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Alignment for radish unigene UN09931

               1      -     51
UN09931        --> GATTAAAGCAAAGATGCAATAAACTCCAAACAGAATCGTCAAAAGGGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923751       <-- ..................................................
EY924102       <-- ..................................................
EY915976       <-- ..................................................
EY897477       <-- ..................................................
EY939125       <-- ..................................................
FD542047       <-- ..................................................
EY919812       --> GATTAAAGCAAAGATGCAATAAACTCCAAACAGAATCGTCAAAAGGAAGA
FD977739       --> ....................................CGTCAAAAGGGAGA
FD538204       --> .........................................AAAGGGAGA
EY893788       --> .............................................gaAGA
FD564907       --> ..................................................

               51     -    101
UN09931        --> TGAACGTATTTAAAAGCAGAGATCATCAGTTCCATCTCCATTCAT----A
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923751       <-- ............AAAGCAGAGATCATCAGTTCCATCTCCATTCATTCATA
EY924102       <-- ..................................................
EY915976       <-- ..................................................
EY897477       <-- ..................................................
EY939125       <-- ..................................................
FD542047       <-- ..................................................
EY919812       --> TGAACGTATTTAACAGCAGAGATCATCAGTTCCATCTCCATTCAT----A
FD977739       --> TGAACGTATTTAAAAGCAGAGATCGTCAGTTCCATCTCCATTCATTCATA
FD538204       --> TGAACGTATTTAAAAGCAGAGATCATCAGTTCCATCTCCATTCAT----A
EY893788       --> TGAACGTATTTAACAGCAGAGATCATCAGTTCCATCTCCATTCAT----A
FD564907       --> ..................................................

               101    -    151
UN09931        --> TCCAAGAAACAAAAACCCCC-AAAAAGTAATTTGCATCCCAAGAATAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923751       <-- TCCAAGAAACAAAAACCCCCCAAAAAGTAATTTGCATCCCAAGAATAAAA
EY924102       <-- ..................................................
EY915976       <-- ..................................................
EY897477       <-- ..................................................
EY939125       <-- ..................................................
FD542047       <-- ..................................................
EY919812       --> TCCAAGAAACAAAAACCCCC-AAAAAGTAATTTGCATCCCAAGAATAAAA
FD977739       --> TCCAAGAAACAAAAACCCCCCAAAAAGTAATTTGCATCCCAAGAATAAAA
FD538204       --> TCCAAGAAACAAAAACCCCC-AAAAAGTAATTTGCACCCCAAGAATAAAA
EY893788       --> TCCAAGAAACAAAAACCCCC-AAAAAGTAATTTGCATCCCAAGAATAAAA
FD564907       --> ..................................................

               151    -    201
UN09931        --> AAGCACAGACCGATTGTTAATAAAGAAACCAAAGTTTTTTCTTAGGGTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923751       <-- AAGCACAGACCGATTGTTAATAAAGAAACCAAAGTTTTTTCTTAGGGTAG
EY924102       <-- ...................................TTTTTCTTAGGGTAG
EY915976       <-- ..................................................
EY897477       <-- ..................................................
EY939125       <-- ..................................................
FD542047       <-- ..................................................
EY919812       --> AAGCACAGACCGATTGTTAATAAAGAAACCAAAGTTTTTTCTTAGGGTAG
FD977739       --> AAGCACAGACCGATTGTTAATAAAGAAACCAAAGTTTTTTCTTAGGGTAG
FD538204       --> AAGCACAGACCGATTGTTAATAAAGAAACCAAAGTTTTTTCTTAGGGTAG
EY893788       --> AAGCACAGACCGATTGTTAATAAAGAAACCAAAGTTTTTTCTTAGGGTAG
FD564907       --> ..................................................

               201    -    251
UN09931        --> AAGTATCCAAATAAGATTTTCATATACAAGCAGAGAAGAGCAGAGAGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923751       <-- AAGTATCCAAATAAGATTTTCATATACAAGCAGAGAAGAGCAGAGAGATG
EY924102       <-- AAGTATCCAAATAAGATTTTCATATACAAGCAGAGAAGAGCAGAGAGATG
EY915976       <-- ..................................................
EY897477       <-- ..................................................
EY939125       <-- ..................................................
FD542047       <-- ..................................................
EY919812       --> AAGTATCCAAATAAGATTTTCATATACAAGCAGAAAAGAGCAGAAAGATG
FD977739       --> AAGTATCCAAATAAGATTTTCATATACAAGCAGAGAAGAGCAGAGAGATG
FD538204       --> AAGTATCCAAATAAGATTTTCATATACAAGCAGAGAAGAGCAGAGAGATG
EY893788       --> AAGTATCCAAATAAGATTTTCATATACAAGCAGAGAAGAGCAGAGAGATG
FD564907       --> ..................................................

               251    -    301
UN09931        --> CTTCGTTCTTTCATGAGCCAGCAAACCACCTCC-ATAGTTGTTTTTTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923751       <-- CTTCGTTCTTTCATGAGCCCGCAAACCACCTCC-ATAGTTGTTTTTTCTT
EY924102       <-- CTTCGTTCTTTCATGAGCCAGCAAACCACCTCCCATAGTTGTTTTT-CTT
EY915976       <-- ..............................................TCTT
EY897477       <-- ..................................................
EY939125       <-- ..................................................
FD542047       <-- ..................................................
EY919812       --> CTTCGTTCTTTCATGAGCCAGCAAACCACCTCC-ATAGTTGTTTTTTCTT
FD977739       --> CTTCGTTCTTTCATGAGCCCGCAAACCACCTCC-ATAGTTGTTTTTTCTT
FD538204       --> CTTCGTTCTTTCATGAGCCAGCAAACCACCTCC-ATAGTTGTTTTTTCTT
EY893788       --> CTTCGTTCTTTCATGAGCCAGCAAACCACCTCC-ATAGTTGTTTTTTCTT
FD564907       --> ..................................................

               301    -    351
UN09931        --> TGCCTCTAAGCCAAGTACCTAAACATGTTAGGGTTCTCCTTGTCCCTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923751       <-- TGTCTCTAAGCCAAGTACCTAAACATGTTAGGGTTCTCCTTGTCCCTCTC
EY924102       <-- TGCCTCTAAGCCAAGTACCTAAACATGTTAGGGTTCTCCTTGTCCCTCTC
EY915976       <-- TGCCTCTAAACCAAGTACCTAAACATGTTAGGGTTCTCCTTGTCCCTCTC
EY897477       <-- .......................................TTGTCCCTCTC
EY939125       <-- ..................................................
FD542047       <-- ..................................................
EY919812       --> TGCCTCTAAGCCAAGTACCTAAACATGTTAGGGTTCTCCTTGTCCCTCTC
FD977739       --> TGTCTCTAAGCCAAGTACCTAAACATGTTAGGGTTCTCCTTGTCCCTCTC
FD538204       --> TGCCTCTAAGCCAAGTACCTAAACATGTTAGGGTTCTCCTTGTCCCTCTC
EY893788       --> TGCCTCTAAGCCAAGTACCTAAACATGTTAGGGTTCTCCTTGTCCCTCTC
FD564907       --> ..................................................

               351    -    401
UN09931        --> CAAATAATCCCTCGTAATTAGATCCTCCATACGCTTCTTGATCGCTTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923751       <-- CAAATAATCCCTCGTAATTAGATCCTCCATACGCTTCTTGATCGCTTTGA
EY924102       <-- CAAATAATCCCTCGTAATTAGATCCTCCATACGCTTCTTGATCGCTTTGA
EY915976       <-- CAAATAATCCCTCGTAATTAGATCCTCCATACGCTTCTTGATCGCTTTGA
EY897477       <-- CAAATAATCCCTCGTAATTAGATCCTCCATACGCT-CTTGATCGCTTTGA
EY939125       <-- ..................................................
FD542047       <-- ..................................................
EY919812       --> CAAATAATCCCTCGTAATTAGATCCTCCATACGCTTCTTGATCGCTTTGA
FD977739       --> CAAATAATCCCTCGTAATTAGATCCTCCATACGCTTCTTGATCGCTTTGA
FD538204       --> CAAATAATCCCTCGTAATTAGATCCTCCATACGCTTCTTGATCGCTTTGA
EY893788       --> CAAATAATCCCTCGTAATTAGATCCTCCATACGCTTCTTGATCGCTTTGA
FD564907       --> ..................................................

               401    -    451
UN09931        --> TATCAGGCTTGAACATTCGGCTCAGTTGCTCAACGCACTCAGAGACGAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923751       <-- TATCAGGCTTGAACATTCGGCTCAGTTGCTCAACGCACTCAGAGACGAGT
EY924102       <-- TATCAGGCTTGAACATTCGGCTCAGTTGCTCAACGCACTCAGAGACGAGT
EY915976       <-- TATCAGGCTTGAACATTCGGCTCAGTTGCTCAACGCACTCAGAGACGAGT
EY897477       <-- TATCAGGCTTGAACATTCGGCTCAGTTGCTCAACGCACTCAGAGACGAGT
EY939125       <-- ..................................................
FD542047       <-- ..................................................
EY919812       --> TATCAGGCTTGAACATTCGGCTCAGTTGCTCAACGCACTCAGAAACGAGT
FD977739       --> TATCAGGCTTGAACATTCGGCTCAGTTGCTCAACGCACTCAGAGACGAGT
FD538204       --> TATCAGGCTTG--GATTCGGCTCAGTTGCTCAACGCACTCAGAGACGAGT
EY893788       --> TATCAGGCTTGAACATTCGGCTCAGTTGCTCAACGCACTCAGAGACGAGT
FD564907       --> ...............................................AGT

               451    -    501
UN09931        --> TGTTGATGTCCCAATACTTTCCTGCTCTTCATGATCCTAACAATGGCAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923751       <-- TGTTGATGTCCCAATACTTTCCTGCTCTTCATGATCCTAACAATGGCAGC
EY924102       <-- TGTTGATGTCCCAATACTTTCCTGCTCTTCATGATCCTAACAATGGCAGC
EY915976       <-- TGTTGATGTCCCAATACTTTCCTGCTCTTCATGATCCTAACAATGGCAGC
EY897477       <-- TGTTGATGTCCCAATACTTTCGTGCTCTTCATGATCCTAACAATGGCAGC
EY939125       <-- ..................................................
FD542047       <-- ..................................................
EY919812       --> TGTTGATGTCCCAATACTTTCCTGCTCTTCATGATCCTAACAATGGCAGC
FD977739       --> TGTTGATGTCCCAATACTTTCCTGCTCTTCATGATCCTAACAATGGCAGC
FD538204       --> TGTTGATGTCCCAATACTTTCCTGCTCTTCATGATCCTAACAATGGCAGC
EY893788       --> TGTTGATGTCCCAATACTTTCCTGCTCTTCATGATCCTAACAATGGCAGC
FD564907       --> TGTTGATGTCCCAATACTTTCCGGCTCTTCATGATCCTAACAATGGCAGC

               501    -    551
UN09931        --> ATCAATCGCATAGCGTCTGTCTTTGTCCACATCTTCCACAACCTTCTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923751       <-- ATCAATCGCATAGCGTCTGTCTTTGTCCACATCTTCCACAACCTTCTTCC
EY924102       <-- ATCAATCGCATAGCGTCTGTCTTTGTCCGCATCTTCCACAACCTTCTTCC
EY915976       <-- ATCAATCGCATAGCGTCTGTCTTTGTCCACATCTTCCACAACCTTCTTCC
EY897477       <-- ATCAATCGCATAGCGTCTGTCTTTGTCCACATCTTCCACAACCTTCTTCC
EY939125       <-- ..................................................
FD542047       <-- ..................................................
EY919812       --> ATCAATCGCATAGCGTCTGTCTTTGTCCGCATCTTCCACAACCTTCTTCC
FD977739       --> ATCAATCGCATAGCGTCTGTCTTTGTCCACATCTTCCACAACCTTCTTCC
FD538204       --> ATCAATCGCATAGCGTCTGTCTTTGTCCACATCTTCCACAACCTTCTTCC
EY893788       --> ATCAATCGCATAGCGTCTGTCTTTGTCCACATCTTCCACAACCTTCTTCC
FD564907       --> ATCAATCGCATAGCGTCTGTCTTTGTCCACATCTTCCACAACCTTCTTCC

               551    -    601
UN09931        --> TTTCATCAACAGGAGGGAGAGGGATCTTGATTCTGCGCATTCTGTCGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923751       <-- TTTCATCAACAGGAGGGAGAGGGATCTTGATTCTGCGCc...........  Raphanus raphanistrum subsp. landra
EY924102       <-- TTTCATCAACAGGAGGGAGAGGGATCTTGATTCTGCGCATTCTGTCTGTG  Raphanus raphanistrum subsp. landra
EY915976       <-- TTTCATCAACAGGAGGGAGAGGGATCTTGATTCTGCGCATTCTGTCGGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY897477       <-- TTTCATCAACAGGAGGGAGAGGGATCTTGATTCTGCGCATTCTGTCTGTG  Raphanus raphanistrum subsp. maritimus
EY939125       <-- ................GAGAGGGATCTTGATTCTGCGCATTCTGTCGGTG  Raphanus sativus cv Early Scarlet Globe
FD542047       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY919812       --> TTTCATCAACAGGAGGGAGAGGGATCTTGATTCTGCGCATTCTGTCTGTG  Raphanus raphanistrum subsp. landra
FD977739       --> TTTCATCAACAGGAGGGAGAGGGATATTGATTCTGCGCATTCTGTCGGTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD538204       --> TTTCATCAACAGGAGGGAGAGGGATCTTGATTCTGCGCATTCTGTCGGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY893788       --> TTTCATCAACAGGAGGGAGAGGGATCTTGATTCTGCGCATTCTGTCTGTG  Raphanus raphanistrum subsp. maritimus
FD564907       --> TTTCATCAACAGGAGGGAGAGGGATCTTGATTCTGCGCATTCTGTCGGTG  Raphanus sativus var. oleiformis

               601    -    651
UN09931        --> AATTTGGCATTGAATTCAAATGAATCAGTCTGCGTAACGGTCTTTGTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923751       <-- ..................................................
EY924102       <-- AATTTGGCATTGAATTCAAATGAATCAGTCTGCGTAACGGTCTTTGTGCT
EY915976       <-- AATTTGGCATTGAATTCAAATGAATCAGTCTGCGTAACAGTCTTTGTGCT
EY897477       <-- AATTTGGCATTGAATTCAAATGAATCAGTCTGCGTAACGGTCTTTGTGCT
EY939125       <-- AATTTGGCATTGAATTCAAATGAATCAGTCTGCGTAACGGTCTTTGTGCT
FD542047       <-- ..................................................
EY919812       --> AATTTGGCATTGAATTCAAATGAATCAGTCTGCGTAACGGTCTTTGTGCT
FD977739       --> AATTTGGCATTGAATTCAAATGAATCAGTCTGCGTAACGGTCTTTGTGCT
FD538204       --> AATTTGGCATTGAATTCAAATGAATCAGTCTGCGTA..............
EY893788       --> AATTTGGCATTGAATTCAAATGAATCAGTCTGCGTAACGGTCTTTGTGCT
FD564907       --> AATTTGGCATTGAATTCAAATGAATCAGTCTGCGTAACAGTCTTTGTGCT

               651    -    701
UN09931        --> TGGCTCCTTGAGAAGGATCTTGTACCTAGCACATGACAGGGAATGAAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923751       <-- ..................................................
EY924102       <-- TGGCTCCTTGAGAAGGATCTTGTACCTAGCACATGACAGGGAATGAAGCA
EY915976       <-- TGGCTCCTTGAGAAGGATCTTGTACCTAGCACATGACAGGGAATGAAGCA
EY897477       <-- TGGCTCCTTGAGAAGGATCTTGTACCTAGCACATGACAGGGAATGAAGCA
EY939125       <-- TGGCTCCTTGAGAAGGATCTTGTACCTAGCACATGACAGGGAATGAAGCA
FD542047       <-- ..................................................
EY919812       --> TGGCTCCTTGAGAAGGATCTTGTACCTAGCACATGACAGGGAATGAAGCA
FD977739       --> TGGCTCCTTGAGAAGGATCTTGTACCTAGCACATGACAGGGAATGAAGCA
FD538204       --> ..................................................
EY893788       --> TGGCTCCTTGAGAAGGATCTTGTACCTAGCACATGACAGGGAATGAAGCA
FD564907       --> TGGCTCCTTGAAAAGGATCTTGTACCTAGCACATGACAGGGAATGAAGCA

               701    -    751
UN09931        --> ACCTCACTAGATCTTCGTGGCTTAGGTTCAGTTGAGTTAGGATATCGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923751       <-- ..................................................
EY924102       <-- ACCTCACTAGATCTTCGTGGCTTAGGTTCAGTTGAGTTAGGATATCGTTG
EY915976       <-- ACCTCACTAGATCTTCGTGGCTTAGGTTCAGTTGAGTTAGGATATCGTTG
EY897477       <-- ACCTCACTAGATCTTCGTGGCTTAGGTTCAGTTGAGTTAGGATATCGTTG
EY939125       <-- ACCTCACTAGATCTTCGTGGCTTAGGTTCAGTTGAGTTAGGATATCGCTG
FD542047       <-- ............tcTCGTGGCTTAGGTTCAGTTGAGTTAGGATATCGTTG
EY919812       --> ACCTCACTAGATCTTCGTGG..............................
FD977739       --> ACCTCACTAGATCTTCGTGGCTTAGGTTCAGTTGAGTTAGGATATCGTTG
FD538204       --> ..................................................
EY893788       --> ACCTCACTAGATCTTCGTGGC.............................
FD564907       --> ACCTCACTAAATCTTCGTGGCTTAGGTTCAGTTGAGTTAGGATAT.....

               751    -    801
UN09931        --> TAGCTCAATTTGTCTGTGGTGTTGAACAGCAGAAGAACAGCAGCCTGGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923751       <-- ..................................................
EY924102       <-- TAGCTCAATTTGTCTATGGTGTTGAACAGCAGAAGAACAGCAGCCTGGTA
EY915976       <-- TAGCTCAATTTGTCTGTTGTGTTGAACAGCAGAAGAACAGCAGCCTGGTA
EY897477       <-- TAGCTCAATTTGTCTGTGGTGTTGAACAGCAGAAGAACAGCAGCCTGGTA
EY939125       <-- TAGCTCAATTTGTCTGTGGTGTTGAACAGCAGAAGAACAGCAGCCTGGTA
FD542047       <-- TAGCTCAATTTGTCTGTTGTGTTGAACAGCAGAAGCACAGCAGCCTGGTA
EY919812       --> ..................................................
FD977739       --> TAGCTCAATTTGTCTGTGGTGTT...........................
FD538204       --> ..................................................
EY893788       --> ..................................................
FD564907       --> ..................................................

               801    -    851
UN09931        --> AGTAGACACAACTAACTCAATGGGCTTGTGATCAAACTTTCCGTTGAGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923751       <-- ..................................................
EY924102       <-- AGTAGACACAACTAACTCAATGGGCTTGTGATCAAACTTTCCGTTGAGGT
EY915976       <-- AGTAGACACAACTAACTCAATGGGCTTGTGATCAAACTTTCCGTTGAGGT
EY897477       <-- AGTAGACACAACTAACTCAATGGGCTTGTGATCAAACTTTCCGTTGAGGT
EY939125       <-- AGTAGACACAACTAACTCAATGGGCTTGTGATCAAACTTTCCGTTGAGGT
FD542047       <-- AGTAGACACA--AAACTCAATGGGCTTGTGATCAAACTTTCCGTTGAGGT
EY919812       --> ..................................................
FD977739       --> ..................................................
FD538204       --> ..................................................
EY893788       --> ..................................................
FD564907       --> ..................................................

               851    -    901
UN09931        --> GACAAGTTCCTAGTGAGTAGATCCATGTAAGTTTCCTATGTTTCGTTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923751       <-- ..................................................
EY924102       <-- GACAAGTTCCTAGTcc..................................
EY915976       <-- GACAAGTTCCTAGTGAGTAGATCCATGTAAGTTTCCTATGTTTCGTTTTC
EY897477       <-- GACAAGTTCCTAGTGAGTAGATCCATGTAAGTTTCCTATGTTTCGTTTTC
EY939125       <-- GACAAGTTCTTAGTGAGTAGATCCATGTAAGTTTCCTATG..........
FD542047       <-- GACAAGTTCCTAGCGAATAGATCCATGTAAGTTTCCTATGTTTCGTTTTC
EY919812       --> ..................................................
FD977739       --> ..................................................
FD538204       --> ..................................................
EY893788       --> ..................................................
FD564907       --> ..................................................

               901    -    951
UN09931        --> GTCTCATAAAACCCTTTGAAAACTTCAACACACTTGACCATTTCACTGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923751       <-- ..................................................
EY924102       <-- ..................................................
EY915976       <-- GTCTCATAAAACCCcc..................................
EY897477       <-- GTCTCATAAAACCCTTTGAAAACTTCAACACACTTGACCATTTCACTGGG
EY939125       <-- ..................................................
FD542047       <-- GTCTCATAAAACCCTTTGAAAACTTCAACACACTTGACCATTTCACTGGG
EY919812       --> ..................................................
FD977739       --> ..................................................
FD538204       --> ..................................................
EY893788       --> ..................................................
FD564907       --> ..................................................

               951    -   1001
UN09931        --> TAGATTTATGTCGAATGATTTGTAGCTTGGCCAGAAACCAGTGGTAAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923751       <-- ..................................................
EY924102       <-- ..................................................
EY915976       <-- ..................................................
EY897477       <-- TAGATTTATGTCGAATGATTTGTAGCTTGGCCAGAAACCAGTGGTAAGAA
EY939125       <-- ..................................................
FD542047       <-- TAGATTTATGTCGAATGATTTGTAGCTTGGCCAGAAACCAGTGGTAAGAA
EY919812       --> ..................................................
FD977739       --> ..................................................
FD538204       --> ..................................................
EY893788       --> ..................................................
FD564907       --> ..................................................

               1001   -   1051
UN09931        --> CAGTTACGGTCAAATCAATCCCTGGGTTTGCAGCGGGGTTGTTGCCTAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923751       <-- ..................................................
EY924102       <-- ..................................................
EY915976       <-- ..................................................
EY897477       <-- CAGTTACGGTCAAATCAATCCCTGGGTTTGCAGCGGGGTTGTTGCCTAGA
EY939125       <-- ..................................................
FD542047       <-- CAGTTACGGTCAAATCAATCCCTGGGTTTGCAGCGGGGTTGTTGCCTAGA
EY919812       --> ..................................................
FD977739       --> ..................................................
FD538204       --> ..................................................
EY893788       --> ..................................................
FD564907       --> ..................................................

               1051   -   1101
UN09931        --> TACTCCTCGAAACTGGTTTGGTTCTCTCTTGCCAATGTCAAGTCCGTTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923751       <-- ..................................................
EY924102       <-- ..................................................
EY915976       <-- ..................................................
EY897477       <-- TACTCCTCAAAACTGGTTTGGTTCTCTCTTGCCAATGTCAAGTCAGTTAC
EY939125       <-- ..................................................
FD542047       <-- TACTCCTCGAAACTGGTTTGGTTCTCTCTTGCCAATGTCAAGTCCGTTAC
EY919812       --> ..................................................
FD977739       --> ..................................................
FD538204       --> ..................................................
EY893788       --> ..................................................
FD564907       --> ..................................................

               1101   -   1151
UN09931        --> CATGCCCTCCATCTTAGAAGTGAACTGCCCACCACATTGTTGCTTGAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923751       <-- ..................................................
EY924102       <-- ..................................................
EY915976       <-- ..................................................
EY897477       <-- CATGCCCTCCc.......................................
EY939125       <-- ..................................................
FD542047       <-- CATGCCCTCCATCTTAGAAGTGAACTGCCCACCACATTGTTGCTTGAGCT
EY919812       --> ..................................................
FD977739       --> ..................................................
FD538204       --> ..................................................
EY893788       --> ..................................................
FD564907       --> ..................................................

               1151   -   1201
UN09931        --> TTGTAAGGATGCTTCTCTCATGATCATCATTAGCACTGCGATCAAATAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923751       <-- ..................................................
EY924102       <-- ..................................................
EY915976       <-- ..................................................
EY897477       <-- ..................................................
EY939125       <-- ..................................................
FD542047       <-- TTGTAAGGATGCTTCTCTCATGATCATCATTAGCACTGCGATCAAATAAG
EY919812       --> ..................................................
FD977739       --> ..................................................
FD538204       --> ..................................................
EY893788       --> ..................................................
FD564907       --> ..................................................

               1201   -   1251
UN09931        --> AGCCTACGTGCCAGCTTCTTCCTGTAGAACTCGGCGAAAAGATCCTTGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923751       <-- ..................................................
EY924102       <-- ..................................................
EY915976       <-- ..................................................
EY897477       <-- ..................................................
EY939125       <-- ..................................................
FD542047       <-- AGCCTACGTGCCAGCTTCTTCCTGTAGAACTCGGCGAAAAGATCCTTGTC
EY919812       --> ..................................................
FD977739       --> ..................................................
FD538204       --> ..................................................
EY893788       --> ..................................................
FD564907       --> ..................................................

               1251   -   1301
UN09931        --> GCTTATATAAGCAAGCTCATCACTCAGCTTCTCACTACCCCCCTTCTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923751       <-- ..................................................
EY924102       <-- ..................................................
EY915976       <-- ..................................................
EY897477       <-- ..................................................
EY939125       <-- ..................................................
FD542047       <-- GCTTATATAAGCAAGCTCATCACTCAGCTTCTCACTACCCCCCTTCTTGA
EY919812       --> ..................................................
FD977739       --> ..................................................
FD538204       --> ..................................................
EY893788       --> ..................................................
FD564907       --> ..................................................

               1301   -   1351
UN09931        --> GGATGTTGTCGCAGAATGTTGCAAGCAATTCTGCACTTGAACTTCCAGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY923751       <-- ..................................................
EY924102       <-- ..................................................
EY915976       <-- ..................................................
EY897477       <-- ..................................................
EY939125       <-- ..................................................
FD542047       <-- GGATGTTGTCGCAGAATGTTGCAAGCAATTCTGCACTTGAACTTCCAGCG
EY919812       --> ..................................................
FD977739       --> ..................................................
FD538204       --> ..................................................
EY893788       --> ..................................................
FD564907       --> ..................................................

               1351   -   1401
UN09931        --> ACTGTTTTGTTACAGACC
                   ~~~~~~~~~~~~~~~~~~
EY923751       <-- ..................
EY924102       <-- ..................
EY915976       <-- ..................
EY897477       <-- ..................
EY939125       <-- ..................
FD542047       <-- ACTGTTTTGTTACAGACC
EY919812       --> ..................
FD977739       --> ..................
FD538204       --> ..................
EY893788       --> ..................
FD564907       --> ..................