Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN10083

               -3     -     47
UN10083        --> ....GAGGAACTCTCTTAGGGGTGGGTAAGTCATGGGCGTCAAGTATTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532626       <-- ..................................................
EV531142       <-- ..................................................
EX888562       --> ..ggGAGGAACTCTCTTAGGGGTGGGTAAGTCATGGGCGTCAAGTATTGT
FD562306       --> gggtGAGGAACTCTCTTAGGGGTGGGTAAGTCATGGGCGTCAAGTATTGT
EV528711       --> ....gggaggaaCTCTTAGGGGTGGGTAAGTTATGGGCGTCAAGTATTGT
EV568193       --> ....gtgaggaaCTCTTAGGGGTGGGTAAGTCATTGGTGTCAAGTATTGT
EY899221       --> ....gggaggaaCTCTTAGGGGTGGGTAAGTTATGGGCGTCAAGTATTGT
EX750113       --> ...............TTAGGGGTGGGTAAGTTATGGGCGTCAAGTATTGT
EW717891       --> ...............ggAGGGGTGGGTAAGTCATGGGCGTCAAGTATTGT
EX772287       --> ...................GGGTGGGTAAGTCATGGGTGTCAAGTATTGT
EX772394       --> ...................GGGTGGGTAAGTCATGGGTGTCAAGTATTGT
EV569184       --> ..................................................
FD558143       --> ..................................................

               47     -     97
UN10083        --> CTACCGTTGCTTTTACTGTCATTGTTGATTGCTGAATGTGCCTCAAGGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532626       <-- ..................................................
EV531142       <-- ..................................................
EX888562       --> CTACCGTTGCTTTTACTGTCATTGTTGATTGCTGAATGTGCCTCAAGGCC
FD562306       --> CTACCGTTGCTTTTACTGTCATTGTTGATTGCTGAATGTGCCTCAAGGCC
EV528711       --> CTACCGTTGCTTTTACTGTCATTGTTGATTGCTGAATGTGCCTCAAGGCC
EV568193       --> CTACCGTTGCTTTTACTGTCATTGTTGATTGCTGAATGTGCCTCAAGGCC
EY899221       --> CTACCGTTGCTTTTACTGTCATTGTTGATTGCTGAATGTGCCTCAAGGCC
EX750113       --> CTACCGTTGCTTTTACTGTCATTGTTGATTGCTGAATGTGCCTCAAGGCC
EW717891       --> CTACCGTTGCTTTTACTGTCATTGTTGATTGCTGAATGTGCCTCAAGGCC
EX772287       --> CTACCGTTGCTTTTACTGTCATTGTTGATTGCTGAATGTGCCTCAAGGCC
EX772394       --> CTACCGTTGCTTTTACTGTCATTGTTGATTGCTGAATGTGCCTCAAGGCC
EV569184       --> ............................................AAGGCC
FD558143       --> ..................................................

               97     -    147
UN10083        --> ATTGTATACGCTCCCAAGTCTAGCAAAAGCTGGAACCAAGAAACCGCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532626       <-- ..................................................
EV531142       <-- ..................................................
EX888562       --> ATTGTATACGCTCCCAAGTCTAGCAAAAGCTGGAACCAAGAAACCGCTTC
FD562306       --> ATTGTATACGCTCCCAAGTCTAGCAAAAGCTGGAACCAAGAAACCGCTTC
EV528711       --> ATTGTATACGCTCCCAAGTCTAGCAAAAGCTGGAACCAAGAAACCGCTTC
EV568193       --> ATTGTATACGCTCCCAAGTCTATCAAAAGCTGGAACCAAGAAACCGCTTC
EY899221       --> ATTGTATACGCTCCCAAGTCTAGCAAAAGCTGGAACCAAGAAACCGCTTC
EX750113       --> ATTGTATACGCTCCCAAGTCTAGCAAAAGCTGGAACCAAGAAACCGCTTC
EW717891       --> ATTGTATACGCTCCCAAGTCTAGCAAAAGCTGGAACCAAGAAACCGCTTC
EX772287       --> ATTGTATACGCTCCCAAGTCTAGCAAAAGCTGGAACCAAGAAACCGCTTC
EX772394       --> ATTGTATACGCTCCCAAGTCTAGCAAAAGCTGGAACCAAGAAACCGCTTC
EV569184       --> ATTGTATACGCTCCCAAGTCTAGCAAAAGCTGGAACCAAGAAACCGCTTC
FD558143       --> ..................................................

               147    -    197
UN10083        --> AGACTTCTCGTCCGTTCAATGTTGCACACAGAGGAGCAAACGGCGAGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532626       <-- ..................................................
EV531142       <-- ..................................................
EX888562       --> AGACTTCTCGTCCGTTCAATGTTGCACACAGAGGAGCAAACGGCGAGTTC
FD562306       --> AGACTTCTCGTCCGTTCAATGTTGCACACAGAGGAGCAAACGGCGAGTTC
EV528711       --> AGACTTCTCGTCCGTTCAATGTTGCACACAGAGGAGCAAACGGCGAGTTC
EV568193       --> AGACTTCTCGTCCGTTCAATGTTGCACACAGAGGAGCAAACGGCGAGTTC
EY899221       --> AGACTTCTCGTCCGTTCAATGTTGCACACAGAGGAGCAAACGGCGAGTTC
EX750113       --> AGACTTCTCGTCCGTTCAATGTTGCACACAGAGGAGCAAACGGCGAGTTC
EW717891       --> AGGCTTCTCGTCCGTTCAATGTTGCCCACAGAGGAGCAAACGGCGAGTTC
EX772287       --> AGACTTCTCGTCCGTTCAATGTTGCACACAGAGGAGCAAACGGCGAGTTC
EX772394       --> AGACTTCTCGTCCGTTCAATGTTGCACACAGAGGAGCAAACGGCGAGTTC
EV569184       --> AGACTTCTCGTCCGTTCAATGTTGCACACAGAGGAGCAAACGGCGAGTTC
FD558143       --> ......................gGCACACAGAGGAGCAAACGGCGAGTTC

               197    -    247
UN10083        --> CCTGAAGAAACTGCTCCTGCATATATGAGGGCCATCGAGGAAGGTGCAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532626       <-- ..................................................
EV531142       <-- ..................................................
EX888562       --> CCTGAAGAAACTGCTCCTGCATATATGAGGGCCATCGAGGAAGGTGCAGA
FD562306       --> CCTGAAGAAACTGCTCCTGCATATATGAGGGCCATCGAGGAAGGTGCAGA
EV528711       --> CCTGAAGAAACTGCTCCTGCATATATGAGGGCCATCGAGGAAGGTGCAGA
EV568193       --> CCTGAAGAAACTGCTCCTGCATATATGAGGGCCATCGAGGAAGGTGCAGA
EY899221       --> CCTGAAGAAATTGCTCCTGCATATATGAGGGCCATCGAGGAAGGTGCAGA
EX750113       --> CCTGAAGAAACTGCTCCTGCATATATGAGGGCCATCGAGGAAGGTGCAGA
EW717891       --> CCTGAAGAAACTGCTCCTGCATATATGAGGGCCATCGAGGAAGGTGCAGA
EX772287       --> CCTGAAGAAACTGCTCCTGCATATATGAGGGCCATCGAGGAAGGTGCAGA
EX772394       --> CCTGAAGAAACTGCTCCTGCATATATGAGGGCCATCGAGGAAGGTGCAGA
EV569184       --> CCTGAAGAAACTGCTCCTGCATATATGAGGGCCATCGAGGAAGGTGCAGA
FD558143       --> CCTGAAGAAACTGCTCCTGCATATATGAGGGCCATCGAGGAAGGTGCAGA

               247    -    297
UN10083        --> TTTCATAGAATCTGATATTCTATCTACGAAAGACGGTGTTCTTATATGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532626       <-- ..................................................
EV531142       <-- ..................................................
EX888562       --> TTTCATAGAATCTGATATTCTATCTACGAAAGACGGTGTTCTTATATGCC
FD562306       --> TTTCATAGAATCTGATATTCTATCTACGAAAGACGGTGTTCTTATATGCC
EV528711       --> TTTCATAGAATCTGATATTCTATCTACGAAAGACGGTGTTCTTATATACC
EV568193       --> TTTCATAGAATCTGATATTCTATCTACGAAAGACGGTGTTCTTATATGCC
EY899221       --> TTTCATAGAATCTGATATTCTATCTACGAAAGACGGTGTTCTTATATGCC
EX750113       --> TTTCATAGAATCTGATATTCTATCTACGAAAGACGGTGTTCTTATATGCC
EW717891       --> TTTCATAGAATCTGATATTCTATCTACGAAAGACGGTGTTCTTATATGCC
EX772287       --> TTTCATAGAATCTGATATTCTATCTACGAAAGACGGTGTTCTTATATGCC
EX772394       --> TTTCATAGAATCTGATATTCTATCTACGAAAGACGGTGTTCTTATATGCC
EV569184       --> TTTCATAGAATCTGATATTCTATCTACGAAAGACGGTGTTCTTATATGCC
FD558143       --> TTTCATAGAATCTGATATTCTATCTACGAAAGACGGTGTTCTTATATGCC

               297    -    347
UN10083        --> ATCACGATGTGAATCTCGATGATACAACCGATGTTGCGGACCACAAGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532626       <-- ..................................................
EV531142       <-- ..................................................
EX888562       --> ATCACGATGTGAATCTCGATGATACAACCGATGTTGCGGACCACAAGGAG
FD562306       --> ATCACGATGTGAATCTCGATGATACAACCGATGTTGTGGACCACAAGGAG
EV528711       --> ATCACGATGTGAATCTCGATGATACAACCGATGTTGCGGACCACAAGGAG
EV568193       --> ATCACGATGTGAATCTCGATGATACAACCGATGTTGCGGACCACAAGGAG
EY899221       --> ATCACGATGTGAATCTCGATGATACAACCGATGTTGCGGACCACAAGGAG
EX750113       --> ATCACGATGTGAATCTCGATGATACAACCGATGTTGCGGACCACAAGGAG
EW717891       --> ATCACGATGTGAATCTCGATGATACAACCGATGTTGCGGACCACAAGGAG
EX772287       --> ATCACGATGTGAATCTCGATGATACAACCGATGTTGCGGACCACAAGGAG
EX772394       --> ATCACGATGTGAATCTCGATGATACAACCGATGTTGCGGACCACAAGGAG
EV569184       --> ATCACGATGTGAATCTCGATGATACAACCGATGTTGCGGACCACAAGGAG
FD558143       --> ATCACGATGTGAATCTCGATGATACAACCGATTTTGCGGACCACAAGGAG

               347    -    397
UN10083        --> TTTGCAGACCGTAAGAGAACTTATGAAGTCCAAGGGATGAACATGACCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532626       <-- ..................................................
EV531142       <-- ..................................................
EX888562       --> TTTGCAGACCGTAAGAGAACTTATGAAGTCCAAGGGATGAACATGACCGG
FD562306       --> TTTGCAGACCGTAAGAGAACTTATGAAGTCCAAGGGATGAACATGACCGG
EV528711       --> TTTGCAGACCGTAAGAGAACTTATGAAGTCCAAGGGATGAACATGACCGG
EV568193       --> TTTGCAGACCGTAAGAGAACTTATGAAGTCCAAGGGATGAACATGACCGG
EY899221       --> TTTGCAGACCGTAAGAGAACTTATGAAGTCCAAGGGATGAACATGACCGG
EX750113       --> TTTGCATACCGTAAGAGAACTTATGAAGTCCAAGGGATGAACATGACCGG
EW717891       --> TTTGCAGACCGTAAGAGAACTTATGAAGTCCAAGGGATGAACATGACCGG
EX772287       --> TTTGCAGACCGTAAGAGAACTTATGAAGTCCAAGGGATGAACATGACCGG
EX772394       --> TTTGCAGACCGTAAGAGAACTTATGAAGTCCAAGGGATGAACATGACCGG
EV569184       --> TTTGCAGACCGTAAGAGAACTTATGAAGTCCAAGGGATGAACATGACCGG
FD558143       --> TTTGCAGACCGTAAGAGAACTTATGAAGTCCAAGGGATGAACATGACCGG

               397    -    447
UN10083        --> CTTCTTTACTGTTGATTTTACTCTCGAGGAGCTGAAAACAATTGGAGCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532626       <-- ..................................................
EV531142       <-- ..................................................
EX888562       --> CTTCTTTACTGTTGATTTTACTCTCGAGGAGCTGAAAACAATTGGAGCTA
FD562306       --> CTTCTTTACTGTTGATTTTACTCTCGAGGAGCTGAAAACAATTGGAGCTA
EV528711       --> CTTCTTTACTGTTGATTTTACTCTCGAGGAGCTGAGAACACTTGGAGCTA
EV568193       --> CTTCTTTACTGTTGATTTTACTCTCGAGGAGCTGAAAACAATTGGAGCTA
EY899221       --> CTTCTTTACTGTTGATTTTACTCTCGAGGAGCTGAGAACACTTGGAGCTA
EX750113       --> CTTCTTTACTGTTGATTTTACTCTCGAGGAGCTGAGAACACTTGGAGCTA
EW717891       --> CTTCTTTACTGTTGATTTTACTCTCGAGGAACTGAAAACAATTGGAGCTA
EX772287       --> CTTCTTTACTGTTGATTTTACTCTCGAGGAGCTGAAAACAATTGGAGCTA
EX772394       --> CTTCTTTACTGTTGATTTTACTCTCGAGGAGCTGAAAACAATTGGAGCTA
EV569184       --> CTTCTTTACTGTTGATTTTACCCTCGAGGAGCTGAAAACAATTGGAGCTA
FD558143       --> CTTCTTTACTGTTGATTTTACTCTCGAGGAGCTGAAAATAATTGGAGCTA

               447    -    497
UN10083        --> AGCAGAGGTATCCTTTCAGGGATCAACAGTACAATGGGAAGTTTCCAATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532626       <-- ................CAGGGATCAACAGTACAATGGGAAGTTTCCAATT  Raphanus raphanistrum subsp. maritimus
EV531142       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX888562       --> AGCAGAGGTATCCTTTCAGGGATCAACAGTACAATGGGAAGTTTCCAATT  Raphanus sativus var. oleiformis
FD562306       --> AGCAGAGGTATCCTTTCAGGGATCAACAGTACAATGGGAAGTTTCCAATT  Raphanus sativus var. oleiformis
EV528711       --> AGCAGAGGTATCCTTTCAGGGATCAACAGTACAATGGGAAGTTTCCAATT  Raphanus raphanistrum subsp. maritimus
EV568193       --> AGCAGAGGTATCCTTTCAGGGATCAACAGTACAATGGTAAGTTCCCAATT  Raphanus raphanistrum subsp. landra
EY899221       --> AGCAGAGGTATCCTTTCAGGGATCAACAGTACAATGGGAAGTTTCCAATT  Raphanus raphanistrum subsp. maritimus
EX750113       --> AGCAGAGGTATCCTTTCAGGGATCAACAGTACAATGGGAAGTTTCCAATT  Raphanus raphanistrum subsp. maritimus
EW717891       --> AGCAGAGGTATCCTTTCAGGGATCAACAGTACAATGGGAAGTTTCCAATT  Raphanus sativus var. oleiformis
EX772287       --> AGCAGAGGTATCCTTTCAGGGATCAACAGTACAATGGTAAGTTCCCAATT  Raphanus raphanistrum subsp. landra
EX772394       --> AGCAGAGGTATCCTTTCAGGGATCAACAGTACAATGGTAAGTTCCCAATT  Raphanus raphanistrum subsp. landra
EV569184       --> AGCAGAGGTATCCTTTCAGGGATCAACAGTACAATGGTAAGTTCCCAATT  Raphanus raphanistrum subsp. landra
FD558143       --> AGCAGAGGTATCCTTTCAGGGATCAACAGTACAATGGTAAGTTCCCAATT  Raphanus raphanistrum subsp. landra

               497    -    547
UN10083        --> ATTACTTTGGACGAGTATATAGCAATAGCACTGGATGCACCTAGAGTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532626       <-- ATTACTTTGGACGAGTATATAGCAATAGCACTGGATGCACCTAGAGTTGT  Raphanus raphanistrum subsp. maritimus
EV531142       <-- ............................................AGTTGT  Raphanus raphanistrum subsp. maritimus
EX888562       --> ATTACTTTGGACGAGTTTATAGCAATAGCACTGGATGCACCTAGAGTTGT  Raphanus sativus var. oleiformis
FD562306       --> ATTACTTTGGACGAGTTTATAGCAATAGCACTGGATGCACCTAGAGTTGT  Raphanus sativus var. oleiformis
EV528711       --> ATTACTTTGGACGAGTATATAGCAATAGCACTGGATGCACCTAGAGTTGT  Raphanus raphanistrum subsp. maritimus
EV568193       --> ATTACTTTTGATGAGTATATAGCAATAGCACTGGATGCACCTAGAGTTGT  Raphanus raphanistrum subsp. landra
EY899221       --> ATTACTTTGGACGAGTATATAGCAATAGCACTGGATGCACCTAGAGTTGT  Raphanus raphanistrum subsp. maritimus
EX750113       --> ATTACTTTGGACGAGTATATAGCAATAGCACTGGATGCACCTAGAGTTGT  Raphanus raphanistrum subsp. maritimus
EW717891       --> ATTACTTTGGACGAGTTTATAGCAATAGCACTGGATGCACCTAGAGTTGT  Raphanus sativus var. oleiformis
EX772287       --> ATTACTTTTGATGAGTATATAGCAATAGCACTGGATGCACCTAGAGTTGT  Raphanus raphanistrum subsp. landra
EX772394       --> ATTACTTTTGATGAGTATATAGCAATAGCACTGGATGCACCTAGAGTTGT  Raphanus raphanistrum subsp. landra
EV569184       --> ATTACTTTTGATGAGTATATAGCAATAGCACTGGATGCACCTAGAGTTGT  Raphanus raphanistrum subsp. landra
FD558143       --> ATTACTTTTGATGAGTATATAGCAATAGCACTGGATGCACCTAGAGTTGT  Raphanus raphanistrum subsp. landra

               547    -    597
UN10083        --> TGGGATATATCCAGAGATCAAGAACCCTGTTTTCATCAATCAGCAAGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532626       <-- TGGGATATATCCAGAGATCAAGAACCCTGTTTTCATCAATCAGCAAGTGA
EV531142       <-- TGGGATATATCCAGAGATCAAGAACCCTGTTTTCATCAATCAGCAAGTGA
EX888562       --> TGGGGTATATCCAGAGATCAAGAACCCTGTTTTCATCAATCAGCAAGTGA
FD562306       --> TGGGATATATCCAGAGATCAAGAACCCTGTTTTCATCAATCAGCAAGTGA
EV528711       --> TGGGATATATCCAGAGATCAAGAACCCTGTTTTCATCAATCAGCAAGTGA
EV568193       --> TGGGATATATCCAGAGATCAAGAACCCTGTTTTCATCAATCAGCAAGTGA
EY899221       --> TGGGATATATCCAGAGATCAAGAACCCTGTTTTCATCAATCAGCAAGTGA
EX750113       --> TGGGATATATCCAGAGATCAAGAACCCTGTTTTCATCAATCAGCAAGTGA
EW717891       --> TGGGATATATCCAGAGATCAAGAACCCTGTTTTCATCAATCAGCAAGTGA
EX772287       --> TGGGATATATCCAGAGATCAAGAACCCTGTTTTCATCAATCAGCAAGTGA
EX772394       --> TGGGATATATCCAGAGATCAAGAACCCTGTTTTCATCAATCAGCAAGTGA
EV569184       --> TGGGATATATCCAGAGATCAAGAACCCTGTTTTCATCAATCAGCAAGTGA
FD558143       --> TGGGATATATCCAGAGATCAAGAACCCTGTTTTCATCAATCAGCAAGTGA

               597    -    647
UN10083        --> AATGGGCTGATGGTAAAAAGTTCGAGGATAAGATTGTTGCAACTTTGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532626       <-- AATGGGCTGATGGTAAAAAGTTCGAGGATAAGATTGTTGCAACTTTGAAG
EV531142       <-- AATGGGCTGGTGGTAAAAAGTTCGAGGATAAGATTGTTGCAACTTTGAAG
EX888562       --> AATGGGCTGATGGTAAAAAGTTCGAGGATAAGATTGTTGCAACTTTGAAG
FD562306       --> AATGGGCTGATGGTAAAAAGTTCGAGGATAAGATTGTTGCAACTTTGAAG
EV528711       --> AATGGGCTGATGGTAAAAAGTTCGAGGATAAGATTGTTGCAACTTTGAAG
EV568193       --> AATGGGCTGATGGTAAAAAGTTCGAGGATAAGATTGTTGCAACTTTGAAG
EY899221       --> AATGGGCTGATGGTAAAAAGTTCGAGGATAAGATTGTTGCAACTTTGAAG
EX750113       --> AATGGGCTGATGGTAAAAAGTTCGAGGATAAGATTGTTGCAACTTTGAAG
EW717891       --> AATGGGCTGATGGTAAAAAGTTCGAGGATAAGATTGTTGCAACTTTGAAG
EX772287       --> AATGGGCTGATGGTAAAAAGTTCGAGGATAAGATTGTTGCAACTTTGAAG
EX772394       --> AATGGGCTGATGGTAAAAAGTTCGAGGATAAGATTGTTGCAACTTTGAAG
EV569184       --> AATGGGCTGATGGTAAAAAGTTCGAGGATAAGATTGTTGCAACTTTGAAG
FD558143       --> AATGGGCTGATGGTAAAAAGTTCGAGGATAAGATTGTTGCAACTTTGAAG

               647    -    697
UN10083        --> AAATATGGATACAAAG-CTCATATATGTCTCAAGATTGGCTAAAGCAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532626       <-- AAATATGGATACAAAGGCTCATATATGTCTCGAGATTGGCTGAAGCAGCC  Raphanus raphanistrum subsp. maritimus
EV531142       <-- AAATATGGATACAAAGGCTCATATATGTCTCGAGATTGGCTGAAGCAGCC  Raphanus raphanistrum subsp. maritimus
EX888562       --> AAATATGGATACAAAGGCTCATATATGTCTCAAGATTGGCTGAAACAGCC  Raphanus sativus var. oleiformis
FD562306       --> AAATATGGATACAAAG-CTCATATATGTCTCAAGATTGGCTGAAACAGCC  Raphanus sativus var. oleiformis
EV528711       --> AAATATGGATACAAAG-CTCATATATGTCTCGAGATTGGCTGAAGCAGCC  Raphanus raphanistrum subsp. maritimus
EV568193       --> AAATATGGATACAAAG-CTCATATATGTCTCAAGATTGGCTAAAGCAGCC  Raphanus raphanistrum subsp. landra
EY899221       --> AAATATGGATACAAAG-CTCATATATGTCTCGAGATTGGCTGAAGCAGCC  Raphanus raphanistrum subsp. maritimus
EX750113       --> AAATATGGATACAAAGGCTCATATATGTCTCGAGATTGGCT.........  Raphanus raphanistrum subsp. maritimus
EW717891       --> AAATATGGATACAAAG-CTCATATATGTCTCAAGATTGGCTGAAACAGCC  Raphanus sativus var. oleiformis
EX772287       --> AAATATGGATACAAAG-CTCATATATGTCTCAAGATTGGCTAATGCAGCC  Raphanus raphanistrum subsp. landra
EX772394       --> AAATATGGATACAAAG-CTCATATATGTCTCA-GATTGGCTAATGCAGCC  Raphanus raphanistrum subsp. landra
EV569184       --> AAATATGGATACAAAGGCTCATATATATCTCAAGATTGGCTAAAGCAGCC  Raphanus raphanistrum subsp. landra
FD558143       --> AAATATGGATACAAAGGCTCATATATGTCTCAAGATTGGCTAAAGCAGCC  Raphanus raphanistrum subsp. landra

               697    -    747
UN10083        --> AATATTTATCCAGTCTTTTGCTGCAACTTCGCTAGTTTACATTTCAAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532626       <-- AATATTTATCCAGTCTTTTGCTGCAACTTCGCTAGTTTACATTTCAAACA  Raphanus raphanistrum subsp. maritimus
EV531142       <-- AATATTTATCCAGTCTTTTGCTGCAACTTCGCTAGTTTACATTTCAAACA  Raphanus raphanistrum subsp. maritimus
EX888562       --> AATATTCATTCAGTCTTT-GCTGCA-CTTCGCTAGTTTACATTTCAAACA  Raphanus sativus var. oleiformis
FD562306       --> A-TATTCATTCAGTCTTTTGCTGCA-CTTCGCTAGTTTACATTTCAAACA  Raphanus sativus var. oleiformis
EV528711       --> AATATTTATCCAGTCTTTTGCTGCAACTTCGCTAGTTTACATTTCAAACA  Raphanus raphanistrum subsp. maritimus
EV568193       --> AATATTTATCCAGTCTTTTGCTGCAACTTCGCTAGTTCACATTTCAAACA  Raphanus raphanistrum subsp. landra
EY899221       --> AATATT-ATCCAGTC...................................  Raphanus raphanistrum subsp. maritimus
EX750113       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW717891       --> AATATTCATTCAGTCTTT-GCTGCA-CTTCGCTAGTTTACATTTCAAACA  Raphanus sativus var. oleiformis
EX772287       --> AATATTTATCCAGTCTTT-GCTGCA-CTTCGCTAGTTCACATTTCAA-CA  Raphanus raphanistrum subsp. landra
EX772394       --> A-TATTTATC........................................  Raphanus raphanistrum subsp. landra
EV569184       --> AATATTTATCCAGTCTTTTGCTGCAACTTCGCTAGTTCACATTTCAAACA  Raphanus raphanistrum subsp. landra
FD558143       --> AATATTTATCCAGTCTTTTGCTGCAACTTCGCTAGTTCACATTTCAAACA  Raphanus raphanistrum subsp. landra

               747    -    797
UN10083        --> TGACAGACTCACCAAAAGTGTTCTTGATCGACGATGTCACTATCTTAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532626       <-- TGACAGACTCACCAAAAGTGTTCTTGATCGACGATGTCACTATTTTAACC  Raphanus raphanistrum subsp. maritimus
EV531142       <-- TGACAGACTCACCAAAAGTGTTCTTGATCGACGATGTCACTATCTTAACC  Raphanus raphanistrum subsp. maritimus
EX888562       --> TGACAGACTCAC-AAAAGTGT-C-TGATCGACGATGTCACTATCTaccga  Raphanus sativus var. oleiformis
FD562306       --> TGACAGACTCACCAAA-GTGTTCTTGATCGACGATGTC............  Raphanus sativus var. oleiformis
EV528711       --> TGACAGACTCACCAAAAGTGTTCTTGATCGACGATGTCACTATCTTAACC  Raphanus raphanistrum subsp. maritimus
EV568193       --> TGACAGACTCACCAAAAGTGTTCTTGATCGATGACGTCACCATCTTAACC  Raphanus raphanistrum subsp. landra
EY899221       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX750113       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW717891       --> TGACAGACTCAC-AAAAGTGTTCTTG........................  Raphanus sativus var. oleiformis
EX772287       --> TGACAGACTCACaaa...................................  Raphanus raphanistrum subsp. landra
EX772394       --> ..................................................  Raphanus raphanistrum subsp. landra
EV569184       --> TGACAGACTCACCAAAAGTGTTCTTGATCGATGATGTCACTATCTTAACC  Raphanus raphanistrum subsp. landra
FD558143       --> TGACAGACTCACCAAAAGTGTTCTTGATCGATGATGTCACTATCTTAACC  Raphanus raphanistrum subsp. landra

               797    -    847
UN10083        --> GAAGACACTAATAAGACATACGCTGAGATTACATCAGACGCATATTTAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532626       <-- GAAGACACTAATAAGACATACGCTGAGATTACATCAGACGCATATTTAGA
EV531142       <-- GAAGACACTAATAAGACATACGCTGAGATTACATCAGACGCATATTTAGA
EX888562       --> gacac.............................................
FD562306       --> ..................................................
EV528711       --> GA-GACACTAATA-GACATACGCTGAGATTACATCAGACGCATATTTAGA
EV568193       --> GA-GACACTAATA-GACATACGCTGAGATTACATCAGACGCATATTTAGA
EY899221       --> ..................................................
EX750113       --> ..................................................
EW717891       --> ..................................................
EX772287       --> ..................................................
EX772394       --> ..................................................
EV569184       --> GAAGACACTAATAAGACATACGCTGAGATTACATCAGACGCATATTTAGA
FD558143       --> GAAGACACTAATAAGACATACGCTGAGATTACATCAGACGCATATTTAGA

               847    -    897
UN10083        --> TTACATTAAACCATATGTGGTTGGGATTGGTCCATGGAAAGACACTATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532626       <-- TTACATTAAACCATATGTGGTTGGGATTGGTCCATGGAAAGACACTATTG
EV531142       <-- TTACATTAAACCATATGTGGTTGGGATTGGTCCATGGAAAGACACTATTG
EX888562       --> ..................................................
FD562306       --> ..................................................
EV528711       --> T.................................................
EV568193       --> Tacataaacatat.....................................
EY899221       --> ..................................................
EX750113       --> ..................................................
EW717891       --> ..................................................
EX772287       --> ..................................................
EX772394       --> ..................................................
EV569184       --> TTACA.............................................
FD558143       --> TTACATT...........................................

               897    -    947
UN10083        --> TTCCTGTTAGCAATAACCGTCTGACTACACCAACGGATCTGGTTGCAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532626       <-- TTCCTGTTAGCAATAACCGTCTGACTACACCAACGGATCTGGTTGCAAGA
EV531142       <-- TTCCTGTTAGCAATAACCGTCTGACTACACCAACGGATCTGGTTGCAAGA
EX888562       --> ..................................................
FD562306       --> ..................................................
EV528711       --> ..................................................
EV568193       --> ..................................................
EY899221       --> ..................................................
EX750113       --> ..................................................
EW717891       --> ..................................................
EX772287       --> ..................................................
EX772394       --> ..................................................
EV569184       --> ..................................................
FD558143       --> ..................................................

               947    -    997
UN10083        --> GCACATTCACGTAACCTTCAGGTGCATCCATACACATACCGTAACGAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532626       <-- GCACATTCACGTAACCTTCAGGTGCATCCATACACATACCGTAACGAGAA
EV531142       <-- GCACATTCACGTAACCTTCAGGTGCATCCATACACATACCGTAACGAGAA
EX888562       --> ..................................................
FD562306       --> ..................................................
EV528711       --> ..................................................
EV568193       --> ..................................................
EY899221       --> ..................................................
EX750113       --> ..................................................
EW717891       --> ..................................................
EX772287       --> ..................................................
EX772394       --> ..................................................
EV569184       --> ..................................................
FD558143       --> ..................................................

               997    -   1047
UN10083        --> CCAGTTTTTGCATTCCGGGTTTCATCAAGATGCGTATTTGGAGTATGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532626       <-- CCAGTTTTTGCATTCCGGGTTTCATCAAGATGCGTATTTGGAGTATGATT
EV531142       <-- CCAGTTTT-GCATTCCGGGTTTCATCAAGATGCGTATTTGGAGTATGATT
EX888562       --> ..................................................
FD562306       --> ..................................................
EV528711       --> ..................................................
EV568193       --> ..................................................
EY899221       --> ..................................................
EX750113       --> ..................................................
EW717891       --> ..................................................
EX772287       --> ..................................................
EX772394       --> ..................................................
EV569184       --> ..................................................
FD558143       --> ..................................................

               1047   -   1097
UN10083        --> ATTGGATCAACAAGATTGGTGTTGATGGTCTGTTCACTGACTTCACCGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532626       <-- ATTGGATCAACAAGATTGGTGTTGATGGTCTGTTCACTGACTTCACCGGA
EV531142       <-- ATTGGATCAACAAGATTGGTGTTGATGGTCTGTTCACTGACTTCACCGGA
EX888562       --> ..................................................
FD562306       --> ..................................................
EV528711       --> ..................................................
EV568193       --> ..................................................
EY899221       --> ..................................................
EX750113       --> ..................................................
EW717891       --> ..................................................
EX772287       --> ..................................................
EX772394       --> ..................................................
EV569184       --> ..................................................
FD558143       --> ..................................................

               1097   -   1147
UN10083        --> AGTTTTCACAATTTCCAGGAGTTGACTTTTCCTTTGCCTAAACTTCAGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532626       <-- AGTTTTCACAATTTCCAGGAGTTGACTTTTCCTTTGCCTAAACTTCAGTG
EV531142       <-- AGTCTTCACAATTTCCAGGAGTTGACTTCTCCTTTGCCTAAACTTCAGTG
EX888562       --> ..................................................
FD562306       --> ..................................................
EV528711       --> ..................................................
EV568193       --> ..................................................
EY899221       --> ..................................................
EX750113       --> ..................................................
EW717891       --> ..................................................
EX772287       --> ..................................................
EX772394       --> ..................................................
EV569184       --> ..................................................
FD558143       --> ..................................................

               1147   -   1197
UN10083        --> ATTATGCAATGGATTTTGGGCTGTTTTTCTTTTGCCTTCTTAAGCTAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532626       <-- ATTATGCAATGGATTTTGGGCTGTTTTTCTTTTGCCTTCTTAAGCTAGTT
EV531142       <-- ATTATGCAATGGATTCTGGGCTGTTTTTCTTTTGCCTTCTTAAGCTAGTT
EX888562       --> ..................................................
FD562306       --> ..................................................
EV528711       --> ..................................................
EV568193       --> ..................................................
EY899221       --> ..................................................
EX750113       --> ..................................................
EW717891       --> ..................................................
EX772287       --> ..................................................
EX772394       --> ..................................................
EV569184       --> ..................................................
FD558143       --> ..................................................

               1197   -   1247
UN10083        --> TAATCTCCTGTTAGTTATTTTTGTAGGAATCCTTTGAAACTTTTCAATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532626       <-- TAATCTCCTGTTAGTTATTTTTGTAGGAATCCTTTGAAACTTTTCAATTC
EV531142       <-- TAATCTCCTGTTAGTTATTTTTGTAGGAATCCTTTGAAACTTTTCAATTC
EX888562       --> ..................................................
FD562306       --> ..................................................
EV528711       --> ..................................................
EV568193       --> ..................................................
EY899221       --> ..................................................
EX750113       --> ..................................................
EW717891       --> ..................................................
EX772287       --> ..................................................
EX772394       --> ..................................................
EV569184       --> ..................................................
FD558143       --> ..................................................

               1247   -   1297
UN10083        --> TTTTCTCTTTAATAAAAAGAAGCAACTGCTCCTTTTATGTTTTTTTACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532626       <-- TTTTCTCTTTAATAAAAAGAAGCAACTGCTCCTTTTATGg..........
EV531142       <-- TCTTCTCTTTAATAAAAAGAAGCAACTGCTCCTTTTATGTTTTTTTACAA
EX888562       --> ..................................................
FD562306       --> ..................................................
EV528711       --> ..................................................
EV568193       --> ..................................................
EY899221       --> ..................................................
EX750113       --> ..................................................
EW717891       --> ..................................................
EX772287       --> ..................................................
EX772394       --> ..................................................
EV569184       --> ..................................................
FD558143       --> ..................................................

               1297   -   1347
UN10083        --> TGCCTTGAGAATGTATTTTTGTCTAGGCAGCAACTCAGTCTTAACTGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532626       <-- ..................................................
EV531142       <-- TGCCTTGAGAATGTATTTTTGTCTAGGCAGCAACTCAGTCTTAACTGGAA
EX888562       --> ..................................................
FD562306       --> ..................................................
EV528711       --> ..................................................
EV568193       --> ..................................................
EY899221       --> ..................................................
EX750113       --> ..................................................
EW717891       --> ..................................................
EX772287       --> ..................................................
EX772394       --> ..................................................
EV569184       --> ..................................................
FD558143       --> ..................................................

               1347   -   1397
UN10083        --> TAATTTTT
                   ~~~~~~~~
EV532626       <-- ........
EV531142       <-- TAATTTTT
EX888562       --> ........
FD562306       --> ........
EV528711       --> ........
EV568193       --> ........
EY899221       --> ........
EX750113       --> ........
EW717891       --> ........
EX772287       --> ........
EX772394       --> ........
EV569184       --> ........
FD558143       --> ........