <-- ACTGTGGATGCGCAGGATGCGTGTGCTAAGGCGTCTCCTGAAGAAGTACA
EY925839       <-- ACTGTGGATGCGTAGGATGCGTGTGCTAAGGCGTCTCCTGAAGAAGTACA
FD984807       <-- ...........................AAGGCGTCTCCTGAAGAAGTACA
EY895269       <-- .....................................CTGAAGAAGTACA
EW714775       --> ACTGTGGATGCGTAGGATGCGTGTGCTAAGGCGTCTCCTGAAGAAGTACA
EY929393       --> ACTGTGGATGCGTAGGATGCGTGTGCTAAGGCGTCTCCTGAAGAAGTACA
EY899519       --> ACTGTGGATGCGTAGGATGCGTGTGCTAAGGCGTCTCCTGAAGAAGTACA
FD940819       --> ACTGTGGATGCGTAGGATGCGTGTGCTAAGGCGTCTCCTGAAGAAGTACA
EY899298       --> ACTGTGGATGCGTAGGATGCGTGTGCTAAGGCGTCTCCTGAAGAAGTACA
FD988727       --> ACTGTGGATGCGCAGGATGCGTGTGCTAAGGCGTCTCCTGAAGAAGTACA

               399    -    449
UN09788        --> GAGAGTCGAAGAAGATTGACAAGCACATGTACCACGACATGTACATGCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718929       <-- GAGAGTCGAAGAAGATTGACAAGCACATGTACCACGACATGTACATGCGT
FD986107       <-- GAGAGTCGAAGAAGATTGACAAGCACATGTACCACGACATGTACATGCGT
FD984596       <-- GAGAGTCGAAGAAGATTGACAAGCACATGTACCACGACATGTACATGCGT
EY925839       <-- GAGAGTCGAAGAAGATTGACAAGCACATGTACCACGACATGTACATGCGT
FD984807       <-- GAGAGTCGAAGAAGATTGACAAGCACATGTACCACGACATGTACACGCGT
EY895269       <-- GAGAGTCGAAGAAGATTGACAAGCACATGTACCACGACATGTACATGCGT
EW714775       --> GAGAGTCGAAGAAGATTGACAAGCACATGTACCACGACATGTACATGCGT
EY929393       --> GAGAGTCGAAGAAGATTGACAAGCACATGTACCACGACATGTACATGCGT
EY899519       --> GAGAGTCGAAGAAGATTGACAAGCACATGTACCACGACATGTACATGCGT
FD940819       --> GAGAGTCGAAGAAGATTGACAAGCACATGTACCACGACATGTACATGCGT
EY899298       --> GAGAGTCGAAGAAGATTGACAAGCACATGTACCACGACATGTACATGCGT
FD988727       --> GAGAGTCGAAGAAGATTGACAAGCACATGTACCACGACATGTACATGCGT

               449    -    499
UN09788        --> GTCAAGGGTAACGTGTTCAAGAACAAGCGTGTCTTGATGGAGAGCATCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718929       <-- GTCAAGGGTAACGTGTTCAAGAACAAGCGTGTCTTGATGGAGAGCATCCA  Raphanus sativus var. oleiformis
FD986107       <-- GTTAAGGGTAACGTGTTCAAGAACAAGCGTGTTTTGATGGAGAGCATCCA  Raphanus raphanistrum subsp. landra
FD984596       <-- GTTAAGGGTAACGTGTTCAAGAACAAGCGTGTTTTGATGGAGAGCATCCA  Raphanus raphanistrum subsp. landra
EY925839       <-- GTCAAGGGTAACGTGTTCAAGAACAAGCGTGTCTTGATGGAGAGCATCCA  Raphanus sativus var. oleiformis
FD984807       <-- GTTAAGGGTAACGTGTTCAAGAACAAGCGTGTTTTGATGGAGAGCATCCA  Raphanus raphanistrum subsp. landra
EY895269       <-- GTCAAGGGTAACGTGTTCAAGAACAAGCGTGTCTTGATGGAGAGCATCCA  Raphanus raphanistrum subsp. maritimus
EW714775       --> GTCAAGGGTAACGTGTTCAAGAACAAGCGTGTCTTGATGGAGAGCATCCA  Raphanus sativus var. oleiformis
EY929393       --> GTCAAGGGTAACGTGTTCAAGAACAAGCGTGTCTTGATGGAGAGCATCCA  Raphanus sativus var. oleiformis
EY899519       --> GTCAAGGGTAACGTGTTCAAGAACAAGCGTGTCTTGATGGAGAGCATCCA  Raphanus raphanistrum subsp. maritimus
FD940819       --> GTCAAGGGTAACGTGTTCAAGAACAAGCGTGTCTTGATGGAGAGCATCCA  Raphanus sativus var. oleiformis
EY899298       --> GTCAAGGGTAACGTGTTCAAGAACAAGCGTGTCTTGATGGAGAGCATCCA  Raphanus raphanistrum subsp. maritimus
FD988727       --> GTTAAGGGTAACGTGTTCAAGAACAAGCGTGTTTTGATGGAGAGCATCCA  Raphanus raphanistrum subsp. landra

               499    -    549
UN09788        --> CAAGTCCAAGGCCGAGAAAGCCAGAGAGAAGACTTTGTCTGATCAGTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718929       <-- CAAGTCCAAGGCCGAGAAAGCCAGAGAGAAGACTTTGTCTGATCAGTTTG
FD986107       <-- CAAGTCCAAGGCCGAGAAAGCCAGAGAGAAGACTTTGTCTGATCAGTTTG
FD984596       <-- CAAGTCCAAGGCCGAGAAAGCCAGAGAGAAGACTTTGTCTGATCAGTTTG
EY925839       <-- CAAGTCCAAGGCCGAGAAAGCCAGAGAGAAGACTTTGTCTGATCAGTTTG
FD984807       <-- CAAGTCCAAGGCCGAGAAAGCCAGAGAGAAGACTTTGTCTGATCAGTTTG
EY895269       <-- CAAGTCCAAGGCCGAGAAAGCCAGAGAGGAGACTTTGTCTGATCAGTTTG
EW714775       --> CAAGTCCAAGGCCGAGAAAGCCAGAGAGAAGACTTTGTCTGATCAGTTTG
EY929393       --> CAAGTCCAAGGCCGAGAAAGCCAGAGAGAAGACTTTGTCTGATCAGTTTG
EY899519       --> CAAGTCCAAGGCCGAGAAAGCCAGAGAGGAGACTT...............
FD940819       --> CAAGTCCAAGGCCGAGAAAGCCAGAGAGAAGACTTTGTCTGATCAGTTTG
EY899298       --> CAAGTCCAAGGCCGAGAAAGCCAGAGAGAAGACTTTGTCTGATCAGTTTG
FD988727       --> CAAGTCCAAGGCCGAGAAAGCCAGAGAGAAGACTTTGTCTGATCAGTTTG

               549    -    599
UN09788        --> AGGCTAAGAGGGCTAAGAACAAGGCTAGCCGAGAAAGGAAACATGCTAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718929       <-- AGGCTAAGAGGGCTAAGAACAAGGCTAGCCGAGAAAGGAAACATGCTAGG
FD986107       <-- AGGCTAAGAGGGCTAAGAACAAGGCTAGCCGAGAAAGGAAACATGCTAGG
FD984596       <-- AGGCTAAGAGGGCTAAGAACAAGGCTAGCCGAGAAAGGAAACATGCTAGG
EY925839       <-- AGGCTAAGAGAGCTAAGAACAAGGCTAGCCGAGAAAGGAAACATGCTAGG
FD984807       <-- AGGCTAAGAGGGCTAAGAACAAGGCTAGCCGAGAAAGGAAACATGCTAGG
EY895269       <-- AGGCTAAGAGGGCTAAGAACAAGGCTAGCCGTGAAAGGAAACATGCTAGG
EW714775       --> AGGCTAAGAGGGCTAAGAACAAGGCTAGCCGAGAAAGGAAACATGCTAGG
EY929393       --> AGGCTAAGAGAGCTAAGAACAAGGCTAGCCGAGAAAGGAAACATGCTAGG
EY899519       --> ..................................................
FD940819       --> AGGCTAAGAGGGCTAAG.................................
EY899298       --> AGGCTAAGAGGGCTAAGAACAAGGCTAGCCGTGAAAGGAAACATGCTAGG
FD988727       --> AGGCTAAGAGGGCTAAGAACAAGGCTAGCCGAGAAAGGAAACATGCTAGG

               599    -    649
UN09788        --> AGAGAAGAGCGTCTTGCTAAGGGTCCTGG-TGGAGATGTCGAGCCTGCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718929       <-- AGAGAAGAGCGTCTTGCTAAGGGTCCTGG-TGGAGATGTCGAGCCTGCGA
FD986107       <-- AGAGAAGAGCGTCTTGCTAAGGGTCCTGG-TGGAGATGTCGAGCCTGCGA
FD984596       <-- AGAGAAGAGCGTCTTGCTAAGGGTCCTGG-TGGAGATGTCGAGCCTGCGA
EY925839       <-- AGAGAAGAGCGTCTTGCTAAGGGTCCTGG-TGGAGATGTCGAGCCTGCGA
FD984807       <-- AGAGAAGAGCGTCTTGCTAAGGGTCCTGG-TGGAGATGTCGAGCCTGCGA
EY895269       <-- AGAGAAGAGCGTCTCGCTAAGGGTCCTGG-TGGAGATGTCGAGCCTGCGA
EW714775       --> AGAGAAGAGCGTCTTGCTAAGGGTCCTGG-TGGAGATGTCGAGCCTGCGA
EY929393       --> AGAGAAGAGCGTCTTG..................................
EY899519       --> ..................................................
FD940819       --> ..................................................
EY899298       --> AGAGAAGAGCGTCTCGCTAAGGGTCCTGG-TGGAGATGTCGAGCCTGCGA
FD988727       --> AGAGAAGAGCGTCTTGCTAAGGGTCCTGGGTGGAGATGTCGAGCCTGCGA

               649    -    699
UN09788        --> CTGCACCACCAGCTGCTGCTGCTGCTACTACTGCTCAAACCGCAGAGGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718929       <-- CTGCACCACCAGCTGCTGCTGCTGCTACTACTGCTCAAACCGCAGAGGTA
FD986107       <-- CTGCACCACCAGCTGCTGCTGCTGCTACTACTGCTCAAACCGCAGAGGTA
FD984596       <-- CTGCACCACCAGCTGCTGCTGCTGCTACTACTGCTCAAACCGCAGAGGTA
EY925839       <-- CTGCACCACCAGCTGCTGCTGCTGCTACTACTGCTCAAACCGCAGAGGTA
FD984807       <-- CTGCACCCCCAGCTGCTGCTGCTGCTACTACTGCTCAAACCGCAGAGGTA
EY895269       <-- CTGCACCACCAGCTGCTGCTGCTGCTACTACTGCTCAAACCGCAGATGTA
EW714775       --> CTGCACCACCAGCTGCTGCTGCTGCTACTACTGCTCAAACCGCAGAGGTA
EY929393       --> ..................................................
EY899519       --> ..................................................
FD940819       --> ..................................................
EY899298       --> CTGCACCACCAGCTGCTGCTGCTGCTACTACTGCTCAAc...........
FD988727       --> CTGCACCACCAGCTGCTGCTGCTGCTACTACTGCTCAA-CCGCAGAGGTA

               699    -    749
UN09788        --> CCGAAGAAGAAGTCTAAGAAGTGAAGAGGATAGTCATCAAGCCTCAGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718929       <-- CCGAAGAAGAAGTTTAAGAAGTGAAGAGGATAGTCATCAAGCCTCAGTTC  Raphanus sativus var. oleiformis
FD986107       <-- CCGAAGAAGAAGTCTAAAAAGTGAAGAGGATAGTCATCAAGCCTCAGTTC  Raphanus raphanistrum subsp. landra
FD984596       <-- CCGAAGAAGAAGTCTAAAAAGTGAAGAGGATAGTCATCAAGCCTCAGTTC  Raphanus raphanistrum subsp. landra
EY925839       <-- CCAAAGAAGAAGTCTAAGAAGTGAAGAGGATAGTCATCAAGCCTCAGTTC  Raphanus sativus var. oleiformis
FD984807       <-- CCGAAGAAGAAGTCTAAAAAGTGAAGAGGATAGTCATCAAGCCTCAGTTC  Raphanus raphanistrum subsp. landra
EY895269       <-- CCGAAGAAGAAGTCTAAGAAGTGAAGAGGATAGTCATCAAGCCTCAGTTC  Raphanus raphanistrum subsp. maritimus
EW714775       --> CCGAAGAAGAAGTCTAAGAAGTGAAGAGGATAGTCATCAAGCCTCAGTTC  Raphanus sativus var. oleiformis
EY929393       --> ..................................................  Raphanus sativus var. oleiformis
EY899519       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD940819       --> ..................................................  Raphanus sativus var. oleiformis
EY899298       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD988727       --> C.................................................  Raphanus raphanistrum subsp. landra

               749    -    799
UN09788        --> ATTTTACTTGACTTGGAAGAAGTTTTTTGAATGTTTTATGAAGTTGCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718929       <-- ATTTTACTTGACTTGGAAGAAGTTTTTTGAATGTTTTATGAAGTTGCTTT  Raphanus sativus var. oleiformis
FD986107       <-- ATTT-CCTTGACTTGGAAGAAGTTTTTTGGATGTTTTATGAAGTTGCTTT  Raphanus raphanistrum subsp. landra
FD984596       <-- ATTT-CCTTGACTTGGAAGAAGTTTTTTGAATGTTTTATGAAGTTGCTTT  Raphanus raphanistrum subsp. landra
EY925839       <-- ATTTTACTTGACTTGGAAGAAGTTTTTTGAATGTTTTATGAAGTTGCTTT  Raphanus sativus var. oleiformis
FD984807       <-- ATTT-CCTTGACTTGGAAGAAGTTTTTTGAATGTTTTATGAAGTTGCTTT  Raphanus raphanistrum subsp. landra
EY895269       <-- ATTT-ACTTGACTTG-AAGAAGTTTTTTGAATGTTTTATGAAGTTGCTTT  Raphanus raphanistrum subsp. maritimus
EW714775       --> ATTTTACTTGACTTGGA.................................  Raphanus sativus var. oleiformis
EY929393       --> ..................................................  Raphanus sativus var. oleiformis
EY899519       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD940819       --> ..................................................  Raphanus sativus var. oleiformis
EY899298       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD988727       --> ..................................................  Raphanus raphanistrum subsp. landra

               799    -    849
UN09788        --> TGTTGAAATACTTTCTTGGCGCAGAAAAACATAATTGTTATGCTTTTAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718929       <-- TGTTGAAATACTTTCTTGGCGCAGAAAAACATAATTGTTATGCTTTTAAG  Raphanus sativus var. oleiformis
FD986107       <-- TGTTGAAATACTTTCTTGGCGCAGAAAAACACAATTGTTATGCTTTTAAG  Raphanus raphanistrum subsp. landra
FD984596       <-- TGTTGAAATACTTTCTTGGCGCAGAAAAACACAATTGTTATGCTTTTAAG  Raphanus raphanistrum subsp. landra
EY925839       <-- TGTTGAAATACTTTCTTGGCGCAGAAAAACATAATTGTTATGCTTTTAAG  Raphanus sativus var. oleiformis
FD984807       <-- TGTTGAAATACTTTCTTGGCGCAGAAAAACACAATTGTTATGCTTTTAAG  Raphanus raphanistrum subsp. landra
EY895269       <-- TGTTGAAATACTTTCTTGGCTCAGAAAAACATAATTGTTATGCTTTTAAA  Raphanus raphanistrum subsp. maritimus
EW714775       --> ..................................................  Raphanus sativus var. oleiformis
EY929393       --> ..................................................  Raphanus sativus var. oleiformis
EY899519       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD940819       --> ..................................................  Raphanus sativus var. oleiformis
EY899298       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD988727       --> ..................................................  Raphanus raphanistrum subsp. landra

               849    -    899
UN09788        --> GATTTTTTTAGCTTATCAGTTTACTTTCTTTTTCGAGACATTTTGTTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718929       <-- GATTTTTT-AGCTTATCAGTTTACTTcc......................  Raphanus sativus var. oleiformis
FD986107       <-- GATTTTTTTAGCTTTTCAGTTTACTTTCTTTTTCGAGgc...........  Raphanus raphanistrum subsp. landra
FD984596       <-- GATTTTTTTAGCTc....................................  Raphanus raphanistrum subsp. landra
EY925839       <-- GATTTTTT-AGCTTATCAGTTTACTTTCTTTTTCGAGACATTTTGTTCTC  Raphanus sativus var. oleiformis
FD984807       <-- GATTTTTTTAGCTTTTCAGTTT............................  Raphanus raphanistrum subsp. landra
EY895269       <-- GATTTTTT-AGCTTATCAGTTTACTTTCTTTT-CGAGAC...........  Raphanus raphanistrum subsp. maritimus
EW714775       --> ..................................................  Raphanus sativus var. oleiformis
EY929393       --> ..................................................  Raphanus sativus var. oleiformis
EY899519       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD940819       --> ..................................................  Raphanus sativus var. oleiformis
EY899298       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD988727       --> ..................................................  Raphanus raphanistrum subsp. landra

               899    -    949
UN09788        --> CATTCCTTTCTGAATGGTTTTTGTTATTCACTTAATCTAATCCACCGACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW718929       <-- ..................................................
FD986107       <-- ..................................................
FD984596       <-- ..................................................
EY925839       <-- CATTCCTTTCTGAATGGTTTTTGTTATTCACTTAATCTAATCCACCGACA
FD984807       <-- ..................................................
EY895269       <-- ..................................................
EW714775       --> ..................................................
EY929393       --> ..................................................
EY899519       --> ..................................................
FD940819       --> ..................................................
EY899298       --> ..................................................
FD988727       --> ..................................................

               949    -    999
UN09788        --> CATGAATTTGAC
                   ~~~~~~~~~~~~
EW718929       <-- ............
FD986107       <-- ............
FD984596       <-- ............
EY925839       <-- CATGAATTTGAC
FD984807       <-- ............
EY895269       <-- ............
EW714775       --> ............
EY929393       --> ............
EY899519       --> ............
FD940819       --> ............
EY899298       --> ............
FD988727       --> ............