Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN10071

               1      -     51
UN10071        --> GGGCGATTACATTAGAATCTCCGATCCTTCCGTGATCCTCGTAATGGCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728190       <-- ....................ggGATCCTTCCGTGATCCTCCTAATGGCTA
EW727633       <-- ..................................................
EV572054       <-- ..................................................
FD575025       <-- ..................................................
FD531792       <-- ..................................................
EX891432       <-- ..................................................
FD536294       --> GGGCGATTACATTAGAATCTCCGATCCTTCCGTGATCCTCGTAATGGCTA
FD571148       --> ......ggACATTAGAATCTCCGATCCTTCCGTGATCCTCCTAATGGCTA
EV567048       --> ..............ggATCTCCGATCCTTCCGTGATCCTCGTAATGGCTA
EW723171       --> ................................................TA
FY433767       --> ..................................................
FY444538       --> ..................................................
EX887241       --> ..................................................

               51     -    101
UN10071        --> CGTATACAGCTGACGACGATTACGACTTCCTCTACAAAGTGGTACTAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728190       <-- CGTATACAGCTGACGACGATTACGACTTCCTCTACAAAGTGGTACTAATC
EW727633       <-- .......AGCTGACGACGATTACGACTTCCTCTACAAAGTGGTACTAATC
EV572054       <-- ........................ACTTCCTCTACAAAGTGGTACTAATC
FD575025       <-- ..................................................
FD531792       <-- ..................................................
EX891432       <-- ..................................................
FD536294       --> CGTATACAGCTGACGACGATTACGACTTCCTCTACAAAGTGGTACTAATC
FD571148       --> CGTATACAGCTGACGACGATTACGACTTCCTCTACAAAGTGGTACTAATC
EV567048       --> CGTATACAGCTGACGACGATTACGACTTCCTCTACAAAGTGGTACTAATC
EW723171       --> CGTATACAGCTGACGACGATTACGACTTCCTCTACAAAGTGGTACTAATC
FY433767       --> .......AGCTGACGACGATTACGATTTCCTCTACAAAGTGGTACTAATC
FY444538       --> .......................gatTTCCTCTACAAAGTGGTACTAATC
EX887241       --> ..................................................

               101    -    151
UN10071        --> GGAGACTCCGGCGTCGGCAAATCCAACCTCCTCTCTCGATTCACACGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728190       <-- GGAGACTCCGGCGTCGGCAAATCCAACCTCCTCTCTCGATTCACACGCAA
EW727633       <-- GGAGACTCCGGCGTCGGCAAATCCAACCTCCTCTCTCGATTCACACGCAA
EV572054       <-- GGAGACTCCGGCGTCGGCAAATCCAACCTCCTCTCTCGATTCACACGCAA
FD575025       <-- ...............................TCTCTCGATTCACACGCAA
FD531792       <-- ..................................................
EX891432       <-- ..................................................
FD536294       --> GGAGACTCCGGCGTCGGCAAATCCAACCTCCTCTCTCGATTCACACGCAA
FD571148       --> GGAGACTCCGGCGTCGGCAAATCCAACCTCCTCTCTCGATTCACACGCAA
EV567048       --> GGAGACTCCGGCGTCGGCAAATCCAACCTCCTCTCTCGATTCACACGCAA
EW723171       --> GGAGACTCCGGCGTCGGCAAATCCAACCTCCTCTCTCGATTCACACGCAA
FY433767       --> GGAGACTCCGGCGTCGGCAAATCCAACCTCCTCTCTCGATTCACACGCAA
FY444538       --> GGAGACTCCGGCGCCTGCAAATCCAACCTCCTCTCTCGATTCACACGCAA
EX887241       --> ..................................................

               151    -    201
UN10071        --> CGAGTTCAGCCTCGAGTCCAAATCCACCATCGGCGTCGAATTCGCCACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728190       <-- CGAGTTCAGCCTCGAGTCCAAATCCACCATCGGCGTCGAATTCGCCACCA
EW727633       <-- CGAGTTCAGCCTCGAGTCCAAATCCACCATCGGCGTCGAATTCGCCACCA
EV572054       <-- CGAGTTCAGCCTCGAGTCCAAATCCACCATCGGCGTCGAATTCGCCACCA
FD575025       <-- CGAGTTCAACCTCGAGTCCAAATCCACCATCGGCGTCGAATTCGCCACCA
FD531792       <-- ..............AGTCCAAATCCACCATCGGCGTCGAATTCGCCACCC
EX891432       <-- ..................................................
FD536294       --> CGAGTTCAGCCTCGAGT.................................
FD571148       --> CGAGTTCAACCTCGAGTCCAAATCCACCATCGGCGTCGAATTCGCCACCA
EV567048       --> CGAGTTCAGCCTCGAGTCCAAATCCACCATCGGCGTCGAATTCGCCACCA
EW723171       --> CGAGTTCAGCCTCGAGTCCAAATCCACCATCGGCGTCGAATTCGCCACCA
FY433767       --> CGAGTTCAGCCTCGAGTCCAAATCCACCATCGGCGTCGAATTCGCCACCA
FY444538       --> CGAGTTCAGCCTCGAGTCCAAATCCACCATCGGCGTCGAATTCGCCACCA
EX887241       --> ..................................................

               201    -    251
UN10071        --> GAACCATTCACGTCGACGACAAAATCGTCAAAGCTCAGATTTGGGACACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728190       <-- GAACCATTCACGTCGACGACAAAATCGTCAAAGCTCAGATTTGGGACACC
EW727633       <-- GAACCATTCACGTCGACGACAAAATCGTCAAAGCTCAGATTTGGGACACC
EV572054       <-- GAACCATTCACGTCGACGACAAAATCGTCAAAGCTCAGATTTGGGACACC
FD575025       <-- GAACCATTCACGTCGACGACAAAATCGTCAAAGCTCAGATTTGGGACACC
FD531792       <-- GAACCATTCACGTCGACGACAAAATCGTCAAGGCTCAGATTTGGGACACC
EX891432       <-- ...................................CAGATTTGGGACACC
FD536294       --> ..................................................
FD571148       --> GAACCATTCACGTCGACGACAAAATCGTCAAAGCTCAGATTTGGGACACC
EV567048       --> GAACCATTCACGTCGACGACAAAATCGTCAAAGCTCAGATTTGGGACACC
EW723171       --> GAACCATTCACGTCGACGACAAAATCGTCAAAGCTCAGATTTGGGACACC
FY433767       --> GAACCATTCACGTCGACGACAAAATCGTCAAAGCTCAGATTTGGGACACC
FY444538       --> GAACCATTCACGTCGACGACAAAATCGTCAAAGCTCAGATTTGGGACACC
EX887241       --> ...................................CAGATTTGGGACACC

               251    -    301
UN10071        --> GCCGGTCAAGAAAGATACCGAGCGATCACTAGCGCATACTATCGAGGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728190       <-- GCCGGT--CGAAAGATACCGAGCGATCACTAGCGCATACTATCGAGGAGC
EW727633       <-- GCCGGTCAAGAAAGATACCGAGCGATCACTAGCTCATACTATCGAGGAGC
EV572054       <-- GCCGGTCAAGAAAGATACCGAGCGATCACTAGCGCATACTATCGAGGAGC
FD575025       <-- GCCGGTCAAGAAAGATACCGAGCGATCACTAGCGCATACTATCGAGGAGC
FD531792       <-- GCCGGTCAAGAAAGATACCGAGCGATCACTAGCGCATACTATCGAGTAGC
EX891432       <-- GCCGGTCAAGAAAGATACCGAGCGATCACTAGCGCATACTATCGAGGAGC
FD536294       --> ..................................................
FD571148       --> GCCGGTCAAGAAAGATACCGAGCGATCACTAGCGCATACTATCGAGGAGC
EV567048       --> GCCGGTCAAGAAAGATACCGAGCGATCACTAGCGCATACTATCGAGGAGC
EW723171       --> GCCGGTC--GAAAGATACCGAGCGATCACTAGCGCATACTATCGAGGAGC
FY433767       --> GCCGGTCAAGAAAGATACCGAGCGATCACTAGCGCATACTATCGAGGAGC
FY444538       --> GCCGGTCAAGAAAGATACCGAGCGATCACTAGCGCATACTATCGAGGAGC
EX887241       --> GCCGGTCAAGAAAGATACCGAGCGATCACTAGCGCATACTATCGAGGAGC

               301    -    351
UN10071        --> TTTAGGAGCATTACTTGTCTACGACGTTACACGGCATGTTACTTTCGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728190       <-- TTTAGGAGCATTACTTGTCTACGACGTTACACGGCATGTTACTTTCGAGA  Raphanus sativus cv Early Scarlet Globe
EW727633       <-- TTTAGGAGCATTACTTGTCTACGATGTTACACGGCATGTTACTTTCGAGA  Raphanus sativus cv Early Scarlet Globe
EV572054       <-- TCTAGGAGCATTACTTGTCTACGACGTTACACGGCACGTGACTTTCGAGA  Raphanus raphanistrum subsp. landra
FD575025       <-- TTTAGGAGCATTACTTGTTTACGACGTTACACGGCATGTTACTTTCGAGA  Raphanus sativus cv Early Scarlet Globe
FD531792       <-- TTTAGGAGCATTACTTGTCTACGACGTTACACGGCATGTTACTTTCGAGA  Raphanus raphanistrum subsp. maritimus
EX891432       <-- TTTAGGAGCATTACTTGTCTACGACGTTACACGGCACGTGACTTTCGAGA  Raphanus sativus var. oleiformis
FD536294       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD571148       --> TTTAGGAGCATTACTTGTCTACGACGTTACACGGCATGTTACTTTCGAGA  Raphanus sativus cv Early Scarlet Globe
EV567048       --> TCTAGGAGCATTACTTGTCTACGACGTTACACGGCACGTGACTTTCGAGA  Raphanus raphanistrum subsp. landra
EW723171       --> TTTAGGAGCAT.......................................  Raphanus sativus cv Early Scarlet Globe
FY433767       --> TTTAGGAGCATTACTTGTCTACGACGTTACACGGCATGTTACTTTCGAGA  Raphanus sativus cv GSK3-1
FY444538       --> TTTAGGAGCATTACTTGTCTACGACGTTACACGGCATGTTACTTTCGAGA  Raphanus sativus cv GSK3-1
EX887241       --> TTTAGGAGCATTACTTGTCTACGACGTTACACGGCACGTGACTTTCGAGA  Raphanus sativus var. oleiformis

               351    -    401
UN10071        --> ACGTCGAGAGATGGCTCAAGGAGCTTAGAGACCACACCGACGCCAACATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728190       <-- ACGTCGAGAGATGGCTCAAGGAGCTTAGAGACCACACCGACGCCAACATT
EW727633       <-- ACGTCGAGAGATGGCTCAAGGAGCTTAGAGACCACACCGACGCCAACATT
EV572054       <-- ACGTCGAGAGATGGCTCAAGGAGCTTAGAGACCACACCGACGCCAACATT
FD575025       <-- ACGTCGAGAGATGGCTCAAGGAGCTTAGAGACCACACCGACGCCAACATT
FD531792       <-- ACGTCGAGAGATGGCTCAAGGAGCTTAGAGACCACACCGACGCCAACATT
EX891432       <-- ACGTCGAGAGATGGCTCAAGGAGCTTAGAGACCACACCGACGCCAACATT
FD536294       --> ..................................................
FD571148       --> ACGTCGAGAGATGGCTCAAGGAGCTTAGAGACCACACCGACGCCAACATT
EV567048       --> ACGTCGAGAGATGGCTCAAGGAGCTTAGAGACCACACCGACGCCAACATT
EW723171       --> ..................................................
FY433767       --> ACGTCGAGAGATGGCTCAAGGAGCTTAGAGACCACACCGACGCCAACATT
FY444538       --> ACGTCGAGAGATGGCTCAAGGAGCTTAGAGACCACACCGACGCCAACATT
EX887241       --> ACGTCGAGAGATGGCTCAAGGAGCTTAGAGACCACACCGACGCCAACATT

               401    -    451
UN10071        --> GTTATTATGCTAGTTGGGAACAAGGCTGATCTGCGTCACCTTAGAGCTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728190       <-- GTTATTATGCTAGTTGGGAACAAGGCTGATCTGCGTCACCT-AGAGCTGT  Raphanus sativus cv Early Scarlet Globe
EW727633       <-- GTTATTATGCTAGTTGGGAACAAGGCTGATCTGCGTCACCTTAGAGCTGT  Raphanus sativus cv Early Scarlet Globe
EV572054       <-- GTTATTATGCTCGTTGGGAACAAGGCTGATCTGCGTCACCTTAGGGCTGT  Raphanus raphanistrum subsp. landra
FD575025       <-- GTTATTATGCTAGTTGGGAACAAGGCTGATCTGCGTCACCTTAGAGCTGT  Raphanus sativus cv Early Scarlet Globe
FD531792       <-- GTTATTATGCTAGTTGGGAACAAGGCTGATCTGCGTCACCTTAGAGCTGT  Raphanus raphanistrum subsp. maritimus
EX891432       <-- GTTATTATGCTCGTTGGGAACAAGGCTGATCTGCGTCACCTTAGGGCTGT  Raphanus sativus var. oleiformis
FD536294       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD571148       --> GTTATTATGCTAGTTGGGAACAAGGCTGATCTGCGTCACCTTAGAGCTGT  Raphanus sativus cv Early Scarlet Globe
EV567048       --> GTTATTATGCTCGTTGGGAACAAGGCTGATCTGCGTCACCTTAGGGCTGT  Raphanus raphanistrum subsp. landra
EW723171       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY433767       --> GTTATTATGCTAGTTGGGAACAAGGCTGATCTGCGTCACCTTAGAGCTGT  Raphanus sativus cv GSK3-1
FY444538       --> GTTATTATGCTAGTTGGGAACAAGGCTGATCTGCGTCACCTTAGAGCTGT  Raphanus sativus cv GSK3-1
EX887241       --> GTTATTATGCTCGTTGGGAACAAGGCTGATCTGCGTCACCTTAGGGCTGT  Raphanus sativus var. oleiformis

               451    -    501
UN10071        --> TTCAACGGAAGATGCTACGGCGTTTGCTGAGAGGGAGAAGACTTTCTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728190       <-- TTCAACGGAAGATGCTACGGCGTTTGCTGAGAGGGAGAAGACTTTCTTTA
EW727633       <-- TTCAACGGAAGATGCTACGGCGTTTGCTGAGAGGGAGAAGACTTTCTTTA
EV572054       <-- TTCCACGGAAGATGCTACGGCGTTTGCTGAGAGG-AAAAGACGTTCTTTA
FD575025       <-- TTCAACGGAAGACGCTACGGCGTTTGCTGAGAGGGAGAAGACTTTCTTTA
FD531792       <-- TTCAACGGAAGATGCTACGGCGTTTGCTGAGAGGGAGAAGACTTTCTTTA
EX891432       <-- TTCAACGGAAGATGCTACGGCGTTTGCTGAGAGGGAGAAGACTTTCTTTA
FD536294       --> ..................................................
FD571148       --> TTCAACGGAAGACGCTACGGCGTTTGCTGAGAGGGAGAAGACTTTCTTTA
EV567048       --> TTCCACGGAAGATGCTACGGCGTTTGCTGAGAGG-AAAAGACGTTCTTTA
EW723171       --> ..................................................
FY433767       --> TTCAACGGAAGATGCTACGGCGTTTGCTGAGAGGGAGAAGACTTTCTTTA
FY444538       --> TTCAACGGAAGATGCTACGGCGTTTGCTGAGAGGGAGAAGACTTTCTTTA
EX887241       --> TTCAACGGAAGATGCTACGGCGTTTGCTGAGAGGGAGAAGACTTTCTTTA

               501    -    551
UN10071        --> TGGAGACGTCCGCATTGGAAGCTTTGAACGTTGAGGATGCTTTCACTCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728190       <-- TGGAGACGTCCGCATTGGAAGCTTTGAACGTTGAGGATGCTTTCACTCAG
EW727633       <-- TGGAGACGTCCGCATTGGAAGCTTTGAACGTTGAGGATGCTTTCACTCAG
EV572054       <-- TGGAGACGTCCGCATTGGAAGCTTTGAACGTTGAGGATGCTTTCACTCAG
FD575025       <-- TGGAGACGTCCGCATTGGAAGCTTTGAACGTTGAGGATGCTTTCACTCAG
FD531792       <-- TGGAGACGTCCGCATTGGAAGCTTTGAACGTTGAGGATGCTTTCACTCAG
EX891432       <-- TGGAGACGTCCGCATTGGAAGCTTTGAACGTTGAGGATGCTTTCACTCAG
FD536294       --> ..................................................
FD571148       --> TGGAGACGTCCGCATTGGAAGCTTTGAACGTTGAGGATGCTTTCACTCAG
EV567048       --> TGGAGACGTCCGCATTGGAAGCTTTGAACGTTGAGGATGCTTTCACTCAG
EW723171       --> ..................................................
FY433767       --> TGGAGACGTCCGCATTGGAAGCTTTGAACGTTGAGGATGCTTTCACTCAG
FY444538       --> TGGAGACGTCCGCATTGGAAGCTTTGAACGTTGAGGATGCTTTCACTCAG
EX887241       --> TGGAGACGTCCGCATTGGAAGCTTTGAACGTTGAGGATGCTTTCACTCAG

               551    -    601
UN10071        --> CTGCTTTCTCAGATATACCGTGTGGCTAGCAAAAGAGCTTTGGATGTTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728190       <-- CTGCTTTCTCAGATATACCGTGTGGCTAGCAAAAGAGCTTTGGATGTTGG
EW727633       <-- CTGCTTTCTCAGATATACCGTGTGGCTAGCAAAAGAGCTTTGGATGTTGG
EV572054       <-- CTGCTTTCTCAGATATACTGTGTGGCTAGCAAAAGAGCTTTGGATGTTGG
FD575025       <-- CTGCTTTCTCAGATATACCGTGTGGCTAGCAAAAGAGCTTTGGATGTTGG
FD531792       <-- CTGCTTTCTCAGATATACCGTGTGACTAGCAAAAGAGCTTTGGATGTTGG
EX891432       <-- CTGCTTTTTCAGATATACCGTGTGGCTAGCAAAAGAGCTTTGGATGTTGG
FD536294       --> ..................................................
FD571148       --> CTGCTTTCTCAGATATACCGTGTGGCTAGCAAAAGAGCTTTGGATGTTGG
EV567048       --> CTGCTTTCTCAGATATACTGTGTGGCTAGCAAAAGAGCTTTGGATGTTGG
EW723171       --> ..................................................
FY433767       --> CTGCTTTCTCAGATATACCGTGTGGCTAGCAAAAGAGCTTTGGATGTTGG
FY444538       --> CTGCTTTCTCAGATATACCGTGTGGCTAGCAAAAGAGCTTTGGATGTTGG
EX887241       --> CTGCTTTCTCAGATATACCGTGTGGCTAGCAAAAGAGCTTTGGATGTTGG

               601    -    651
UN10071        --> TGATGGTGATGATGGTGATCAGTCTGCTCTCCCTAAAGGACAGAGTATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728190       <-- TGATGGTGATGATGGTGATCAGTCTGCTCTCCCTAAAGGACAGAGTATTC
EW727633       <-- TGATGGTGATGATGGTGATCAGTCTGCTCTCCCTAAAGGACAGAGTATTC
EV572054       <-- TGATGGTGATGGTGATGATCGGTCTGCTCTCCCTAAAGGACAGAGTGTTG
FD575025       <-- TGATGGTGATGATGGTGATCAGTCTGCTCTCCCTAAAGGACAGAGTATTC
FD531792       <-- TGATGGTGATGATGGTGATCAGTCTGCTCTCCCTAAAGGACAGAGTATTC
EX891432       <-- TGATGGTGATGATGGTGATCAGTCTGCTCTCCCTAAAGGACAGAGTATTC
FD536294       --> ..................................................
FD571148       --> TGATGGTGATGATGGTGATCAGTCTGCTCTCCCTAAAGGACAGAGTATTC
EV567048       --> TGATGGTGATGGTGATGATCGGTCTGCTCTCCCTAAAGGACAGAGTGTTG
EW723171       --> ..................................................
FY433767       --> TGATGGTGATGATGGTGATCAGTCTGCTCTCCCTAAAGGACAGAGTATTC
FY444538       --> TGATGGTGATGATGGTGATCAGTCTGCTCTCCCTAAAGGACAGAGTATTC
EX887241       --> TGATGGTGATGATGGTGATCAGTCTGCTCTCCCTAAAGGACAGAGTATTC

               651    -    701
UN10071        --> ATGTCGGGTCTAAGGGAGATGTGTCTGAGGTTAAGAAGATCGGTTGCTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728190       <-- ATGTCGGGTCTAAGGGAGATGTGTCTGAGGTTAAGAAGATCGGTTGCTGC
EW727633       <-- ATGTCGGGTCTAAGGGAGATGTGTCTGAGGTTAAGAAGATCGGTTGCTGC
EV572054       <-- ATGTCGGGCCTAAGGGAGATGTGTCTGAGGTCAAGAAGATCGGTTGCTGC
FD575025       <-- ATGTCGGGTCTAAGGGAGATGTGTCTGAGGTTAAGAAGATCGGTTGCTGC
FD531792       <-- ATGTCGGGTCTAAGGGAGATGTGTCTGAGGTTAAGAAGATCGGTTGCTGC
EX891432       <-- ATGTCGGGTCTAAGGGAGATGTGTCTGAGGTTAAGAAGATCGGTTGCTGC
FD536294       --> ..................................................
FD571148       --> ATGTCGGGTCTAAGGGAGATGTGTCTGAG-TTAAGA..............
EV567048       --> ATGTCGGGCCTAAGGGAGATGTGTCTGAGGTCAAGAAGATCGGTTGCTGC
EW723171       --> ..................................................
FY433767       --> ATGTCGGGTCTAAGGGAGATGTGTCTGAGGTTAAGAAGATCGGTTGCTGC
FY444538       --> ATGTCGGGTCTAAGGGAGATGTGTCTGAGGTTAAGAAGATCGGTTGCTGC
EX887241       --> ATGTCGGGTCTAAGGGAGATGTGTCTGAGGTTAAGAAGATCGGTTGCTGC

               701    -    751
UN10071        --> TCGAGTTGATCTCAGTTGTTAGAGGAACTATGTGGTTTTGAGTAAATCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728190       <-- TCGAGTTGATCTCAGTTGTTAGAGGAACTATGTGGTTTTGAGTAAATCTA
EW727633       <-- TCGAGTTGATCTCAGTTGTTAGGGGAACTATGTGGTTTTGAGTAAATCTA
EV572054       <-- TCGAGTTGATCGCAGTTGTTAGAGGAACTATGTGGTTTTGAGTAAATCTA
FD575025       <-- TCGAGTTGATCTCAGTTGTTAGAGGAACTATGTGGTTTTGAGTAAATCTA
FD531792       <-- TCGAGTTGATCTCAGTTGTTAGAGGAACTATGTGGTTTTGAGTAAATCTA
EX891432       <-- TCGAGTTGATCTCAGTTGTTAGAGGAACTATGTGGTTTTGAGTAAATCTA
FD536294       --> ..................................................
FD571148       --> ..................................................
EV567048       --> TCGAGTTGATCGCAGTTGTTAGAGGAACTATGTGGTTTTGAGTA......
EW723171       --> ..................................................
FY433767       --> TCGAGTTGATCTCAGTTGTTAGAGGAACTATGTGGTTTTGAGTAAATCTA
FY444538       --> TCGAGTTGATCTCAGTTGTTAGAGGAACTATGTGGTTTTGAGTAAATCTA
EX887241       --> TCGAGTTGATCTCAGTTGTTAGAGGAACTATGTGGTTTTGAGTAAATCTA

               751    -    801
UN10071        --> TGGAACGGATGATGATTCTCCCTTGTCTTGTTACTTTTGGTGTAAGCTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728190       <-- TGGAACGGATGATGATTCTCCCTTGTCTTGTTACTTTTGGTGTAAGCTAG
EW727633       <-- TGGAACGGATGATGATTCTCCCTTGTCTTGTTACTTTTGGTGTAAGCTAG
EV572054       <-- TGGAACGGATGATGATTCTCCCTTGTCTTGTTACTTTTGGTGTAAGCTAG
FD575025       <-- TGGAACGGATGATGATTCTCCCTTGTCTTGTTACTTTTGGTGTAAGCTAG
FD531792       <-- TGGAACGGATGATGATTCTCCCTTGTCTTGTTACTTTTGGTGTAAGCTAG
EX891432       <-- TGGAACGGATGATGATTCTCCCTTGTCTTGTTACTTTTGGTGTAAGCTAG
FD536294       --> ..................................................
FD571148       --> ..................................................
EV567048       --> ..................................................
EW723171       --> ..................................................
FY433767       --> TGGAACGGATGATGATTCTCCCTTGTCTTGTTACTTTTGGTGTAAGCTAG
FY444538       --> TGGAACGGATGATGATTCTCCCTTGTCTTGTTACTTTTGGTGTAAGCTAG
EX887241       --> TGGAACGGATGATGATTCTCCCTTGTCTTGTTACTTTTGGTGTAAGCTAG

               801    -    851
UN10071        --> TTTCTCGGATCCTTATAAATGTTTTATCTATGTGTTACATGATCATATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728190       <-- TTTCTCGGATCCTTATAAATGTTTTATCTATGTGTT..............
EW727633       <-- TTTCTC............................................
EV572054       <-- TTTCTCGGATCCTTATAAATGTTTTATCTATGTGTTACATGATC......
FD575025       <-- TTTCTCGGATCCTTATAAATGTTTTATCTATGTGTTACATGATC......
FD531792       <-- TTTCTCGGATCCTTATAAATGTTTTATCTATGTGTTACATGATCATATTA
EX891432       <-- TTTCTCGGATCCTTATAAATGTTTTATCTATGTGTTACATGATCATATTA
FD536294       --> ..................................................
FD571148       --> ..................................................
EV567048       --> ..................................................
EW723171       --> ..................................................
FY433767       --> TTTCTCGGATCCTTATAAATGTTTTATCTATGTGTTACATGATCATATTA
FY444538       --> TTTCTCGGATCCTTATAAATGTTTTATCTATGTGTTACATGATCATATTA
EX887241       --> TTTCTCGGATCCTTATAAATGTTTTATCTATGTGTTACATGATCATATTA

               851    -    901
UN10071        --> GACAATCTATAAACCATTTATCCCTCTGGTTACATATTGGGCAGATCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728190       <-- ..................................................
EW727633       <-- ..................................................
EV572054       <-- ..................................................
FD575025       <-- ..................................................
FD531792       <-- GACAATCTATAAACCATTTATCCCTCTGGTTACATATTGGGCAGATCAAG
EX891432       <-- GACAATCTATAAACCATTTATCCCTCTGGTTACATATTGGGCAGATCAAG
FD536294       --> ..................................................
FD571148       --> ..................................................
EV567048       --> ..................................................
EW723171       --> ..................................................
FY433767       --> GACAATCTATAAACCATTTATCCCTC........................
FY444538       --> GACAATCTATAAACCATTTATCCCTCTGGTTACATATTGGGCAGATCAAG
EX887241       --> GACAATCTATAAACCATTTATCCCTCTGGTTACATATTGGGCAGATCAAG

               901    -    951
UN10071        --> AACCTGAAGTTTCTGTATAGACTTTCCAAAAGGGTTCTTTTTTTGTTTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728190       <-- ..................................................
EW727633       <-- ..................................................
EV572054       <-- ..................................................
FD575025       <-- ..................................................
FD531792       <-- AACCTGAAGTTTCTGTATAGACTTTCCAAAAGGGTTCTTTTTTTGTTTGG
EX891432       <-- AACCTGAAGTTTCTGTATAGACTTTCCAAAAGGGTTCTTTTTTTGTT...
FD536294       --> ..................................................
FD571148       --> ..................................................
EV567048       --> ..................................................
EW723171       --> ..................................................
FY433767       --> ..................................................
FY444538       --> AACCTGAAGTTTCTGTATAGACTTTCCAAAAGGGTTCTTTTTTTGTTTGG
EX887241       --> AACCTGAAGTTTCTGTATAGACTTTC........................

               951    -   1001
UN10071        --> ACATTGTCTTTTTTGTAACTAAGCCGAGTAATGAAAATGGTTTAGATGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728190       <-- ..................................................
EW727633       <-- ..................................................
EV572054       <-- ..................................................
FD575025       <-- ..................................................
FD531792       <-- ACATTGTCTTTGTTGTAACTAAGCCGAGTAATGAAAATGGTTTAGATGTG
EX891432       <-- ..................................................
FD536294       --> ..................................................
FD571148       --> ..................................................
EV567048       --> ..................................................
EW723171       --> ..................................................
FY433767       --> ..................................................
FY444538       --> ACATTGTCTTTTGTGTAACTAAGCCGAGTAATGAAAATGGTTTAGATGTG
EX887241       --> ..................................................

               1001   -   1051
UN10071        --> T
                   ~
EW728190       <-- .
EW727633       <-- .
EV572054       <-- .
FD575025       <-- .
FD531792       <-- T
EX891432       <-- .
FD536294       --> .
FD571148       --> .
EV567048       --> .
EW723171       --> .
FY433767       --> .
FY444538       --> T
EX887241       --> .