1      -     51
UN10061        --> GGATCACGGAACTGACAGATTGCAATGCTGCTCTTTCCCAGAAGCGCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774507       <-- ..................................................
FD555203       <-- ..................................................
EV536285       --> GGATCACGGAACTGACAGATTGCAATGCTGCTCTCTCCCAGAAGCGCAAA
FY452297       --> .......GGAACTGACAGATTG-AATGCTGCTCTTTCCCAGAAGCGCAAA
FY454650       --> ..................................................
FD559508       --> ..................................................
EX770284       --> ..................................................

               51     -    101
UN10061        --> AAGCGACAGATTCCTGAAACATTGGCTTCAATAGATTCTTTGGAGAGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774507       <-- ..................................................
FD555203       <-- ..................................................
EV536285       --> AAGCGACAGATTCCTGAAACATTGGCTCCAATAGATTCTTTGGAGAGGTT
FY452297       --> AAGCGACAGATTCCTGAAACATTGGCTTCAATAGATTCTTTGGAGAGGTT
FY454650       --> ........................GCTTCA-TAGATTCTTTGGAGAGGTT
FD559508       --> ..................................................
EX770284       --> ..................................................

               101    -    151
UN10061        --> CACTCAGCTATCAAGCCACCCACTTCACAAGACCAACAAACCGGGCATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774507       <-- ..................................................
FD555203       <-- ..................................................
EV536285       --> CACTCAGCTATCAAGCCACCCACTTCACAAGACCAACAAACCGGGCATTT
FY452297       --> CACTCAGCTATCAAGCCACCCACTTCACAAGACCAACAAACCGGGCATTT
FY454650       --> CACTCAGCTATCAAGCCACCCACTTCACAAGACCAACAAACCGGGCATTT
FD559508       --> ..................................................
EX770284       --> ..................................................

               151    -    201
UN10061        --> GTTCAATGGACATCCTACATTCTAAGGATGTCATTGCTACCGGAGGACTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774507       <-- ..................................................
FD555203       <-- ..................................................
EV536285       --> GTTCAATGGACATCCTACATTCTAAGGATGTCATTGCTACCGGAGGAGTG
FY452297       --> GTTCAATGGACATCCTACATTCTAAGGATGTCATTGCTACCGGAGGACTG
FY454650       --> GTTCAATGGACATCCTACATTCTAAGGATGTCATTGCTACCGGAGGACTG
FD559508       --> ..................................................
EX770284       --> ..................................................

               201    -    251
UN10061        --> GATACAACTGCTGTTCTCTTTGATCGCCCTTCAGGGCAAATCTTGTCAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774507       <-- ..................................................
FD555203       <-- ..................................................
EV536285       --> GATACAACTGCTGTTATCTTTGATCGCCCTTCAGGGCAAATCTTGTCAAC
FY452297       --> GATACAACTGCTGTTCTCTTTGATCGCCCTTCAGGGCAAATCTTGTCAAC
FY454650       --> GATACAACTGCTGTTCTCTTTGATCGCCCTTCAGGGCAAATCTTGTCAAC
FD559508       --> ..................................................
EX770284       --> ..................................................

               251    -    301
UN10061        --> ACTTACTGGTCACTCGAAAAAGGTTACAAGTGTAAAATTTGTAGGTGACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774507       <-- ..................................................
FD555203       <-- ..................................................
EV536285       --> ACTTACTGGTCACTCGAAAAAGGTTACAAGTGTAAAATTTGTAGGTGACA
FY452297       --> ACTTACTGGTCACTCGAAAAAGGTTACAAGTGTAAAATTTGTAGGTGACA
FY454650       --> ACTTACTGGTCACTCGAAAAAGGTTACAAGTGTAAAATTTGTAGGTGACA
FD559508       --> .........gCACTCGAAAAAGGTTACAAGTTTAAAATTCGTAGGTGACA
EX770284       --> ..................................................

               301    -    351
UN10061        --> GTGATCTTGTTTTAACTGCTTCTGCTGACAAGACAGTCCGTATCTGGCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774507       <-- ..................................................
FD555203       <-- ..................................................
EV536285       --> GTGATCTTGTTTTAACTGCTTCGGCTGACAAGACAGTCCGTATCTGGCGG
FY452297       --> GTGATCTTGTTTTAACTGCTTCTGCTGACAAGACAGTCCGTATCTGGCGG
FY454650       --> GTGATCTTGTTTTAACTGCTTCTGCTGACAAGACAGTCCGTATCTGGCGG
FD559508       --> GTGATCTTGTTTTAACTGCTTCGGCTGACAAGACAGTCCGTATCTGGCGG
EX770284       --> ..................................................

               351    -    401
UN10061        --> GATTCTGGGGATAGGAATTATGCTTGTGGGCATACATTGAATGATCATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774507       <-- ..................................................
FD555203       <-- ..................................................
EV536285       --> GATTCTGGTGATAGGAATTATGCTTGTGGGCATACATTGAATGATCATTC
FY452297       --> GATTCTGGGGATAGGAATTATGCTTGTGCGCATACATTGAATGATCATTC
FY454650       --> GATTCTGGGGATAGGAATTATGCTTGTGCGCATACATTGAATGATCATTC
FD559508       --> GATTCTGGGGATAGGAATTATGCTTGTGGGCATACATTGAATGATCATTC
EX770284       --> ............................GGCATACATTGAATGATCATTC

               401    -    451
UN10061        --> TGCAGAGGTGCGAGCTGTAACTGTGCATGCCACAAATAAATACTTTGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774507       <-- ..................................................
FD555203       <-- ..................................................
EV536285       --> TGCAGAGGTGCGAGCTGTAACTGTGCATGCCACAAATAAATACTTTGTGT
FY452297       --> TGCAGAGGTGCGAGCTGTAACTGTGCATGCCACAAATAAATACTTTGTGT
FY454650       --> TGCAGAGGTGCGAGCTGTAACTGTGCATGCCACAAATAAATACTTTGTGT
FD559508       --> TGCAGAGGTGCGAGCTGTAACTGTGCATGCCACAAATAAATACTTCGTGT
EX770284       --> TGCAGAGGTGCGAGCTGTAACTGTGCATGCCACAAATAAATACTTCGTGT

               451    -    501
UN10061        --> CGGCATCTCTTGACAGTACATGGTGCTTCTACGATCTTTCCTCTGGCTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774507       <-- ..................................................
FD555203       <-- ..................................................
EV536285       --> CGGCATCTCTTGACAGTACATGGTGCTTCTACGATCTTTCCTCTGGCTTA
FY452297       --> CGGCATCTCTTGACAGTACATGGTGCTTCTACGATCTTTCCTCTGGCTTA
FY454650       --> CGGCATCTCTTGACAGTACATGGTGCTTCTACGATCTTTCCTCTGGCTTA
FD559508       --> CGGCATCTCTTGACAGTACATGGTGCTTCTACGATCTTTCCTCTGGCTTA
EX770284       --> CGGCATCTCTTGACAGTACATGGTGCTTCTACGATCTTTCCTCTGGCTTA

               501    -    551
UN10061        --> TGCCTTGCAAAGGTGTCGGATGATTCTGAGAGGGTGGATTACACGGCTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774507       <-- .......CAAAGGTATCGGATGATTCTGAGAGGGTGGATTACACGGCTGC  Raphanus raphanistrum subsp. landra
FD555203       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV536285       --> TGCCTTGCAAAGGTGTCGGATGATTCTGAGAGGGTGGATTACACGGCTGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FY452297       --> TGCCTTGCAAAGGTGTCGGATGATTCTGAGAGGGTGGATTACACGGCTGC  Raphanus sativus cv GSK3-1
FY454650       --> TGCCTTGCAAAGGTGTCGGATGATTCTGAGAGGGTGGATTACACGGCTGC  Raphanus sativus cv GSK3-1
FD559508       --> TGCCTTGCAAAGGTATCGGATGATTCTGAGAGGGTGGATTACACGGCTGC  Raphanus raphanistrum subsp. landra
EX770284       --> TGCCTTGCAAAGGTATCGGATGATTCTGAGAGGGTGGATTACACGGCTGC  Raphanus raphanistrum subsp. landra

               551    -    601
UN10061        --> TGCTTTTCATCCTGATGGTCTTATTCTCGGAACCGGTACTTCTCAATCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774507       <-- TGCTTTTCATCCTGATGGTCTTATTCTCGGAACCGGTACTTCTCAATCTT  Raphanus raphanistrum subsp. landra
FD555203       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV536285       --> TGCTTTTCATCCTGATGGTCTCATTCTCGGAACCGGTACTTCTCAATCTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FY452297       --> TGCTTTTCATCCTGATGGTCTCATTCTCGGAACCGGTACTTCTCAATCTG  Raphanus sativus cv GSK3-1
FY454650       --> TGCTTTTCATCCTGATGGTCTCATTCTCGGAACCGGTACTTCTCAATCTG  Raphanus sativus cv GSK3-1
FD559508       --> TGCTTTTCATCCTGATGGTCTTATTCTCGGAACCGGTACTTCTCAATCTG  Raphanus raphanistrum subsp. landra
EX770284       --> TGCTTTTCATCCTGATGGTCTTATTCTCGGAACCGGTACTTCTCAATCTT  Raphanus raphanistrum subsp. landra

               601    -    651
UN10061        --> TTGTTAAGATTTGGGATGTTAAGAGTCAGGCAAATGTGGCGAAGTTTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774507       <-- TTGTTAAGATTTGGGATGTTAAGAGTCAGGCAAATGTGGCGAAGTTTGAT  Raphanus raphanistrum subsp. landra
FD555203       <-- .................................................T  Raphanus raphanistrum subsp. landra
EV536285       --> TTGTTAAGATTTGGGATGTTAAAAGTCAGGCAAATGTGGCGAAGTTTGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY452297       --> TTGTTAAGATTTGGGATGTTAAAAGTCAGGCAAATGTGGCGAAGTTTGAT  Raphanus sativus cv GSK3-1
FY454650       --> TTGTTAAGATTTGGGATGTTAAAAGTCAGGCAAATGTGGCGAAGTTTGAT  Raphanus sativus cv GSK3-1
FD559508       --> TTGTTAAGATTTGGGATGTTAAGAGTCAGGCAAATGTGGCGAGGTTTGAT  Raphanus raphanistrum subsp. landra
EX770284       --> TTGTTAAGATTTGGGATGTTAAGAGTCAGGCAAATGTGGCGAAGTTTGAT  Raphanus raphanistrum subsp. landra

               651    -    701
UN10061        --> GGACACACCGGTGAAGTTACCTCTATATCTTTCTCTGAGAATGGTTATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774507       <-- GGACACACCGGTGAAGTTACCTCTATATCTTTCTCTGAGAATGGTTATTT
FD555203       <-- GGACACACCGGTGAAGTTACCTCTATATCTTTCTCTGAGAATGGTTATTT
EV536285       --> GGACACACCGGTGAAGTTACCTCTATATCTTTCTCTGAGAATGGTTATTT
FY452297       --> GGACACACCGGTGAAGTTACCTCTATATCTTTCTCTGAGAATGGTTATTT
FY454650       --> GGACACACCGGTGAAGTTACCTCTATATCTTTCTCTGAGAATGGTTATTT
FD559508       --> GGACACACCGGTGAAGTTACCTCTATATCTTTCTCTGAGAATGGTTATTT
EX770284       --> GGACACACCGGTGAAGTTACCTCTATATCTTTCTCTGAGAATGGTTATTT

               701    -    751
UN10061        --> CCTCGCGACTGCTGCCGAGGATGGTGTTAGGTTGTGGGACCTGCGCAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774507       <-- CCTCGCGACTGCTGCCGAGGATGGTGTTAGGTTGTGGGACCTGCGCAAGT
FD555203       <-- CCTCGCGACTGCTGCCGAGGATGGTGTTAGGTTGTGGGACCTGCGCAAGT
EV536285       --> CCTCGCGACTGCTGC...................................
FY452297       --> CCTCGCGACTGCTGCCGAGGATGGTGTTAGGTTGTGGGACCTGCGCAAGT
FY454650       --> CCTCGCGACTGCTGCCGAGGATGGTGTTAGGTTGTGGGACCTGCGCAAGT
FD559508       --> CCTCGCGACTGCTGCCGAGGATGGTGTTAGGTTGTGGGACCTGCGCAAGT
EX770284       --> CCTCGCGACTGCTGCCGAGGATGGTGTTAGGTTGTGGGACCTGCGCAAGT

               751    -    801
UN10061        --> TAAGGAACTTCAAGTCATTCTTATCCGCAGATGCAAACTCTGTGGAGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774507       <-- TAAGGAACTTCAAGTCATTCTTATCCGCAGATGCAAACTCTGTGGAGTTT
FD555203       <-- TAAGGAACTTCAAGTCATTCTTATCCGCAGATGCAAACTCTGTGGAGTTT
EV536285       --> ..................................................
FY452297       --> TAAGGAACTTCAAGTCATTCCTATCCGCAGATGCAAACTCTGTGGAGTTT
FY454650       --> TAAGGAACTTCAAGTCATTCCTATCCGCAGATGCAAACTCTGTGGAGTTT
FD559508       --> TAAGGAACTTCAAGTCATTCTTATCCGCAGATGCAAACTCTGTGGAGTTT
EX770284       --> TAAGGAACTTCAAGTCATTCTTATCCGCAGATGCAAACTCTGTGGAGTTT

               801    -    851
UN10061        --> GACCCTAGCGGATCTTATCTTGGAGTTGCTGCATCAGATATCAGGCTATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774507       <-- GACCCTAGCGGATCTTATCTTGGAGTTGCTGCATCAGATATCAGGCTATA
FD555203       <-- GACCCTAGCGGACCTTATCTTGGAGTTGCTGCATCAGATATCAGGCTATA
EV536285       --> ..................................................
FY452297       --> GACCCTAGCGGATCTTATCTTGGTGTTGCTGCATC...............
FY454650       --> GACCCTAGCGGATCTTATCTTGGTGTTGCTGCATCAGATATCAGGCTATA
FD559508       --> GACCCTAGCGGACCTTATCTTGGAGTTGCTGCATCAGATATCAGGCTATA
EX770284       --> GACCCTAGCGGATCTTATCTTGGAGTTGCTGCATCAGATATCAGGCTATA

               851    -    901
UN10061        --> CCAGACGGCGAGTGTGAAAGCTGAATGGAACCTTATTAAGACACTCCCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774507       <-- CCAGACGGCGAGTGTGAAAGCTGAATGGAACCTTATTAAGACACTCCCTG
FD555203       <-- CCAGACGGCGAGTGTGAAAGCTGAATGGAACCTTATTAAGACACTCCCTG
EV536285       --> ..................................................
FY452297       --> ..................................................
FY454650       --> CCAGACGGCGAGTGTGAAAGCTGAATGGAACCTTATTAAGACACTCCCTG
FD559508       --> CCAGACGGCGAGTGTGAAAGCTGAATGGAACCTTATTAAGACACTCCCTG
EX770284       --> CCAGACGGCGAGTGTGAAAGCTGAATGGAACCTTATTAAGACACTCCCTG

               901    -    951
UN10061        --> ATCTCTCCGGCACTGGTAAAGCTACATGTGTGAAGTTTGGTCCAGATGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774507       <-- ATCTTTCCGGCACTGGTAAAGCTACATGTGTGAAGTTTGGTCCAGATGCA
FD555203       <-- ATCTCTCCGGCACTGGTAAAGCTACATGTGTGAAGTTTGGTCCAGATGCA
EV536285       --> ..................................................
FY452297       --> ..................................................
FY454650       --> ATCTCTCCGGCACTGGTAAAGCTACATGTGTGAAGTTTGGT.........
FD559508       --> ATCTCTCCGGCACTGGTAA...............................
EX770284       --> ATCTCTCCGGCACTGGTAAAGCTACATGTGTGAAGTTTGGTCCAGATGCA

               951    -   1001
UN10061        --> CAATACGTTGCAGTTGGTTCCATGGACCGTAACCTACGAATATTTGGTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774507       <-- CAATACGTTGCAGTTGGTTCCATGGACCGTAACCTACGAATATTTGGTCT
FD555203       <-- CAATACGTTGCAGTTGGTTCCATGGACCGTAACCTACGAATATTTGGTCT
EV536285       --> ..................................................
FY452297       --> ..................................................
FY454650       --> ..................................................
FD559508       --> ..................................................
EX770284       --> CAATACGTTGCAGTTGGTTCCATGGACCGTAACCTACGAATATTTGGTCT

               1001   -   1051
UN10061        --> TCCTGGTGACCAAACAGCCAATGCCGATGATGACTCTGCACAAGACTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774507       <-- TCCTGGTGACCAAACAGCCAATGCCGATGATGACTCTGCACAAGACTCTT
FD555203       <-- TCCTGGTGACCAAACAGCCAATGCCGATGATGACTCTGCACAAGACTCTT
EV536285       --> ..................................................
FY452297       --> ..................................................
FY454650       --> ..................................................
FD559508       --> ..................................................
EX770284       --> TCCTGGTGACCAAACAGCCAATGCCGATGATGACTCTGCACAAGACTCTT

               1051   -   1101
UN10061        --> GAAGA-TTCG--AGAAA-CTCGGCAA-TTTTCGA-TGTTCATCTCCGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774507       <-- GAAGAATTCG--AGAAAACTCGGCAAATTTTCGAATGTTCATCTCCGGTT
FD555203       <-- GAAGAATTCGTTAGAAAACTCGGCAAATTTTCGAATGTTCATCTCCGGTT
EV536285       --> ..................................................
FY452297       --> ..................................................
FY454650       --> ..................................................
FD559508       --> ..................................................
EX770284       --> GAAGA-TTCG--AGAAA-CTCGGCAA-TTTTCGA-TGTTCATCTCCGGTT

               1101   -   1151
UN10061        --> -CT-CTCTCTCT-CTGT-GTATC-TACAGTTT-CACAGCTATAAGGAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774507       <-- TCTTCTCTCTCTTCTGTTGTATCCTACAGTTTTCACAGCTATAAGGAGGA
FD555203       <-- TCTTCTCTCTCTTCTGTTGTATCCTACAGTTTTCACAGCTATAAGGAGGA
EV536285       --> ..................................................
FY452297       --> ..................................................
FY454650       --> ..................................................
FD559508       --> ..................................................
EX770284       --> -CT-CTCTCTCT-CTGT-GTATC-TACAGTTT-CACAGCTATA.......

               1151   -   1201
UN10061        --> TTTGTTAGTTGGCATAGTGATCTTCGTTACTTCTCTGAACGCAGACGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774507       <-- TTTGTTAGTTGGCATAGTGATCTTCGTTACTTCTCTGAACGCAGACGATC
FD555203       <-- TTTGTTAGTTGGCATAGTGATCTTCGTTACTTCTCTGAACGCAGACGATC
EV536285       --> ..................................................
FY452297       --> ..................................................
FY454650       --> ..................................................
FD559508       --> ..................................................
EX770284       --> ..................................................

               1201   -   1251
UN10061        --> ACACTTGAGTTTTCTTACTCTTTTCATCTTATAGGTTCTTCCAAAGTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774507       <-- ACACTTGAGTTTTCTTACTCTTTTCATCTTATAGGTTCTTCCAAAGTTCT
FD555203       <-- ACACTTGAGTTTTCTTACTCTTTTCATCTTATAGGTTCTTCCAAAGTTCT
EV536285       --> ..................................................
FY452297       --> ..................................................
FY454650       --> ..................................................
FD559508       --> ..................................................
EX770284       --> ..................................................

               1251   -   1301
UN10061        --> AATCTCTATCTCCCTCTTTGTACCTTCGAAACATGTACCAAATTGTTCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774507       <-- ..................................................
FD555203       <-- AATCTCTATCTCCCTCTTTGTACCTTCGAAACATGTACCAAATTGTTCAT
EV536285       --> ..................................................
FY452297       --> ..................................................
FY454650       --> ..................................................
FD559508       --> ..................................................
EX770284       --> ..................................................

               1301   -   1351
UN10061        --> TTTGCTGCTAAGGATCGGATCTAAATGAAACTAAGACGTTTTATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX774507       <-- .............................................
FD555203       <-- TTTGCTGCTAAGGATCGGATCTAAATGAAACTAAGACGTTTTATC
EV536285       --> .............................................
FY452297       --> .............................................
FY454650       --> .............................................
FD559508       --> .............................................
EX770284       --> .............................................