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Alignment for radish unigene UN09859

               1      -     51
UN09859        --> GGATTTCGATTCTCTTCTCTCATTCTATTATCTTTGG-AAAAAAAAAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432236       <-- ..................................................
EY925890       <-- ..................................................
FD967387       <-- ..................................................
EY918596       <-- ..................................................
EV540323       <-- ..................................................
FD556529       --> GGATTTCGATTCTCTTCTCTCATTCTATTATCTTTGGGAAAAAAAAAAAA
FY435270       --> ...............gCTCTCATTCTATTATCTTTGG-AATAAAAAAAAA
EY929473       --> ..................ggCATTCTATTATCTTTGG-AAAAAAAAAAAA
EY929901       --> ...................ggATTCTATTATCTTTGG-AAAAAAAAAAAA
FY437712       --> .............................................AAAAA
FY453169       --> .............................................AAAAA
FY432980       --> ..................................................
FY453908       --> ..................................................
FY452588       --> ..................................................
FD971191       --> ..................................................
EY922673       --> ..................................................

               51     -    101
UN09859        --> AAAACAAAACATGCATTCAGTTCCAGTGATTCTCACTCT-CACTGCACTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432236       <-- ..................................................
EY925890       <-- ..................................................
FD967387       <-- ..................................................
EY918596       <-- ..................................................
EV540323       <-- ..................................................
FD556529       --> AAAACAAAACATGCATTCAGTTCCAGTGATTCTCACTCT-CACTGCACTT
FY435270       --> A---CAAAACATGCATTCAGTTCCAGTGATTCTCACTCT-CACTGCACTT
EY929473       --> AAAACAAAACATGCATTCAGTTCCAGTGATTCTCACTCT-CACTGCACTT
EY929901       --> AAAACAAAACATGCATTCAGTTCCAGTGATTCTCACTCT-CACTGCACTT
FY437712       --> AAAACAAAACATGCATTCAGTTCCAGTGATTCTCACTCT-CACTGCACTT
FY453169       --> AAAACAAAACATGCATTCAGTTCCAGTGAT-CTC-CTATAGGCTGCACTT
FY432980       --> ...........TGCATTCAGTTC-AGTGATTCTCACTCT-CACTGCACTT
FY453908       --> ...........TGCATTCAGTTCCAGTGATTCTCACTCT-CACTGCACTT
FY452588       --> ..................................................
FD971191       --> ..................................................
EY922673       --> ..................................................

               101    -    151
UN09859        --> ACAGTGCTCTTAACATCAACGGTGCAAGTCATCGGATGGCGTCCATATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432236       <-- ..................................................
EY925890       <-- ..................................................
FD967387       <-- ..................................................
EY918596       <-- ..................................................
EV540323       <-- ..................................................
FD556529       --> ACAGTGCTCTTAACATCAACGGTGCAAGTCATCGGATGGCGTCCATATCC
FY435270       --> ACAGTGCTCTTAACATCAACGGTGCAAGTCATCGGATGGCGTCCATATCC
EY929473       --> ACAGTGCTCTTAACATCAACGGTGCAAGTCATCGGATGGCGTCCATATCC
EY929901       --> ACAGTGCTCTTAACATCAACGGTGCAAGTCATCGGATGGCGTCCATATCC
FY437712       --> ACAGTGCTCTTAACATCAACGGTGCAAGTCATCGGATGGCGTCCATATCC
FY453169       --> ACAGTGCTCTTAACATCAACGGTCCATGACGGCGGATGGCGTCCATATCC
FY432980       --> ACAGTGCTCTTAACATCAACGGTGCAAGTCATCGGATGGCGTCCATATCC
FY453908       --> ACAGTGCTCTTAACATCAACGGTGCAAGTCATCGGATGGCGTCCATATCC
FY452588       --> ..................................................
FD971191       --> ..................................................
EY922673       --> ..................................................

               151    -    201
UN09859        --> TCCCAAAACCAACGGCTCCGATCAAATCTTCGACGCTTCAAAGAAATACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432236       <-- ..................................................
EY925890       <-- ..................................................
FD967387       <-- ..................................................
EY918596       <-- ..................................................
EV540323       <-- ..................................................
FD556529       --> TCCCAAAACCAACGGCTCCGATCAAATCTTCGACGCTTCAAAGAAATACG
FY435270       --> TCCCAAAACCAACGGCTCCGATCAAATCTTCGACGCTTCAAAGAAATACG
EY929473       --> TCCCAAAACCAACGGCTCCGATCAAATCTTCGACGCTTCAAAGAAATACG
EY929901       --> TCCCAAAACCAACGGCTCCGATCAAATCTTCGACGCTTCAAAGAAATACG
FY437712       --> TCCCAAAACCAACGGCTCCGATCAAATCTTCGACGCTTCAAAGAAATACG
FY453169       --> TCCCAAAACCAACGGCTCCGATCAAATCTTCGACGCTTCAAAGAAATACG
FY432980       --> TCCCAAAACCAACGGCTCCGATCAAATCTTCGACGCTTCAAAGAAATACG
FY453908       --> TCCCAAAACCAACGGCTCCGATCAAATCTTCGACGCTTCAAAGAAATACG
FY452588       --> ............CGGCTCCGATCAAATCTTCGACGCTTCAA-GAAATACG
FD971191       --> ..................................................
EY922673       --> ..................................................

               201    -    251
UN09859        --> AAGGCTCATCCAATCTCGTCCGCCTCCGTTACCACATGGGCCCAGTCCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432236       <-- ..................................................
EY925890       <-- ..................................................
FD967387       <-- ..................................................
EY918596       <-- ..................................................
EV540323       <-- ..................................................
FD556529       --> AAGGCTCATCCAATCTCGTCCGCCTCCGTTACCACATGGGCCCAGTCCTC
FY435270       --> AAGGCTCATCCAATCTCGTCCGCCTCCGTTACCACATGGGCCCAGTCCTC
EY929473       --> AAGGCTCATCCAATCTCGTCCGCCTCCGTTACCACATGGGCCCAGTCCTC
EY929901       --> AAGGCTCATCCAATCTCGTCCGCCTCCGTTACCACATGGGCCCAGTCCTC
FY437712       --> AAGGCTCATCCAATCTCGTCCGCCTCCGTTACCACATGGGCCCAGTCCTC
FY453169       --> AAGGCTCATCCAATCTCGTCCGCCTCCGTTACCACATGGGCCCAGTCCTC
FY432980       --> AAGGCTCATCCAATCTCGTCCGCCTCCGTTACCACATGGGCCCAGTCCTC
FY453908       --> AAGGCTCATCCAATCTCGTCCGCCTCCGTTACCACATGGGCCCAGTCCTC
FY452588       --> AACGCTCATCCAATCTCGTCCGCCTCCGTTACCACATGGGCCCAGTCCTC
FD971191       --> ..................................................
EY922673       --> ..................................................

               251    -    301
UN09859        --> ACCAACAACATCACCGTCCATCCAATCTGGTACGGCACGTGGCAAAAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432236       <-- ..................................................
EY925890       <-- ..................................................
FD967387       <-- ..................................................
EY918596       <-- ..................................................
EV540323       <-- ..................................................
FD556529       --> ACCAACAACATCACCGTCCATCCAATCTGGTACGGCACGTGGCAAAAATC
FY435270       --> ACCAACAACATCACCGTCCATCCAATCTGGTACGGCACGTGGCAAAAATC
EY929473       --> ACCAACAACATCACCGTCCATCCAATCTGGTACGGCACGTGGCAAAAATC
EY929901       --> ACCAACAACATCACCGTCCATCCAATCTGGTACGGCACGTGGCAAAAATC
FY437712       --> ACCAACAACATCACCGTCCATCCAATCTGGTACGGCACGTGGCAAAAATC
FY453169       --> ACCAACAACATCACCGTCCATCCAATCTGGTACGGCACGTGGCAAAAATC
FY432980       --> ACCAACAACATCACCGTCCATCCAATCTGGTACGGCACGTGGCAAAAATC
FY453908       --> ACCAACAACATCACCGTCCATCCAATCTGGTACGGCACGTGGCAAAAATC
FY452588       --> ACCAACAACATCACCGTCCATCCAATCTGGTACGGCACGTGGCAAAAATC
FD971191       --> ..................................................
EY922673       --> ..................................................

               301    -    351
UN09859        --> CCAGAAGAAAATCATCCGCGAGTTCATCAACTCAATCTCAGCCGTCGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432236       <-- ..................................................
EY925890       <-- ..................................................
FD967387       <-- ..................................................
EY918596       <-- ..................................................
EV540323       <-- ..................................................
FD556529       --> CCAGAAGAAAATCATCCGCGAGTTCATCAACTCAATCTCAGCCGTCGGAT
FY435270       --> CCAGAAGAAAATCATCCGCGAGTTCATCAACTCAATCTCAGCCGTCGGAT
EY929473       --> CCAGAAGAAAATCATCCGCGAGTTCATCAACTCAATCTCAGCCGTCGGAT
EY929901       --> CCAGAAGAAAATCATCCGCGAGTTCATCAACTCAATCTCAGCCGTCGGAT
FY437712       --> CCAGAAGAAAATCATCCGCGAGTTCATCAACTCAATCTCAGCCGTCGGAT
FY453169       --> CCAGAAGAAAATCATCCGCGAGTTCATCAACTCAATCTCAGCCGTCGGAT
FY432980       --> CCAGAAGAAAATCATCCGCGAGTTCATCAACTCAATCTCAGCCGTCGGAT
FY453908       --> CCAGAAGAAAATCATCCGCGAGTTCATCAACTCAATCTCAGCCGTCGGAT
FY452588       --> CCAGAAGAAAATCATCCGCGAGTTCATCAACTCAATCTCAGCCGTCGGAT
FD971191       --> ..................................................
EY922673       --> ..................................................

               351    -    401
UN09859        --> CCAAACACCCCTCCGTCTCCGGTTGGTGGAAAACCGTACAGCTCTACACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432236       <-- ..................................................
EY925890       <-- ..................................................
FD967387       <-- ..................................................
EY918596       <-- ..................................................
EV540323       <-- ..................................................
FD556529       --> CCAAACACCCCTCCGTCTCCGGTTGGTGGAAAACCGTACAGCTCTACACT
FY435270       --> CCAAACACCCCTCCGTCTCCGGTTGGTGGAAAACCGTACAGCTCTACACT
EY929473       --> CCAAACACCCCTCCGTCTCCGGTTGGTGGAAAACCGTACAGCTCTACACT
EY929901       --> CCAAACACCCCTCCGTCTCCGGTTGGTGGAAAACCGTACAGCTCTACACT
FY437712       --> CCAAACACCCCTCCGTCTCCGGTTGGTGGAAAACCGTACAGCTCTACACT
FY453169       --> CCAAACACCCCTCCGTCTCCGGTTGGTGGAAAACCGTACAGCTCTACACT
FY432980       --> CCAAACACCCCTCCGTCTCCGGTTGGTGGAAAACCGTACAGCTCTACACT
FY453908       --> CCAAACACCCCTCCGTCTCCGGTTGGTGGAAAACCGTACAGCTCTACACT
FY452588       --> CCAAACACCCCTCCGTCTCCGGTTGGTGGAAAACCGTACAGCTCTACACT
FD971191       --> ..................................................
EY922673       --> ..................................................

               401    -    451
UN09859        --> GACCAAACCGGATCCAACATTACCGGTACGGTTCGTTTAGGCGAAGAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432236       <-- .....AACCGGATCCAACATTACCGGTACGGTTCGTTTAGGCGAAGAAAA
EY925890       <-- ..................................................
FD967387       <-- ..................................................
EY918596       <-- ..................................................
EV540323       <-- ..................................................
FD556529       --> GACCAAACCGGATCCAACATTACCGGTACGGTTCGTTTAGGCGAAGAAAA
FY435270       --> GACCAAACCGGATCCAACATTACCGGTACGGTTCGTTTAGGCGAAGAAAA
EY929473       --> GACCAAACCGGATCCAACATTACCGGTACGGTTCGTTTAGGCGAAGAGAA
EY929901       --> GACCAAACCGGGTCCAACATTACCGGTACGGTTCGTTTAGGCGAAGAGAA
FY437712       --> GACCAAACCGGATCCAACATTACCGGTACGGTTCGTTTAGGCGAAGAAAA
FY453169       --> GACCAAACCGGATCCAACATTACCGGTACGGTTCGTTTAGGCGAAGAAAA
FY432980       --> GACCAAACCGGATCCAACATTACCGGTACGGTTCGTTTAGGCGAAGAAAA
FY453908       --> GACCAAACCGGATCCAACATTACCGGTACGGTTCGTTTAGGCGAAGAAAA
FY452588       --> GACCAAACCGGATCCAACATTACCGGTACGGTTCGTTTAGGCGAAGAAAA
FD971191       --> ..................................................
EY922673       --> ..................................................

               451    -    501
UN09859        --> AAACGACCGGTTCTATTCACACGGCAAATCCCTAACCCGGTTATCGATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432236       <-- AAACGACCGGTTCTATTCACACGGCAAATCCCTAACCCGGTTATCGATCC
EY925890       <-- ..................................................
FD967387       <-- ..................................................
EY918596       <-- ..................................................
EV540323       <-- ..................................................
FD556529       --> AAACGACCGGTTCTATTCACACGGCAAATCCCTAACCCGGTTATCGATCC
FY435270       --> AAACGACCGGTTCTATTCACACGGCAAATCCCTAACCCGGTTATCGATCC
EY929473       --> AAACGACCGGTTCTATTCACACGGCAAATCATTAACCCGGTTATCGATCC
EY929901       --> AAACGACCGGTTCTATTCACACGGCAAATCATTAACCCGGTTATCGATCC
FY437712       --> AAACGACCGGTTCTATTCACACGGCAAATCCCTAACCCGGTTATCGATCC
FY453169       --> AAACGACCGGTTCTATTCACACGGCAAATCCCTAACCCGGTTATCGATCC
FY432980       --> AAACGACCGGTTCTATTCACACGGCAAATCCCTAACCCGGTTATCGATCC
FY453908       --> AAACGACCGGTTCTATTCACACGGCAAATCCCTAACCCGGTTATCGATCC
FY452588       --> AAACGACCGGTTCTATTCACACGGCAAATCCCTAACCCGGTTATCGATCC
FD971191       --> ..................................................
EY922673       --> ..................................................

               501    -    551
UN09859        --> AGTCCGTTATAAAATCCGCCGTCGCTTCAAGATCTCGGCCGTTGCCGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432236       <-- AGTCCGTTATAAAATCCGCCGTCGCTTCAAGATCTCGGCCGTTGCCGGTG
EY925890       <-- ..................................................
FD967387       <-- ..................................................
EY918596       <-- ..................................................
EV540323       <-- ..................................................
FD556529       --> AGTCCGTTATAAAATCCGCCGTCGCTTCAAGATCTCGGCCGTTGCCGGTG
FY435270       --> AGTCCGTTATAAAATCCGCCGTCGCTTCAAGATCTCGGCCGTTGCCGGTG
EY929473       --> AGTCCGTTATAAAATCCGCCGTCGCTTCAAGATCTCGGCCGTTGCCGGTG
EY929901       --> AGTCCGTTATAAAATCCGCCGTCGCTTCAAGATCTCGGCCGTTGCCGGTG
FY437712       --> AGTCCGTTATAAAATCCGCCGTCGCTTCAAGATCTCGGCCGTTGCCGGTG
FY453169       --> AGTCCGTTATAAAATCCGCCGTCGCTTCAAGATCTCGGCCGTTGCCGGTG
FY432980       --> AGTCCGTTATAAAATCCGCCGTCGCTTCAAGATCTCGGCCGTTGCCGGTG
FY453908       --> AGTCCGTTATAAAATCCGCCGTCGCTTCAAGATCTCGGCCGTTGCCGGTG
FY452588       --> AGTCCGTTATAAAATCCGCCGTCGCTTCAAGATCTCGGCCGTTGCCGGTG
FD971191       --> ..................................................
EY922673       --> ..................................................

               551    -    601
UN09859        --> AATCCCAAAGGCGGTCTCTACCTCCTCCTCACCTCCGACGACGTCTACGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432236       <-- AATCCCAAAGGCGGTCTCTACCTCCTCCTCACCTCCGACGACGTCTACGT
EY925890       <-- ..................................................
FD967387       <-- ..................................................
EY918596       <-- ..................................................
EV540323       <-- ..................................................
FD556529       --> AATCCCAAAGGCGGTCTCTACCTCCTCCTCACCTCCGACGACGTCTACGT
FY435270       --> AATCCCAAAGGCGGTCTCTACCTCCTCCTCACCTGCGACGACGTCTACGT
EY929473       --> AATCCCAAAGGCGGTCTCTATCTCCTCCTCACCTCCGACGGCGTCTACGT
EY929901       --> AATCCCAAAGGCGGTCTCTATCTCCTCCTCACCTCCGACGACGTCTACGT
FY437712       --> AATCCCAAAGGCGGTCTCTACCTCCTCCTCACCTCCGACGACGTCTACGT
FY453169       --> AATCCCAAAGGCGGTCTCTACCTCCTCCTCACCTCCGACGACGTCTACGT
FY432980       --> AATCCCAAAGGCGGTCTCTACCTCCTCCTCACCTCCGACGACGTCTACGT
FY453908       --> AATCCCAAAGGCGGTCTCTACCTCCTCCTCACCTCCGACGACGTCTACGT
FY452588       --> AATCCCAAAGGCGGTCTCTACCTCCTCCTCACCTCCGACGACGTCTACGT
FD971191       --> ..................................................
EY922673       --> ..................................................

               601    -    651
UN09859        --> TCAAGATTTCTGCGGCCAAGTCTGTGGTTTCCACTACTTCACGTTCCCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432236       <-- TCAAGATTTCTGCGGCCAAGTCTGTGGTTTCCACTACTTCACGTTCCCGT  Raphanus sativus cv GSK3-1
EY925890       <-- .........CTGTGGCCAGGTCTGTGGTTTCCACTACTTCACGTTCCCGT  Raphanus sativus var. oleiformis
FD967387       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY918596       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV540323       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556529       --> TCAAGATTTCTGCGGCCAGGTCTGTGGTTTCC..................  Raphanus raphanistrum subsp. landra
FY435270       --> TCAAGATTTCTGCGGCCAAGTCTGTGGTT-CCACTACTTCACGTTCCCGT  Raphanus sativus cv GSK3-1
EY929473       --> TCAAGATTTCTGTGGCCAGGTCTGTGGTTTCCACTACTTCACGTTCCCGT  Raphanus sativus var. oleiformis
EY929901       --> TCAAGATTTCTGCGGCCAGGTCTGTGGTTTCCACTACTTCACGTTCCCGT  Raphanus sativus var. oleiformis
FY437712       --> TCAAGATTTCTGCGGCCAAGTCTGTGGTTTCCACTACTTCACGTTCCCGT  Raphanus sativus cv GSK3-1
FY453169       --> TCAAGATTTCTGCGGCCAAGTCTGTGGTTTCCACTACTTCACGTTCCCGT  Raphanus sativus cv GSK3-1
FY432980       --> TCAAGATTTCTGCGGCCAAGTCTGTGGTTTCCACTACTTCACGTTCCCGT  Raphanus sativus cv GSK3-1
FY453908       --> TCAAGATTTCTGCGGCCAAGTCTGTGGTTTCCACTACTTCACGTTCCCGT  Raphanus sativus cv GSK3-1
FY452588       --> TCAAGATTTCTGCGGCCAAGTCTGTGGTTTCCACTACTTCACGTTCCCGT  Raphanus sativus cv GSK3-1
FD971191       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY922673       --> ..................................................  Raphanus raphanistrum subsp. landra

               651    -    701
UN09859        --> CGATAGTCGGATTCACGTTGCCGTACGCTTGGGTTGGGAACTCGGCGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432236       <-- CGATAGTCGGATTCACGTTGCCGTACGCTTGGGTTGGGAACTCGGCGAAG
EY925890       <-- CGATCGTTGGATTCACCTTGCCGTACGCTTGGGTTGGGAACTCGGCGAAG
FD967387       <-- .......gGGATTCACGTTGCCGTACGCTTGGGTTGGGAACTCGGCGAAG
EY918596       <-- .......................................gCTCGGCGAAG
EV540323       <-- ..................................................
FD556529       --> ..................................................
FY435270       --> CGATAGTCGGATTCACGTTGCCGTACGCTTGG..................
EY929473       --> CGATCGTTGGATTCACCTTGCCGTACGCTTGGGTTGGGAACTCGGCGAAG
EY929901       --> CGATCGTTGGATTCACCTTGCCGTACGCTTGGGTTGG.............
FY437712       --> CGATAGTCGGATTCACGTTGCCGTACGCTTGGGTTGGGAACTCGGCGAAG
FY453169       --> CGATAGTCGGATTCACGTTGCCGTACGCTTGGGTTGGGAACTCGGCGAAG
FY432980       --> CGATAGTCGGATTCACGTTGCCGTACGCTTGGGTTGGGAACTCGGCGAAG
FY453908       --> CGATAGTCGGATTCACGTTGCCGTACGCTTGGGTTGGGAACTCGGCGAAG
FY452588       --> CGATAGTCGGATTCACGTTGCCGTACGCTTGGGTTGGGAACTCGGCGAAG
FD971191       --> .......gGGATTCACGTTGCCGTACGCTTGGGTTGGGAACTCGGCGAAG
EY922673       --> .......................................gCTCGGCGAAG

               701    -    751
UN09859        --> TTCTGTCCCGGAGTCTGTGCGTATCCCTTCGCCGTACCGGCCTTTATACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432236       <-- TTCTGTCCCGGAGTCTGTGCGTATCCCTTCGCCGTACCGGCCTTTATACC  Raphanus sativus cv GSK3-1
EY925890       <-- TTTTGTCCCGGAGTTTGTGCGTATCCCTTCGCCGTACCGGCCTTTATACC  Raphanus sativus var. oleiformis
FD967387       <-- TTCTGTCCCGGAGTCTGTGCCTATCCCTTCGCCGTACCGGCGTTTATACC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY918596       <-- TTCTGTCCCGGAGTCTGTGCGCATCCCTTCGCCGTACCGGCGTTTATACC  Raphanus raphanistrum subsp. landra
EV540323       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556529       --> ..................................................  Raphanus raphanistrum subsp. landra
FY435270       --> ..................................................  Raphanus sativus cv GSK3-1
EY929473       --> TTTTGTCCCGGAGTTTGTGCGTATCCCTTCGCCGTACCGGCCTTTATA..  Raphanus sativus var. oleiformis
EY929901       --> ..................................................  Raphanus sativus var. oleiformis
FY437712       --> TTCTGTCCCGGAGTCTGTGCGTATCCCTTCGCCGTACCGGCCTTTATACC  Raphanus sativus cv GSK3-1
FY453169       --> TTCTGTCCCGGAGTCTGTGCGTATCCCTTCGCCGTACCGGCCTTTATACC  Raphanus sativus cv GSK3-1
FY432980       --> TTCTGTCCCGGAGTCTGTGCGTATCCCTTCGCCGTACCGGCCTTTATACC  Raphanus sativus cv GSK3-1
FY453908       --> TTCTGTCCCGGAGTCTGTGCGTATCCCTTCGCCGTACCGGCCTTTATACC  Raphanus sativus cv GSK3-1
FY452588       --> TTCTGTCCCGGAGTCTGTGCGTATCCCTTCGCCGTACCGGCCTTTATACC  Raphanus sativus cv GSK3-1
FD971191       --> TTCTGTCCCGGAGTCTGTGCCTATCCCTTCGCCGTACCGGCGTTTATACC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY922673       --> TTCTGTCCCGGAGTCTGTGCGCATCCCTTCGCCGTACCGGCGTTTATACC  Raphanus raphanistrum subsp. landra

               751    -    801
UN09859        --> GGGGATTAAACCGGTTAAATCGCCGAACGGTGATATTGGTGTTGATGGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432236       <-- GGGGATTAAACCGGTTAAATCGCCGAACGGTGATATTGGTGTTGATGGGA
EY925890       <-- GGGGATTAAACCGGTTAAATCGCCGAACGGTGATATTGGTGTTGATGGGA
FD967387       <-- GGGGATTAAACCGGTTAAATCGCCGAACGGTGATATTGGTGTTGATGGGA
EY918596       <-- GGGGATTAAACCGGTTAAATCGCCGAACGGTGATATTGGTGTTGATGGGA
EV540323       <-- ..................................................
FD556529       --> ..................................................
FY435270       --> ..................................................
EY929473       --> ..................................................
EY929901       --> ..................................................
FY437712       --> GGGGATTAAACCGGTTAAATCGCCGAACGGTGATATTGGTGTTGATGGGA
FY453169       --> GGGGATTAAACCGGTTAAATCGCCGAACGGTGATATTGGTGTTGATGGGA
FY432980       --> GGGGATTAAACCGGTTAAATCGCCGAACGGTGATATTGGTGTTGATGGGA
FY453908       --> GGGGATTAAACCGGTTAAATCGCCGAACGGTGATATTGGTGTTGATGGGA
FY452588       --> GGGGATTAAACCGGTTAAATCGCCGAACGGTGATATTGGTGTTGATGGGA
FD971191       --> GGGGATTAAACCGGTTAAATCGCCGAACGGTGATATTGGTGTTGATGGGA
EY922673       --> GGGGATTAAACCGGTTAAATCGCCGAACGGTGATATTGGTGTTGATGGGA

               801    -    851
UN09859        --> TGATAAGTGTGATCGCGCACGAGATTGCTGAGCTGGCAACTAATCCGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432236       <-- TGATAAGTGTGATCGCGCACGAGATTGCTGAGCTGGCAACTAATCCGTTG  Raphanus sativus cv GSK3-1
EY925890       <-- TGATAAGTGTGATCGCTCACGAGATTACTGAGCTGGCAACTAATCCGTTG  Raphanus sativus var. oleiformis
FD967387       <-- TGATAAGTGTGATCGCTCACGAGATTGCTGAGCTGGCAACTAATCCGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY918596       <-- TGATAAGTGTGATCGCTCACGAGATTGCTGAGCTGGCAACTAATCCGTTG  Raphanus raphanistrum subsp. landra
EV540323       <-- ...................................GCAACTAATCCGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556529       --> ..................................................  Raphanus raphanistrum subsp. landra
FY435270       --> ..................................................  Raphanus sativus cv GSK3-1
EY929473       --> ..................................................  Raphanus sativus var. oleiformis
EY929901       --> ..................................................  Raphanus sativus var. oleiformis
FY437712       --> TGATAAGTGTGATCGCGCACGAGATTGCTGAGCTGGCAACTAATCCGTTG  Raphanus sativus cv GSK3-1
FY453169       --> TGATAAGTGTGATCGCGCACGAGATTGCTGAGCTGGCAACTAATCCGTTG  Raphanus sativus cv GSK3-1
FY432980       --> TGATAAGTGTGATCGCGCACGAGATTGCTGAGCTGGCAACTAATCCGTTG  Raphanus sativus cv GSK3-1
FY453908       --> TGATAAGTGTGATCGCGCACGAGATTGCTGAGCTGGCAACTAATCCGTTG  Raphanus sativus cv GSK3-1
FY452588       --> TGATAAGTGTGATCGCGCACGAGATTGCTGAGCTGGCAACTAATCCGTTG  Raphanus sativus cv GSK3-1
FD971191       --> TGATAAGTGTGATCGCTCACGAGATTGCTGAGCTGGCAACTAATCCGTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY922673       --> TGATAAGTGTGATCGCTCACGAGATTGCTGAGCTGGCAACTAATCCGTTG  Raphanus raphanistrum subsp. landra

               851    -    901
UN09859        --> GTTAACGCTTGGTACGCAGGAGCTGACCCGGTGGCGCCGGTTGAGATAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432236       <-- GTTAACGCTTGGTACGCAGGAGCTGACCCGGTGGCGCCGGTTGAGATAGC
EY925890       <-- GTTAACGCTTGGTACGCAGGAGCTGACCCGGTGGCGCCGGTTGAGATAGC
FD967387       <-- GTTAACGCTTGGTACGCAGGAGCTGACCTGGTGGCTCCGGTTGAGATAGC
EY918596       <-- GTTAACGCTTGGTACGCAGGAGCTGACCCGGTGGCGCCGGTTGAGATAGC
EV540323       <-- GTTAACGCTTGGTAGGCAGGAGCTGACCCGGTGGCTCCGGTTGAGATAGC
FD556529       --> ..................................................
FY435270       --> ..................................................
EY929473       --> ..................................................
EY929901       --> ..................................................
FY437712       --> GTTAACGCT.........................................
FY453169       --> GTTAACGCTTGGTACGCAGGAGCTGACCCG....................
FY432980       --> GTTAACGCTTGGTACGCAGGAGCTGACCCGGTGGCGCCGGTTGAGATAGC
FY453908       --> GTTAACGCTTGGTACGCAGGAGCTGACCCGGTGGCGCCGGTTGAGATAGC
FY452588       --> GTTAACGCTTGGTACGCAGGAGCTGACCCGGTGGCGCCGGTTGAGATAGC
FD971191       --> GTTAACGCTTGGTACGCAGGAGCTGACCTGGTGGCTCCGGTTGAGATAGC
EY922673       --> GTTAACGCTTGGTACGCAGGAGCTGACCCGGTGGCGCCGGTTGAGATAGC

               901    -    951
UN09859        --> GGATCTTTGCGAGGGTATTTATGGTACGGGAGGTGGTGGTTCGTACACTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432236       <-- GGATCTTTGCGAGGGTATTTATGGTACTGGAGGTGGTGGTTCGTACACTG  Raphanus sativus cv GSK3-1
EY925890       <-- GGATCTTTGCGAGGGTATTTATGGTACCGGAGGTGGTGGTTCGTACACTG  Raphanus sativus var. oleiformis
FD967387       <-- GGATCTTTGCGAGGGTATTTATGGTACGGGAGGTGGTGGTTCGTACACTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY918596       <-- GGATCTTTGCGAGGGTATTTATGGTACGGGAGGTGGTGGTTCGTACACTG  Raphanus raphanistrum subsp. landra
EV540323       <-- GGATCTTTGCGAGGGTATTTTTGGTACGGGAGGTGGTGGTTCGTACACTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556529       --> ..................................................  Raphanus raphanistrum subsp. landra
FY435270       --> ..................................................  Raphanus sativus cv GSK3-1
EY929473       --> ..................................................  Raphanus sativus var. oleiformis
EY929901       --> ..................................................  Raphanus sativus var. oleiformis
FY437712       --> ..................................................  Raphanus sativus cv GSK3-1
FY453169       --> ..................................................  Raphanus sativus cv GSK3-1
FY432980       --> GGATCTTTGCGAGGGTATTTATGGTACt......................  Raphanus sativus cv GSK3-1
FY453908       --> GGATCTTTGCGAGGGTATTTATGGTACTGGAG..................  Raphanus sativus cv GSK3-1
FY452588       --> GGATCTTTGCGAGGGTATTTATGGTACTGGAGGTGGTGGTTCGTACACTG  Raphanus sativus cv GSK3-1
FD971191       --> GGATCTTTGCGAGGGTATTTATGGTACGGGAGGTGGTGGTTCGTACACTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY922673       --> GGATCTTTGCGAGGGTATTTATGGTACGGGAGGTGGTGGTTCGTACACTG  Raphanus raphanistrum subsp. landra

               951    -   1001
UN09859        --> GACAGATGTTGAACGACGATCGTGGTGCCACGTATAATGTTAACGGGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432236       <-- GACAGATGTTGAACGATGATCGTGGTGCCACGTATAATGTTAACGGGATC
EY925890       <-- GACAGATGTTGAACGACGATCGTGGTGCCACGTATAATGTTAACGGGATC
FD967387       <-- GACAGATGTTGAACGACGATCGTGGTGCCACGTATAATGTTAACGGGATC
EY918596       <-- GACAGATGTTGAACGACGATCGTGGTGCCACGTATAATGTTAACGGGATC
EV540323       <-- GACAGATGTTGAACGACGATCGTGGTGCCACGTATAATGTTAACGGGATC
FD556529       --> ..................................................
FY435270       --> ..................................................
EY929473       --> ..................................................
EY929901       --> ..................................................
FY437712       --> ..................................................
FY453169       --> ..................................................
FY432980       --> ..................................................
FY453908       --> ..................................................
FY452588       --> GACAGATGTTGAACGATGATCGTGGTGCCACGTATAATGTTAACGGGATC
FD971191       --> GACAGATGTTGAACGACGATCGTGGTGCCACGTATAATGTTAACGGGATC
EY922673       --> GACAGATGTTGAACGACGATCGTGGTGCCACGTATAATGTTAACGGGATC

               1001   -   1051
UN09859        --> CGACGGCGGTATTTGATCCAGTGGTTATGGAACCACGTGGTTAGTTACTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432236       <-- CGACGGCGGTATTTGATCCAGTGGTTATGGAACCACGTGGTTAGTTACTG
EY925890       <-- CGACGGCGGTATTTGATCCAGTGGTTATGGAACCACGTGGTTAGTTACTG
FD967387       <-- CGACGGCGGTATTTGATCCAGTGGTTATGGAACCACGTGGTTAGTTACTG
EY918596       <-- CGACGGCGGTATTTGATCCAGTGGTTATGGAACCACGTGGTTAGTTACTG
EV540323       <-- CGACGGCGGTATTTGATCCAGTGG..........................
FD556529       --> ..................................................
FY435270       --> ..................................................
EY929473       --> ..................................................
EY929901       --> ..................................................
FY437712       --> ..................................................
FY453169       --> ..................................................
FY432980       --> ..................................................
FY453908       --> ..................................................
FY452588       --> CGACGGCGGTATTTGATCCAGTGGTTATGGAAACACGTGGTTAGTTACTG
FD971191       --> CGACGGCGGTATTTGATCCAGTGGTTATGGAACCACGTGGTTAGTTACTG
EY922673       --> CGACGGCGGTATTTGATCCAGTGGTTATGGAACCACGTGGTTAGTTACTG

               1051   -   1101
UN09859        --> TACCGGACCCAATAAGCTTGATTAGTGATTGGTTTAATGTTGCTGTTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432236       <-- TACCGGACCCAATAAGCTTGATTAGTGATTGGTTTAATGTTGCTGTTTGT
EY925890       <-- TACCGGACCCAATAAGCTTGATTAGTGATTGTTTTAATGTTGCTGTTTGT
FD967387       <-- TACCGGACCCAATAAGCTTGATTAGTAATTGGTTTAATGTTGCTGTTTGT
EY918596       <-- TACCGGACCCAATAAGCTTGATTAGTGATTGGTTTAATGTTGCTGTTTGT
EV540323       <-- ..................................................
FD556529       --> ..................................................
FY435270       --> ..................................................
EY929473       --> ..................................................
EY929901       --> ..................................................
FY437712       --> ..................................................
FY453169       --> ..................................................
FY432980       --> ..................................................
FY453908       --> ..................................................
FY452588       --> TACCGG............................................
FD971191       --> TACCGGACCCAATAAGCTTGATTAGTAATTGGTTTAATGTTGCTGTTTGT
EY922673       --> TACCGGACCCAATAAGCTTGATTAGTGATTGGTTTAATGTTGCTGTTTGT

               1101   -   1151
UN09859        --> GTCTTTATTTTGTATGTCGGGATCTTTCGGAGTTCGAGTTCGATGGATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432236       <-- GTCTTTATTTTGTATGTCGGGATCTTTCGGAGTTTGAGTTCGATGGATAA
EY925890       <-- GTCTTTATTTTGTATGTCGGGATCTTTCGGAGTTCGAGTTCGATGGATAA
FD967387       <-- GTCTTTGTTTTGTATGTCGGGATCTTCCGGAGTT-GAGTTCGATGGATAA
EY918596       <-- GTCTTTATTTTGTATGTCGGGATCTTTCGGAGTTCGAGTTCGATGGATAA
EV540323       <-- ..................................................
FD556529       --> ..................................................
FY435270       --> ..................................................
EY929473       --> ..................................................
EY929901       --> ..................................................
FY437712       --> ..................................................
FY453169       --> ..................................................
FY432980       --> ..................................................
FY453908       --> ..................................................
FY452588       --> ..................................................
FD971191       --> GTCTTTg...........................................
EY922673       --> GTCTTTATTTTGTATGTCGGGATCTTTCGGAGTTCGAGTTCGATGGATAA

               1151   -   1201
UN09859        --> GTGGGGCTTTTGTGTGGGAGAAAATTGTCGATGTGTAATGCATAATTAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432236       <-- GTGGGGCTTCTGTGTGGGAGAAAATTGTCGATGTGTAATGCATAATTAAA
EY925890       <-- GTGGGGCTTTTGTGTGGGAGAAAATTGTCGATGTGTAATGCATAATTAAA
FD967387       <-- GTGGGGCTTCTGTGTGGAAGAAAATTGTCGATGTGTAATGCATAATTAAA
EY918596       <-- GTGGGGCTTTTGTGTGGGAGAAAATTGTCGATGTGTAACGCATAATTAAA
EV540323       <-- ..................................................
FD556529       --> ..................................................
FY435270       --> ..................................................
EY929473       --> ..................................................
EY929901       --> ..................................................
FY437712       --> ..................................................
FY453169       --> ..................................................
FY432980       --> ..................................................
FY453908       --> ..................................................
FY452588       --> ..................................................
FD971191       --> ..................................................
EY922673       --> GTGGGGCTTTTGTGTGGGAGAAAATTGTCGATGTGTAACGCATAATTAAA

               1201   -   1251
UN09859        --> TTAGTTAATGATAGTTTAAGTTTGTTGATTATGTGGAAAATGTCAATTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432236       <-- TTAGTTAATGATAGTTTAAGTTTGTTGAT.....................
EY925890       <-- TTAGTTAATGATAGTTTAAGTTTGTTGATTATGTGGAAAATGTCAATTAT
FD967387       <-- TTAGTTAATGATAGTTTAAGTTTGTTG.......................
EY918596       <-- TTAGTTATTGATAGTTTAAGTTTGTTGATTATGTGGAAAATGTCAATTAT
EV540323       <-- ..................................................
FD556529       --> ..................................................
FY435270       --> ..................................................
EY929473       --> ..................................................
EY929901       --> ..................................................
FY437712       --> ..................................................
FY453169       --> ..................................................
FY432980       --> ..................................................
FY453908       --> ..................................................
FY452588       --> ..................................................
FD971191       --> ..................................................
EY922673       --> TTAGTTATTGATAGTTTAAGTTTGTTGATTATGTGGAAAATGTCAATTAT

               1251   -   1301
UN09859        --> GTTATTATGTTTACATATGTAACATATGATTCATATTGGCTTATCTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY432236       <-- .................................................
EY925890       <-- GTTATTATGTTTACATATGTAACATATGATTCATATTGGCTTATCTTCC
FD967387       <-- .................................................
EY918596       <-- GTTATTATGc.......................................
EV540323       <-- .................................................
FD556529       --> .................................................
FY435270       --> .................................................
EY929473       --> .................................................
EY929901       --> .................................................
FY437712       --> .................................................
FY453169       --> .................................................
FY432980       --> .................................................
FY453908       --> .................................................
FY452588       --> .................................................
FD971191       --> .................................................
EY922673       --> GTTATTATGc.......................................