1      -     51
UN09916        --> GGAAAACCACAAAGCTTCTTTTCACTTTCGCAATCACATAAAAACCTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758855       <-- GGAAAACCACAAAGCTTCTTCTCACTTTCGCAATCACATAAAAACCTTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX907958       <-- ..ggAACCACAAAGCTTCTTTTCACTTTCGCAATCACATAAAAACCTTTC  Raphanus sativus cv Rat-Tail Radish #3870
EX891805       <-- .ggggACCACAAAGCTTCTTCTCACTTTCGCAATCACATAAAAACCTTTC  Raphanus sativus var. oleiformis
FD553192       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX754551       --> GGAAAACCACAAAGCTTCTTCTCACTTTCGCAATCACATAAAAACCTTTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX772401       --> GGAAAACCACAAAGCTTCTTTTCACTTTCGCAATCACATAAAAACCTTTC  Raphanus raphanistrum subsp. landra
EX903994       --> ..ggAACCACAAAGCTTCTTTTCACTTTCGCAATCACATAAAAACCTTTC  Raphanus sativus cv Rat-Tail Radish #3870
EX773739       --> ...............TTCTTTTCACTTTCGCAATCACATAAAAACCTTTC  Raphanus raphanistrum subsp. landra
EX887724       --> ............................CGCAATCACATAAAAACCTTTC  Raphanus sativus var. oleiformis
FD563545       --> ..................................................  Raphanus sativus var. oleiformis
FD556988       --> ..................................................  Raphanus raphanistrum subsp. landra

               51     -    101
UN09916        --> TTTCTTTCT-TTCTATCCTATCCAAAAGAAGAAGATAAATCGTTTTTAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758855       <-- TTTCTTCCT-TTCTATCCTATCCAGAAGAAGAAGATAAATCGTTTTTAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX907958       <-- TTTCTTTCTATCCTATCCTATCCAAAAGAAGAAGATAAATCGTTTTTAAA  Raphanus sativus cv Rat-Tail Radish #3870
EX891805       <-- TTTCTTCCT-TTCTATCCTATCCAAAAAAAGAAGATAAATCGTTTTCAAA  Raphanus sativus var. oleiformis
FD553192       <-- ..........................................TTTTTAAA  Raphanus raphanistrum subsp. landra
EX754551       --> TTTCTTCCT-TTCTATCCTATCCAGAAGAAGAAGATAAATCGTTTTTAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX772401       --> TTTCTTTCT-TTCTATCC-----AAAAGAAGAAGATAAATCGTTTTTAAA  Raphanus raphanistrum subsp. landra
EX903994       --> TTTCTTTCTATCCTATCCTATCCAAAAGAAGAAGATAAATCGTTTTTAAA  Raphanus sativus cv Rat-Tail Radish #3870
EX773739       --> TTTCTTTCC-TTCTATCCTATCCAAAAGAAGAAGATAAATCGTTTTTAAA  Raphanus raphanistrum subsp. landra
EX887724       --> TTTCTTCCT-TTCTATCCTATCCAAAAAAAGAAGATAAATCGTTTTCAAA  Raphanus sativus var. oleiformis
FD563545       --> ....................................AAATCGTTTTCAAA  Raphanus sativus var. oleiformis
FD556988       --> ..........................................TTTTTAAA  Raphanus raphanistrum subsp. landra

               101    -    151
UN09916        --> ATGGCGAAGAAAGGAGGAGGAGGAGCAACAACACTCGCCGAGGACGCACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758855       <-- ATGGCGAAGAAAGGAGGAGG---AGCAACAACACTCGCCGAGGACGCACC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX907958       <-- ATGGCGAAGAAAGGAGGAGGAGGAGCAACAACACTCGCCGAGGACGCACC  Raphanus sativus cv Rat-Tail Radish #3870
EX891805       <-- ATGGCGAAGAAAGGAGGAGG---AGCAACAACACTCGCCGAGGACGCACC  Raphanus sativus var. oleiformis
FD553192       <-- ATGGCGAAGAAAGGAGGAGGAGGAGCAACAACACTCGCCGAGGACGCACC  Raphanus raphanistrum subsp. landra
EX754551       --> ATGGCGAAGAAAGGAGGAGGAG---CAACAACACTCGCCGAGGACGCACC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX772401       --> ATGGCGAAGAAAGGAGGAGGAGGAGCAACAACACTCGCCGAGGACGCACC  Raphanus raphanistrum subsp. landra
EX903994       --> ATGGCGAAGAAAGGAGGAGGAGGAGCAACAACACTCGCCGAGGACGCACC  Raphanus sativus cv Rat-Tail Radish #3870
EX773739       --> ATGGCGAAGAAAGGAGGAGGAGGAGCAACAACACTCGCCGAGGACGCACC  Raphanus raphanistrum subsp. landra
EX887724       --> ATGGCGAAGAAAGGAGGAGGAG---CAACAACACTCGCCGAGGACGCACC  Raphanus sativus var. oleiformis
FD563545       --> ATGGCGAAGAAAGGAGGAGGAG---CAACAACACTCGCCGAGGACGCACC  Raphanus sativus var. oleiformis
FD556988       --> ATGGCGAAGAAAGGAGGAGGAGGAGCAACAACACTCGCCGAGGACGCACC  Raphanus raphanistrum subsp. landra

               151    -    201
UN09916        --> ATGGCGTGTCTCCTCGGTAAAACCAGTACCTCGAATCAGCCGCTCACCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758855       <-- GTGGCGTGTCTCCTCGGTAAAACCAGTACCTCGAATCAGCCGCTCACCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX907958       <-- ATGGCGTGTCTCCTCGGTAAAACCAGTACCTCGAATCAGCCGCTCACCGG  Raphanus sativus cv Rat-Tail Radish #3870
EX891805       <-- GTGGCGTGTCTCCTCGGTAAAACCAGTACCTCGAATCAGCCGCTCACCGG  Raphanus sativus var. oleiformis
FD553192       <-- ATGGCGTGTCTCCTCGGTAAAACCAGTACCTCGAATCAGCCGCTCACCGG  Raphanus raphanistrum subsp. landra
EX754551       --> GTGGCGTGTCTCCTCGGTAAAACCAGTACCTCGAATCAGCCGCTCACCGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX772401       --> ATGGCGTGTCTCCTCGGTAAAACCAGTACCTCGAATCAGCCGCTCACCGG  Raphanus raphanistrum subsp. landra
EX903994       --> ATGGCGTGTCTCCTCGGTAAAACCAGTACCTCGAATCAGCCGCTCACCGG  Raphanus sativus cv Rat-Tail Radish #3870
EX773739       --> ATGGCGTGTCTCCTCGGTAAAACCAGTACCTCGAATCAGCCGCTCACCGG  Raphanus raphanistrum subsp. landra
EX887724       --> GTGGCGTGTCTCCTCGGTAAAACCAGTACCTCGAATCAGCCGCTCACCGG  Raphanus sativus var. oleiformis
FD563545       --> GTGGCGTGTCTCCTCGGTAAAACCAGCACCTCGAATCAGCCGCTCACCGG  Raphanus sativus var. oleiformis
FD556988       --> ATGGCGTGTCTCCTCGGTAAAACCAGTACCTCGAATCAGCCGCTCACCGG  Raphanus raphanistrum subsp. landra

               201    -    251
UN09916        --> TTCTCTCCATCTCTCAAAGTCCAGAGACCGATTACGCCATTGCCGTCATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758855       <-- TTCTCTCCATCTCTCAAAGTCCAGAGACCGATTACGCCATTGCCGTCATG
EX907958       <-- TTCTCTCCATCTCTCAAAGTCCAGAGACCGATTACGCCATTGCCGTCATG
EX891805       <-- TTCTCTCCATCTCTCAAACCCCAGAGACCGATTACGCCATTGCCGTCATG
FD553192       <-- TTCTCTCCATCTCTCAAAGTCCAGAGACCGATTACGCCATTGCCGTCATG
EX754551       --> TTCTCTCCATCTCTCAAAGTCCAGAGACCGATTACGCCATTGCCGTCATG
EX772401       --> TTCTCTCCATCTCTCAAAGTCCAGAGACCGATTACGCCATTGCCGTCATG
EX903994       --> TTCTCTCCATCTCTCAAAGTCCAGAGACCGATTACGCCATTGCCGTCATG
EX773739       --> TTCTCTCCATCTCTCAAAGTCCAGAGACCGATTACGCCATTGCCGTCATG
EX887724       --> TTCTCTCCATCTCTCAAACCCCAGAGACCGATTACGCCATTGCCGTCATG
FD563545       --> TTCTCTCCATCTCTCAAACCCCAGAGACCGATTACGCCATTGCCGTCATG
FD556988       --> TTCTCTCCATCTCTCAAAGTCCAGAGACCGATTACGCCATTGCCGTCATG

               251    -    301
UN09916        --> AAGCATCCGAATCCAGTGGGAGGTGGTTTGGCGATGGAAGCAGTGCTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758855       <-- AAGCATCCGAATCCAGTGGGAGGTGGTTTGGCGATGGAAGCAGTGCTTGA
EX907958       <-- AAGCATCCGAATCCAGTGGGAGGTGGTTTGGCGATGGAAGCAGTGCTTGA
EX891805       <-- AAGCATCCGAATCCAGTGGGAGGTGGTTTGGCGATGGAAGCAGTGCTCGA
FD553192       <-- AAGCATCCGAATCCAGTGGGAGGTGGTTTGTCGATGGAAGCAGTGCTTGA
EX754551       --> AAGCATCCGAATCCAGTGGGAGGTGGTTTGGCGATGGAAGCAGTGCTTGA
EX772401       --> AAGCATCCGAATCCAGTGGGAGGTGGTTTGGCGATGGAAGCAGTGCTTGA
EX903994       --> AAGCATCCGAATCCAGTGGGAGGTGGTTTGGCGATGGAAGCAGTGCTTGA
EX773739       --> AAGCATCCGAATCCAGTGGGAGGTGGTTTGGCGATGGAAGCAGTGCTTGA
EX887724       --> AAGCATCCGAATCCAGTGGGAGGTGGTTTGGCGATGGAAGCAGTGCTCGA
FD563545       --> AAGCATCCGAATCCAGTGGGAGGTGGTTTGGCGATGGAAGCAGTGCTCGA
FD556988       --> AAGCATCCGAATCCAGTGGGAGGTGGTTTGTCGATGGAAGCAGTGCTTGA

               301    -    351
UN09916        --> ATCTGCAGGACCTGAATGCGTTGTTCCTGGTCAAGTCACGCCTCTTCGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758855       <-- ATCTGCAGGACCTGAATGCGTTGTTCCTGGTCAAGTCACGCCTCTTCGTC
EX907958       <-- ATCTGCAGGACCTGAATGCGTTGTTCCTGGTCAAGTCACGCCTCTTCGTC
EX891805       <-- ATCTGCAGGGCCTGAATGCGTTGTTCCTGGTCAAGTCACGCCTCTTCGTC
FD553192       <-- ATCTGCAGTACCTGAATGCGTTGTTCCTGGTCTAGTCACGCCTCTTCGTC
EX754551       --> ATCTGCAGGACCTGAATGCGTTGTTCCTGGTCAAGTCACGCCTCTTCGTC
EX772401       --> ATCTGCAGGACCTGAATGCGTTGTTCCTGGTCAAGTCACGCCTCTTCGTC
EX903994       --> ATCTGCAGGACCTGAATGCGTTGTTCCTGGTCAAGTCACGCCTCTTCGTC
EX773739       --> ATCTGCAGGACCTGAATGCGTTGTTCCTGGCCAAGTCACGCCTCTTCGTC
EX887724       --> ATCTGCAGGGCCTGAATGCGTTGTTCCTGGTCAAGTCACGCCTCTTCGTC
FD563545       --> ATCTGCAGGACCTGAATGCGTTGTTCCTGGTCAAGTCACGCCTCTTCGTC
FD556988       --> ATCTGCAGTACCTGAATGCGTTGTTCCTGGTCTAGTCACGCCTCTTCGTC

               351    -    401
UN09916        --> TTCTTGGTGTTAAGGTGTGGCCTGTTGAAGTTGATCTCAAGTTCCTGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758855       <-- TTCTTGGTGTTAAGGTGTGGCCTGTTGAGGTTGATCTCAAGTTCCTGGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX907958       <-- TTCTTGGTGTTAAGGTGTGGCCTGTTGAAGTTGATCTCAAGTTCCTGGAA  Raphanus sativus cv Rat-Tail Radish #3870
EX891805       <-- TTCTTGGTGTTAAGGTGTGGCCTGTTGAAGTTGATCTCAAGTTCCTGGAA  Raphanus sativus var. oleiformis
FD553192       <-- TTCTTGGTGTTAAGTTGTGGCCTGTTGAAGTTGATCTCAAGTTCCTGGAA  Raphanus raphanistrum subsp. landra
EX754551       --> TTCTTGGTGTTAAGGTGTGGCCTGTTGAGGTTGATCTCAAGTTCCTGGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX772401       --> TTCTTGGTGTTAAGTTGTGGCCTGTTGAAGTTGATCTCAAGTTCCTGGAA  Raphanus raphanistrum subsp. landra
EX903994       --> TTCTTGGTGTTAAGGTGTGGCCTGTTGAAGTTGATCTCAAGTTCCTGGAA  Raphanus sativus cv Rat-Tail Radish #3870
EX773739       --> TTCTTGGTGTTAAGTTGTGGCCTGTTGAAGTTGATCTCAAGTTCCTGGAA  Raphanus raphanistrum subsp. landra
EX887724       --> TTCTTGGTGTTAAGGTGTGGCCTGTTGAAGTTGATCTCAAGTTCCTGGAA  Raphanus sativus var. oleiformis
FD563545       --> TTCTTGGTGTTAAGGTGTGGCCTGTTGAAGTTGATCTCAAGTTCCTGGAA  Raphanus sativus var. oleiformis
FD556988       --> TTCTTGGTGTTAAGTTGTGGCCTGTTGAAGTTGATCTCAAGTTCCTGGAA  Raphanus raphanistrum subsp. landra

               401    -    451
UN09916        --> CCAGTGGGGAAAGAGCTTAAGATGCTTGGGAAGTTCATGGATAATGCTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758855       <-- CCAGTGGGGAAAGAGCTTAAGATGCTTGGGAAGTTCATGGATAATGCTGT
EX907958       <-- CCAGTGGGGAAAGAGCTTAAGATGCTTGGGAAGTTCATGGATAATGCTGT
EX891805       <-- CCAGTGGGGAAAGAGCTTA--ATGCTTGGGAAGTTCATGGATAATGCTGT
FD553192       <-- CCAGTGGGGAAAGAGCTTAAGATGCTTGGGAAGTTCATGGATAATGCTGT
EX754551       --> CCAGTGGGGAAAGAGCTTAAGATGCTTGGGAAGTTCATGGATAATGCTGT
EX772401       --> CCAGTGGGGAAAGAGCTTAAGATGCTTGGGAAGTTCATGGATAATGCTGT
EX903994       --> CCAGTGGGGAAAGAGCTTAAGATGCTTGGGAAGTTCATGGATAATGCTGT
EX773739       --> CCAGTGGGGAAAGAGCTTAAGATGCTTGGGAAGTTCATGGATAATGCTGT
EX887724       --> CCAGTGGGGAAAGAGCTTAA--TGCTTGGGAAGTTCATGGATAATGCTGT
FD563545       --> CCATTGGGGAAAGAGCTTAAGATGCTTGGGAAGTTCATGGATAATGCTGT
FD556988       --> CCAGTGGGGAAAGAGCTTAAGATGCTTGGGAAGTTCATGGATAATGCTGT

               451    -    501
UN09916        --> CGACCTGATGAATAAGTCTTTTATCGACCGTTAAGCACCATGGAAAAGG-
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758855       <-- CGACCTGATGAATAAGTCTTTTATCGACCGTTAAGCACCATGTAAAAGGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX907958       <-- CGACCTTATGAATAAGTCTTTTATCGACCGTTAAGCACCATGGAAAAGG-  Raphanus sativus cv Rat-Tail Radish #3870
EX891805       <-- CGACCTTATGAATAAGTCTTTTATCGACCGTTAAGCACCATGGAAAAGG-  Raphanus sativus var. oleiformis
FD553192       <-- CGACCTGATGAATAAGTCTTTTATCGACCGTTCAGCACCATGGAAAAGG-  Raphanus raphanistrum subsp. landra
EX754551       --> CGACCTGATGAATAAGTCTTTTATCGACCGTTAAGCACCATGTAAAAGGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX772401       --> CGACCTGATGAATAAGTCTTTTATCGACCGTTAAGCACCATGGAAAAGG-  Raphanus raphanistrum subsp. landra
EX903994       --> CGACCTTATGAATAAGTCTTTTATCGACCGTTAAGCACCATGGAAAAGG-  Raphanus sativus cv Rat-Tail Radish #3870
EX773739       --> CGACCTGATGAATAAGTCTTTTATCGACCGTTAAGCACCATGGAAAAGG-  Raphanus raphanistrum subsp. landra
EX887724       --> CGACCTTATGAATAAGTCTTTTATCGACCGTTAAGCACCATGGAAAAGG-  Raphanus sativus var. oleiformis
FD563545       --> CGACCTTATGAATAAGTCTTTTATCGACCGTTAAGCACCATGGAAAAGG-  Raphanus sativus var. oleiformis
FD556988       --> CGACCTGATGAATAAGTCTTTTATCGACCGTTCAGCACCATGGAAAAGG-  Raphanus raphanistrum subsp. landra

               501    -    551
UN09916        --> CGCTAAGGTATACGGCTAGAGTTTTGGAATGGGGAAC-TTATAACAGGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758855       <-- CGCTAAGGTATACGGCTAGAGTTTTGGAATGGGGAAC-TTATAACAGGCA
EX907958       <-- CGCTAAGGTATACGGCTAGAGTTTTGGAATGGGGAACATTATAACAGGCG
EX891805       <-- CGCTAAGGTATACGGCTAGAGTTTTGGAATGGGGAAC-TTTTAACAGGCA
FD553192       <-- CGCTAAGGTATACGGCTAGAGTTTTGGAATGGGGAAC-TTATAACAGGCA
EX754551       --> CGCTAAGGTATACGGCTAGAGTTTTGGAATGGGGAAC-TTATAACAGGCA
EX772401       --> CGCTAAGGTATACGGCTAGAGTTTTGGAATGGGGAAC-TTATAACAGGCA
EX903994       --> CGCTAAGGTATACGGCTAGAGTTTTGGAATGGGGAACATTATAACAGGCG
EX773739       --> CGCTAAGGTATACGGCTAGAGTTTTGGAATGGGGAAC-TTATAACAGGCA
EX887724       --> CGCTAAGGTATACGGCTAGAGTTTTGGAATGGGGAAC-TTTTAACAGGCA
FD563545       --> CGCTAAGGTATACGGCTAGAGTTTTGGAATGGGGAAC-TTTTAACAGGCA
FD556988       --> CGCTAAGGTATACGGCTAGAGTTTTGGAATGGGGAAC-TTATAACAGGCA

               551    -    601
UN09916        --> GAGAAAGATATGATCTGAGAGCAAAGTTGAATATGGTGTGTGTGTGTGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758855       <-- GAGAAAGATATGATCTGAGAGCAAAGTTGAATATGGTGTGTGTGTGTGTC
EX907958       <-- GAGAAAGATATGATCTGAGAGCAAAGTTGAATATGGTGTGTGTGTG--TC
EX891805       <-- GAGAAAGATATGATCTGAGAGCAAAGTTGAATATGGTGTGTGTGTGTGTC
FD553192       <-- GAGAAAGATATGATCTGAGAGCAAAGTTGAATATGGTGTGTGTGTGTGTC
EX754551       --> GAGAAAGATATGATCTGAGAGCAAAGTTGAATATGGTGTGTGTGTGTGTC
EX772401       --> GAGAAAGATATGATCTGAGAGCAAAGTTGAATATGGTGTGTGTGTGTGTC
EX903994       --> GAGAAAGATATGATCTGAGAGCAAAGTTGAATATGGTGTGTGTGTGT--C
EX773739       --> GAGAAAGATATGATCTGAGAGCAAAGTTGAATATGGTGTGTGTGTGT--C
EX887724       --> GAGAAAGATATGATCTGAGAGCAAAGTTGAATATGGTGTGTGTGTGTGTC
FD563545       --> GAGAAAGATATGATCTGAGAGCAAAGTTGAATATGGTGTGTGTGTGTGTC
FD556988       --> GAGAAAGATATGATCTGAGAGCAAAGTTGAATATGGTGTGTGTGTGTGTC

               601    -    651
UN09916        --> AGTGTATAGAGGATTATCTCCTTTCAAATATTATTACAGACAAAAATCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758855       <-- AGTGTATAGAGGATTATCTCCTTTCAAATATTATTACAGACAAAAATCTA
EX907958       <-- AGTGTATAGAGGATTATCTCCTTTCAAATATTATTACAGACAAAAATCTA
EX891805       <-- AGTGTATAGAGGATTATCTCCTTTCAAATATTATTACAGACAAAAATCTA
FD553192       <-- AGTGTATAGAGGATTATCTCCTTTCAAATATTATTACAGACAAAAATCTA
EX754551       --> AGTGTATAGAGGATTATCTCCTTTCAA-TATTATTACAGACAAAA-TCTA
EX772401       --> AGTGTATAGAGGATTATCTCCTTTCAA-TATTATTACAGACAAAA-TCTA
EX903994       --> AGTGTATAGAGGATTATCTCCTTTCAAATATTATTACAGACAAAAATCTA
EX773739       --> AGTGTATAGAGGATTATCTCCTTTCAAATATTATTACAGACAAAA-TCTA
EX887724       --> AGTGTATAGAGGATTATCTCCTTTCAAATATTATTACAGACAAAAATCTA
FD563545       --> AGTGTATAGAGGATTATCTCCTTTCAAATATTATTACAGACAAAAA....
FD556988       --> AGTGTATAGAGGATTATCTCCTTTCAAATATTATTACAGACAAAAA....

               651    -    701
UN09916        --> TATGCTATCAAATCATCATTGGTTTGAATTAA-GGATATGCTTAAACTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX758855       <-- TATGCTATCAAATCATCATTGGTTTGAATTAA-GGATATGCTTAAACTTT
EX907958       <-- TATGCTATCAAATCATCATTGGTTTGAATTAA-GGATATGCTTAAACTTT
EX891805       <-- TATTCTATCAAATCATCATTGGTTTGAATTAA-GGATATGCTTAAACc..
FD553192       <-- TATGCTATCAAATCATCATTGGTTTGAATT....................
EX754551       --> TATGCTATCAA-TCATCATTGGTTTGAAT.....................
EX772401       --> TATGCTATCAA-TCATCATTGGTTTG........................
EX903994       --> TATGCTATCAAATCATCATTGGTTTGA-TTAA-GGATATGCTTAAACTTT
EX773739       --> TATGCTATCAAtca....................................
EX887724       --> TATTCTATCAAATCATCATTGGTTTGAATTAAAGGATATGCTTAAACc..
FD563545       --> ..................................................
FD556988       --> ..................................................

               701    -    751
UN09916        --> CTTCCAGTGTT
                   ~~~~~~~~~~~
EX758855       <-- CTTCCAGTGTT
EX907958       <-- C..........
EX891805       <-- ...........
FD553192       <-- ...........
EX754551       --> ...........
EX772401       --> ...........
EX903994       --> Caaaaaaaa..
EX773739       --> ...........
EX887724       --> ...........
FD563545       --> ...........
FD556988       --> ...........