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Alignment for radish unigene UN10079

               1      -     51
UN10079        --> GCCTTCTCTCTAATATCAAATATTAGTTGAATATATAATAATAATAGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX773809       <-- ..................................................
EX905562       <-- ..................................................
EX904273       <-- ..................................................
EY906042       <-- ..................................................
EX777623       --> GCCTTCTCTCTAATACCAAATATTAGTTGAATATATAATAATAA---AAC
EY902329       --> .....CTCTCTAATATCAAATATTAGTTGAATATATAATAATAATAGAAC
EX909257       --> .......................................AATAATAAAAC
EX908204       --> ..................................................

               51     -    101
UN10079        --> ACACTAAAGAGTGGGAAGCATTGATATAATAATAATCTATACAAACTTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX773809       <-- ..................................................
EX905562       <-- ..................................................
EX904273       <-- ..................................................
EY906042       <-- ..................................................
EX777623       --> ACACTAAAGAGTGGGAAGCATTGATATAATAATAATCTATACAAACTTGG
EY902329       --> ATACTAAAGAGTGGGAAGCATTGATATAATAATAATCTATACAAACTTGG
EX909257       --> ACACTAAAGAGTGGGAAGCATTGATATAATAATAATCTATACAAACTTGG
EX908204       --> .........gGTGGGAAGCATTGATATAATAATAATCTATACAAACTTGG

               101    -    151
UN10079        --> CACACCACGCTTAGAAGATAAAACTTCTGCGAAGTTCTTCTTACTTGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX773809       <-- ..................................................
EX905562       <-- ..................................................
EX904273       <-- ..................................................
EY906042       <-- ..................................................
EX777623       --> CACACCACGCTTAGAAGATAAAACTTCTGCGAAGTTCTTCTTACTTGTGA
EY902329       --> CACACCACGCTTAGAAGATAAAACTTCTGCGAAGTTCTTCTTACTTGTGA
EX909257       --> CACACCACGCTTAGAAGATAAAACTTCTGCGAAGTTCTTCTTACTTGTGA
EX908204       --> CACACCACGCTTAGAAGATAAAACTTCTGCGAAGTTCTTCTTACTTGTGA

               151    -    201
UN10079        --> CCTAAGATAATGAACTTTTGATGTTTTTGAATCTTCAGTAACTCCAGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX773809       <-- ..................................................
EX905562       <-- ..................................................
EX904273       <-- ..................................................
EY906042       <-- ..................................................
EX777623       --> CCTAAGATAATGAACTTTTGATGTTTTAGAATCTTCAGTAACTCCAGAAT
EY902329       --> CCTAAGATAATGAACTTTTGATGTTTTTGAATCTTCAGTAACTCCAGAAT
EX909257       --> CCTAAGATAATGAACTTTTGATGTTTTAAAATCTTCAGTAACTCCAGAAT
EX908204       --> CCTAAGATAATGAACTTTTGATGTTTTTGAATCTTCAGTAACTCCAGAAT

               201    -    251
UN10079        --> GGTTCAAGATCGACCGGACCGGTGGAGGAAGATGGAACTTCTTGATGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX773809       <-- ..................................................
EX905562       <-- ..................................................
EX904273       <-- ..................................................
EY906042       <-- ..................................................
EX777623       --> GGTTCAAGATCAACCGGACCGGTGGAGGAAGATGGAACTTCTTGATGATC
EY902329       --> GGTTCAAGATCGACCGGACCGGTGGAGGAAGATGGAACTTCTTGATGATC
EX909257       --> GGTTCAAGATCAACCGGACCGGTGGAGGAAGATGGAACTTCTTGATGATC
EX908204       --> GGTTCAAGATCGACCGGACCGGTGGAGGAAGATGGAACTTCTTGATGATC

               251    -    301
UN10079        --> GAATCCTTTCCTCCCGAATTCAATATTTGATGATGATATATCGGTATTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX773809       <-- ..................................................
EX905562       <-- ..................................................
EX904273       <-- ..................................................
EY906042       <-- ..................................................
EX777623       --> GAATCCTTTCCTCCCGAATTCAATATTTGATGATGATATATCGGTATTAG
EY902329       --> GAATCCTTTCCTCCCAAATTCAATATTTGATGATGATATATCGGTATTAG
EX909257       --> GAATCCTTTCCTCCCGAATTCAATATTTGATGATGATATATCGGTATTAG
EX908204       --> GAATCCTTTCCTCCCATATTCAATATTTGATGATGATATATCGGTATTAG

               301    -    351
UN10079        --> AAACTCCAGTTTCCTGCGAAACACTCAACGTTTTGAAGCTCTGCCTTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX773809       <-- ..................................................
EX905562       <-- ..................................................
EX904273       <-- ..................................................
EY906042       <-- ..................................................
EX777623       --> AAACTCCAGTTTCCTGAGAAACACTCAACGTTTTGAAGCTCTGCCTTCTG
EY902329       --> AAACTCCAGTTTCCTGCGAGACACTCAACGTTTTGAAGCTCTGCCTTCTG
EX909257       --> AAACTCCAGTTTCCTGAAAAACACTCAACGTTTTGAAGCTCTGCCTTCTG
EX908204       --> AAACTCCAGTTTCCTGCGAAACACTCAACGTTTTGAAGCTCTGCCTTCTG

               351    -    401
UN10079        --> TTGTTGTCAAACATGGCTTGAGAAACCGATTGTTCTTGAGCAAGAACCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX773809       <-- .....................GAAACCGATTGTTCT-GAGCAAGA-CCGG
EX905562       <-- ..................................................
EX904273       <-- ..................................................
EY906042       <-- ..................................................
EX777623       --> TTGTTGTCAAACATGGCTTGAGAAACCGATTGTTCTTGAGCAAGAACCGG
EY902329       --> TTATTCTCAAACATGGCTTGAGAAACCGATTGTTCTTGAGTAAGAACCGG
EX909257       --> TTGTTGTCAAACATGGCTTGAGAAACCGATTGTTCTTGAGCAAGAACCGG
EX908204       --> TTGTTCTCAAACATGGCTTGAGAAACCGATTGTTCTTGAGTAAGAACCGG

               401    -    451
UN10079        --> ATCAGAAACATGGAGAGATTGAGGTTGGTATAGTGGAATCGAGCAAAGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX773809       <-- ATCAGAAACATGGAGAGATTGAGGTTGGTATAGTGGA-TCGAGCAAAGGG
EX905562       <-- ......................................TCGAGCAAAGGG
EX904273       <-- ..................................................
EY906042       <-- ..................................................
EX777623       --> ATCAGAAACATGGAGAGATTGAGGTTGGTATAGTGGAATCGAGCAAAGGG
EY902329       --> ATCAGAAACATGGAGAGATTGAGGTTGGTATAGTGGAATCGAGCAAAGGG
EX909257       --> ATCAGAAACATGGAGAGATTGAGGTTGGTATAGTGGAATCGAGCAAAGGG
EX908204       --> ATCAGAAACATGGAGAGATTGAGGTTGGTATAGTGGAATCGAGCAAAGGG

               451    -    501
UN10079        --> CAGGGTTGTTGCTGAAGTAATTGAGTAGTGTTCCTCTGGTTTCAGTTTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX773809       <-- CAGGGTTATTGCTGAAGTAATTGAGTAGTGTTCCTCTGGTTTCAGTTTGG
EX905562       <-- CAGGGT-GTTGCTGAAGTAAT-GAGTAGTGT-CCTCTG-TTTCAGTTTGG
EX904273       <-- ..................................................
EY906042       <-- ..................................................
EX777623       --> CAGGGTTATTGCTGAAGTAATTGAGTAGTGTTCCTCTGGTTTCAGTTTGG
EY902329       --> CAGGGTTGTTGCTGAAGTAATTGAGTAGTGTTCCTCTGGTTTCAGTTTGG
EX909257       --> CAGGGTTGTTGCTGAAGTAATTGAGTAGTGTTCCTCTGGTTTCAGTTTGG
EX908204       --> CAGGGTTGTTGCTGAAGTAATTGAGTAGTGTTCCTCTGGTTTCAGTT-AG

               501    -    551
UN10079        --> TTGGAGAAGCAGGGCACGTAACTCTGTTCGGTCTTGGTTTTGTCATTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX773809       <-- TTGGAGAAGCAGGGCACGTAACTCTGTCCGGTCTTGGTTTTGTCATTGTT
EX905562       <-- --TGAGAAGCAGGGCACGTAACTCTGTTCGGTCTTGGTTT-ATCATTGT-
EX904273       <-- ......................TCTGT-CGGTCTTGGTTT-GTCATTGCT
EY906042       <-- ..................................................
EX777623       --> TTGGAGAAGCAGGGCACGTAACTCTGTCCGGTCTTGGTTTTGTCATTGTT
EY902329       --> TTGGAGAAGCAGGGCACGTAACTCTGTTCGGTCTTAGTTTTGTCATTGTT
EX909257       --> TTGGAGAAGCAGGGCACGTAACTCTGTTCGGTCTTGGTTTTATCATTGTT
EX908204       --> TTGGAGAAGCAGGGCACGTAACTCTGTTCGGTCTTGGTTTTGTCATTGCT

               551    -    601
UN10079        --> GTATGGTGAAGAATCATTTAAAGGTGGTAAGCTAGAACCTCCATAAGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX773809       <-- GTTTGGTGAAGAATCATTTAAAGGTGGTAAGCTAGAACCTCCATAAGAAC
EX905562       <-- GTATGGTGAAGAATCATTTAAAGGTGGTAAGCTAGAACCTCCATAAGAAC
EX904273       <-- GTATGGTGAAGAATCATTTAAAGGTGGTAAGCTAGAAC-TCCATAAGAAC
EY906042       <-- ..................................................
EX777623       --> GTTTGGTGAAGAATCATTTAAAGGTGGTAAGCTAGAACCTCCATAAGAAC
EY902329       --> GTATGGTGAAGAATCATTTAAAGGTGGTAAGCTAGAACCTCCATAAGAAC
EX909257       --> GTATGGTGAAGAATCATTTAAAGGTGGTAAGCTAGAACCTCCATAAGAAC
EX908204       --> GTATGGTGAAGAATCATTTAAAGGTGGTAAGCTAGAACCTCCATAAGAAC

               601    -    651
UN10079        --> CAATTTGGATTAGAGTCGAAATAGGGATCTTCTTGCCTCCAGCTGTTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX773809       <-- CAATTTGGATTAGAGTCGAAATAGGGATCTTCTTGCCTCCAGCTGTTTTA  Raphanus raphanistrum subsp. landra
EX905562       <-- CAATTTGGATTAGAGTCGAAATAGGGATCTTCTTGCCTCCAGCTGTTTTA  Raphanus sativus cv Rat-Tail Radish #3870
EX904273       <-- CAATTTGGATTAAAGTTGAAATAGGGATCTTCTTGCCTCCAGCAGTTTTG  Raphanus sativus cv Rat-Tail Radish #3870
EY906042       <-- ............................CTTCTTGCCTCCAGCAGTTTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX777623       --> CAATTTGGATTAGAGTCGAAATAGGGATCTTCTTGCCTCCAGCTGTTTTA  Raphanus raphanistrum subsp. landra
EY902329       --> CAATTTGGATCAGAGTCGAAATAGGGATCTTCTTGCCTCCAGCAGTTTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX909257       --> CAATTTGGATTAGAGTCGAAATAGGGATCTTCTTGCCTCCAGCTGTTTTA  Raphanus sativus cv Rat-Tail Radish #3870
EX908204       --> CAATTTGGATTAAAGTTGAAATAGGGATCTTCTTGCCTCCAGCAGTTTTG  Raphanus sativus cv Rat-Tail Radish #3870

               651    -    701
UN10079        --> TGAAACACTCTGCATATCACCCATTCATTCTTGGCGGTTTTGGGCAAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX773809       <-- TGAAACACTCTGCATATCACCCATTCATTCTTGGCGGTTTTGGGCAAGTT
EX905562       <-- TGAAACACTCTGCATATCACCCATTCATTCTTGGCGGTTTTGGGCAAGTT
EX904273       <-- TGAAACACTCTGCATATCACCCATTCATTCTTGGCGGTTTTGGGCAAGTT
EY906042       <-- TGAAACACTCTGCATATCACCCATTCATTCTTGGCGGTTTTGGGCATGTT
EX777623       --> TGAAACACTCTGCATATCACCCATTCATTCTTGGCGGTTTTGGGCAAGTT
EY902329       --> TGAAACACTCTGCATATCACCCATTCATTCTTGGCGGTTTTGGGCATGTT
EX909257       --> TGAAACACTCTGCATATCACCCATTCATTCTTGGCGGTTTTGGGCAAGTT
EX908204       --> TGAAACACTCTGCATATCACCCATTCATTCTTGGCGGTTTTGGGCAAGTT

               701    -    751
UN10079        --> GTGAGCAGATAGCTTCCCATCAAGCCTATACTCATGCATCACCCAATTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX773809       <-- GTGAGCAGATAGCTTCCCATCAAGCCTATACTCATGCATCACCCAATTTG  Raphanus raphanistrum subsp. landra
EX905562       <-- GTGAGCAGATAGCTTCCCATCAAGCCTATACTCATGCATCACCCAATTTG  Raphanus sativus cv Rat-Tail Radish #3870
EX904273       <-- GTGAGCAGAGAGTTTCCCATCAAGCCTATACTCATGCATCACCCAATTTG  Raphanus sativus cv Rat-Tail Radish #3870
EY906042       <-- GTGAGCAGAGAGCTTCCCATCAAGCCTATACTCATGCATCACCCAATTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX777623       --> GTGAGCAGATAGCTTCCCATCAAGCCTATACTCATGCATCACCCAATTTG  Raphanus raphanistrum subsp. landra
EY902329       --> GTGAGCAGAGAGCTTCCCATCAAGCCTATACTCATGCATCACCCAATTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX909257       --> GTGAGCAGATAGCTTCCCATCAAGCCTATACTCATGCATCACCCAATTTG  Raphanus sativus cv Rat-Tail Radish #3870
EX908204       --> GTGAGCAGAGAGTTTCCCATCAAGCCTATACTCATGCATCACCCAATTTG  Raphanus sativus cv Rat-Tail Radish #3870

               751    -    801
UN10079        --> TTTTCTGCCCTTTTGGAGCTCTTCCTCTGTAGAAAACAAGTGTTTTCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX773809       <-- TTTTCTGCCCTTTTGGAGCTCTTCCTCTGTAGAAAACAAGTGTTTTCTTC
EX905562       <-- TTTTCTGCCCTTTTGGAGCTCTTCCTCTGTAGAAAACAAGTGTTTTCTTC
EX904273       <-- TTTTCTGCCCTTTTGGAGCTCTTCCTCTGTAGAAAACAAGTGTTTTCTTC
EY906042       <-- TTTTCTGCCCTTTTGGAGCTCTTCCTCTGTAGAAAACAAGTGTTTTCTTC
EX777623       --> TTTTCTGCCCTTTTGGAGCTCTTCCTCTGTAGAAAACAAGTGTTTTCTTC
EY902329       --> TTTTCTGCCCTTTTGGAGCTCTTCCTCTGTAGAAAACAAGTGTTTT....
EX909257       --> TTTTCTGCCCTTTTGGAGCTCTTCCTCTGTAGAAAACAAGTGTTTTCTTC
EX908204       --> TTTTCTGCCCTTTTGGAGCTCTTCCTCTGTAGAAAACAAGTGTTTTCTTC

               801    -    851
UN10079        --> ATACCAACTAGTGATTTGCCTCTGAAGATCTCCTTATCCTTCCCTGTAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX773809       <-- ATACCAACTAGTGATTTGCCTCTGAAAATCTCCTTATCCTTCCCTGTAGC
EX905562       <-- ATACCAACTAGTGATTTGCCTCTGAAAATCTCCTTATCCTTCCCTGTAGC
EX904273       <-- ATACCAACTAGTGATTTGCCTCTGAAGATCTCCTTATCCTTCCCTGTAGC
EY906042       <-- ATACCAACTAGTGATTCGCCTCTGAAGATCTCCTTATCCTTCCCTGTAGC
EX777623       --> ATACCAACTAGTGATTT.................................
EY902329       --> ..................................................
EX909257       --> ATACCAACTAGTGATTTGCCTCT...........................
EX908204       --> ATACCAACTAGTGATTTGCCTCTGAAGA......................

               851    -    901
UN10079        --> CTTCCAGTAACCGGCTTGAGTTGCCCGGTTAGTCCTCAAACCGGTTGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX773809       <-- CTTCCAATAACCGGCTTGAGTTGCCCGGTTAGTCCTCAAACCGGTTGGAT
EX905562       <-- CTTCCAATAACTGGCTTGAGTTGCCCGGTTAGTCCTCAAACCGGTTGGAT
EX904273       <-- CTTCCAGTAACCGGCTTGAGTTGCCCGGTTGGTCCTCAAACCGGTTGGAT
EY906042       <-- CTTCCAGTAACCGGCTTGAGTTGCCCGGTTAGTCCTCAAACCGGTTGGAT
EX777623       --> ..................................................
EY902329       --> ..................................................
EX909257       --> ..................................................
EX908204       --> ..................................................

               901    -    951
UN10079        --> ACTTTCTATCCCTCACACAGAAGAAGTACCATTCTTTCTCACCCATTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX773809       <-- ACTTTCTATCCCTCACACAGAAGAAGTACCATTCTTTCTCACCCATTTTT
EX905562       <-- ACTTTCTATCCCTCACACAGAAGAAGTACCATTCTTTCTCACCCATTTTT
EX904273       <-- ACTTTCTATCCCTCACACAGAAGAAGTACCATTCTTTCTCACCCATTTT-
EY906042       <-- ACTTTCTATCCCTCACACAGAAGAAGTACCATTCTTTCTCACCCATTTTT
EX777623       --> ..................................................
EY902329       --> ..................................................
EX909257       --> ..................................................
EX908204       --> ..................................................

               951    -   1001
UN10079        --> GCTTTATATGGCAACTCCCATGGCTCAGCTTTGTTCAAATCCACTTCACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX773809       <-- GCTTTATATGGCAACTCCCAAGGCTCAGCTTTGTTCAAATCCACTTCACC
EX905562       <-- GCTTTATATGGCAACTCCCAAGGCTCAGCTTTGTTCAAATCCACTTCACC
EX904273       <-- GCTTTATATGGCAACTCCCATGGCTCAGCTTTGTTCAAATCCACTTCACC
EY906042       <-- GCTTTATATGGCAACTCCCATGGCTCAGCTTTGTTCAAATCCACTTCACC
EX777623       --> ..................................................
EY902329       --> ..................................................
EX909257       --> ..................................................
EX908204       --> ..................................................

               1001   -   1051
UN10079        --> AATAGCTTTAGCTGAGAAATCAATGTTGAGAACCTTGTTGTGAAGATAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX773809       <-- AATAGCTTTAGCTGAGAAATCAATGTTGAGAACCTTGTTGTGAAGATAGT
EX905562       <-- AATAGCTTTAGCTGAGAAATCAATGTTGAGAACCTTGTTGTGAAGATAGT
EX904273       <-- AATAGCTTTAGCTGAGAAATCAATGTTGAGAACCTTGTTGTGAAGATAGT
EY906042       <-- AATAGCTTTAGATGAGAAATCAATGTTGAGAACCTTGTTGTGAAGATAGT
EX777623       --> ..................................................
EY902329       --> ..................................................
EX909257       --> ..................................................
EX908204       --> ..................................................

               1051   -   1101
UN10079        --> GGGTGATGAGTTCTTCGTCTGTTGGATGAAACCTAAACCCAGGAGGCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX773809       <-- GGGTGATGAGTTCTTCGTCTGTTGGATGAAACCTAAACCCAGGAGGCAAA
EX905562       <-- GGGTGATGAGTTCTTCGTCTGTTGGATGAAACCTAAACCCAGGAGGCAAA
EX904273       <-- GGGTGATGAGTTCTTCGTCTGTTGGATGAAACCTAAACCCAGGAGGCAAA
EY906042       <-- GGGTGATGAGTTCTTCGTCTGTTGGATGAAACCTAAACCCAGGAGGCAAA
EX777623       --> ..................................................
EY902329       --> ..................................................
EX909257       --> ..................................................
EX908204       --> ..................................................

               1101   -   1151
UN10079        --> ACCATCTGCTCATCATCTTCCTTGTGAAACCCACCAAAAGTTTCCATCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX773809       <-- ACCATCTG..........................................
EX905562       <-- ACCATCTGCTCATCATCTTCCTTGTGAAACCCACCAAAAGTTTCCATATT
EX904273       <-- ACCATCTGCTCATCATCTTCCTTGTGAAACCCACCAAAAGTTTCCATCTT
EY906042       <-- ACCATATGCTCATCATCTTCCTTGTGAAACCCACCAAAAGTTTCCATCTT
EX777623       --> ..................................................
EY902329       --> ..................................................
EX909257       --> ..................................................
EX908204       --> ..................................................

               1151   -   1201
UN10079        --> TTTTTT-ATCACCCAAGCAACCTTTAAACCCTAGAAGAAAAGCAAATATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX773809       <-- ..................................................
EX905562       <-- TTTTTT-ATCACCCAAGAAACCTT-AAACCCTAGAAGAAAAGCAAATATC
EX904273       <-- TTTTT--ATCACCCAAGCAATCTTTAAACCCTAGAAGAAAAGCAAATATC
EY906042       <-- TTTTTTTATCACCCAAGCAACCTTTAAACCCTAGAAGAAAAGCAAATATC
EX777623       --> ..................................................
EY902329       --> ..................................................
EX909257       --> ..................................................
EX908204       --> ..................................................

               1201   -   1251
UN10079        --> TGATCCAGCAACAAAAACAAAATCTTATTTGATAGAAAAGGTGTGTTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX773809       <-- ..................................................
EX905562       <-- TGATCCAGCAACAAAAACAAAATCTTATTTGATAGAAAAaa.........
EX904273       <-- TGATCCAGCAACAAAAACAAAATCTTATTTGATAGAAAAGGTGTGTTTCT
EY906042       <-- TGATCCAGCAACAAAAACAAAATCTTATTTGATAGAAA-GGTGTGTTTCT
EX777623       --> ..................................................
EY902329       --> ..................................................
EX909257       --> ..................................................
EX908204       --> ..................................................

               1251   -   1301
UN10079        --> CAAAAGTTTTTCTATCTGATCTTGAATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX773809       <-- .............................
EX905562       <-- .............................
EX904273       <-- CAAAAGTTTTTCTATCTGATCTTGAATCC
EY906042       <-- CAAAAGTTTTTCTATCTGATCTTcc....
EX777623       --> .............................
EY902329       --> .............................
EX909257       --> .............................
EX908204       --> .............................