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Alignment for radish unigene UN09943

               1      -     51
UN09943        --> TTTTTTTGTTGGTTGCTTGAGCGTTGGTGTTCGGCAAGCAAACCAAAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737602       <-- ..................................................
EY943468       <-- ..................................................
EY943535       <-- ..................................................
EY929048       <-- ..................................................
FD961419       <-- ..................................................
EV546320       <-- ..................................................
EY926742       <-- ..................................................
EY934730       <-- ..................................................
EY930563       --> TTTTTTTGTTGGTTGCTTGAGCGTTGGTGTTCGGCAAGCAAACCAAAGCA
EY933621       --> .................................ggAAGCAAACCAAAGCA
EW733368       --> .......................................ggACCAAAGCA
EV551170       --> ..................................ggggcaaggaaaccCA
EY938647       --> ......................................ggaggaaaccCA
FD572309       --> ..................................ggggcaaggaaaccCA
FD965771       --> ..............................gtgttcggtaaggaaaccCA
EY947605       --> ..................................................
EY947682       --> ..................................................

               51     -    101
UN09943        --> TTCAGACGATGATGGCTTCGACTCCGCAGCTTACCCTTTGTACCTTCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737602       <-- ..................................................
EY943468       <-- ..................................................
EY943535       <-- ..................................................
EY929048       <-- ..................................................
FD961419       <-- ..................................................
EV546320       <-- ..................................................
EY926742       <-- ..................................................
EY934730       <-- ..................................................
EY930563       --> TTCAGACGATGATGGCTTCGACTCCGCAGCTTACCCTTTGTACCTTCTCC
EY933621       --> TTCAGACGATGATGGCTTCGACTCCGCAGCTTACCCTTTGTACCTTCTCC
EW733368       --> TTCAGACGATGATGGCTTCGACTCCGCAGCTTACCCTTTGTACCTTCTCC
EV551170       --> TTCAGACGATGATGGCTTCGACTCCGCAGCTTACCCTTTGTACCTTCTCC
EY938647       --> TTCAGACGATGATGGCTTCGACTCCGCAGCTTACCCTTTGTACCTTCTCC
FD572309       --> TTCAGACGATGATGGCTTCGACTCCGCAGCTTACCCTTTGTACCTTCTCC
FD965771       --> TTCAGACGATGATGGCTTCGACTCCACAGCTTACCCTTTGTACCTTCTCC
EY947605       --> ..................................................
EY947682       --> ..................................................

               101    -    151
UN09943        --> ATACACGACGGCTTCAACAAGCAACCCAGAAACAGACTACGCTCCAAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737602       <-- ..................................................
EY943468       <-- ..................................................
EY943535       <-- ..................................................
EY929048       <-- ..................................................
FD961419       <-- ..................................................
EV546320       <-- ..................................................
EY926742       <-- ..................................................
EY934730       <-- ..................................................
EY930563       --> ATACACGACGGCTTCAACAAGCAACCCAGAAACAGACTACGCTCCAAAGG
EY933621       --> ATACACGACGGCTTCAACAAGCAACCCAGAAACAGACTACGCTCCAAAGG
EW733368       --> ATACACGACGGCTTCAACAAGCAACCCAGAAACAGACAACGCTCCAAAGG
EV551170       --> ATACACGACGGCTTCAACAAGCAACCCAGAAACAGATTACGCTCCAAAGG
EY938647       --> ATACACGACGGCTTCAACAAGCAACCCAGAAACAGACTACGCTCCAAAGG
FD572309       --> ATACACGACGGCTTCAACAAGCAACCCAGAAACAGACTACGCTCCAAAGG
FD965771       --> ATACACGACGGCTTCAACAAGCAACCCAGAAACAGACTACGCTCCAAAGG
EY947605       --> ..................................................
EY947682       --> ..................................................

               151    -    201
UN09943        --> ACGGAGCTTTGGTCCTTCTCTGCTCGGAAACAAGTCGGGATTA---AGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737602       <-- ....................TGCTCGGAAACAAGTCGGGATTATTAAGAG
EY943468       <-- ..................................................
EY943535       <-- ..................................................
EY929048       <-- ..................................................
FD961419       <-- ..................................................
EV546320       <-- ..................................................
EY926742       <-- ..................................................
EY934730       <-- ..................................................
EY930563       --> ACGGAGCTTTGGTCCTTCTTTGCTCGGAAACAAGTCGGGATTA---AGAG
EY933621       --> ACGGAGCTTTGGTCCTTCTCTGCTCGGAAACAAGTCGGGATTA---AGAG
EW733368       --> ACGGAGCTTTTGTCCTTCTCTGCTCGGAAACAAGTCGGGATTATTAAGAG
EV551170       --> ACGGAGCTTTGGTCCTTCTCTGCTCGGAAACAAGTCGGGATTA---AGAG
EY938647       --> ACGGAGCTTTGGTCCTTCTCTGCTCGGAAACAAGTCGGGATTA---AGAG
FD572309       --> ACGGAGCTTTGGTCCTTCTCTGCTCGGAAACAAGTCGGGATTA---AGAG
FD965771       --> ACGGAGCTTTGGTCCTTCTCTGCTCGGAAACAAGTCGGGATTA---AGAG
EY947605       --> ..................................................
EY947682       --> ..................................................

               201    -    251
UN09943        --> CTAGCATGATTGAGCTTCGTCAGAGACGGCCAGCGATGATGGGTCGGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737602       <-- CTAGCATGATTGAGCTTCGTCAGAGACGGCCAGCGATGATGGGTCGGAAA
EY943468       <-- ..................................................
EY943535       <-- ..................................................
EY929048       <-- ..................................................
FD961419       <-- ..................................................
EV546320       <-- ..................................................
EY926742       <-- ..................................................
EY934730       <-- ..................................................
EY930563       --> CTAGCATGATTGAGCTTCGTCAGAGACGGCCAGCGATGATGGGTCGGAAA
EY933621       --> CTAGCATGATTGAGCTTCGTCAGAGACGGCCAGCGATGATGGGTCGGAAA
EW733368       --> CTAGCATGATTGAGCTTCGTCAGAGACGGCCAGCGATGATGGGTCGGAAA
EV551170       --> CTAGCATGATTGAGCTTCGTCAGAGACGGCCAGCGATGATGGGTCGGAAA
EY938647       --> CTAGCATGATTGAGCTTCGTCAGAGACGGCCAGCGATGATGGGTCGGAAA
FD572309       --> CTAGCATGATTGAGCTTCGTCAGAGACGGCCAGCGATGATGGGTCGGAAA
FD965771       --> CTAGCATGATTGAGCTTCTTCAGAGACGGCCAGCGATGATGGGTCGAAAA
EY947605       --> ..................................................
EY947682       --> ..................................................

               251    -    301
UN09943        --> GAAACTGGATTTCTAGCAAGAGAGAGAGCTCTCAATCGTAAAAGAAGAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737602       <-- GAAACTGGATTTCTAGCAAGAGAGAGAGCTCTAAATCGTAAAAGAAGAGT  Raphanus sativus cv Rat-Tail Radish #3870
EY943468       <-- ................................................GT  Raphanus sativus cv Rat-Tail Radish #3870
EY943535       <-- ................................................GT  Raphanus sativus cv Rat-Tail Radish #3870
EY929048       <-- ..................................................  Raphanus sativus var. oleiformis
FD961419       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV546320       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY926742       <-- ..................................................  Raphanus sativus var. oleiformis
EY934730       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY930563       --> GAAACTGGATTTCTAGCAAGAGAGAGAGCTCTAAATCGTAAAAGAAGAGT  Raphanus sativus var. oleiformis
EY933621       --> GAAACTGGATTTCTAGCAAGAGAGAGAGCTCTAAATCGTAAAAGAAGAGT  Raphanus sativus var. oleiformis
EW733368       --> GAAACTGGATTTCTAGCAAGAGAGAGAGCTCTAAATCGTAAAAGAAGAGT  Raphanus sativus cv Rat-Tail Radish #3870
EV551170       --> GAAACTGGATTTCTAGCAAGAGAGAGAGCTCTCAATCGTAAAAGAAGAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY938647       --> GAAACTGGATTTCTAGCAAGAGAGAAAGCTCTCAATCGTAAAAGAAGAGT  Raphanus sativus cv Early Scarlet Globe
FD572309       --> GAAACTGGATTTCTAGCAAGAGAGAGAGCTCTCAATCGTAAAAGAAGAGT  Raphanus sativus cv Early Scarlet Globe
FD965771       --> GAAACTGGATTTATAGCAAGAGAGAGAGCTCTCAATCGTAAAAGAAGAGT  Raphanus raphanistrum subsp. maritimus
EY947605       --> ................................................GT  Raphanus sativus cv Rat-Tail Radish #3870
EY947682       --> ................................................GT  Raphanus sativus cv Rat-Tail Radish #3870

               301    -    351
UN09943        --> CTTTAAGGTTAGCTGTAACAAAGGTTTAGGCTTTAACGGCGGCGGAGATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737602       <-- CTTTAAGGTTAGCTGTAACAAAGGTTTAGGCTTTAACGGCGGCGGAGATA  Raphanus sativus cv Rat-Tail Radish #3870
EY943468       <-- CTTTAAGGTTAGCTGTAACAAAGGTTTAGGCTTTAACGGCGGCTGAGATA  Raphanus sativus cv Rat-Tail Radish #3870
EY943535       <-- CTTTAAGGTTAGCTGTAACAAAGGTTTAGGCTTTAACGGCGGCTGAGATA  Raphanus sativus cv Rat-Tail Radish #3870
EY929048       <-- ...TAAGGTTAGCTGTAACAAAGGTTTAGGCTTTAACGGAGGCGGAGATA  Raphanus sativus var. oleiformis
FD961419       <-- ..................CAAAGGTTTAGGCTTTAACGGAGGCGGAGATA  Raphanus raphanistrum subsp. maritimus
EV546320       <-- ................................................TA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY926742       <-- ..................................................  Raphanus sativus var. oleiformis
EY934730       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY930563       --> CTTTAAGGTTAGCTGTAACAAAGGTTTAGGCTTTAACGGAGGCGGAGATA  Raphanus sativus var. oleiformis
EY933621       --> CTTTAAGGTTAGCTGTAACAAAGGTTTAGGCTTTAACGGAGGCGGAGATA  Raphanus sativus var. oleiformis
EW733368       --> CTTTAAGGTTAGCTGTAACAAAGGTTTAGGCTTTAACGGCGGCGGAGATA  Raphanus sativus cv Rat-Tail Radish #3870
EV551170       --> CTTTAAGGTTAGCTGTAACAAAGGTTTAGGCTTTAACGGCGGCGGAGATA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY938647       --> CTTTAAGGTTAGCTGTAACAAAGGTTTAGGCTTTAACGGCGGCGGAGATA  Raphanus sativus cv Early Scarlet Globe
FD572309       --> CTTTAAGGTTAGCTGTAACAAAGGTTTAGGCTTTAACGGCGGCGGAGATA  Raphanus sativus cv Early Scarlet Globe
FD965771       --> CTTTAAGGTTAGCTGTAACAAAGGTTTAGGCTTTAACGGAGGCGGAGATA  Raphanus raphanistrum subsp. maritimus
EY947605       --> CTTTAAGGTTAGCTGTAACAAAGGTTTAGGCTTTAACGGCGGCTGAGATA  Raphanus sativus cv Rat-Tail Radish #3870
EY947682       --> CTTTAAGGTTAGCTGTAACAAAGGTTTAGGCTTTAACGGCGGCTGAGATA  Raphanus sativus cv Rat-Tail Radish #3870

               351    -    401
UN09943        --> ACAACGGGAACGGGAACGGGAGGATCCTCGGGAACCTCGCTTTGGCTATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737602       <-- ACAACGGGAA------CGGGAGGATCCTCGGGAACCTCGCTTTGGCTATT
EY943468       <-- ACAACGG--------GAACGGGGATCCTCGGGAACCTCGCTTTGGCTATT
EY943535       <-- ACAACGG--------GAACGGGGATCCTCGGGAACCTCGCTTTGGCTATT
EY929048       <-- ACAACGGGAACGGGAACGGGAGGATCCTCGGGAACCTCGCTTTGGCTATT
FD961419       <-- ACAACGGGAACGGGAACGGGAGGATCCTCGGGAACCTCGCTTTGGCTATT
EV546320       <-- ACAACGGGAACGGGAACGGGAGGATCCTCGGGAACCTCGCTTTGGCTATT
EY926742       <-- ..................................................
EY934730       <-- ..................................................
EY930563       --> ACAACGGGAACGGGAACGGGAGGATCCTCGGGAACCTCGCTTTGGCTATT
EY933621       --> ACAACGGGAACGGGAACGGGAGGATCCTCGGGAACCTCGCTTTGGCTATT
EW733368       --> ACAACGGGAACGGGA------GGATCCTCGGGAACCTCGCTTTGGCTATT
EV551170       --> ACAACGGGAACGGGAACGGGAGGATCCTCGGGAACCTCGCTTTGGCTATT
EY938647       --> ACAACGGGAACGGGAACGGGAGGATCCTCGGGAACCTCGCTTTGGCTATT
FD572309       --> ACAACGGGAACGGGAACGGGAGGATCCTCGGGAACCTCGCTTTGGCTATT
FD965771       --> ACAACGGGAACGGGAACGGGAGGATCCTCGGGAACCTCGCTTTGGCTATT
EY947605       --> ACAACGGGAACGGG--------GATCCTCGGGAACCTCGCTTTGGCTATT
EY947682       --> ACAACGGGAACGGG--------GATCCTCGGGAACCTCGCTTTGGCTATT

               401    -    451
UN09943        --> GGTTTGACTTATCTCTCTATGACTGGTCAGCTTGGTTGGGTTCTCGACGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737602       <-- GGTTTGACTTATCTCTCTATGACTGGTCAGCTTGGTTGGGTTCTCGACGC
EY943468       <-- GGTTTGACTTATCTCTCTATGACTGGTCAGCTTGGTTGGGTTCTCGACGC
EY943535       <-- GGTTTGACTTATCTCTCTATGACTGGTCAGCTTGGTTGGGTTCTCGACGC
EY929048       <-- GGTTTGACTTATCTCTCTATGACTGGCCAACTTGGTTGGGTTCTCGACGC
FD961419       <-- GGTTTGACTTATCTCTCTATGACTGGTCAGATTGGTTGGGTTCTCGACGC
EV546320       <-- GGTTTGACTTATCTCTCTATGACTGGTCAGCTTGGTTGGGTTCTCGACGC
EY926742       <-- ..................................................
EY934730       <-- ..................................................
EY930563       --> GGTTTGACTTATCTCTCTATGACTGGTCAACTTGGTTGGGTTCTCGACGC
EY933621       --> GGTTTGACTTATCTCTCTATGACTGGCCAACTTGGTTGGGTTCTCGACGC
EW733368       --> GGTTTGACTTATCTCTCTATGACTGGTCAGCTTGGTTGGGTTCTCGACGC
EV551170       --> GGTTTGACTTATCTCTCTATGACTGGTCAGCTTGGTTGGGTTCTCGACGC
EY938647       --> GGTTTGACTTATCTCTCTATGACTGGTCAGCTTGGTTGGGTTCTCGACGC
FD572309       --> GGTTTGACTTATCTCTCTATGACTGGTCAGCTTGGTTGGGTTCTCGACGC
FD965771       --> GGTTTGACTTATCTCTCTATGACTGGTCAGATTGGTTGGGTTCTCGACGC
EY947605       --> GGTTTGACTTATCTCTCTATGACTGGTCAGCTTGGTTGGGTTCTCGACGC
EY947682       --> GGTTTGACTTATCTCTCTATGACTGGTCAGCTTGGTTGGGTTCTCGACGC

               451    -    501
UN09943        --> TATTGTATCCGTCTGGCTGGTTGTGGTGATTGTTCCAATTTTGGGGTTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737602       <-- TATTGTATCCGTCTGGCTGGTTGTGGTGATTGTTCCAATTTTGGGGTTGG
EY943468       <-- TATTGTATCCGTCTGGCTGGTTGTGGTGATTGTTCCAATTTTGGGGTTGG
EY943535       <-- TATTGTATCCGTCTGGCTGGTTGTGGTGATTGTTCCAATTTTGGGGTTGG
EY929048       <-- TATTGTATCCGTCTGGCTGGTTGTGGTGATTGTTCCAATTTTGGGGTTGG
FD961419       <-- TATTGTATCCGTCTGGCTGGTTGTGGTGATTGTTCCAATTTTGGGGTTGG
EV546320       <-- TATTGTATCCGTCTGGCTGGTTGTGGTGATTGTTCCAATTTTGGGGTTGG
EY926742       <-- ..................................................
EY934730       <-- ..................................................
EY930563       --> TATTGTATCCGTCTGGCTGGTTGTGGTGATTGTTCCAATTTTGGGGTTGG
EY933621       --> TATTGTATCCGTCTGGCTGGTTGTGGTGATTGTTCCAATTTTGGGGTTGG
EW733368       --> TATTGTATCCGTCTGGCTGGTTGTGGTGATTGTTCCAATTTTGGGGTTGG
EV551170       --> TATTGTATCCGTCTGGCTGGTTGTGGTGATTGTTCCAATTTTGGGGTTGG
EY938647       --> TATTGTATCCGTCTGGCTGGTTGTGGTGATTGTTCCAATTTTGGGGTTGG
FD572309       --> TATTGTATCCGTCTGGCTGGTTGTGGTGATTGTTCCAATTTTGGGGTTGG
FD965771       --> TATTGTATCCGTCTGGCTGGTTGTGGTGATTGTTCCAATTTTGGGGTTGG
EY947605       --> TATTGTATCCGTCTGGCTGGTTGTGGTGATTGTTCCAATTTTGGGGTTGG
EY947682       --> TATTGTATCCGTCTGGCTGGTTGTGGTGATTGTTCCAATTTTGGGGTTGG

               501    -    551
UN09943        --> GAGCTTTTCTTTGGTGGGCACAACGAGATATTGTCCAGAGCAGTTGTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737602       <-- GAGCTTTTCTTTGGTGGGCACAACGAGATATTGTCCAGAGCAGTTGTCCA
EY943468       <-- GAGCTTTTCTTTGGTGGGCACAACGAGATATTGTCCAGAGCAGTTGTCCA
EY943535       <-- GAGCTTTTCTTTGGTGGGCACAACGAGATATTGTCCAGAGCAGTTGTCCA
EY929048       <-- GAGCTTTTCTTTGGTGGGCACAACGAGATATTGTCCAGAGCAGTTGTCCA
FD961419       <-- GAGCTTTTCTTTGGTGGGCACAACGAGATATTGTCCAGAGCAGTTGTCCA
EV546320       <-- GAGCTTTTTTTTGGTGGGCACAACGAGATATTGTCCAGAGCAGTTGTCCA
EY926742       <-- ..................................................
EY934730       <-- ..................................................
EY930563       --> GAGCTTTTCTTTGGTGGGCACAACGAGATATTGTCCAGAGCAGTTGTCCA
EY933621       --> GAGCTTTTCTTTGGTGGGCACAACGAGATATTGTCCAGAGCAGTTGTCCA
EW733368       --> GAGCTTTTCTTTGGTGGGCACAACGAGATATTGTCCAGAGCAGTTGTCCA
EV551170       --> GAGCTTTTCTTTGGTGGGCACAACGAGATATTGTCCAGAGCAGTTGTCCA
EY938647       --> GAGCTTTTCTTTGGTGGGCACAACGAGATATTGTCCAGAGCAGTTGTCCA
FD572309       --> GAGCTTTTCTTTGGTGGGCACAACGAGATATTGTCCAGAGCAGTTGTCCA
FD965771       --> GAGCTTTTCTTTGGTGGGCACAACGAGATATTGTCCAGAGCAGTTGTCCA
EY947605       --> GAGCTTTTCTTTGGTGGGCACAACGAGATATTGTCCAGAGCAGTTGTCCA
EY947682       --> GAGCTTTTCTTTGGTGGGCACAACGAGATATTGTCCAGAGCAGTTGTCCA

               551    -    601
UN09943        --> AATTGCGGAAACGAGTTTCAGATATTCAAGTCATCGTTGGACGATGAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737602       <-- AATTGCGGAAACGAGTTTCAGATATTCAAGTCATCGTTGGACGATGAAGT
EY943468       <-- AATTGCGGAAACGAGTTTCAGATATTCAAGTCATCGTTGGACGATGAAGT
EY943535       <-- AATTGCGGAAACGAGTTTCAGATATTCAAGTCATCGTTGGACGATGAAGT
EY929048       <-- AATTGCGGAAACGAGTTTCAGATATTCAAGTCATCGTTGGACGATGAAGT
FD961419       <-- AATTGCGGAAACGAGTTTCAGATATTCAAGTCATCGTTGGACGATGAAGT
EV546320       <-- AATTGCGGAAACGAGTTTCAGATATTCAAGTCATCGTTGGACGATGAAGT
EY926742       <-- ..................................................
EY934730       <-- ..................................................
EY930563       --> AATTGCGGAAACGAGTTTCAGATATTCAAGTCATCGTTGGACGATGAAGT
EY933621       --> AATTGCGGAAACGAGTTTCAGATATTCAAGTCATCGTTGGACGATGAAGT
EW733368       --> AATTGCGGAAACGAGTTTCAGATATTCAAGTCATCGTTGGACGATGAAGT
EV551170       --> AATTGCGGAAACGAGTTTCAGATATTCAAGTCATCGTTGGACGATGAAGT
EY938647       --> AATTGCGGAAACGAGTTTCAGATATTCAAGTCATCGTTGGACGATGAAGT
FD572309       --> AATTGCGGAAACGAGTTTCAGATATTCAAGTCATCGTTGGACGATGAAGT
FD965771       --> AATTGCGGAAACGAGTTTCAGATATTCAAGTCATCGTTGGACGATGAAGT
EY947605       --> AATTGCGGAAACGAGTTTCAGATATTCAAGTCATCGTTGGACGATGAAGT
EY947682       --> AATTGCGGAAACGAGTTTCAGATATTCAAGTCATCGTTGGACGATGAAGT

               601    -    651
UN09943        --> ACAGCTTTGCCCTTTCTGCACTCAGCCATTCTCAGTTGCGGATGATAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737602       <-- ACAGCTTTGCCCTTTCTGCACTCAGCCATTCTCAGTTGCGGATGATAAGT
EY943468       <-- ACAGCTTTGCCCTTTCTGCACTCAGCCATTCTCAGTTGCGGATGATAAGT
EY943535       <-- ACAGCTTTGCCCTTTCTGCACTCAGCCATTCTCAGTTGCGGATGATAAGT
EY929048       <-- ACAGCTTTGCCCTTTCTGCACTCAGCCATTTTCAGTTGCGGATGATAAGT
FD961419       <-- ACAGCTTTGCCCTTTCTGCACTCAGCCATTCTCAGTTGCGGATGATAAGT
EV546320       <-- ACAGCTTTGCCCTTTCTGCATTCAGCCATTTTCAGTTGCGGATGATAAGT
EY926742       <-- ..................................................
EY934730       <-- ..................................................
EY930563       --> ACAGCTTTGCCCTTTCTGCACTCAGCCATTCTCAGTTGCGGATGATAAGT
EY933621       --> ACAGCTTTGCCCTTTCTGCACTCAGCCATTCTCAGTTGCGGA........
EW733368       --> ACAGCTTTGCCCTTTCTGCACTCAGCCATTCTCAGTTGCGGATGATAAGT
EV551170       --> ACAGCTTTGCCCTTTCTGCACTCAGCCATTCTCAGTTGCGGATGATAAGT
EY938647       --> ACAGCTTTGCCCTTTCTGCACTCAGCCATTCTCAGTTGCGGATGATAAGT
FD572309       --> ACAGCTTTGCCCTTTCTGCACTCAGCCATTCTCAGTTGCGGATGATAAGT
FD965771       --> ACAGCTTTGCCCTTTCTGCACTCAGCCATTCTCAGTTGCGGATGATAAGT
EY947605       --> ACAGCTTTGCCCTTTCTGCACTCAGCCATTCTCAGTTGCGGATGATAAGT
EY947682       --> ACAGCTTTGCCCTTTCTGCACTCAGCCATTCTCAGTTGCGGATGATAAGT

               651    -    701
UN09943        --> TTGTTAAGGAACCAGTGAAATTTTCCAACCAAACTACTGCTTTCGGACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737602       <-- TTGTTAAGGAACCAGTGAAATTTTCCAACCAAACTACTGCTTTCGGACAA
EY943468       <-- TTGTTAAGGAACCAGTGAAATTTTCCAACCAAACTACTGCTTTCGGACAA
EY943535       <-- TTGTTAAGGAACCAGTGAAATTTTCCAACCAAACTACTGCTTTCGGACAA
EY929048       <-- TTGTTAAGGAACCAGTGAAATTTTCCAACCAAACTACTGCTTTCGGACAA
FD961419       <-- TTGTTAAGGAACCAGTGAAATTTTCCAACCAAACTACTGCTTTCGGACAA
EV546320       <-- TTGTTAAGGAACCAGTGAAATTTTCCAACCAAACTACTGCTTTCGGACAA
EY926742       <-- ......................................GCTTTCGGACAA
EY934730       <-- ..................................................
EY930563       --> ..................................................
EY933621       --> ..................................................
EW733368       --> TTGTTAAGGAACCAGTGAAATTTTCCAACCAAACTACTGCTTTCGGACAA
EV551170       --> TTGTTAAGGAACCAGTGAAATTTTCCAACCAAACTACTGCTTTCGGACAA
EY938647       --> TTGTTAAG-AACCAGTGAAATTTTCCAACCAAACTACTGCT.........
FD572309       --> TTGTTAAGGAACCAGTGAAATTTTCCAACCAAACTACTGCTTTCGGACAA
FD965771       --> TTGTTAAGGAACCAGTGAAATTTTCCAACCAAACTACTGCTTTCGGACAA
EY947605       --> TTGTTAAGGAACCAGTGAAATTTTCCAACCAAACTACTGCTTTCGGACAA
EY947682       --> TTGTTAAGGAACCAGTGAAATTTTCCAACCAAACTACTGCTTTCGGACAA

               701    -    751
UN09943        --> GACCTAAATGGGTTTTCTTCTCCACCTAAGAAAGGAAAGGGTTTCTCAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737602       <-- GACCTAAATGGGTTTTCTTCTCCACCTAAGAAAGGAAAGGGTTTCTCAAC
EY943468       <-- GACCTAAATGGGTTTTCTTCTCCACCTAAGAAAGGAAAGGGTTTCTCAAC
EY943535       <-- GACCTAAATGGGTTTTCTTCTCCACCTAAGAAAGGAAAGGGTTTCTCAAC
EY929048       <-- GACCTAAATGGGTTTTTTTCTCCACCTAAGAAAGGAAAGGGTTTCTCAAC
FD961419       <-- GACCTAAATGGGTTTTCTTCTCCACCTAAGAAAGGAAAGGGTTTCTCAAC
EV546320       <-- GACCTAAATGGGTTTTTTTCTCCACCTAAGAAAGGAAAGGGTTTCTCAAC
EY926742       <-- GACCTAAATGGGTTTTCTTCTCCACCTAAGAAAGGAAAGGGTTTCTCAAC
EY934730       <-- ...........................AAGAAAGGAAAGGGTTTCTCAAC
EY930563       --> ..................................................
EY933621       --> ..................................................
EW733368       --> GACCTAAATGGGTTTTCTTCTCCACCTAAGAAAGGAAAagg.........
EV551170       --> GACCTAAATGGGTTTTCTTCTCCACCTAAGAAAGGAAAGGGTTTCTCAAC
EY938647       --> ..................................................
FD572309       --> GACCTAAATGGGTTTTCTTCTCCACCTAAGAAAGGAAAGGGTT-CTCAAC
FD965771       --> GACCTAAATGGGTTTTCT................................
EY947605       --> GACCTAAATGGGTTTTCTTCTCCACCTAAGAAAGGAAAGGGTTTCTCAAC
EY947682       --> GACCTAAATGGGTTTTCTTCTCCACCTAAGAAAGGAAAGGGTTTCTCAAC

               751    -    801
UN09943        --> AGCGGTAGTGGACATAGAAGCTGAAGTAACAGATGCAGACTGAAAATGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737602       <-- AGCGGTAGTGGACATAGAAGCTGAAGTAACAGATGCAGACTGAAAATGCG
EY943468       <-- AGCGGTAGTGGACATAGAAGCTGGAGTAACAGATGCAGACTGAAAATGCG
EY943535       <-- AGCGGTAGTGGACATAGAAGCTGGAGTAACAGATGCAGACTGAAAATGCG
EY929048       <-- AGCGGTAGTGGACATAGAAGCTGAAGTAACAGATGCAGACTGAAAATGCG
FD961419       <-- AGCGGTAGTGGACATAGAAGCTGAAGTAACAGATGCAGACTGAAAATGCG
EV546320       <-- AGCGGTAGTGGACATAGAAGCTGAAGTAACAGATGCAGACTGAAAATGCG
EY926742       <-- AGCGGTAGTGGACATAGAAGCTGAAGTAACAGATGCATACTGAAAATGCG
EY934730       <-- AGCGGTAGTGGACATAGAAGCTGAAGTAACAGATGCAGACTGAAAATGCG
EY930563       --> ..................................................
EY933621       --> ..................................................
EW733368       --> ..................................................
EV551170       --> AGCGGTAGTGGACAT...................................
EY938647       --> ..................................................
FD572309       --> AGCGGTAGTGGACATAGAAGCTGAAGTA-CAGATGCAGACTGAAA-TGCG
FD965771       --> ..................................................
EY947605       --> AGCGGTAGTGGACATAGAAGCTGGAGTAACAGATGCAGACTGAAAATGCG
EY947682       --> AGCGGTAGTGGACATAGAAGCTGGAGTAACAGATGCAGACTGAAAATGCG

               801    -    851
UN09943        --> ACCCAACATATTTTCAAGTAGACCGAGCAAAGAAGATATTGTAGAGACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737602       <-- ACCCAACATATTTTCAGGTAGACCGAGCAAAGAAGATATTGTAGAGACAA
EY943468       <-- ACCCAACATATTTTCAAGTAGACCGAGCAAAGAAGATATTGTAGAGACAA
EY943535       <-- ACCCAACATATTTTCAAGTAGACCGAGCAAAGAAGATATTGTAGAGACAA
EY929048       <-- ACCCAACATATTTTCAAGTAGACCGAGCAAAGAAGATATTGTAGAGACAA
FD961419       <-- ACCCAACATATTTTCAAGTAGACCGAGCAAAGAAGATATTGTAGAGACAA
EV546320       <-- ACCCAACATATTTTCAAGTAGACCGAGCAAAGAAGATATTGTAGAGACAA
EY926742       <-- ACCCAACATATTTTCAAGTAGACCGAGCAAAGAAGATATTGTAGAGACAA
EY934730       <-- ACCCAACATATTTTCAAGTAGACCGAGCAAAGAAGATATTGTAGAGACAA
EY930563       --> ..................................................
EY933621       --> ..................................................
EW733368       --> ..................................................
EV551170       --> ..................................................
EY938647       --> ..................................................
FD572309       --> ACCCA-CATATTTTCA..................................
FD965771       --> ..................................................
EY947605       --> ACCCAACATATTTTCAAGTAGACCGAGCAAAGAAGATATTGTAGAGACAA
EY947682       --> ACCCAACATATTTTCAAGTAGACCGAGCAAAGAAGATATTGTAGAGACAA

               851    -    901
UN09943        --> AACAACAAATTCGTGCAAAGAGCTCGGTGTTGGATATAGAAGTAATATAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737602       <-- AACAACAAATTCGTGCAAAGAGCTCGGTGTTGGATATAGAAGTAATATAG
EY943468       <-- AACAACAAATTCGTGCAAAGAGCTCGGTGTTGGATATAGAAGTAATATAG
EY943535       <-- AACAACAAATTCGTGCAAAGAGCTCGGTGTTGGATATAGAAGTAATATAG
EY929048       <-- AACAACAAATTCGTGCAAAGAGCTCGGTGTGGGATATAGAAGTAATATAG
FD961419       <-- AACAACAAATTCGTGCAAAGAGCTCGGTGTTGTATATAGAAGTAATATAG
EV546320       <-- AACAACAAATTCGTGCAAAGAGCTCGGTGTTGGATATAGAAGTAATATAG
EY926742       <-- AACAACAAATTCGTGCAAAGAGCTCGGTGTTGGATATAGAAGTAATATAG
EY934730       <-- AACAACAAATTCGTGCAAAGAGCTCGGTGTTGGATATAGAAGTAATATAG
EY930563       --> ..................................................
EY933621       --> ..................................................
EW733368       --> ..................................................
EV551170       --> ..................................................
EY938647       --> ..................................................
FD572309       --> ..................................................
FD965771       --> ..................................................
EY947605       --> AACAACAAATTCGTGCAAAGAGCTCGGTGTTGGATATAGAAGTAATATAG
EY947682       --> AACAACAAATTCGTGCAAAGAGCTCGGTGTTGGATATAGAAGTAATATAG

               901    -    951
UN09943        --> ATATACACATCCACCTGTATATATACATGTCCTTCCTTGACATTGTTATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737602       <-- ATATACACATCCACCTGTATATATACATGTCCTTCCTTGACATTGTTATT
EY943468       <-- ATATACACATCCACCTGTATATATACATGTCCTTCCTTGACATTGTTATT
EY943535       <-- ATATACACATCCACCTGTATATATACATGTCCTTCCTTGACATTGTTATT
EY929048       <-- ATATACACATCCACCTGTATATATACATGTCCTTCCTTGACATTGTTATT
FD961419       <-- ATATACACATCCACCTGTATATATACATGTCCTTCCTTGACATTGTTATT
EV546320       <-- ATATACACATCCCCCTGTATATATACATGTCCTTCCTTGACATTGTTATT
EY926742       <-- ATATACACATCCACCTGTATATATACATGTCCTTCCTTGACATTGTTATT
EY934730       <-- ATATACACATCCACCTGTATATATACATGTCCTTCCTTGACATTGTTATT
EY930563       --> ..................................................
EY933621       --> ..................................................
EW733368       --> ..................................................
EV551170       --> ..................................................
EY938647       --> ..................................................
FD572309       --> ..................................................
FD965771       --> ..................................................
EY947605       --> ATATACACATCCACCTGTATATATACATGTCCTTCCTTGACATTGTTATT
EY947682       --> ATATACACATCCACCTGTATATATACATGTCCTTCCTTGACATTGTTATT

               951    -   1001
UN09943        --> ACATTTTGATCTTATGTTGTTTGAATGATTGTTTGA-GTAGTAGTTCCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW737602       <-- ACATTTTGATCTTATGTTGTTTGAATGATTGTTTGA-GTAGTAGTTCCCA
EY943468       <-- ACATTTTGATCTTATGTTGTTTGAATGATTGTTTGA-GTAGTAGTTCCCA
EY943535       <-- ACATTTTGATCTTATGTTGTTTGAATGATTGTTTGA-GTAGTAGTTCCCA
EY929048       <-- ACATTTTGATCTTATGTTGTTTGAATGATTGTTcg...............
FD961419       <-- ACATTTTGATCTTATGTTGTTTGAAcg.......................
EV546320       <-- ACATTTTGATCTTATGTTGTTTGAATGATTGTTTGA-GTAGTAGTTCC..
EY926742       <-- ACATTTTGATCTCATGTTGTTTGAA-GATTGTTTG...............
EY934730       <-- ACATTTTGATCTTATGTTGTTTGAATGATTGTTTGAAGTAGTAGTTCCCA
EY930563       --> ..................................................
EY933621       --> ..................................................
EW733368       --> ..................................................
EV551170       --> ..................................................
EY938647       --> ..................................................
FD572309       --> ..................................................
FD965771       --> ..................................................
EY947605       --> ACATTTTGATCTTATGTTGTTTGAATGATTGTTTGA-GTAGTAGTTCCCA
EY947682       --> ACATTTTGATCTTATGTTGTTTGAATGATTGTTTGA-GTAGTAGTTCCCA

               1001   -   1051
UN09943        --> TCTACGACTGTTTTATGTTCTTACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~
EW737602       <-- TCTACGACTGTTTTATGTTCTTACC
EY943468       <-- TC.......................
EY943535       <-- TC.......................
EY929048       <-- .........................
FD961419       <-- .........................
EV546320       <-- .........................
EY926742       <-- .........................
EY934730       <-- TCTACGACTGTTTTATGTTCTTACC
EY930563       --> .........................
EY933621       --> .........................
EW733368       --> .........................
EV551170       --> .........................
EY938647       --> .........................
FD572309       --> .........................
FD965771       --> .........................
EY947605       --> TCaaaaa..................
EY947682       --> TC.......................