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Alignment for radish unigene UN09908

               1      -     51
UN09908        --> AGGGGAAGCTGAGCTGTATTCGACTCCGCACAGGAGAGAGAGATCTTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD574121       <-- ..................................................
FD529438       <-- ..................................................
EY927892       <-- ..................................................
FD573724       <-- ..................................................
FD570033       --> AGGGGAAGCTGAGCTGTATTCGACTCCGCACAGGAGAGAGAGATCTTGAT
FD534629       --> ........................ggCGCACAGGAGAGAGAGATCTTGAT
EX750071       --> ...........................ggACAGGAGAGAGAGATCTTGAT
EY932091       --> ..........................gggcacGGAGAGAGAGATCTTGAT
FD533177       --> ............................ggacGGAGAGAGAGATCTTGAT
FD569538       --> ...........................ggcacGGAGAGAGAGATCTTGAT
EW717466       --> ..................................................

               51     -    101
UN09908        --> TCTTCCTTCCACACTTCACCAAAAAAATAAAATGAAAGAGATCGCCGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD574121       <-- ..................................................
FD529438       <-- ..................................................
EY927892       <-- ..................................................
FD573724       <-- ..................................................
FD570033       --> TCTTCCTTCCACACTTCACCAAAAAA-TAAAATGAAAGAGATCGCCGATC
FD534629       --> TCTTCCTTCCACACTTCACCAAA-GAATAAAATGAAAGAGATCGCCGATC
EX750071       --> TCTTCCTTCCACACTTCACCAAA-GAATAAAATGAAAGAGATCGCCGATC
EY932091       --> TCTTCCTTCCACACTTCACCAAAAAAATAAAATGAAAGAGATCGCCGATC
FD533177       --> TCTTCCTTCCACACTTCACCAAAAAAATAAAATGAAAGAGATCGCCGATC
FD569538       --> TCTTCCTTCCACACTTCACCAAAAAAATAAAATGAAAGAGATCGCCGATC
EW717466       --> ..................................................

               101    -    151
UN09908        --> AAAACTTCTTCCGCTACTGCCTCCTCGCCCTAATTTACTCCGGCCCACCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD574121       <-- ..................................................
FD529438       <-- ..................................................
EY927892       <-- ..................................................
FD573724       <-- ..................................................
FD570033       --> AAAACTTCTTCCGCTACTGCCTCCTCGCCCTAATTTACTCCGGCCCACCC
FD534629       --> AAAACTTCTTCCGCTACTGCCTCCTCGCCCTAATTTACTCCGGCCCACCC
EX750071       --> AAAACTTCTTCCGCTACTGCCTCCTCGCCCTAATTTACTCCGGCCCACCC
EY932091       --> AAAACTTCTTCCGCTACTGCCTCCTCGCCCTAATTTACTCCGGCCCACCC
FD533177       --> AAAACTTCTTCCGCTACTGCCTCCTCGCCCTAATTTACTCCGGCCCACCC
FD569538       --> AAAACTTCTTCCGCTACTGCCTCCTCGCCCTAATTTACTCCGGCCCACCC
EW717466       --> ..................................................

               151    -    201
UN09908        --> ACCGCCATCGCTCTCAAATTCCTCCAAGCTCCTTACGGCAAACACAACCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD574121       <-- ..................................................
FD529438       <-- ..................................................
EY927892       <-- ..................................................
FD573724       <-- ..................................................
FD570033       --> ACCGCCGTCGCTCTCAAATTCCTCCAAGCTCCTTACGGCAAACACAACCG
FD534629       --> ACCGCCATCGCTCTCAAATTCCTCCAAGCTCCTTACGGCAAACACAACCG
EX750071       --> ACCGCCATCGCTCTCAAATTCCTCCAAGCTCCTTACGGCAAACACAACCG
EY932091       --> ACCGCCATCGCTCTCAAATTCCTCCAAGCTCCTTACGGCAAACACAACCG
FD533177       --> ACCGCCATCGCTCTCAAATTCCTCCAAGCTCCTTACGGCAAACACAACCG
FD569538       --> ACCGCCGTCGCTCTCAAATTCCTCCAAGCTCCTTACGGCAAACACAACCG
EW717466       --> ..................................................

               201    -    251
UN09908        --> CACCGGATGGGGCCCCACTTTATCTCCCCCACTCGCTTGGTTCCTCATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD574121       <-- ..................................................
FD529438       <-- ..................................................
EY927892       <-- ..................................................
FD573724       <-- ..................................................
FD570033       --> CACCGGATGGGGCCCCACTTTATCTCCCCCACTCGCTTGGTTCCTCATGG
FD534629       --> CACCGGATGGGGCCCCACTTTATCTCCCCCACTCGCTTGGTTCCTCATGG
EX750071       --> CACCGGATGGGGCCCCACTTTATCTCCCCCACTCGCTTGGTTCCTCATGG
EY932091       --> CACCGGATGGGGCCCCACTTTATCTCCCCCACTCGCTTGGTTCCTCATGG
FD533177       --> CACCGGATGGGGCCCCACTTTATCTCCCCCACTCGCTTGGTTCCTCATGG
FD569538       --> CACCGGATGGGGCCCCACTTTATCTCCCCCACTCGCTTGGTTCCTCATGG
EW717466       --> ..................................................

               251    -    301
UN09908        --> AGAGCCCCACCTTATGGCTCTCCCTCCTCCTCTTCCCCTTCGGCCGCCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD574121       <-- .................................ttCCCTTCGGCCGCCAC  Raphanus sativus cv Early Scarlet Globe
FD529438       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY927892       <-- ..................................................  Raphanus sativus var. oleiformis
FD573724       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD570033       --> AGAGCCCCACCTTATGGCTCTCCCTCCTCCTCTTCCCCTTCGGCCGCCAC  Raphanus sativus cv Early Scarlet Globe
FD534629       --> AGATCCCCACCTTATGGCTCTCCCTCCTCCTCTTCCCCTTCGGCCGCCAC  Raphanus raphanistrum subsp. maritimus
EX750071       --> AGAGCCCCACCTTATGGCTCTCCCTCCTCCTCTTCCCCTTCGGCCGCCAC  Raphanus raphanistrum subsp. maritimus
EY932091       --> AGAGCCCCACCTTATGGCTCTCCCTCCTCCTCTTCCCCTTCGGCCGCCAC  Raphanus sativus var. oleiformis
FD533177       --> AGAGCCCCACCTTATGGCTCTCCCTCCTCCTCTTCCCCTTCGGCCGCCAC  Raphanus raphanistrum subsp. maritimus
FD569538       --> AGAGCCCCACCTTATGGCTCTCCCTCCTCCTCTTCCCCTTCGGCCGCCAC  Raphanus sativus cv Early Scarlet Globe
EW717466       --> ..................................................  Raphanus sativus var. oleiformis

               301    -    351
UN09908        --> TTTCTCAATCCAAAATCTCTCCTCCTCTTCTCGCCTTACCTCCTCCATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD574121       <-- GCTCTCAATCCGAAATCTCTCCTCCTCTTCTCTCCTTACCTCCTCCACTA  Raphanus sativus cv Early Scarlet Globe
FD529438       <-- .........................TCTTCTCGCCTTACCTCCTCCATTA  Raphanus raphanistrum subsp. maritimus
EY927892       <-- .........................................CCTCCATTA  Raphanus sativus var. oleiformis
FD573724       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD570033       --> GCTCTCAATCCGAAATCTCTCCTCCTCTTCTCTCCTTACCTCCTCCACTA  Raphanus sativus cv Early Scarlet Globe
FD534629       --> TTTCTCAATCCAAAATCTCTCCTCCTCTTCTCGCCTTACCTCCTCCATTA  Raphanus raphanistrum subsp. maritimus
EX750071       --> TTTCTCAATCCAAAATCTCTCCTCCTCTTCTCGCCTTACCTCCTCCATTA  Raphanus raphanistrum subsp. maritimus
EY932091       --> TTTCTCAATCCAAAATCTCTCCTCCTCTTCTCGCCTTACCTCCTCCATTA  Raphanus sativus var. oleiformis
FD533177       --> TTTCTCAATCCAAAATCTCTCCTCCTCTTCTCGCCTTACCTCCTCCATTA  Raphanus raphanistrum subsp. maritimus
FD569538       --> GCTCTCAATCCGAAATCTCTCCTCCTCTTCTCTCTTTACCTCCTCCACTA  Raphanus sativus cv Early Scarlet Globe
EW717466       --> ..................................................  Raphanus sativus var. oleiformis

               351    -    401
UN09908        --> CTTCCACCGCACCATCATCTACCCTCTCCGCCTCCTCCGCAGCTCCTCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD574121       <-- CTTCCACCGCACCATCATCTACCCTCTCCGCCTCCTCCGCAGCTCCTCCC
FD529438       <-- CTTCCACCGCACCATCATCTACCCTCTCCGCCTCCTCCGCAGCTCCTCCC
EY927892       <-- CTTCCACCGCACCATCATCTACCCTCTCCGCCTCCTCCGCAGCTCCTCCC
FD573724       <-- ..................................................
FD570033       --> CTTCCACCGCACCATCATCTACCCTCTCCGCCTCCTCCGCAGCTCCTCCC
FD534629       --> CTTCCACCGCACCATCATCTACCCTCTCCGCCTCCTCCGGAGCTCCTCCC
EX750071       --> CTTCCACCGCACCATCATCTACCCTCTCCGCCTCCTCCGGAGCTCCTCCC
EY932091       --> CTTCCACCGCACCATCATCTACCCTCTCCGCCTCCTCCGCAGCTCCTCCC
FD533177       --> CTTCCACCGCACCATCATCTACCCTCTCCGCCTCCTCCGCAGCTCCTCCC
FD569538       --> CTTCCACCGCACCATCATCTACCCTCTCCGCCTCCTCCGGAGCTCCTCCC
EW717466       --> ..................................................

               401    -    451
UN09908        --> CGAGTAAAAAGGGCTTTCCGATCAGCGTCGCCGCCATGGCGTTCACCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD574121       <-- CTAGTAAAAAGGGCTTTCCGATCAGCGTCGCCGCCATGGCGTTCACCTTT  Raphanus sativus cv Early Scarlet Globe
FD529438       <-- CGAGTAAAAAGGGCTTTCGGATCAGCGTCGCCGCCATGGCGTTCACCTTT  Raphanus raphanistrum subsp. maritimus
EY927892       <-- CGAGTAAAAAGGGCTTTCCGATCAGCGTCGCCGCCATGGCGTTCACCTTT  Raphanus sativus var. oleiformis
FD573724       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD570033       --> CTAGTAAAAAGGGCTTTCCGATCAGCGTCGCCGCCATGGCGTTCACCTTT  Raphanus sativus cv Early Scarlet Globe
FD534629       --> CAAGTAAAAAGGGCTTTCCGATCAGCGTCGCCGCCATGGCGTTCACCTTT  Raphanus raphanistrum subsp. maritimus
EX750071       --> CAAGTAAAAAGGGCTTTCCGATCAGCGTTGCCGCCATGGCGTTCACCTTT  Raphanus raphanistrum subsp. maritimus
EY932091       --> CGAGTAAAAAGGGCTTTCCGATCAGCGTCGCCGCCATGGCGTTCACCTTT  Raphanus sativus var. oleiformis
FD533177       --> CGAGTAAAAAGGGCTTTCGGATCAGCGTCGCCGCCATGGCGTTCACCTTT  Raphanus raphanistrum subsp. maritimus
FD569538       --> CTAGTAAAAAGGGCTTTCCGATCAGCGTCGCCGCCATGGCGTTCACCTTT  Raphanus sativus cv Early Scarlet Globe
EW717466       --> ..................................................  Raphanus sativus var. oleiformis

               451    -    501
UN09908        --> AATCTCTTCAACGCCTATATCCAGGCGAGGTACGTTTCTCATTACAAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD574121       <-- AATCTCTTCAACGCCTATATCCAGGCGAGGTACGTTTCTCATTACAAGAA
FD529438       <-- AATCTCTTCAACGCCTATATCCAGGCGAGGTACGTTTCTCATTACAAGAA
EY927892       <-- AATCTCTTCAACGCCTATATCCAGGCGAGGTACGTTTCTCATTACAAGAA
FD573724       <-- ......TTCAACGCCTATATCCAGGCGAGGTACGTTTCTCATTACAAGAA
FD570033       --> AATCTCTTCAACGCCTATATCCAGGCGAGGTACGTTTCTCATTACAAGAA
FD534629       --> AATCTCTTCAACGCCTATATCCAGGCGAGGTACGTTTCTCATTACAAGAA
EX750071       --> AATCTCTTCAACGCCTATATCCAGGCGAGGTACGTTTCTCATTACAAGAA
EY932091       --> AATCTCTTCAACGCCTATATCCAGGCGAGGTACGTTTCTCATTACAAGAA
FD533177       --> AATCTCTTCAACGCCTATATCCAGGCGAGGTACGTTTCTCATTACAAGAA
FD569538       --> AATCTCTTCAACGCCTATATCCAGGCGAGGTACGTTTCTCATTACAAGAA
EW717466       --> ..................................................

               501    -    551
UN09908        --> CGACTACGAAGTACAGTGGTTCTGGTGGCGGTTTATCGTTGGTTCGGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD574121       <-- CGACTACGAAGTACAGTGGTTCTGGTGGCGGTTTATCGTTGGTTCGGTGA
FD529438       <-- CGACTACGAAGTACAGTGGTTCTGGTGGCGGTTTATCGTTGGTTCGGTGA
EY927892       <-- CGACTACGAAGTACAGTGGTTCTGGTGGCGGTTTATCGTTGGTTCGGTGA
FD573724       <-- CGACTACGAAGGAGAATGGTTCTGGTGGCGGTTTATCGTTGGTTCGGTGA
FD570033       --> CGACTACGAAGTACAGTGGTTCTGGTGGCGGTTTATCGTTGGTTCGGTGA
FD534629       --> CGACTACGAAGTACAGTGGTTCTGGTGGCGGTTTATCGTTGGTTCGGTGA
EX750071       --> CGACTACGAAGTACAGTGGTTCTGGTGGCGGTTTATCGTTGGTTCGGTGA
EY932091       --> CGACTACGAAGTACAGTGGTTCTGGTGGCGGTTTATCGTTGGTTCGGTGA
FD533177       --> CGACTACGAAGTACAGTGGTTCTGGTGGCGGTTTATCGTTGGTTCGGTGA
FD569538       --> CGACTACGAAGGAGAATGGTTCTGGTGGCGGTTTATCGTTGGTTCGGTGA
EW717466       --> ..................................................

               551    -    601
UN09908        --> TCTTCGTAACCGGTATGTGGATTAACATCACGTCGGACCGGACTCTGGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD574121       <-- TCTTCGTAACCGGTATGTGGATTAACATCACGTCGGACCGGACTCTGGTA
FD529438       <-- TCTTCGTAACCGGTATGTGGATTAACATCACGTCGGACCGGACTCTGGTA
EY927892       <-- TCTTCGTAACCGGTATGTGGATTAACATCACGTCGGACCGGACTCTGGTA
FD573724       <-- TCTTCGTAACCGGTATGTGGATTAACATCACGTCGGACCGGACTCTAGTA
FD570033       --> TCTTCGTAACCGGTATGTGGATTAACATCACGTCGGACCGGACTCTGGTA
FD534629       --> TCTTCGTAACCGGTATGTGGATTAACATCACGTCGGACCGGACCCTGGTA
EX750071       --> TCTTCGTAACCGGTATGTGGATTAACATCACGTCGGACCGGACTCTGGTA
EY932091       --> TCTTCGTAACCGGTATGTGGATTAACATCACGTCGGACCGGACTCTGGTA
FD533177       --> TCTTCGTAACCGGTATGTGGATTAACATCACGTCGGACCGGACTCTGGT.
FD569538       --> TCTTCGTAACCGGTATGTGGATTAACATCACGTCGGACCGGACTCTAGTA
EW717466       --> ..................................................

               601    -    651
UN09908        --> CGGCTGAAGAAGGAGCACTACGGAGTTTATGTGATACCGAGAGGAGGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD574121       <-- CGGCTGAAGAAGGAGCACTACGGAGTTTATGTGATACCGAGAGGAGGCTT
FD529438       <-- CGGCTGAAGAAGGAGCACTACGGAGTTTATGTGATACCGAGAGGAGGCTT
EY927892       <-- CGGCTGAAGAGGGAGCACTACGGAGTTTATGTGATACCGAGAGGAGGCTT
FD573724       <-- CGGCTGAAGAAGGAGCACTACGGAGTTTATGTGATACCGAGAGGAGGCTT
FD570033       --> CGGCTGAAGAAGGAGCACTACGGAGTTTATGTGATACCGAGAGGAGGCTT
FD534629       --> CGGCTGAAGAAAGAGCACTACGGAGTTTATGTGATACCGAGAGGAGGCTT
EX750071       --> CGGCTGAAGAAGGAGCACTACGGAGTTTATGTGATACCGAGAGGAGGCTT
EY932091       --> CGGCTGAAGAGGGAGCACTACGGAGTTTATGTGATACCGAGAGGAGGCTT
FD533177       --> ..................................................
FD569538       --> CGGCTGAAGAAGGAGCACTACGGAGTTTATGTGATACCGAGAGGAGGCTT
EW717466       --> ..........................ggATGTGATACCGAGAGGAGGCTT

               651    -    701
UN09908        --> GTTCGAGTTTGTAAGCTGTCCTAATTACTTCGGAGAGGTGGTCGAGTGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD574121       <-- GTTCGAGTTTGTAAGCTGTCCTAATTACTTCGGAGAGGTGGTCGAGTGGT
FD529438       <-- GTTCGAGTTTGTAAGCTGTCCTAATTACTTCGGAGAGGTGGTCGAGTGGT
EY927892       <-- GTTCGAGTTTGTAAGCTGTCCTAATTACTTCGGAGAGGTGGTCGAGTGGT
FD573724       <-- GTTCGAGTTTGTAAGCTGTCCTAATTACTTCGGAGAGGTGGTCGAGTGGT
FD570033       --> GTTCGAGTTTGTAAGCTGTCCTAATTACTTCGGAGAGGTGGTCGAGTGGT
FD534629       --> GTTCGAGTTTGTAAGCTGTCCTAATTACTTCGGAGAGGTGGTCGAGTGGT
EX750071       --> GTTCGAGTTTATAAGCTGTCCTAATTACTTCGGAGAGGTGGTCGAGTGGT
EY932091       --> GTTCGAGTTTGTAAGCTGTCCTAATTACTTCGGAGAGGTGGTCGAGTGGT
FD533177       --> ..................................................
FD569538       --> GTTCGAGTTTGTAAGCTGTCCTAATTAC......................
EW717466       --> GTTCGAGTTTGTAAGCTGTCCTAATTACTTCGGAGAGGTGGTCGAGTGGT

               701    -    751
UN09908        --> TCGGCTGGGGTGTAATGACTTGGTCTTGGCCCGGGATTGGATTTTTTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD574121       <-- TCGGCTGGGGTGTAATGACTTGGTCTTGGCCCGGGATTGGATTTTTTCTG
FD529438       <-- TCGGCTGGGGTGTAATGACTTGGTCTTGGCCCGGGATTGGATTTTTTCTG
EY927892       <-- TCGGCTGGGGTGTAATGACTTGGTCTTGGCCCGGGATTGGATTTTTTCTG
FD573724       <-- TCGGCTGGGGTGTAATGACCTGGTCTTGGCCCGGGATTGGATTTTTTCTG
FD570033       --> TCGGCTGGGGTGTAATGACTTGGTCTTGGCCCGGGATTGGATTTTTTCTG
FD534629       --> TCGGCTGGGGTGTAATGACCTGGTCTTGGCCCGGGATTGGATTTTTTCTG
EX750071       --> TCGGCTGGGGTGTAATGACCTGGTCTTGGTCCGGGATTGGATTTTT-CTG
EY932091       --> TCGGCTGGGGTGTAATGACTTGGTCTTGGCCCGGGATTGGATTTTT-CTG
FD533177       --> ..................................................
FD569538       --> ..................................................
EW717466       --> TCGGCTGGGGTGTAATGACTTGGTCTTGGCCCGGGATTGGATTTTTTCTG

               751    -    801
UN09908        --> TACACGTGTTCCAACTTGATCCCGCGCGCACATGCGAGCCACATATGGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD574121       <-- TACACGTGTTCCAACTTGATCCCGCGCGCACATGCGAGCCACATATGGTA
FD529438       <-- TACACGTGTTCCAACTTGATCCCGCGCGCACATGCGAGCCACATATGGTA
EY927892       <-- TACACGTGTTCCAACTTGATCCCGCGCGCACATGCGAGCCACATATGGTA
FD573724       <-- TACACGTGTTCCAACTTGATCCCGCGCGCACATGCGAGCCACATATGGTA
FD570033       --> TACACGTGTTCCAACTTGATCC-GCGCGCACATGC...............
FD534629       --> TACACGTGTTCCAACTTGATCCCGCGCTCACATGCGAGCCACATATGGTA
EX750071       --> TACACGTGTTCCAACTTGATCCCGCGCGCACATGCGAGCCACATATGGTA
EY932091       --> TACACGTGTTCCAACTTGATCCCGCGCGCACATGCGAGCCACATATGGTA
FD533177       --> ..................................................
FD569538       --> ..................................................
EW717466       --> TACACGTGTTCCAACTTGATCCCGCGCGCACATGCGAGCCACATATGGTA

               801    -    851
UN09908        --> CAATGACAAGTTTAGAGCCGAGTACCCCAAGACTCGGAAAGCTGTTATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD574121       <-- CAATGACAAGTTTAGAGCCGAGTACCCCAAGACTCGGAAAGCTGTTATTC
FD529438       <-- CAATGACAAGTTTAGAGCCGAGTACCCCAAGACTCGGAAAGCTGTTATTC
EY927892       <-- CAATGACAAGTTTAGAGCCGAGTACCCCAAGACTCGGAAAGCTGTTATTC
FD573724       <-- CAATGACAAGTTTAGAGCCGAGTACCCCAAGACTCGGAAAGCTGTTATTC
FD570033       --> ..................................................
FD534629       --> CAATGACA-GTTTAGAGCCGAGTACCC--AGACTCGGAAAGCTGTa....
EX750071       --> CAATGACAAGTTTAGAGCCGAGTACC........................
EY932091       --> CA-TGACA-GTTTAGAGCCGAG............................
FD533177       --> ..................................................
FD569538       --> ..................................................
EW717466       --> CAATGACAAGTTTAGAGCCGAGTACCCCAAGACTCGGAAAGCTGTTATTC

               851    -    901
UN09908        --> CTTTTGTGTTCTGAAGAAAAGAAGAAACCATTTAACCCTTTTCTAATTT-
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD574121       <-- CTTTTGTGTTCTGAAGAAAAGAAGAAACCATTTAACCCTTTTCTAATTT-
FD529438       <-- CTTTTGTGTTCTGAAGAAAAGAAGAAACCATTTAACCCTTTTCTAATTT-
EY927892       <-- CTTTTGTGTTCTGAAGAAAAGAAGAAACCATTTAACCCTTTTCTAATTT-
FD573724       <-- CTTTTGTGTTCTGAAGAAAAGCAGAAACCATTTAACCATTTTCTAATTTT
FD570033       --> ..................................................
FD534629       --> ..................................................
EX750071       --> ..................................................
EY932091       --> ..................................................
FD533177       --> ..................................................
FD569538       --> ..................................................
EW717466       --> CTTTTGTGTTCTGAAGAAAAGAAGAAACCATTTAACCCTTTTCTAATTT-

               901    -    951
UN09908        --> AGCTTCGTCTAGATTCAGTAACCGGTTTAGTTCTCTTAATTTTGGTTTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD574121       <-- AGCTTCGTCTAGATTCAGTAACCGGTTTAGTTCTCTTAATTTTGGTTTAT
FD529438       <-- AGCTTCGTCTAGATTCAGTAACCGGTTTAGTTCTCTTAATTTTGGTTTAT
EY927892       <-- AGCTTCGTCTAGATTCAGTAACCGGTTTAGTTCTCTTAATTTTGGTTTAT
FD573724       <-- AGCTTCGTCTAGATTCTGTAACCGGTTTAGTTCTCTTAATGTTGGTTTAT
FD570033       --> ..................................................
FD534629       --> ..................................................
EX750071       --> ..................................................
EY932091       --> ..................................................
FD533177       --> ..................................................
FD569538       --> ..................................................
EW717466       --> AGCTTCGTCTAGATTCAGTAACCGGTTTAGTTCTCTTAATTTTGGTTTAT

               951    -   1001
UN09908        --> TGTTCCGGTTTATGTTGGTGTGTTCTTCAGTAGTGCAAAACTGTGTGTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD574121       <-- TGTTCCGGTTTATGTTGGTGTGTTCTTCAGTAGTGCAAAACTGTGTGTCA
FD529438       <-- TGTTCCGGTTTATGTTGGTGTGTTCTTCAGTAGTGCAAAACTGTGTGTCA
EY927892       <-- TGTTCCGGTTTATGTTGGTGTGTTCTTCAGTAGTGCAAAACTGTGTGTCA
FD573724       <-- TGTTCCGGTTTtagttctctct............................
FD570033       --> ..................................................
FD534629       --> ..................................................
EX750071       --> ..................................................
EY932091       --> ..................................................
FD533177       --> ..................................................
FD569538       --> ..................................................
EW717466       --> TGTTCCGGTTTATGTTGGTGTGTTCTTCAGTAGTGCAAAACTGTGTGTCA

               1001   -   1051
UN09908        --> TTAAGACAAAAGGTTTGAATAAAAGAGTGCCACGTCATAAGATCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD574121       <-- TTAAGACAAAAGGTTTGAATAAAAGAGTGCCACGTCATAAGATCAG
FD529438       <-- TTAAGACAAAAGGTTTGAATAAAAGAGTGCCACGTCATAAGATC..
EY927892       <-- TTAAGACAAAAGGTTTGAATAAAAGAGTGCCACGTCAT........
FD573724       <-- ..............................................
FD570033       --> ..............................................
FD534629       --> ..............................................
EX750071       --> ..............................................
EY932091       --> ..............................................
FD533177       --> ..............................................
FD569538       --> ..............................................
EW717466       --> TTAAGACAAAAGGTTTGAATAAAAGAGTGCCACGTC..........