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Alignment for radish unigene UN10088

               1      -     51
UN10088        --> GGGAGTATTGACGAAGGAAAAGAGAATAATCCCTTTTCCGCGTTTCCTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY893506       <-- ..................................................
FD960204       <-- ..................................................
FD573082       <-- ..................................................
EY894498       <-- ..................................................
EY936269       <-- ..................................................
FD556295       --> GGGAGTATTGACGAAGGAAAAGAGAATAATCCCTTTTCCGCGTTTCCTGA
FD557450       --> GGGAGTATTGACGAAGGAAAAGAGAATAATCCCTTTTCCGCGTTTCCTGA
EY940520       --> ....ggATTGACGAAGGAAAAGAGAATAATCCCTTTTCCGCGTTTCCTGA
FD568779       --> .aggtgATTGACGAAGGAAAAGAGAATAATCCCTTTTCCGCGTTTCCTGA
FD964086       --> ......gggGACGAAGGAAAAGAGAATAATCCCTTTTCCGCGTTTCCTGA
EY897100       --> ...........gGAAGGAAAAGAGAATAATCCCTTTTCCGCGTTTCCTGA
EY898437       --> ...........gGAAGGAAAAGAGAATAATCCCTTTTCCGCGTTTCCTGA
EY901273       --> ..................................................

               51     -    101
UN10088        --> CCAAAAGTTTCATAACTGAGATTTGTTCCAACTCCGATCGTAGGTTTCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY893506       <-- ..................................................
FD960204       <-- ..................................................
FD573082       <-- ..................................................
EY894498       <-- ..................................................
EY936269       <-- ..................................................
FD556295       --> CCAAAAGTTTCATAACTGAGATTTGTTCCAACTCCGATCGTAGGTTTCGC
FD557450       --> CCAAAAGTTTCATAACTGATATTTGTTCCAACTCCGATCGTAGGTTTCGC
EY940520       --> CCAAAAGTTTCATAACTGAGATTTGTTCCAACTCCGATCGTAGGTTTCGC
FD568779       --> CCAAAAGTTTCATAACTGAGATTTGTTCCAACTCCGATCGTAGGTTTCGC
FD964086       --> CCAAAAGTTTCATAACTGAGATTTGTTCCAACTCCGATCGTAGGTTTCGC
EY897100       --> CCAAAAGTTTCATAACTGAGATTTGTTCCAACTCCGATCGTAGGTTTCGC
EY898437       --> CCAAAAGTTTCATAACTGAGATTTGTTCCAACTCCGATCGTAGGTTTCGC
EY901273       --> ............ggACTGAGATTTGTTCCAACTCCGATCGTAGGTTTCGC

               101    -    151
UN10088        --> TGATTCGAGCTCGCGTCAAAATCCTATTCAAAGTTTCCGAGATTTCGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY893506       <-- ..................................................
FD960204       <-- ..................................................
FD573082       <-- ..................................................
EY894498       <-- ..................................................
EY936269       <-- ..................................................
FD556295       --> TGATTCGAGCTCGTGTCAAAATCCTATTCAAAGTTTCCGAGATTTCGATC
FD557450       --> TGATTCGAGCTCGCGTCAAAATCCTATTCAAAGTT-CCGAGATTTCGATC
EY940520       --> TGATTCGAGCTCGCGTCAAAATCCTATTCAAAGTTTCCGAGATTTCGATC
FD568779       --> TGATTCGAGCTCGCGTCAAAATCCTATTCAAAGTTTCCGAGATTTCGATC
FD964086       --> TGATTCGAGCTCGCGTCAAAATCCTATTCAAAGTTTCCGAGATTTCGATC
EY897100       --> TGATTCGAGCTCGCGTCAAAATCCTATTCAAAGTTTCCGAGATTTCGATC
EY898437       --> TGATTCGAGCTCGCGTCAAAATCCTATTCAAAGTTTCCGAGATTTCGATC
EY901273       --> TGATTCGAGCTCGCGTCAAAATCCTATTCAAAGTTTCCGAGATTTCGATC

               151    -    201
UN10088        --> ATGATGAATTCCATCTTCGGAAAGCGGAAAACTCCTGCAGAACTACTGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY893506       <-- ......................................AGAACTACTGCG  Raphanus raphanistrum subsp. maritimus
FD960204       <-- ...............................................GCG  Raphanus raphanistrum subsp. maritimus
FD573082       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY894498       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY936269       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD556295       --> ACGATGAATTCCATCTTCGGAAAGCGGAAAACTCCTGCAGAACTACTGCG  Raphanus raphanistrum subsp. landra
FD557450       --> ATGATGAATTCCATCTTCGGAAAGCGGAAAACTCCTACAGAACTACTGCG  Raphanus raphanistrum subsp. landra
EY940520       --> ATGATGAATTCCATCTTCGGAAAGCGGAAAACTCCTACAGAACTACTGCG  Raphanus sativus cv Early Scarlet Globe
FD568779       --> ATGATGAATTCCATCTTCGGAAAGCGGAAAACTCCTACAGAACTACTGCG  Raphanus sativus cv Early Scarlet Globe
FD964086       --> ATGATGAATTCCATCTTCGGAAAGCGGAAAACTCCTGCAGAACTACTGCG  Raphanus raphanistrum subsp. maritimus
EY897100       --> ATGATGAATTCCATCTTCGGAAAGCGGAAAACTCCTGCAGAACTACTGCG  Raphanus raphanistrum subsp. maritimus
EY898437       --> ATGATGAATTCCATCTTCGGAAAGCGGAAAACTCCTGCAGAACTACTGCG  Raphanus raphanistrum subsp. maritimus
EY901273       --> ATGATGAATTCCATCTTCGGAAAGCGGAAAACTCCTGCAGAACTACTGCG  Raphanus raphanistrum subsp. maritimus

               201    -    251
UN10088        --> GGAAAACAAGAGGATGCTCGATAAGTCAATCAGAGACATCGAGAGGGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY893506       <-- GGAAAACAAGAGGATGCTCGATAAGTCAATCAGAGACATCGAGAGGGAGA
FD960204       <-- GGAAAACAAGAGGATGCTCGATAAGTCAATCAGAGACATCGAGAGGGAGA
FD573082       <-- ..................................................
EY894498       <-- ..................................................
EY936269       <-- ..................................................
FD556295       --> GGAAAACAAGAGGATGCTCGATAAGTCAATCAGAGACATCGAGAGGGAGA
FD557450       --> GGAAAACAAGAGGATGCTCGATAAGTCAATCAGAGACATTGAGAGGGAGA
EY940520       --> GGAAAACAAGAGGATGCTCGATAAGTCAATCAGAGACATTGAGAGGGAGA
FD568779       --> GGAAAACAAGAGGATGCTCGATAAGTCAATCAGAGACATTGAGAGGGAGA
FD964086       --> GGAAAACAAGAGGATGCTCGATAAGTCAATCAGAGACATCGAGAGGGAGA
EY897100       --> GGAAAACAAGAGGATGCTCGATAAGTCAATCAGAGACATCGAGAGGGAGA
EY898437       --> GGAAAACAAGAGGATGCTCGATAAGTCAATCAGAGACATCGAGAGGGAGA
EY901273       --> GGAAAACAAGAGGATGCTCGATAAGTCAATCAGAGACATCGAGAGGGAGA

               251    -    301
UN10088        --> GACAAGGCCTTCAAACACAAGAGAAGAAACTTATTACCGAGATTAAGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY893506       <-- GACAAGGCCTTCAAACACAAGAGAAGAAACTTATTACCGAGATTAAGAAG
FD960204       <-- GACAAGGCCTTCAAACACAAGAGAAGAAACTTATTACCGAGATTAAGAAG
FD573082       <-- ...................................ACCGAGATTAAGAAG
EY894498       <-- ..................................................
EY936269       <-- ..................................................
FD556295       --> GACAAGGCCTTCAAACACAAGAGAAGAAACTTATTACCGAGATTAAGAAG
FD557450       --> GACAAGGCCTTCAAACACAAGAGAAGAAACTTATTACCGAGATTAAGAAG
EY940520       --> GACAAGGCCTTCAAACACAAGAGAAGAAACTTATTACCGAGATTAAGAAG
FD568779       --> GACGAGGCCTTCAAACACAAGAGAAGAAACTTATTACCGAGATTAAGAAG
FD964086       --> GACAAGGCCTTCAAACACAAGAGAAGAAACTTATTACCGAGATTAAGAAG
EY897100       --> GACAAGGCCTTCAAACACAAGAGAAGAAACTTATTACCGAGATTAAGAAG
EY898437       --> GACAAGGCCTTCAAACACAAGAGAAGAAACTTATTACCGAGATTAAGAAG
EY901273       --> GACAAGGCCTTCAAACACAAGAGAAGAAACTTATTACCGAGATTAAGAAG

               301    -    351
UN10088        --> ACCGCAAAGCAGGGCCAGATGGGAGCTGTGAAAGTGATGGCAAAGGACCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY893506       <-- ACCGCAAAGCAGGGCCAGATGGGAGCTGTGAAAGTGATGGCAAAGGACCT
FD960204       <-- ACCGCAAAGCAGGGCCAGATGGGAGCTGTGAAAGTGATGGCAAAGGACCT
FD573082       <-- ACCGCAAAGCAGGGCCAGATGGGAGCTGTGAAAGTGATGGCAAAGGACCT
EY894498       <-- ................AGATGGGAGCTGTGAAAGTGATGGTAAAGGACCT
EY936269       <-- ..................................................
FD556295       --> ACCGCAAAGCAGGGCCAGATGGGAGCTGTGAAAGTAATGGCAAAGGACCT
FD557450       --> ACCGCAAAGCAGGGCCAGATGGGAGCTGTGAAAGTGATGGCAAAGGACCT
EY940520       --> ACCGCAAAGCAGGGCCAGATGGGAGCTGTGAAAGTGATGGCAAAGGACCT
FD568779       --> ACCGCAAAGCAGGGCCAGATGGGAGCTGTGAAAGTGATGGCAAAGGACCT
FD964086       --> ACCGCAAAGCAGGGCCAGATGGGAGCTGTGAAAGTGATGGCAAAGGACCT
EY897100       --> ACCGCAAAGCAGGGCCAGATGGGAGCTGTGAAAGTGATGGCAAAGGACCT
EY898437       --> ACCGCAAAGCAGGGCCAGATGGGAGCTGTGAAAGTGATGGTAAAGGACCT
EY901273       --> ACCGCAAAGCAGGGCCAGATGGGAGCTGTGAAAGTGATGGCAAAGGACCT

               351    -    401
UN10088        --> TATCAGAACACGGCACCAGATTGAGAAGTTTTACAAGCTTAAATCCCAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY893506       <-- TATCAGAACACGGCACCAGATTGAGAAGTTTTACAAGCTTAAATCCCAGC
FD960204       <-- TATCAGAACACGGCACCAGATTGAGAAGTTTTACAAGCTTAAATCCCAGC
FD573082       <-- TATCAGAACACGGCACCAGATTGAGAAGTTTTACAAGCTTAAATCCCAGC
EY894498       <-- TATCAGAACACGGCACCAGATTGAGAAGTTTTACAAGCTTAAATCCCAGC
EY936269       <-- ..................................................
FD556295       --> CATCAGAACACGGCACCAGATTGAGAAGTTTTACAAGCTTAAATCCCAGC
FD557450       --> TATCAGAACACGGCACCAGATTGAGAAGTTTTACAAGCTTAAATCCCAGC
EY940520       --> TATCAGAACACGGCACCAGATTGAGAAGTTTTACAAGCTTAAATCCCAGC
FD568779       --> TATCAGAACACGGCACCAGATTGAGAAGTTTTACAAGCTTAAATCCCAGC
FD964086       --> TATCAGAACACGGCACCAGATTGAGAAGTTTTACAAGCTTAAATCCCAGC
EY897100       --> TATCAGAACACGGCACCAGATTGAGAAGTTTTACAAGCTTAAATCCCAGC
EY898437       --> TATCAGAACACGGCACCAGATTGAGAAGTTTTACAAGCTTAAATCCCAGC
EY901273       --> TATCAGAACACGGCACCAGATTGAGAAGTTTTACAAGCTTAAATCCCAGC

               401    -    451
UN10088        --> TCCAAGGTGTATCTCTCAGGATCCAGACTTTAAAATCAACACAAGCAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY893506       <-- TCCAAGGTGTATCTCTCAGGATCCAGACTTTAAAATCAACACAAGCAATG
FD960204       <-- TCCAAGGTGTATCTCTCAGGATCCAGACTTTAAAATCAACACAAGCAATG
FD573082       <-- TCCAAGGTGTATCTCTCAGGATCCAGACTTTAAAATCAACACAAGCAATG
EY894498       <-- TCCAAGGTGTATCTCTCAGGATCCAGACTTTAAAATCAACACAAGCAATG
EY936269       <-- ..................................................
FD556295       --> TCCAAGGTGTTTCTCTCAGGATCCAGACTTTAAAATCAACACAAGCAATG
FD557450       --> TCCAAGGTGTATCTCTCAGGATCCAGACTTTAAAATCAACACAAGCAATG
EY940520       --> TCCAAGGTGTATCTCTCAGGATCCAGACTTTAAAATCAACACAAGCAATG
FD568779       --> TCCAAGGTGTATCTCTCAGGATC...........................
FD964086       --> TCCAAGGTGTATCTCTCAGGATCCAGACTTTAAAATCAACACAAGCAATG
EY897100       --> TCCAAGGTGTATCTCTCAGGATCCAGACTTTAAAATCAACACAAGCAATG
EY898437       --> TCCAAGGTGTATCTCTCAGGATCCAGACTTTAAAATCAACACAAGCAATG
EY901273       --> TCCAAGGTGTATCTCTCAGGATCCAGACTTTAAAATCAACACAAGCAATG

               451    -    501
UN10088        --> GGAGAGGCAATGAAAGGCGTGACTAAAGCAATGGGGCAAATGAACAGACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY893506       <-- GGAGAGGCAATGAAAGGCGTGACTAAAGCAATGGGGCAAATGAACAGACA
FD960204       <-- GGAGAGGCAATGAAAGGCGTGACTAAAGCAATGGGGCAAATGAACAGACA
FD573082       <-- GGAGAGGCAATGAAAGGCGTGACTAAAGCAATGGGGCAAATGAACAGACA
EY894498       <-- GGAGAGGCAATGAAAGGCGTGACTAAAGCAATGGGGCAAATGAACAGACA
EY936269       <-- ..................................................
FD556295       --> GGAGAGGCAATGAAAGGTGTGACTAAAGCAATGGGTCAAATGAACAGGCA
FD557450       --> GGAGAGGCAATGAAAGGCGTGACTAAAGCAATGGGGCAAATGAACAGACA
EY940520       --> GGAGAGGCAATGAAAGGCGTGACTAAAGCAATGGGGCAAATGAACATACA
FD568779       --> ..................................................
FD964086       --> GGAGAGGCAATGAAAGGCGTGACTAAAGCAATGGGGCAAATGAACAGACA
EY897100       --> GGAGAGGCAATGAAAGGCGTGACTAAAGCAATGGGGCAAATGAACAGACA
EY898437       --> GGAGAGGCAATGAAAGGCGTGACTAAAGCAATGGGGCAAATGAACAGACA
EY901273       --> GGAGAGGCAATGAAAGGCGTGACTAAAGCAATGGGGCAAATGAACAGACA

               501    -    551
UN10088        --> GATGAATCTTCCATCTCTGCAGAAAATCATGCAAGAGTTTGAGAGGCAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY893506       <-- GATGAATCTTCCATCTCTGCAGAAAATCATGCAAGAGTTTGAGAGGCAGA
FD960204       <-- GATGAATCTTCCATTTCTGCGGAAAATCATGCAAGAGTTTGAGAGGCAGA
FD573082       <-- GATGAATCTTCCATCTCTGCAGAAAATCATGCAAGAGTTTGAGAGGCAGA
EY894498       <-- GATGAATCTTCCATCTCTGCGGAAAATCATGCAAGAGTTTGAGAGGCAGA
EY936269       <-- ........................AATCATGCAAGAGTTTGAGAGGCAGA
FD556295       --> GATGAATCTGCCTTCTCTGCAGAAAATCAT....................
FD557450       --> GATGAATCTTCCATCTCTGCAGAAAACCATGCAAGAGTTTGAGAGGCAGA
EY940520       --> GATGAATCTTCCATCTCTGCAGAAAATCATGCAAGAGTTTGAGAGGCAGA
FD568779       --> ..................................................
FD964086       --> GATGAATCTTCCATCTCTGCGGAAAATCATGCAAGAGTTTGAGAGGCAGA
EY897100       --> GATGAATCTTCCATCTCTGCAGAAAATCATGCAAGAGTTTGAGAGGCAGA
EY898437       --> GATGAATCTTCCATCTCTGCGGAAAATCATGCAAGAGTTTGAGAGGCAGA
EY901273       --> GATGAATCTTCCATCTCTGCAGAAAATCATGCAAGAGTTTGAGAGGCAGA

               551    -    601
UN10088        --> ACGAGAAAATGGAGATGGTCTCCGAGGTGATGGGAGATGCTATTGATGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY893506       <-- ACGAGAAAATGGAGATGGTCTCCGAGGTGATGGGAGATGCTATTGATGAT
FD960204       <-- ACGAGAAAATGGAGATGGTTTCCGAGGTGATGGGAGATGCTATTGATGAT
FD573082       <-- ACGAGAAAATGGAGATGGTTTCCGAGGTGATGGGAGATGCTATTGATGAT
EY894498       <-- ACGAGAAAATGGAGATGGTCTCCGAGGTGATGGGAGATGCTATTGATGAT
EY936269       <-- ACGAGAAAATGGAGATGGTCTCCGAGGTGATGGGAGATGCTATTGATGAT
FD556295       --> ..................................................
FD557450       --> ATGAGAAAATGGAGATGGTCTCCGAGGTGATGAGAGATGCTATTGATGAT
EY940520       --> ACGAGAAAATGGAGATGGTCTCCGAGGTGATGGGAGATGCTATTGATGAT
FD568779       --> ..................................................
FD964086       --> ACGAGAAAATGGAGATGGTCTCCGAGGTGATGGGAGATGCTATTGATGAT
EY897100       --> ACGAGAAAATGGAGATGGTCTCCGAGGTGATGGGAGATGCTATTGATGAT
EY898437       --> ACGAGAAAATGGAGATGGTCTCCGAGGTGATGGGAGATGCTATTGATGAT
EY901273       --> ACGAGAAAATGGAGATGGTCTCCGAGGTGATGGGAGATGCTATTGATGAT

               601    -    651
UN10088        --> GCCTTGGAAGGAGATGAGGAAGAGGAAGAGACTGAAGATCTTGTTAGCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY893506       <-- GCCTTGGAAGGAGATGAGGAAGAGGAAGAGACTGAAGATCTTGTTAGCCA
FD960204       <-- GCCTTGGAAGGAGATGAGGAAGAGGAAGAGACTGAAGATCTTGTTAGCCA
FD573082       <-- GCCTTGGAAGGAGATGAGGAAGAGGAAGAGACTGAAGATCTTGTTAGCCA
EY894498       <-- GCCTTGGAAGGAGATGAGGAAGAGGAAGAGACTGAAGATCTTGTTAGCCA
EY936269       <-- GCCTTGGAAGGAGATGAGGAAGAGGAAGAGACTGAAGATCTTGTTAGCCA
FD556295       --> ..................................................
FD557450       --> GCCTTGGAAGGAGATGAGGAAGAGGAAGAGACTGAAGATCTTGTTAGCCA
EY940520       --> GCCTTGGAAAGAGATGAGGAAGAGGAAGAGACTGAAGATCTTGTTAGCCA
FD568779       --> ..................................................
FD964086       --> GCCTTGGAAGGAGATGAGGAAGAGGAAGAGACTGAAGATCTTGTTAGCCA
EY897100       --> GCCTTGGAAGGAGATGAGGAA.............................
EY898437       --> GCCTTGGAAGGAGATGAGGAAGAGGAAGAGACTGAAGATCTTGTTAGCCA
EY901273       --> GCCTTGGAAGGAGATGAGGAAGAGGAAGAGACTGAAGATCTTGTTAGCCA

               651    -    701
UN10088        --> AGTCCTTGACGAGATCGGTATCGATATCAACCAAGAGCTGGTGAATGCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY893506       <-- AGTCCTTGACGAGATCGGTATCGATATCAACCAAGAGCTGGTGAATGCTC
FD960204       <-- AGTCCTTGACGAGATCGGTATCGATATCAACCAAGAGCTGGTGAATGCTC
FD573082       <-- AGTCCTTGACGAGATCGGTATCGATATCAACCAAGAGCTGGTGAATGCTC
EY894498       <-- AGTCCTCGACGAGATCGGTATCGATATCAACCAAGAGCTGGTGAATGCTC
EY936269       <-- AGTCCTTGACGAGATCGGTATCGATATCAACCAAGGGCTGGTGAATGCTC
FD556295       --> ..................................................
FD557450       --> AGTCCTTGACGAGATCGGTATCGATATCAACCAAGAGCTGGTGA-TGCTC
EY940520       --> AGTCCTTGACGAGATCGGTATCGATATCAACCAAGGGCTGGTGAATGCTC
FD568779       --> ..................................................
FD964086       --> AGTCCTTGACGAGATCGGTATCGATATCAACCAAGAGCTGGTGA-TGCTC
EY897100       --> ..................................................
EY898437       --> AGTCCTCGACGAGATCGGTATCGATATCAACCAAGAGCTGGTGAATGCTC
EY901273       --> AGTCCTTGACGAGATCGGTATCGATATCAACCAAGAGCTGGTGAATGCTC

               701    -    751
UN10088        --> CATC-TGGTGCGGTGGCTGCACCAGCAGCAAAGAACAAGGTGGTGCAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY893506       <-- CATC-TGGTGCGGTGGCTACACCAGCAGCAAAGAACAAGGTGGTGCAAGC
FD960204       <-- CATC-TGGTGCGGTGGCTGCACCAGCAGCAAATAACAAGGTGGTGCAAGC
FD573082       <-- CATC-TGGTGCGGTGGCTGCACCAGCAGCAAAGAACAAGGTGGTGCAAGC
EY894498       <-- CATC-TGGTGCGGTGGCTGCACCAGCAGCAAAGAACAAGGTGGTGCAAGC
EY936269       <-- CATC-TGGTGCGGTGGCTGCACCAGCAGCAAAGAACAAGGTGGTGCAAGC
FD556295       --> ..................................................
FD557450       --> -ATC-TGGTGCGGTGGCTGCACCAGCAGCAAAGAACAAG-TGGTGCAAGC
EY940520       --> CAT...............................................
FD568779       --> ..................................................
FD964086       --> -ATCTTGGTGCGGTGGCTGCACCAGCAGC.....................
EY897100       --> ..................................................
EY898437       --> CATC-TGGTGCGGTGGCTGCACCAGCAGCAAAGAACAAG-TGGTGCAAGC
EY901273       --> CATC-TGGTGCGGTGGCTGCACCA..........................

               751    -    801
UN10088        --> TGAGGCGGCCGGAGCTGAGGACGGTGGGGGAATTGATAGTGATCTTCAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY893506       <-- TGAGGCGGCCGGAGCTGAGGACGGTGGGGGAATTGATAGTGATCTTCAGG
FD960204       <-- TGAGGCGGCCGGAGCTGAGGACGGTGGGGGAATTGATAGTGATCTTCAGG
FD573082       <-- TGAGGCGGCCGGAGCTGAGGACGGTGGGGGAATTGATAGTGATCTTCAGG
EY894498       <-- TGAGGCGGCCGGAGCTGAGGACGGTGGGGGAATTGATAGTGATCTTCAGG
EY936269       <-- TGAGGCGGCCGGAGCTGAGGACGGTGGGGGAATTGATAGTGATCTTCAGG
FD556295       --> ..................................................
FD557450       --> TGAG-CGGCCGGAGCTG.................................
EY940520       --> ..................................................
FD568779       --> ..................................................
FD964086       --> ..................................................
EY897100       --> ..................................................
EY898437       --> TGAG-CGGCCGGAGCTGAG-ACGGGGGGGGAATTGA..............
EY901273       --> ..................................................

               801    -    851
UN10088        --> CAAGGTTGGACAACCTTCGAAAAATGTGAGGCTTTCCCGGTTTCTGTATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY893506       <-- CAAGGTTGGACAACCTTCGAAAAATGTGAGGCTTTCCCGGTTTCTGTATA
FD960204       <-- CAAGGTTGGACAACCTTCGAAAAATGTGAGGCTTTCCCGGTTTCTGTATA
FD573082       <-- CAAGGTTGGACAACCTTCGAAAAATGTGAGGCTTTCCCGGTTTCTGTATA
EY894498       <-- CAAGGTTGGACAACCTTCGAAAAATGTGAGGCTTTCCCGGTTTCTGTATA
EY936269       <-- CATGGTTGGACAACCTTCGAAAAATGTGAGGCTTTCCCGGTTTCTGTATA
FD556295       --> ..................................................
FD557450       --> ..................................................
EY940520       --> ..................................................
FD568779       --> ..................................................
FD964086       --> ..................................................
EY897100       --> ..................................................
EY898437       --> ..................................................
EY901273       --> ..................................................

               851    -    901
UN10088        --> ATATTGTTGATTTGTTACCTGATTATTACTTTTAAACTCCAAAGGAATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY893506       <-- ATATTGTTGATTTGTTACCTGATTATTACTTTTAAACTCCAAAGGAATAT
FD960204       <-- ATATTGTTGATTTGTTACCTGATTATTACTTTTAAACTCCAAAGGAATAT
FD573082       <-- ATATTGTTGATTTGTTACCTGATTATTACTTTTAAACTCCAAAGGAATAT
EY894498       <-- ATATTGTTGATTTGTTACCTGATTATTACTTTTAAACTCCAAAGGAATAT
EY936269       <-- ATATTGTTGATTTGTTACCTGATTATTACTTTTAAACTCCAAAGGAATAT
FD556295       --> ..................................................
FD557450       --> ..................................................
EY940520       --> ..................................................
FD568779       --> ..................................................
FD964086       --> ..................................................
EY897100       --> ..................................................
EY898437       --> ..................................................
EY901273       --> ..................................................

               901    -    951
UN10088        --> ATGGCAAACCAGAGTTTTAAGGATGTGTTTGTAATCATTTCATAATTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY893506       <-- ATGGCAAACCAGAGTTTTAAGGATGTGTTTGTAATCATTTCATAATTTGA
FD960204       <-- ATGGCAAACCAGAGTTTTAAGGATGTGTTTGTAATCATTTCATAATTTGA
FD573082       <-- ATGGCAAACCAGAGTTTTAAGGATGTGTTTGTAATCATTTCATAATTCGA
EY894498       <-- ATGGCAAACCAGAGTTTTAAGGATGTG--TGTAATCATTTCATAATTTGA
EY936269       <-- ATGGCAAACCAGAGTTTTAAGGATGTGTTTGTAATCATTTCATAATTTGA
FD556295       --> ..................................................
FD557450       --> ..................................................
EY940520       --> ..................................................
FD568779       --> ..................................................
FD964086       --> ..................................................
EY897100       --> ..................................................
EY898437       --> ..................................................
EY901273       --> ..................................................

               951    -   1001
UN10088        --> GCCCCTGAATTTATAAAATCTCATTGTTGTCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY893506       <-- GCCCCTGAATTTAT...................
FD960204       <-- GCCCCTGAATTTATAAAA...............
FD573082       <-- GCCCCTGAATTTATAAAATCTCATTGTTGTCC.
EY894498       <-- GCCCCTGAATTTATAAAATCTCATTGTTGTCCG
EY936269       <-- GCCCCTGAATTTATAAAATCTCATTGTTGcc..
FD556295       --> .................................
FD557450       --> .................................
EY940520       --> .................................
FD568779       --> .................................
FD964086       --> .................................
EY897100       --> .................................
EY898437       --> .................................
EY901273       --> .................................