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Alignment for radish unigene UN10065

               1      -     51
UN10065        --> ACGTGCTTCCTCTGTCTTGCGATGGATACAATTGGCCACAGTGCCAATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD555032       <-- ..................................................
EX775188       <-- ..................................................
FD539715       <-- ..................................................
FY447518       --> ACGTGCTTCCTCTGTCTTGCGATGGATACAATTGGCCACAGTGCCAATGA
FY452810       --> ..................................................
FD559305       --> ..................................................
FD940621       --> ..................................................
FD570453       --> ..................................................
EX771085       --> ..................................................
EX887398       --> ..................................................
FD544020       --> ..................................................

               51     -    101
UN10065        --> TGATTCTATGGAAAGTGTGGAAAACCATCCAGCGGATTTTGATGACGTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD555032       <-- ..................................................
EX775188       <-- ..................................................
FD539715       <-- ..................................................
FY447518       --> TGATTCTATGGAAAGTGTGGAAAACCATCCAGCGGATTTTGATGACGTAA
FY452810       --> ..................................................
FD559305       --> ..................................................
FD940621       --> ..................................................
FD570453       --> ..................................................
EX771085       --> ..................................................
EX887398       --> ..................................................
FD544020       --> ..................................................

               101    -    151
UN10065        --> ATTATCCCCCTGCCGCGACAGCTCAAAGTGCCGATCCTTCTGAACTGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD555032       <-- ..................................................
EX775188       <-- ..................................................
FD539715       <-- ..................................................
FY447518       --> ATTATCCCCCTGCCGCGACAGCTCAAAGTGCCGATCCTTCTGAACTGAAT
FY452810       --> ..................................................
FD559305       --> ..................................................
FD940621       --> ..................................................
FD570453       --> ..................................................
EX771085       --> ..................................................
EX887398       --> ..................................................
FD544020       --> ..................................................

               151    -    201
UN10065        --> TTCAGCAATCAAGCTCAGCAGAGTGCATGCTTCCAGCCAGCGCCTGTTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD555032       <-- ..................................................
EX775188       <-- ..................................................
FD539715       <-- ..................................................
FY447518       --> TTCAGCAATCAAGCTCAGCAGAGTGCATGCTTCCAGCCAGCGCCTGTTCG
FY452810       --> ..................................................
FD559305       --> ..................................................
FD940621       --> ..................................................
FD570453       --> ..................................................
EX771085       --> ..................................................
EX887398       --> ..................................................
FD544020       --> ..................................................

               201    -    251
UN10065        --> TTCTAACGTTGAACCAGGCGTTAGCAGCATAAATGACGGTGAGGAAGTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD555032       <-- ..................................................
EX775188       <-- ..................................................
FD539715       <-- ..................................................
FY447518       --> TTCTAACGTTGAACCAGGCGTTAGCAGCATAAATGACGGTGAGGAAGTAA
FY452810       --> ...............AGGCGTTAGCAGCATAAATGACGGTGAGGAAGTAA
FD559305       --> ...........................gATAAATGACGGTGAGGAAGTAA
FD940621       --> ..................................................
FD570453       --> ..................................................
EX771085       --> ..................................................
EX887398       --> ..................................................
FD544020       --> ..................................................

               251    -    301
UN10065        --> TGAACACAGAGACTGTCACAGCTCAGGGAAGAGACGGGCCGAGTATAGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD555032       <-- ..................................................
EX775188       <-- ..................................................
FD539715       <-- ..................................................
FY447518       --> TGAACACAGAGACTGTCACAGCTCAGGGAAGAGACGGGCCGAGTATAGGC
FY452810       --> TGAACACAGAGACTGTCACAGCTCAGGGAAGAGACGGGCCGAGTATAGGC
FD559305       --> TGAACACAGAGACTGTCACAGCTCAGGGAAGAGACGGGCCGAGTATAGGC
FD940621       --> ..................................................
FD570453       --> ..................................................
EX771085       --> ..................................................
EX887398       --> ..................................................
FD544020       --> ..................................................

               301    -    351
UN10065        --> GTCAGTGGGGGTAGTGTCGGAATGGGTGCAAGTCACGAGGCAGAGATCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD555032       <-- ..................................................
EX775188       <-- ..................................................
FD539715       <-- ..................................................
FY447518       --> GTCAGTGGGGGTAGTGTCGGAATGGGTGCAAGTCACGAGGCAGAGATCCA
FY452810       --> GTCAGTGGGGGTAGTGTCGGAATGGGTGCAAGTCACGAGGCAGAGATCCA
FD559305       --> GTCAGTGGGGGTAGTGTCGGAATG--TGCAAGTCACGAGGCAGAGATCCA
FD940621       --> ...........................................gGATCCA
FD570453       --> ..................................................
EX771085       --> ..................................................
EX887398       --> ..................................................
FD544020       --> ..................................................

               351    -    401
UN10065        --> CGGAGCTGACGTTTCAGTCCATAGGGGAGATAGCGTTGTTGGGGACATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD555032       <-- ..................................................
EX775188       <-- ..................................................
FD539715       <-- ..................................................
FY447518       --> CGGAGCTGACGTTTCAGTCCATAGGGGAGATAGCGTTGTTGGGGACATGG
FY452810       --> CGGAGCTGACGTTTCAGTCCATAGGGGAGATAGCGTTGTTGGGGACATGG
FD559305       --> CGGAGCTGACGTTTCAGTCCATAGGGGAGATAGCGTTGTTGGGGACATGG
FD940621       --> CGGAGCTGACGTTTCAGTCCATAGGGGAGATAGCGTTGTTGGGGACATGG
FD570453       --> ..................................................
EX771085       --> ..................................................
EX887398       --> ..................................................
FD544020       --> ..................................................

               401    -    451
UN10065        --> AACCAGTTGCGGAAGTCATAGAAAATCTAGGACAATGCGGTGAATTTGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD555032       <-- ..................................................
EX775188       <-- ..................................................
FD539715       <-- ..................................................
FY447518       --> AACCAGTTGCGGAAGTCATAGAAAATCTAGGACAATGCGGTGAATTTGCA
FY452810       --> AACCAGTTGCGGAAGTCATAGAAAATCTAGGACAATGCGGTGAATTTGCA
FD559305       --> AACCAGTTGCGGAAGTCATAGAAAATCTAGGACAATGCGGTGAATTTGCA
FD940621       --> AACCAGTTGCGGAAGTCATAGAAAATCTAGGACAATGCGGTGAATTCGCA
FD570453       --> .............................GGACAAAGCGGTGAATTTGCA
EX771085       --> ..................................................
EX887398       --> ..................................................
FD544020       --> ..................................................

               451    -    501
UN10065        --> CCAGACCAAGGCGTTACTGATGATTTCGTTCCTGAGGAAATGGACAGGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD555032       <-- ..................................................
EX775188       <-- ..................................................
FD539715       <-- ..................................................
FY447518       --> CCAGACCAAGGCGTTACTGATGATTTTGTTCCTGAGGAAATGGACAGGGA
FY452810       --> CCAGACCAAGGCGTTACTGATGATTTTGTTCCTGAGGAAATGGACAGGGA
FD559305       --> CCAGACCAAGGCGTTACTGATGATTTCGTTCCTGAGGAAATGGACCGGGA
FD940621       --> CCAGACCAAGGCGTTACTGATGATTTCGTTCCTGAGGAAATGGACAGGGA
FD570453       --> CCAGACCAAGGCGTTACTGATGATTTCGTTCCTGAGGAAATGAACCGGGA
EX771085       --> ..................................................
EX887398       --> ..................................................
FD544020       --> ..................................................

               501    -    551
UN10065        --> AGGTAGTAGGCTCGGGGATATTCAGGACAGGGTGTCTCAGTCCGTTGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD555032       <-- ..................................................
EX775188       <-- ..................................................
FD539715       <-- ..................................................
FY447518       --> AGGTAGTAGGCTCGGGGATATTCAGGACAGGGTGTCTCAGTCCGTTGCAA
FY452810       --> AGGTAGTAGGCTCGGGGATATTCAGGACAGGGTGTCTCAGTCCGTTGCAA
FD559305       --> AGGTAGTAGGCTCGGGGATATTCAGGACAGGGTGTCTCAGTCCGTTGCAA
FD940621       --> AGGTAGTAGGCTCGGGGATATTCAGGACAGGGTGTCTCAGTCCGTTGCAA
FD570453       --> AGGTAGTAGGCTCGGGGATATTCAGGACAGGGTGTCTCAGTCCGTTGCAA
EX771085       --> ..................................................
EX887398       --> ..................................................
FD544020       --> ..................................................

               551    -    601
UN10065        --> GGGCGGACAGTGGCTCTAAAATCGTTGATTCATTGAAGGCTGAATCTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD555032       <-- ......................CGTTGATTCATTGAAGGCTGAATCTGTT  Raphanus raphanistrum subsp. landra
EX775188       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD539715       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY447518       --> GGGCGGACAGTGGCTCTAAAATCGTTGATTCGTTGAAGGCTGAATCTGTT  Raphanus sativus cv GSK3-1
FY452810       --> GGGCGGACAGTGGCTCTAAAATCGTTGATTCGTTGAAGGCTGAATCTGTT  Raphanus sativus cv GSK3-1
FD559305       --> GGGCGGACAGTGGCTCTAAAATCGTTGATTCATTGAAGGCTGAATCTGTT  Raphanus raphanistrum subsp. landra
FD940621       --> GGGCGGACAGTGGCTCTAAAATCGTTGATTCGTTGAAGGCTGAATCTGTT  Raphanus sativus var. oleiformis
FD570453       --> GGGCGGACAGTGGCTCTAAAATCGTTGATTCATTGAAGGCTGAATCTGTT  Raphanus sativus cv Early Scarlet Globe
EX771085       --> ..GCGGACAGTGGCTCTAAAATCGTTGATTCATTGAAGGCTGAATCTGTT  Raphanus raphanistrum subsp. landra
EX887398       --> ...........GGCTCTAAAATCGTTGATTCATTGAAGGCTGAATCTGTT  Raphanus sativus var. oleiformis
FD544020       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               601    -    651
UN10065        --> GAAAGCGGTGAAAAGATGAGCAACGTAAATGCGTTGATGAACGAAGATAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD555032       <-- GAAAGCGGTGAAAAGATGAGCAACGTAAATGCGTTGATGAACGAAGATAG  Raphanus raphanistrum subsp. landra
EX775188       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD539715       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FY447518       --> GAAAGCGGCGAA......................................  Raphanus sativus cv GSK3-1
FY452810       --> GAAAGCGGCGAAAAGATGAGCAACGTAAATGCGTTGATGAACGAAGATAG  Raphanus sativus cv GSK3-1
FD559305       --> GAAAGCGGTGAAAAGATGAGCAACGTAAATGCGTTGATGAACGAAGATAG  Raphanus raphanistrum subsp. landra
FD940621       --> GAAAGCGGCGAAAAGATGAGCAACGTAAATGCGTTGATGAACGAAGATAG  Raphanus sativus var. oleiformis
FD570453       --> GAAAGCGGTGAAAAGATGAGCAACGTAAATGCGTTGATGAACGAAGATAG  Raphanus sativus cv Early Scarlet Globe
EX771085       --> GAAAGCGGTGAAAAGATGAGCAACGTAAATGCGTTGATGAACGAAGATAG  Raphanus raphanistrum subsp. landra
EX887398       --> GAAAGCGGCGAAAAGATGAGCAACGTAAATGCGTTGATGAACGAAGATAG  Raphanus sativus var. oleiformis
FD544020       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               651    -    701
UN10065        --> TGTTCACCCATCATTGTCGTGCAATGCGATTGTGTGTTCTGGTTTTGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD555032       <-- TGTTCACCCATCATTGTCGTGCAATGCGATTGTGTGTTCTGGTTTTGAAG
EX775188       <-- ......................AATGCGATTGTGTGTTCTGGTTTTGAAG
FD539715       <-- ..................................................
FY447518       --> ..................................................
FY452810       --> TGTTCACCCATCATTGTCGTGCAATGCGATTGTGTGTTCTGGTTTTGAAG
FD559305       --> TGTTCACCCATCATTGTCGTGCAATGCGATTGTGTGTTCTGGTTTTGAAG
FD940621       --> TGTTCACCCATCATTGTCGTGCAATGCGATTGTGTGTTCTGGTTTTGAAG
FD570453       --> TGTTCACCCATCATTGTCGTGCAATGCGATTGTGTGTTCTGGTTTTGAAG
EX771085       --> TGTTCACCCATCATTGTCGTGCAATGCGATTGTGTGTTCTGGTTTTGAAG
EX887398       --> TGTTCATCCATCATTGTCGTGCAATGCGATTGTGTGTTCTGGTTTTGAAG
FD544020       --> ..................................................

               701    -    751
UN10065        --> CATCTAAAGAAGAAGTGACCCAGACGTGGAACGAGTCTCCGCTCAACGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD555032       <-- CATCTAAAGAAGAAGTGACCCAGACGTGGAACGAGTCCTCGCTCAACGCT
EX775188       <-- CATCTAAAGAAGAAGTGACCCAGATGTGGAACGAGTCTCCGCTCAACGCT
FD539715       <-- ..................................................
FY447518       --> ..................................................
FY452810       --> CATCTAAAGAAGAAGTGACCCAGACGTGGAACGAGTCTCCGCTCAACGCT
FD559305       --> CATCTAAAGAAGAAGTGACCCAGACGTGGAACGAGTCCTCGCTCAACGCT
FD940621       --> CATCTAAAGAAGAAGTGACCCAGACGTGGAACGAGTCTCCGCTCAACGCT
FD570453       --> CATCTAAAGAAGAAGTGACCCAGACGTGGAACGAGTCTCCGCTCAACGCT
EX771085       --> CATCTAAAGAAGAAGTGACCCAGATGTGGAACGAGTCTCCGCTCAACGCT
EX887398       --> CATCTAAAGAAGAAGTGACACAGACATGGAACGAGTCTCCGCTCAACGCT
FD544020       --> ..................................................

               751    -    801
UN10065        --> GGCTTTGCACTCCCTGGATCAAGTTACACTGCTAATGACCAAGGACCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD555032       <-- GGCTTTGCACTCCCTGGATCAAGTTACACTGCTAATGACCAAGGACCTCC
EX775188       <-- GGCTTTGCACTCCCTGGATCAAGTTACACTGCTAATGACCAAGGACCTCC
FD539715       <-- ..................................................
FY447518       --> ..................................................
FY452810       --> GGCTTTGCACTCCCTGGATCAAGTTACACTGCTAATGACCAAGGACCTCC
FD559305       --> GGCTTTGCACTCCCTGGATCAAGTTACACTGCTAATGACCAAGGACCTCC
FD940621       --> GGCTTTGCACTCCCTGGATCAAGTTACACTGCTAATGACCAAGGACCTCC
FD570453       --> GGCTTTGCACTCCCTGGATCAAGTTACACTGCTAATGACCAAGGACCTCC
EX771085       --> GGCTTTGCACTCCCTGGATCAAGTTACACTGCTAATGACCAAGGACCTCC
EX887398       --> GGCTTTGCACTCCCTGGATCAAGTTACACTGCTAATGATCAAGGGCCTCC
FD544020       --> ..................................................

               801    -    851
UN10065        --> GAACGGAGATAGCAACGATGAAATTGTGGAATTTGATCCAATAAAGTATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD555032       <-- GAACGGAGATAGCAACGATGAAATTGTGGAATTTGATCCAATAAAGTATC
EX775188       <-- GAACGGAGATAGCAACGATGAAATTGTGGAATTTGATCCAATAAAGTATC
FD539715       <-- ..................gGAAATTGTGGAATTTGACCCAATAAAGTATC
FY447518       --> ..................................................
FY452810       --> GAACGGAGATAGCAACGATGAAATTGTGGAATTTGATCCAATAAAGTATC
FD559305       --> GAACGGAGATAGCAACGATGAAATTGTGGAATTTGATCCAATAAAGTATC
FD940621       --> GAACGGAGATAGCAATGATGAAATTGTGGAATTTGATCCAATAAAGTATC
FD570453       --> GAACGGAGATAGCAACGATGAAATTGTGGAATTTGATCCAATAAAGTATC
EX771085       --> GAACGGAGATAGCAACGATGAAATTGTGGAATTTGATCCAATAAAGTATC
EX887398       --> GAACGGAGATAGCAATGATGAAATTGTGGAATTTGACCCAATAAAGTATC
FD544020       --> ..................gGAAATTGTGGAATTTGACCCAATAAAGTATC

               851    -    901
UN10065        --> ACAACTGTTACTGCCCTTGGGTAAATGAAAACGTGGCTGCTGCTGGATGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD555032       <-- ACAACTGTTACTGCCCTTGGGTAAATGAAAACGTGGCTGCTGCTGGATGT
EX775188       <-- ACAACTGTTACTGCCCTTGGGTAAATGAAAACGTGGCTGCTGCTGGATGT
FD539715       <-- ACAACTGTTACTGCCCTTGGGTAAATGAAAACGTGGCTGCTGCTGGATGT
FY447518       --> ..................................................
FY452810       --> ACAACTGTTACTGCCCTTGGGTAAATGAAAATGTGGCTGCTGCTGGATGT
FD559305       --> ACAACTGTTACTGCCCTTGGGTAAATGAAAACGTGGCTGCTGCTGGATGT
FD940621       --> ACAACTGTTACTGCCCTTGGGTAAATGAAAATGTGGCTGCTGCTGGATGT
FD570453       --> ACAACTGTTACTGCCCTTGGGTAAATGAAAATGTGGCTGCTGCTGGATGT
EX771085       --> ACAACTGTTACTGCCCTTGGGTAAATGAAAACGTGGCTGCTGCTGGATGT
EX887398       --> ACAACTGTTACTGCCCTTGGGTAAATGAAAACGTGGCTGCTGCTGGATGT
FD544020       --> ACAACTGTTACTGCCCTTGGGTAAATGAAAACGTGGCTGCTGCTGGATGT

               901    -    951
UN10065        --> AGCAGCAACAGCTCGAGCTCTTCAAGTATCGCTGAGGCGCTTTGTGGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD555032       <-- AGCAGCAACAGCTCGAGCTCTTCAAGTATCGCTGAGGCGCTTTGTGGATG
EX775188       <-- AGCAGCAACAGCTCGAGCTCTTCAAGTATCGCTGAGGCGCTTTGTGGATG
FD539715       <-- AGCAGCAACAGCTCGAGCTCTTCAAGTATCGCTGAGGCGCTTTGTGGATG
FY447518       --> ..................................................
FY452810       --> AGCAGCAACAGCTCGAGCTCTTCAAGTATCGCTGAGGCGCTTTGTGGATG
FD559305       --> AGCAGCAACAGCTCGAGCTCTTCAAGTATCGCTGAG-CGCTTTGTGGATG
FD940621       --> AGCAGCAACAGCTCGAGCTCTTCAAGTATCGCTGAGGCGCTTTGTGGATG
FD570453       --> AGCAGCAACAGCTCGAGCTCTTCAAGTATCGCTGAGGCGCTTTGTGGATG
EX771085       --> AGCAGCAACAGCTCGAGCTCTTCAAGTATCGCTGAGGCGCTTTGTGGATG
EX887398       --> AGCAGCAACAGCTCGAGCTCTTCAAGTATCGCTGAGGCGCTTTGTGGATG
FD544020       --> AGCAGCAACAGCTCGAGCTCTTCAAGTATCGCTGAGGCGCTTTGTGGATG

               951    -   1001
UN10065        --> GCAATTAACTCTCGATGCCCTTGATTCGTTCCAGTCACTCGAGAATGCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD555032       <-- GCAATTAACTCTCGATGCCCTTGATTCGTTCCAGTCACTCGAGACTGCTC
EX775188       <-- GCAATTAACTCTCGATGCCCTTGATTCGTTCCAGTCACTCGAGAATGCTC
FD539715       <-- GCAATTAACTCTCGATGCCCTTGATTCGTTCCAGTCGCTCGAGAATGCTC
FY447518       --> ..................................................
FY452810       --> GCAATTAACTCTCGATGCCCTTGATTCGTTCCAGTCACTCGAGAATGCTC
FD559305       --> GCAATTAACTCTCGATGCCCTTGATTCGTTCCAGTCACTCGAGACTGCTC
FD940621       --> GCAATTAACTCTCGATGCCCTGGATTCGTTCCAGTCACTCGAGAATGCTC
FD570453       --> GCAATTAACTCTCGATGCCCTTGATTCGTTCCAGTCACTCGAGAATGCTC
EX771085       --> GCAATTAACTCTCGATGCCCTTGATTCGTTCCAGTCACTCGAGAATGCTC
EX887398       --> GCAATTAACTCTCGATGCCCTTGATTCGTTCCAGTCGCTCGAGAATGCTC
FD544020       --> GCAATTAACTCTCGATGCCCTTGATTCGTTCCAGTCGCTCGAGAATGCTC

               1001   -   1051
UN10065        --> AAATCCAACCAATGGAATCAGAATCAGCTGCATCTCTTTGCAAGGATGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD555032       <-- AAATCCAACCAATGGAATCAGAATCAGCTGCATCTCTTTGCAAGGATGAT
EX775188       <-- AAATCCAACCAATGGAATCAGAATCAGCTGCATCTCTTTGCAAGGATGAT
FD539715       <-- AAATCCAACCAATGGAATCAGAATCAGCTGCATCTCTTTGCAAGGATGAT
FY447518       --> ..................................................
FY452810       --> AAATCCAAC-AATGGAATCAGAATCAGCTGCATCTCTTTGCAAGGATGAT
FD559305       --> AAtcca............................................
FD940621       --> AAATCCAACCAATGGAATCAGAATCAGCTGCATCTCTTTGCAAGGATGAT
FD570453       --> AAATCCAACCAATGGAATCAGAATCAGCTGCATCTCTTTGCAAGGATGAT
EX771085       --> AAATCCAACCAATGGAATCAGAATCAGCTGCATCTCTTTGCAAGGATGAT
EX887398       --> AAATCCAACCAATGGAATCAGAATCAGCTGCATCTCTTTGCAAGGATGAT
FD544020       --> AAATCCAACCAATGGAATCAGAATCAGCTGCATCTCTTTGCAAGGATGAT

               1051   -   1101
UN10065        --> CACCGCACTCCTTCCCAGAAGCTCTTGAAACGCCACTCTTTTATCAGCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD555032       <-- CACCGCACTCCTTCCCAGAAGCTCTTGAAACGCCACTCTTTTATCAGCCG
EX775188       <-- CACCGCACTCCTTCCCAGAAGCTCTTGAAACGCCACTCTTTTATCAGCCG
FD539715       <-- CACCGCACTCCTTCCCAGAAGCTCTTGAAGCGCCACTCTTTTATCAGCCG
FY447518       --> ..................................................
FY452810       --> CACCGCAC..........................................
FD559305       --> ..................................................
FD940621       --> CACCGCACTCCTTCC-AGAAGCTCTTGAAACGCCACTCTTTTATCAGCCG
FD570453       --> CACCGCACTCCTTCCCAGAAGCTCTTGAAACGCCACTCTTTTATCAGCCG
EX771085       --> CACCGCACTCCTTCCCAGAAGCTCTTGAAACGCCACTCTTTTATCAGCCG
EX887398       --> CACCGCACTCCTCCCCAGAAGCTCTTGAAACGCCACTCTTTTATCAGCCG
FD544020       --> CACCGCACTCCTTCCCAGAAGCTCTTGAAGCGCCACTCTTTTATCAGCCG

               1101   -   1151
UN10065        --> CCATGGGAAAAAATAAGAAATCTAATTGCAAGGTACTATTGCAAAAA--G
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD555032       <-- CCATGGGAAAAAATAAGAAATCTAATTGCAAGGTACTATTGCAAAAA--G  Raphanus raphanistrum subsp. landra
EX775188       <-- CCATGGGAAAAAATAAGAAATCTAATTGCAAGGTACTATTGCAAAAA--G  Raphanus raphanistrum subsp. landra
FD539715       <-- CCATGGGAAAAAATAAGAAATCTAATTGCAAGGTACTATTGCAAAAA-AG  Raphanus raphanistrum subsp. raphanistrum (MS)
FY447518       --> ..................................................  Raphanus sativus cv GSK3-1
FY452810       --> ..................................................  Raphanus sativus cv GSK3-1
FD559305       --> ..................................................  Raphanus raphanistrum subsp. landra
FD940621       --> CCATGGAAAAAA......................................  Raphanus sativus var. oleiformis
FD570453       --> CCATGGGAAAAA-TAAGAAATCTAATTGCAAGGTACTATTGCAAAAA--G  Raphanus sativus cv Early Scarlet Globe
EX771085       --> CCATGGGAAAAAATAAGAAATCTAATTGCAAGGTACTATTGCAAAAA--G  Raphanus raphanistrum subsp. landra
EX887398       --> CCATGGGAAAAAATAAGAAATCTAATTGCAAGGTACTATTGCAAAAAAAG  Raphanus sativus var. oleiformis
FD544020       --> CCATGGGAAAAAATAAGAAATCTAATTGCAAGGTACTATTGCAAAAA-AG  Raphanus raphanistrum subsp. raphanistrum (MS)

               1151   -   1201
UN10065        --> ACACTCGATTTCAGACGATATATA--AATAGACCAGTATGGTCACTGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD555032       <-- ACACTCGATTTCAGACGATATATATAAATAGACCAGTATGGTCACTGGTT  Raphanus raphanistrum subsp. landra
EX775188       <-- ACACTCGATTTCAGACGATATATATAAATAGACCAGTATGGTCACTGGTT  Raphanus raphanistrum subsp. landra
FD539715       <-- ACACTCGATTTCAGACGATATATA--AATAGACCAGTATGGTCACTGCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY447518       --> ..................................................  Raphanus sativus cv GSK3-1
FY452810       --> ..................................................  Raphanus sativus cv GSK3-1
FD559305       --> ..................................................  Raphanus raphanistrum subsp. landra
FD940621       --> ..................................................  Raphanus sativus var. oleiformis
FD570453       --> ACACTCGATTTCAGACGATATATA--AACAGACCAGTATGGTCACTGCTT  Raphanus sativus cv Early Scarlet Globe
EX771085       --> ACACTCGATTTCAGACGATATATATAAATAGACCAGTATGGTCACTGGTT  Raphanus raphanistrum subsp. landra
EX887398       --> ACGTTCGATTTCAGACGATATATA--AATAGACCAGTATGGTCACTGGTT  Raphanus sativus var. oleiformis
FD544020       --> ACACTCGATTTCAGACGATATATA--AATAGACCAGTATGGTCACTGCTT  Raphanus raphanistrum subsp. raphanistrum (MS)

               1201   -   1251
UN10065        --> AGGTTCTTTAGCTTGGGTTTATCTCTTAGCAGTATAAATAAAAGAACTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD555032       <-- AGGTTCTCTAGCTTGGGTTTATCTCTTAGCAGTATAAATAAAAGAACTCT  Raphanus raphanistrum subsp. landra
EX775188       <-- AGGTTCTCTAGCTTGGGTTTATCTCTTAGCAGTATAAATAAAAGAACTCT  Raphanus raphanistrum subsp. landra
FD539715       <-- AGGTTCTTTAGCTTGGGTTCATCTCTTAGCAGTATAAATAAAAGAACTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY447518       --> ..................................................  Raphanus sativus cv GSK3-1
FY452810       --> ..................................................  Raphanus sativus cv GSK3-1
FD559305       --> ..................................................  Raphanus raphanistrum subsp. landra
FD940621       --> ..................................................  Raphanus sativus var. oleiformis
FD570453       --> AGGTTCTTTAGCTTGGGTTCATCTTTTAGCAGTATAAATA..........  Raphanus sativus cv Early Scarlet Globe
EX771085       --> AGGTTCTCTAGCTTGGGTTTATCTCTTAGCAGTATAAATAAAAGA-CTCT  Raphanus raphanistrum subsp. landra
EX887398       --> AGGTTCT...........................................  Raphanus sativus var. oleiformis
FD544020       --> AGGTTCTTTAGCTTGGGTTCATCTCTTAGCAGTATAAATAAAAGAACTCT  Raphanus raphanistrum subsp. raphanistrum (MS)

               1251   -   1301
UN10065        --> GCATAAATCTTTCGGGTCTGCAACCTGTGTTTTTTTCTTTGTTTTTTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD555032       <-- GCATAAATCTTTCGGGTCTGCAACCTGTGTTTTTTTCTTTGTTTTTTTCT
EX775188       <-- GCATAAATCTTTCGGGTCTGCAACCTGTGTTTTTTTCTTTGTTTTTTTCT
FD539715       <-- GCATAAATCTTTCGGGTCTGCAACCTGTGTTTTTTTCTTTGTTTTTTTCT
FY447518       --> ..................................................
FY452810       --> ..................................................
FD559305       --> ..................................................
FD940621       --> ..................................................
FD570453       --> ..................................................
EX771085       --> GCATAA............................................
EX887398       --> ..................................................
FD544020       --> GCATAAATCTTTCGGGTCTGCAACCTGTGTTTTTTTCTTTGTTTTTTTCT

               1301   -   1351
UN10065        --> TCAAGTTTGTGTAGTAGTCAAGTTAAAGATACCTAAACAGAGGTGAGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD555032       <-- TCAAGTTTGTGTAGTAGTCAAGTTAAAGATACCTAAACAGAGGTGAGAGG
EX775188       <-- TCAAGTTTGTGTAGTAGTCAAGTTAAAGATACCTAAACAGAGGTGAGAGG
FD539715       <-- TCAAGTTTGTGTAGTAGTCAAGTTAAAGATACCTAAACAGAGGTGAGAGG
FY447518       --> ..................................................
FY452810       --> ..................................................
FD559305       --> ..................................................
FD940621       --> ..................................................
FD570453       --> ..................................................
EX771085       --> ..................................................
EX887398       --> ..................................................
FD544020       --> TCAAGTTTGTGTAGTAGTCAAGTTAAAGATACCTAAACAGAGGTGAGAGG

               1351   -   1401
UN10065        --> ATGATACTCAATAATCTTTTATATTTGATTCTTGTTTCTAATAATGTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD555032       <-- ATGATACTCAATAATCT--TATATTCGATTCTTGTTTCTgc.........
EX775188       <-- ATGATACTCAATAATCT--TATATTCGATTCTTGTTTCT...........
FD539715       <-- ATGATACTCAATAATCTTTTATATTTGATTCTTGTTTCTAATAATGTTTC
FY447518       --> ..................................................
FY452810       --> ..................................................
FD559305       --> ..................................................
FD940621       --> ..................................................
FD570453       --> ..................................................
EX771085       --> ..................................................
EX887398       --> ..................................................
FD544020       --> ATGATACTCAATAATCTTTTATATTTGATTCTTGTTTCTAATAATGTTTC

               1401   -   1451
UN10065        --> TACCTGCTTGTTCCTGTGTATCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~
FD555032       <-- .........................
EX775188       <-- .........................
FD539715       <-- TACCTGCTTGTTCCTGTGTATCATC
FY447518       --> .........................
FY452810       --> .........................
FD559305       --> .........................
FD940621       --> .........................
FD570453       --> .........................
EX771085       --> .........................
EX887398       --> .........................
FD544020       --> TACCTGCTTGTTCCTGTGTATCATC