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Alignment for radish unigene UN09829

               1      -     51
UN09829        --> GGGAAAGAGAAGAGAAAGTGAGAGAGATTCGAGTTCCGATCAAAAGGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752176       <-- ..................................................
FD941432       --> GGGAAAGAGAAGAGAAAGTGAGAGAGATTCGAGTTCCGATCAAAAGGAGA
EX747459       --> ....ggGAGAAGAGAAAGTGAGAGAGATTCGAGTTCCGATCAAAAGGAGA
EX894487       --> ............gGAAAGTGAGAGAGATTCGAGTTCCGATCAAAAGGAGA
FD949721       --> ............gGAAAGTGAGAGAGATTCGAGTTCCGATCAAAAGGAGA
EV565399       --> ..............ggAGTGAGAGAGATTCGAGTTCCGATCAAAAGGAGA
EY932584       --> .................ggGAGAGAGATTCGAGTTCCGATCAAAAGGAGA
EX770697       --> ..................................................
EV565400       --> ..................................................
EX748152       --> ..................................................
FD989255       --> ..................................................

               51     -    101
UN09829        --> TCTGCATTGAATCTCAGATTGTAGTAATCCTTGGGAGAGATCTGATTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752176       <-- ..................................................
FD941432       --> TCTGCATTGAATCTCAGATTGTAGTAATCCTTGGGAGAGATCTGATTCTC
EX747459       --> TCTGCATTGAATCTCAGATTGTAGTAATCCTTGGGAGAGATCTGATTCTC
EX894487       --> TCTGCATTGAATCTCAGATTGTAGTAATCCTTGGGAGAGATCTGATTCTC
FD949721       --> TCTGCATTGAATCTCAGATTGTAGTAATCCTTGGGAGAGATCTGATTCTC
EV565399       --> TCTGCATTGAATCTCAGATTGTAGTAATCCTTGGGAGAGATCTGATTCTC
EY932584       --> TCTGCATTGAATCTCAGATTGTAGTAATCCTTGGGAGAGATCTGATTCTC
EX770697       --> ..............................ggGGGAGAGATCTGATTCTC
EV565400       --> ..................................................
EX748152       --> ..................................................
FD989255       --> ..................................................

               101    -    151
UN09829        --> TCCTGATTTCCGTTTCCATGGCGATTCGGCGGTCGAAGCTATGCATCGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752176       <-- ..................................................
FD941432       --> TCCTGATTTCCGTTTCCATGGCGACTCGGCGGTCGAAGCTATGCATCGTA
EX747459       --> TCCTGATTTCCGTTTCCATGGCGATTCGGCGGTCGAAGCTATGCATCGTA
EX894487       --> TCCTGATTTCCGTTTCCATGGCGATTCGGCGGTCGAAGCTATGCATCGTA
FD949721       --> TCCTGATTTCCGTTTCCATGGCGATTCGGCGGTCGAAGCTATGCATCGTA
EV565399       --> TCCTGATTTCCGTTTCCATGGCGATTCGGCGGTCGAAGCTATGCATCGTA
EY932584       --> TCCTGATTTCCGTTTCCATGGCGACTCGGCGGTCGAAGCTATGCATCGTA
EX770697       --> TCCTGATTTCCGTTTCCATGGCGATTCGGCGGTCGAAGCTATGCATCGTA
EV565400       --> ..................................................
EX748152       --> ..................................................
FD989255       --> ..................................................

               151    -    201
UN09829        --> TTGTTGTTCGCGCTCTCTTACGTCATCTTCGTCTTCGCCGGGAAGAGTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752176       <-- ..................................................
FD941432       --> TTGTTGTTCGCGCTCTCTTACGTCATCTGCGTCTTCGCAGGGAAGAGCTA
EX747459       --> TTGTTGTTCGCGCTCTCTTACGTCATCTTCGTCTTCGCCGGGAAGAGTTA
EX894487       --> TTGTTGTTCGCGCTCTCTTACTTCATCTTCGTCTTCGCCGGGAAGAGTTA
FD949721       --> TTGTTGTTCGCGCTCTCTTACGTCATCTTCGTCTTCGCCGGGAAGAGTTA
EV565399       --> TTGTTGTTCGCGCTCTCTTACGTCATCTTCGTCTTCGCCGGGAAGAGTTA
EY932584       --> TTGTTGTTCGCGCTCTCTTACGTCATCTGCGTCTTCGCAGGGAAGAGCTA
EX770697       --> TTGTTGTTCGCGCTCTCTTACGTCATCTTCGTCTTCGCCGGGAAGAGTTA
EV565400       --> ..................................................
EX748152       --> ..................................................
FD989255       --> ..................................................

               201    -    251
UN09829        --> CTACGATGTGTTGCAAGTGCCGAAAGGTGCGTCTGATGAACAGATTAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752176       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD941432       --> CTACGATGTGTTGCAAGTGCCGAAAGGTGCGTCTGATGAACAGATTAAGA  Raphanus sativus var. oleiformis
EX747459       --> CTACGATGTGTTGCAAGTGCCGAAAGGTGCGTCGGATGAACAGATTAAGA  Raphanus raphanistrum subsp. maritimus
EX894487       --> CTACGATGCGTTGCAAGTGCCGAAAGGTGCGTCTGATGAACAGATTAAGA  Raphanus sativus cv Early Scarlet Globe
FD949721       --> CTACGATGTGTTGCAAGTGCCGAAAGGTGCGTCTGATGAACAGATTAAGA  Raphanus sativus cv Early Scarlet Globe
EV565399       --> CTACGATGTGTTGCAAGTGCCGAAAGGTGCGTCGGATGAACAGATTAAGA  Raphanus raphanistrum subsp. landra
EY932584       --> CTACGATGTGTTGCAAGTGCCGAAAGGTGCGTCTGATGAACAGATTAAGA  Raphanus sativus var. oleiformis
EX770697       --> CTATGATGTGTTGCAAGTGCCGAAAGGTGCGTCGGATGAACAGATTAAGA  Raphanus raphanistrum subsp. landra
EV565400       --> ..................................................  Raphanus raphanistrum subsp. landra
EX748152       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD989255       --> ..................................................  Raphanus raphanistrum subsp. landra

               251    -    301
UN09829        --> GAGCTTACAGGAAACTCGCTTTGAAGTATCATCCCGATAAGAATCAGGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752176       <-- ..................................................
FD941432       --> GAGCTTACAGGAAACTCGCTTTGAAGTATCATCCCGATAAGAATCAGGGC
EX747459       --> GAGCTTACAGGAAACTCGCTTTGAAGTATCATCCCGATAAGAATCAGGGC
EX894487       --> GAGCTTACAGGAAACTCGCTTTGAAGTATCATCCCGATAAGAATCAGGGC
FD949721       --> GAGCTTACAGGAAACTCGCTTTGAAGCATCATCCCGATAAGAATCAGGGC
EV565399       --> GAGCTTACAGGAAACTCGCTTTGAAGTATCATCCCGATAAAAATCAGGGC
EY932584       --> GAGCTTACAGGAAACTCGCTTTGAAGTATCATCCCGATAAGAATCAGGGC
EX770697       --> GAGCTTACAGGAAACTCGCTTTGAAGTATCATCCCGATAAGAATCAGGGC
EV565400       --> ..................................................
EX748152       --> ..................................................
FD989255       --> ..................................................

               301    -    351
UN09829        --> AACGAAGAAGCCACTCGCAAATTCGCTGAGATCAACAACGCTTATGAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752176       <-- ..................................................
FD941432       --> AACTAAGAAGCTACTCGCAAATTCGCTGAGATCAACAACGCTTATGAAGT
EX747459       --> AACGAAGAAGCCACTCGCAAATTCGCTGAGATCAACAACGCTTATGAAGT
EX894487       --> AACGAAGAAGCCACTCGCAAATTCGCTGAGATCAACAACGCTTATGAAGT
FD949721       --> AACGAAGAAGCCACTCGCAAATTCGCTGAGATCAACAACGCTTATGAAGT
EV565399       --> AACGAAGAAGCCACTCGCAAATTCGCTGAGATCAACAACGCTTATGAAGT
EY932584       --> AACGAAGAAGCTACTCGCAAATTCGCTGAGATCAACAACGCTTATGAAGT
EX770697       --> AACGAAGAAGCCACTCGCAAATTCGCTGAGATCAACAACGCTTATGAAGT
EV565400       --> .................................AACAACGCTTATGAAGT
EX748152       --> ..................................................
FD989255       --> ..................................................

               351    -    401
UN09829        --> GCTATCGGATGAGGAGAAGAGGGAGATATATAACAGATATGGTGAAGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752176       <-- ..................................................
FD941432       --> GCTATCGGATGAGGAGAAGAGGGAGATATATAACAGATATGGTGAAGAAG
EX747459       --> GCTATCGGATGAGGAGAAGAGGGAGATATATAACAGATATGGTGAAGAAG
EX894487       --> GCTATCGGATGAGGAGAAGAGGGAGATTTATAACAGATATGGTGAAGAAG
FD949721       --> GCTATCGGATGAGGAGAAGAGGGAGATTTATAACAGATATGGTGAAGAAG
EV565399       --> GCTATCGGATGAGGAGAAGAGGGAGATATATAACAGATATGGTGAAGGAG
EY932584       --> GCTATCGGATGAGGAGAAGAGGGAGATATATAACACATATGGTGAAGAAG
EX770697       --> GCTATCGGATGAGGAGAAGAGGGAGATATATAACAGATATGGTGAAGAAG
EV565400       --> GCTATCGGATGAGGAGAAGAGGGAGATATATAACAGATATGGTGAAGAAG
EX748152       --> ..................................................
FD989255       --> ..................................................

               401    -    451
UN09829        --> GGCTCAAACAGCATGCTGCTAATGGTGGACGTGGTGGTGGTGGAGGGGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752176       <-- ..................................................
FD941432       --> GGCTCAAACAGCATGCTGCTAATGGTGGACGTGGTGGTGGTGG---GGGC
EX747459       --> GGCTCAAACAGCATGCTGCTAATGGTGGACGTGGTGGTGGTGGAGGGGGC
EX894487       --> GGCTCAAACAGCATGCTGCTAATGGTGGACGTGGTGGTGGTGGAGGGGGC
FD949721       --> GGCTCAAACAGCATGCTGCTAATGGTGGACGTGGTGGTGGTGGAGGGGGC
EV565399       --> GGCTCAAACAGCATGCTGCTAATGGTGG......................
EY932584       --> GGCTCA............................................
EX770697       --> GGCTCAAACAGCATGCTGCTAATGGTGGACGTGGTGGTGGTGGAGGGGGC
EV565400       --> GGCTCAAACAGCATGCTGCTAATGGTGGACGTGGTGGTGGTGGAGGGGGC
EX748152       --> ..................................................
FD989255       --> ..................................................

               451    -    501
UN09829        --> ATGAATATGCAAGACATCTTTAGCCAGTTTTTTGGTGGTGGTGGTTCGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752176       <-- ..................................................
FD941432       --> ATGAATATGCAGGACATCTTTAGCCAGTTTTTTGGTGGTGGTGGTTCGAT
EX747459       --> ATGAATATGCAAGACATCTTTAGCCAGTTTTTTGGTGGTGGTGGTTCGAT
EX894487       --> ATGAATATGCAAGACATCTTTAGCCAGTTTTTTGGTGGTGGTGGTTCGAT
FD949721       --> ATGAATATGCAAGACATCTTTAGCCAGTTTTTTGGTGGTGGTGGTTCGAT
EV565399       --> ..................................................
EY932584       --> ..................................................
EX770697       --> ATGAATATGCAAGACATCTCTAGCCAGTTTTTTGGTGGTGGTGGTTCGAT
EV565400       --> ATGAATATGCAAGACATCTTTAGCCAGTTTTTTGGTGGTGGTGGTTCGAT
EX748152       --> ..................................................
FD989255       --> ..................................................

               501    -    551
UN09829        --> GGAGGAAGAAGAGAAGGTTGTTAAGGGTGATGACGTGATTGTGGAACTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752176       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD941432       --> GGAGGAAGAAGAGAAGGTTGTCAAGGGTGATGACGTGATTGTCGAACTTG  Raphanus sativus var. oleiformis
EX747459       --> GGAGGAAGAAGAGAAGGTTGTTAAGGGTGATGACGTGATTGTGGAACTTG  Raphanus raphanistrum subsp. maritimus
EX894487       --> GGAGGAAGAAGAGAAGGTTGTCAAGGGTGATGACGTGATTGTCGAACTTG  Raphanus sativus cv Early Scarlet Globe
FD949721       --> GGAGGAAGAAGAGAAGGTTGTCAAGGGTGATGACGTGATTGTCGAACTTG  Raphanus sativus cv Early Scarlet Globe
EV565399       --> ..................................................  Raphanus raphanistrum subsp. landra
EY932584       --> ..................................................  Raphanus sativus var. oleiformis
EX770697       --> GGAGGAAGGAGAGAAGGTTGTTAAGGGTAATGACGTGATTGTGGAACTTG  Raphanus raphanistrum subsp. landra
EV565400       --> GGAGGAAGAAGAGAAGGTTGTTGAGGGTGATGACGTGATTGTGGAGCTTG  Raphanus raphanistrum subsp. landra
EX748152       --> ...............................GACGTGATTGTGGAACTTG  Raphanus raphanistrum subsp. maritimus
FD989255       --> ..................................................  Raphanus raphanistrum subsp. landra

               551    -    601
UN09829        --> AGGCCACTCTAGAAGATTTATACATGGGAGGCTCTATGAAGGTATGGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752176       <-- ..................................................
FD941432       --> AGGCCACTCTAGAAGATTTATACATGGGAGGCTCTATGAAGGTATGGAGG
EX747459       --> AGGCCACTCTAGAAGGTTTATACATGGGAGGCTCTATGAAGGTATGGAGG
EX894487       --> AGGCCACTCTAGAAGATTTATACATGGGAGGCTCTATGAAGGTATGGAGG
FD949721       --> AGGCCACTCTAGAAGATTTATACATGGGAGGCTCTATGAAGGTATGGAGG
EV565399       --> ..................................................
EY932584       --> ..................................................
EX770697       --> AGGCCACTCTAGAAGATTTATACATGGGAGGCTCTATGAAGGTATGGAGG
EV565400       --> AGGCCACTCTAGAAGATTTATACATGGGAGGCTCTATGAAGGTATGGAGG
EX748152       --> AGGCCACTCTCGAAGATTTATACATGGGAGGCTCTATGAAGGTATGGAGG
FD989255       --> ..................................................

               601    -    651
UN09829        --> GAGAAGAATGTAATAAAACCAGCTCCTGGAAAGAGAAATTGCAACTGCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752176       <-- .......................................TGCAACTGCAG  Raphanus raphanistrum subsp. maritimus
FD941432       --> GAGAAGAATGTAATAAAACCAGCTCCTGGAAAGAGAAATTGCAACTGCAG  Raphanus sativus var. oleiformis
EX747459       --> GAGAAGAATGTAATAAAACCAGCTCCTGGAAAGAGAAATTGCAACTGCAG  Raphanus raphanistrum subsp. maritimus
EX894487       --> GAGAAGAATGTAATAAAACCAGCTCCTGGAAAGAGAAATTGCAACTGCAG  Raphanus sativus cv Early Scarlet Globe
FD949721       --> GAGAAGAATGTAATAAAACCAGCTCCTGGAAAGAGAAATTGCAACTGCAG  Raphanus sativus cv Early Scarlet Globe
EV565399       --> ..................................................  Raphanus raphanistrum subsp. landra
EY932584       --> ..................................................  Raphanus sativus var. oleiformis
EX770697       --> GAGAAGAATGTAATAAAACCAGCCCCTGGAAAGAGAAATTGCAACTGCAG  Raphanus raphanistrum subsp. landra
EV565400       --> GAGAAGAATGTAATAAAACCAGCTCCTGGAAAGAGAAATTGCAACTGCAG  Raphanus raphanistrum subsp. landra
EX748152       --> GAGAAGAATGTAATAAAACCAGCTCCTGGAAAGAGAAATTGCAACTGCAG  Raphanus raphanistrum subsp. maritimus
FD989255       --> ..................................................  Raphanus raphanistrum subsp. landra

               651    -    701
UN09829        --> GGATGAGGTTTATCACAGGCAAATTGGTCCTGG-AATGTTCCAACAGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752176       <-- GGATGAGGTTTATCACAAGCAAATTGGTCCTGG-AATGTTCCAACAGATG  Raphanus raphanistrum subsp. maritimus
FD941432       --> AGATGAGGTTTATCACAGGCAAATTGGCCCTGG-AATGTTTCAACAGATG  Raphanus sativus var. oleiformis
EX747459       --> G.................................................  Raphanus raphanistrum subsp. maritimus
EX894487       --> AGATGAG-TTTATC....................................  Raphanus sativus cv Early Scarlet Globe
FD949721       --> AGATGAG-TTTATC....................................  Raphanus sativus cv Early Scarlet Globe
EV565399       --> ..................................................  Raphanus raphanistrum subsp. landra
EY932584       --> ..................................................  Raphanus sativus var. oleiformis
EX770697       --> GGATGAAGTTTATCACAGGCAAATTGGTCCTGG-AATGCTCCAACAGATG  Raphanus raphanistrum subsp. landra
EV565400       --> GGATGAAGTTTATCACAGGCAAATTGGTCCTGGGAATGTTC.........  Raphanus raphanistrum subsp. landra
EX748152       --> GGATGAGGTTTATCACAAGCAAATTGGTCCTGG-AATGTTCCAACAGATG  Raphanus raphanistrum subsp. maritimus
FD989255       --> .............CACAGGCAAATTGGTCCTGG-AATGTTCCAACAGATG  Raphanus raphanistrum subsp. landra

               701    -    751
UN09829        --> ACAGAGCAGGTCTGTGACAAATGCCCAAATGTTAAGTTCGAACGCGAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752176       <-- ACAGAGCAGGTCTGTGACAAATGCCCAAATGTTAAGTTCGAACGCGAAGG
FD941432       --> ACAGAGCAG-TCTGTGACAAATGCCCAAATGTTAAGTTCGAACGCGAAGG
EX747459       --> ..................................................
EX894487       --> ..................................................
FD949721       --> ..................................................
EV565399       --> ..................................................
EY932584       --> ..................................................
EX770697       --> ACAGAGCAG-TCTGTGACAAATGCCCAAATGTTAAGTTCGAACGTGAAAG
EV565400       --> ..................................................
EX748152       --> ACAGAGCAGGTCTGTGACAAATGCCCAAATGTTAAGTTCGAACGCGAAGG
FD989255       --> ACAGAGCAGGTCTGTGACAAATGCCCAAATGTTAAGTTCGAACGCGAAGG

               751    -    801
UN09829        --> ATACTTTGTCACAGTTGATATCGAGAAAGGAATGAAAGACGGAGAAGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752176       <-- ATACTTTGTCACAGTTGATATCGAGAAAGGAATGAAAGACGGAGAAGAAG
FD941432       --> ATAC..............................................
EX747459       --> ..................................................
EX894487       --> ..................................................
FD949721       --> ..................................................
EV565399       --> ..................................................
EY932584       --> ..................................................
EX770697       --> ATACTTTGTCACAGTTGATATTGAGAAAGGA-TGAAA.............
EV565400       --> ..................................................
EX748152       --> ATACTTTGTCACAGTTGATATCGAGAAAGGAATGAAAGACGGAGAAGAAG
FD989255       --> TTACTTTGTCACAGTTGATATCGAGAAAGGAATGAAAGACGGAGAAGAAG

               801    -    851
UN09829        --> TGTCTTTCTACGAAGATGGTGAGCCCATTCTCGACGGTGACCCTGGTGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752176       <-- TGTCTTTCTACGAAGATGGTGAGCCCATTCTCGACGGTGACCCTGGTGAC
FD941432       --> ..................................................
EX747459       --> ..................................................
EX894487       --> ..................................................
FD949721       --> ..................................................
EV565399       --> ..................................................
EY932584       --> ..................................................
EX770697       --> ..................................................
EV565400       --> ..................................................
EX748152       --> TGTCTTTCTACGAAGATGGTGAGCCCATTCTCGACGGTGACCCTGGTGAC
FD989255       --> TGTCTTTCTACGAGGATGGTGAGCCCATTCTCGACGGTGACCCTGGTGAC

               851    -    901
UN09829        --> CTTAAGTTCCGAATTAAAACTGCACCACATTCCCGTTTCCGGAGAGATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752176       <-- CTTAAGTTCCGAATTAAAACTGCACCACATTCCCGTTTCCGGAGAGATGG
FD941432       --> ..................................................
EX747459       --> ..................................................
EX894487       --> ..................................................
FD949721       --> ..................................................
EV565399       --> ..................................................
EY932584       --> ..................................................
EX770697       --> ..................................................
EV565400       --> ..................................................
EX748152       --> CTTAAGTTCCGAATTAAAACTGCACCACATTCCCGTTTCCGGAGAGATGG
FD989255       --> CTTAAGTTCCGAATTAAAACTGCACCACATTCCCGTTTCCGGAGAGATGG

               901    -    951
UN09829        --> CAACGATCTACACGTGACCGTCAACATTACACTGGTTGAGGCGCTAGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752176       <-- CAACGATCTACACGTGACCGTCAACATTACACTGGTTGAGGCGCTAGTTG
FD941432       --> ..................................................
EX747459       --> ..................................................
EX894487       --> ..................................................
FD949721       --> ..................................................
EV565399       --> ..................................................
EY932584       --> ..................................................
EX770697       --> ..................................................
EV565400       --> ..................................................
EX748152       --> CAACGATCTACACGTGACCGTCAACATTACACTGGTTGAGGCGCTAGTTG
FD989255       --> CAACGATCTACACATGACCGTCAACATTACACTGGTTGAGGCGCTAGTTG

               951    -   1001
UN09829        --> GATTTGAGAAATCATTCAAACACTTGGATGAGCACGAAGTTGACATCGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752176       <-- GATTTGAGAAATCATTCAAACACTTGGATGAGCACGAAGTTGACATCGGT
FD941432       --> ..................................................
EX747459       --> ..................................................
EX894487       --> ..................................................
FD949721       --> ..................................................
EV565399       --> ..................................................
EY932584       --> ..................................................
EX770697       --> ..................................................
EV565400       --> ..................................................
EX748152       --> GATTTGAGAAATCATTCAAACACTTGGATGAGCACGAAGTTGACATCGGT
FD989255       --> GATTTGAGAAATCATTCAAACACTTGGATGAGCACGAAGTTGACATCGGT

               1001   -   1051
UN09829        --> TCCAAGGGAATTACAAAGCCCAAGGAAGTGAAGAAGTTTAAAGGAGAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752176       <-- TCCAAGGGAATTACAAAGCCCAAGGAAGTGAAGAAGTTTAAAGGAGAAGG
FD941432       --> ..................................................
EX747459       --> ..................................................
EX894487       --> ..................................................
FD949721       --> ..................................................
EV565399       --> ..................................................
EY932584       --> ..................................................
EX770697       --> ..................................................
EV565400       --> ..................................................
EX748152       --> TCCAAGGGAATTACAAAGCCCAAGGAAGTGAAGAAGTTTAAAGGAGAAGG
FD989255       --> TCCAAGGGAATTACAAAGCCCAAGGAAGTGAAGAAGTTTAAAGGAGAAGG

               1051   -   1101
UN09829        --> GATGCCACTTCACTACAGCACAAAGAAAGGCAACCTTTTTGTCACTTTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752176       <-- GATGCCACTTCACTACAGCACAAAGAAAGGCAACCTTTTTGTCACTTTCG
FD941432       --> ..................................................
EX747459       --> ..................................................
EX894487       --> ..................................................
FD949721       --> ..................................................
EV565399       --> ..................................................
EY932584       --> ..................................................
EX770697       --> ..................................................
EV565400       --> ..................................................
EX748152       --> GATGCCACTTCACTACAGCACAAAGAAAGGCAACCTTTTTGTCACTTTCG
FD989255       --> GATGCCACTTCACTACAGCACAAAGAAAGGCAACCTTTTTGTCACTTTCG

               1101   -   1151
UN09829        --> AGGTTTTATTTCCTTCTTCTCTCACGGAGGATCAGAAGAAGAAGATTAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752176       <-- AGGTTTTATTTCCTTCTTCTCTCACGGAGGATCAGAAGAAGAAGATTAAA
FD941432       --> ..................................................
EX747459       --> ..................................................
EX894487       --> ..................................................
FD949721       --> ..................................................
EV565399       --> ..................................................
EY932584       --> ..................................................
EX770697       --> ..................................................
EV565400       --> ..................................................
EX748152       --> AGGTTTTATTTCCTTCTTCTCTCACGGAGGATCAGAAGAAGA-GATTAAA
FD989255       --> AGGTTTTATTTCCTTCTTCTCTCACGGAGGATCAGAAGAAGAAGATTAAA

               1151   -   1201
UN09829        --> GAAGTCTTGGCTTAGTTCTCTCTCTCTCTAGAAGTTTGGGGTCTTAAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752176       <-- GAAGTCTTGGCTTAGTTCTCTCTCTCTCTAGAAGTTTGGGGTCTTAAAGA
FD941432       --> ..................................................
EX747459       --> ..................................................
EX894487       --> ..................................................
FD949721       --> ..................................................
EV565399       --> ..................................................
EY932584       --> ..................................................
EX770697       --> ..................................................
EV565400       --> ..................................................
EX748152       --> GAAGTCTTGGCTTAGTTCTCTCTCTCTCTAGAAGTTTGGGGTCTTAA-GA
FD989255       --> GAAGTCTTGGCTTAGTTCTCTCTCTCTCTAGAAGTTTGGGGTCT-AAAGA

               1201   -   1251
UN09829        --> GAACGAACGTGTGAGGGTCCATAATGTAACATGGCTAGGTTTTAATATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752176       <-- GAACGAACGTGTGAGGGTCCATAATGTAACATGGCTAGGTTTTAATATAT
FD941432       --> ..................................................
EX747459       --> ..................................................
EX894487       --> ..................................................
FD949721       --> ..................................................
EV565399       --> ..................................................
EY932584       --> ..................................................
EX770697       --> ..................................................
EV565400       --> ..................................................
EX748152       --> GAACGA-CGTGTGAGGGTCCATAATGTA-CATGG................
FD989255       --> GAACGAACGTGTGAGGGTCCATAATGTAACATGGCTAGGTTTTAATATAT

               1251   -   1301
UN09829        --> AGGAAGAACAAAAAAACAGGGGAGACGAAGAGGAAGATGAGAAAGCCAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX752176       <-- AGGAAGAACAAAAA....................................
FD941432       --> ..................................................
EX747459       --> ..................................................
EX894487       --> ..................................................
FD949721       --> ..................................................
EV565399       --> ..................................................
EY932584       --> ..................................................
EX770697       --> ..................................................
EV565400       --> ..................................................
EX748152       --> ..................................................
FD989255       --> AGGAAGAACAAAAAAACAGGGGAGACGAAGAGGAAGATGAGAAAGCCAAC

               1301   -   1351
UN09829        --> A
                   ~
EX752176       <-- .
FD941432       --> .
EX747459       --> .
EX894487       --> .
FD949721       --> .
EV565399       --> .
EY932584       --> .
EX770697       --> .
EV565400       --> .
EX748152       --> .
FD989255       --> A