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Alignment for radish unigene UN10178

               1      -     51
UN10178        --> CTTTTCGAAATAAATCTCTAATTTTTAATTCAGATTTTGAGTTATAAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921114       <-- .....gGAAATAAATCTCTAATTTT-AATTCAGATTT-GAGTTATAAGCA
EV568906       <-- ...........................ATTCAGATTT-GAG-TATAAGCA
EX764191       <-- ..................................................
EY916146       <-- ..................................................
EY916370       <-- ..................................................
FD989224       <-- ..................................................
EX754121       <-- ..................................................
EV573530       --> CTTTTCGAAATAAATCTCTAATTTTTAATTCAGATTTTGAGTTATAAGCA
EY911873       --> .....CGAAATAAATCTCTAATTTTTAATTCAGATTTTGAGTTATAAGCA
EY917323       --> .....gGAAATAAATCTCTAATTTTTAATTCAGATTTTGAGTTATAAGCA
EY912056       --> ..................................................
FD985037       --> ..................................................

               51     -    101
UN10178        --> GCAGACAACTGAAATAAAAGCAGAATGGTAGTATCTTTTATCAAGTGGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921114       <-- GCAGACAACTGAAATAAAAGCAGAATGGTAGTATCTTT-ATCAAGTGGCT
EV568906       <-- GCAGACAACTGAAATAAAAGCAGAATGGTAGTATCTTTTATCAAGTGGCT
EX764191       <-- ..................................................
EY916146       <-- ..................................................
EY916370       <-- ..................................................
FD989224       <-- ..................................................
EX754121       <-- ..................................................
EV573530       --> GCAGACAACTGAAATAAAAGCAGAATGGTAGTATCTTTTATCAAGTGGCT
EY911873       --> GTAGACAACTGAAATAAAAGCAGAATGGTAGTATCTTTTATCAAGTGGCT
EY917323       --> GCAGACAACTGAAATAAAAGCAGAATGGTAGTATCTTTTATCAAGTGGCT
EY912056       --> ...............AAAAGCAGAATGGTAGTATCTTTTATCAAGTGGCT
FD985037       --> ...............AAAAGCAGAATGGTAGTATCTTTTATCAAGTGGCT

               101    -    151
UN10178        --> AAGATAGTCGTTTAAACACAAAAGTCTTCACGCACTAGATTTAGCTCACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921114       <-- AAGATAGTCGTTTAAACACAAAAGTCTTCACGCACTAGATTTAGCTCACA
EV568906       <-- AAGATAGTCGTTTAAACACAAAAGTCTTCACGCACTAGATTTAGCTCACA
EX764191       <-- ..................CAAAAGTCT-CACGCACTAGATT-AGCTCACA
EY916146       <-- ............................CACGCACTAGATTTAGCTCACA
EY916370       <-- .............................ACGCACTAGATTTAGCTCACA
FD989224       <-- ..............................CGCACTAGATTTAGCTCACA
EX754121       <-- ..................................................
EV573530       --> AAGATAGTCGTTTAAACACAAAAGTCTTCACGCACTAGATTTAGCTCACA
EY911873       --> AAGATAGTCGTTTAAACACAAAAGTCTTCACGCACTAGATTTAGCTCACA
EY917323       --> AAGATAGTCGTTTAAACACAAAAGTCTTCACGCACTAGATTTAGCTCACA
EY912056       --> AAGATAGTCGTTTAAACACAAAAGTCTTCACGCACTAGATTTAGCTCACA
FD985037       --> AAGATAGTCGTTTAAACACAAAAGTCTTCACGCACTAGATTTAGCTCACA

               151    -    201
UN10178        --> TCAATGGCTGATGAGATGGAGAAAAACTACATGAAAGTTGAGTTACAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921114       <-- TCAATGGCTGATGAGATGGAGAAAAACTACATGAAAGTTGAGTTACAGAG
EV568906       <-- TCAATGGCTGATGAGATGGAGAAAAACTACATGAAAGTTGAGTTACAGAG
EX764191       <-- TCAATGGCTGATGAGATGGAGAAAAACTACATGAAAGTTGAGTTACAGAG
EY916146       <-- TCAATGGCTGATGAGATGGAGAAAAACTACATGAAAGTTGAGT-ACAGAG
EY916370       <-- TCAATGGCTGATGAGATGGAGAAAAACTACATGAAAGTTGAGT-ACAGAG
FD989224       <-- TCAATGGCTGATGAGATGGAGAAAAACTACATGAAAGTTGAGTTACAGAG
EX754121       <-- ........................agCTACATGAGAGTTGAGTTACAGGG
EV573530       --> TCAATGGCTGATGAGATGGAGAAAAACTACATGAAAGTTGAGTTACAGAG
EY911873       --> TCAATGGCTGATGAGATGGAGAAAAACTACATGAAAGTTGAGTTACAGAG
EY917323       --> TCAATGGCTGATGAGATGGAGAAAAACTACATGAAAGTTGAGTTACAGAG
EY912056       --> TCAATGGCTGATGAGATGGAGAAAAACTACATGAAAGTTGAGTTACAGAG
FD985037       --> TCAATGGCTGATGAGATGGAGAAAAACTACATGAAAGTTGAGTTACAGAG

               201    -    251
UN10178        --> GAAGCTCACCACTGTCGACAATCACAACTTTACTCTTAGGAGTTCCACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921114       <-- GAAGCTCACCACTGTCGACAATCACAACTTTACTCTTAGGAGTTCCACTC
EV568906       <-- GAAGCTCACCACTGTCGACAATCACAACTTTACTCTTAGGAGTTCCACTC
EX764191       <-- GAAGCTCACCACTGTAGACAATCACAACTTTACTCTTAGGAGTTCCACTC
EY916146       <-- GAAGCTCACCACTGTCGACAATCACAACTTTACTCTTAGGAGTTCCACTC
EY916370       <-- GAAGCTCACCACTGTCGACAATCACAACTTTACTCTTAGGAGTTCCACTC
FD989224       <-- GAAGCTCACCACTGTCGACAATCACAACTTTACTCTTAGGAGTTCCACTC
EX754121       <-- GAAGCTCACCACTGTCGACAATCACAACTTTACTCTTAGGAGTTCCACTC
EV573530       --> GAAGCTCACCACTGTCGACAATCACAACTTTACTCTTAGGAGTTCCACTC
EY911873       --> GAAGCTCACCACTGTCGACAATCACAACTTTACTCTTAGGAGTTCCACTC
EY917323       --> GAAGCTCACCACTGTCGACAATCACAACTTTACTCTTAGGAGTTCCACTC
EY912056       --> GAAGCTCACCACTGTCGACAATCACAACTTTACTCTTAGGAGTTCCACTC
FD985037       --> GAAGCTCACCACTGTCGACAATCACAACTTTACTCTTAGGAGTTCCACTC

               251    -    301
UN10178        --> TGATTACCCTCAGCTTCGACTTTGTACACCACGTCCATTCCCGACACGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921114       <-- TGATTACCCTCAGCTTCGACTTTGTACACCACGTCCATTCCCGACACGAC
EV568906       <-- TGATTACCCTCAGTTTCGACTTTGTACACCACGTCCATTCCCGACACGAC
EX764191       <-- TGATTGCCCTCAGCTTCGACTTTGTACACCACGTCCATTCCCGACACGAC
EY916146       <-- TGATTACCCTCAGCTTCGACTTTGTACACCACGTCCATTCCCGACACGAC
EY916370       <-- TGATTACCCTCAGCTTCGACTTTGTACACCACGTCCATTCCCGACACGAC
FD989224       <-- TGATTACCCTCAGCTTCGACTTTGTACACCACGTCCATTCCCGACACGAC
EX754121       <-- TGATTACCCTCAGCTTCGACTTTGTACACCACGTCCATTCCCGACACTAC
EV573530       --> TGATTACCCTCAGTTTCGACTTTGTACACCACGTCCATTCCCGACACGAC
EY911873       --> TGATTACCCTCAGCTTCGACTTTGTACACCACGTCCATTCCCGACACGAC
EY917323       --> TGATTACCCTCAGCTTCGACTTTGTACACCACGTCCATTCCCGACACGAC
EY912056       --> TGATTACCCTCAGCTTCGACTTTGTACACCACGTCCATTCCCGACACGAC
FD985037       --> TGATTACCCTCAGCTTCGACTTTGTACACCACGTCCATTCCCGACACGAC

               301    -    351
UN10178        --> CTTCCCGAACACTACGTGTCTCCCGTCCAACCAGCTTGTTGTTACTGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921114       <-- CTTCCCGAACACTACGTGTCTCCCGTCCAACCAGCTTGTTGTTACTGTTG
EV568906       <-- CTTCCCGAACACTACGTGTCTCCCGTCCAACCAGCTTGTTGTTACTGTTG
EX764191       <-- CTTCCCGAACACTACGTGTCTCCCGTCCAACCAGCTTGTTGTTACTGTTG
EY916146       <-- CTTCCCGAACACTACGTGTCTCCCGTCCAACCAGCTTGTTGTTACTGTTG
EY916370       <-- CTTCCCGAACACTACGTGTCTCCCGTCCAACCAGCTTGTTGTTACTGTTG
FD989224       <-- TTTCCCGAACACTACGTGTCTCCCGTCCAACCAGCTTGTTGTTACTGTTG
EX754121       <-- CTTCCCGAATACTACGTGCCTCCCGTCCAACCAGCTTGTTGTCACTGTTG
EV573530       --> CTTCCCGAACACTACGTGTCTCCCGTCCAACCAGCTTGTTGTTACTGTTG
EY911873       --> CTTCCCGAACACTACGTGTCTCCCGTCCAACCAGCTTGTTGTTACTGTTG
EY917323       --> CTTCCCGAACACTACGTGTCTCCCGTCCAACCAGCTTGTTGTTACTGTTG
EY912056       --> CTTCCCGAACACTACGTGTCTCCCGTCCAACCAGCTTGTTGTTACTGTTG
FD985037       --> CTTCCCGAACACTACGTGTCTCCCGTCCAACCAGCTTGTTGTTACTGTTG

               351    -    401
UN10178        --> TGATGAAAAACTGAGATCCGTTGGTGTCTTGGCCAGCGTTTGCCATAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921114       <-- TGATGAAAAACTGAGATCCGTTGGTGTCTTGGCCAGCGTTTGCCATAGAT
EV568906       <-- TGATGAAAAACTGAGATCCGTTGGTGTCTTGGCCAGCGTTTGCCATAGAT
EX764191       <-- TGATGAAAAACTGAGATCCGTTGGTGTCTTGGCCAGCGTTTGCCATAGAT
EY916146       <-- TGATGAAAAACTGAGATCCGTTGGTGTCTTGGCCAGCGTTTGCCATAGAT
EY916370       <-- TGATGAAAAACTGAGATCCGTTGGTGTCTTGGCCAGCGTTTGCCATAGAT
FD989224       <-- TGATGAAAAACTGAGATCCGTTGGTGTCTTGGCCAGCGTTTGCCATAGAT
EX754121       <-- TGATGAAAAACTGAGAACCGTTGGTGTCTTGGCCGGCGTTTGCCATTGAT
EV573530       --> TGATGAAAAACTGAGATCCGTTGGTGTCTTGGCCAGCGTTTGCCATAGAT
EY911873       --> TGATGAAAAACTGAGATCCGTTGGTGTCTTGGCCAGCGTTTGCCATAGAT
EY917323       --> TGATGAAAAACTGAAATCCGTTGGTGTCTTGGCCAGCGTTTGCCATAAAT
EY912056       --> TGATGAAAAACTGAGATCCGTTGGTGTCTTGGCCAGCGTTTGCCATAGAT
FD985037       --> TGATGAAAAACTGAGATCCGTTGGTGTCTTGGCCAGCGTTTGCCATAAAT

               401    -    451
UN10178        --> AGAAGCCCTGGACCAGTATGCTTGAGTTTGAAGTTCTCATCAGGAAACGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921114       <-- AGAAGCCCTGGACCAGTATGCTTGAGTTTGAAGTTCTCATCAGGAAACGT
EV568906       <-- AGAAGCCCTGGACCAGTATGCTTGAGTTTGAAGTTCTCATCAGGAAACGT
EX764191       <-- AGAAGCCCTGGACCAGTATGCTTGAGTTTGAAGTTCTCATCAGGAAACGT
EY916146       <-- AGAGGCCCTGGACCAGTATGCTTGAGTTTGAAGTTCTCATCAGGAAACGT
EY916370       <-- AGAAGCACTGGACCAGTATGCTTGAGCTTGAAGTTCTCATCAGGAAACGT
FD989224       <-- AGAAGCCCTGGACCAGTATGCTTGAGTTTGAAGTTCTCATCAGGAAGCGT
EX754121       <-- AGAAGCCCTGGACCAGTATGCTTGAGTTTGAAGTTCTCATCAGGAAACGT
EV573530       --> AGAAGCCCTGGACCAGTATGCTTGAGTTTGAAGTTCTCATCAGGAAACGT
EY911873       --> AGAGGCCCTGGACCAGTATGCTTGAGTTTGAAGTTCTCATCAGGAAACGT
EY917323       --> AGAAGCCCTGGACCAGTATGCTTGAGTTTGAAGTTCTCATCAGGAAACGT
EY912056       --> AGAAGCACTGGACCAGTATGCTTGAGCTTGAAGTTCTCATCAGGAAACGT
FD985037       --> AGAAGCCCTGGACCAGTATGCTTGAGTTTGAAGTTCTCATCAGGAAGCGT

               451    -    501
UN10178        --> CTCACCATAGATAGACTCTCCTCCCATACCATTGCCATGGGTGAAATCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921114       <-- CTCACCATAGATAGACTCTCCTCCCATACCATTGCCATGGGTGAAATCGC
EV568906       <-- CTCACCATAGATAGACTCTCCTCCCATACCATTGCCATGGGTGAAATCGC
EX764191       <-- --CACCATAGATAGACTCTCCTCCCATACCATTGCCATGGGTGAAATCGC
EY916146       <-- CTCACCATAGATAGACTCTCCTCCCATACCATTGCCATGGGTGAAATCGC
EY916370       <-- CTCACCATAGATAGACTCTCCTCCCATACCATTGCCATGGGTGAAATCGC
FD989224       <-- CTCACCATAGATAGACTCTCCTCCCATACCATTGCCATGGGTGAAATCGC
EX754121       <-- CTCACCGTAGATAGACTCTCCTCCCATACCATTGCCATGGGTGAAATCGC
EV573530       --> CTCACCATAGATAGACTCTCCTCCCATACCATTGCCATGGGTGAAATCGC
EY911873       --> CTCACCATAGATAGACTCTCCTCCCATACCATTGCCATGGGTGAAATCGC
EY917323       --> CTCACCATAGATAGACTCTCCTCCCATACCATTGCCATGGGTGAAATCGC
EY912056       --> CTCACCATAGATAGACTCTCCTCCCATACCATTGCCATGGGTGAAATCGC
FD985037       --> CTCACCATAGATAGACTCTCCTCCCATACCATTGCCATGGGTGAAATCGC

               501    -    551
UN10178        --> CTGCCTGGAGCATAAAGCTTGGTATGACCCTATGAAACGAGCTCCCCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921114       <-- CTGCCTGGAGCATAAAGCTTGGTATGACCCTATGAAACGAGCTCCCCTTG
EV568906       <-- CTCCCTGGAGCATAAAGCTTGGTATGACCCTATGAAACGAGCTCCCCTTG
EX764191       <-- CTGCCTGGAGCATAAAGCTTGGTATGACCCTATGAAACGAGCTCCCCTTG
EY916146       <-- CTGCCTGGAGCATAAAGCTTGGTATGACCCTATGAAACGAGCTCCCCTTG
EY916370       <-- CTGCCTGGAGCATAAAGCTTGGTATGACCCTATGAAACGAGCTCCCCTTG
FD989224       <-- CTGCCTGGAGCATAAAGCTTGGTATGACCCTATGAAACGAGCTCCCCTTG
EX754121       <-- CTCCCTGGAGCATAAAGCTTGGTATGACCCTGTGGAACGAGCTACCCTTG
EV573530       --> CTCCCTGGAGCATAAAGCTTGGTATGACCCTATGAAACGAGCTCCCCTTG
EY911873       --> CTGCCTGGAGCATAAAGCTTGGTATGACCCTATGAAACGAGCTCCCCTTG
EY917323       --> CTGCCTGGAGCATAAAGCTTGGTATGACCCTATGAAACGAGCTCCCCTTG
EY912056       --> CTGCCTGGAGCATAAAGCTTGGTATGACCCTATGAAACGAGCTCCCCTTG
FD985037       --> CTGCCTGGAGCATAAAGCTTGGTATGACCCTATGAAACGAGCTCCCCTTG

               551    -    601
UN10178        --> TAATGTAGAGCCTTCCCTTTCTTACCTATTCCCTTTTCCCCTGTGCACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921114       <-- TAATGTAGAGCCTTCCCTTTCTTACCTATTCCCTTTTCCCCTGTGCACAA
EV568906       <-- TAATGTAGAGCCTTCCCTT--TTACCTATTCCCTTTTCCCCTGTGCACAA
EX764191       <-- TAATGTAGAGCCTTCCCTTTCTTACCTATTCCCTTTTCCCCTGTGCACAA
EY916146       <-- TAATGTAGAGCCTTCCCTTTCTTACCTATTCCCTTTTCCCCTGTGCACAA
EY916370       <-- TAATGTAGAGCCTTCCCTTTCTTACCTATTCCCTTTTCCCCTGTGCACAA
FD989224       <-- TAATGTAGAGCCTTCCCTTTCTTACCTATTCCCTTTTCCCCTATGCACAA
EX754121       <-- TAATGTAGAGCCTTCCCTTTCTTACCTATTCCCTTTTCCCCTGTGCACAA
EV573530       --> TAATGTAGAGCCTTCCCTTT--TACCTATTCCCTTTTCCCCTGTGCACAA
EY911873       --> TAATGTAGAGCCTTCCCTTTCTTACCTATTCCCTTTTCCCCTGTGCACAA
EY917323       --> TAATGTAGAGCCTTCCCTTTCTTACCTATTCCCTTTTCCCCTGTGCACAA
EY912056       --> TAATGTAGAGCCTTCCCTTTCTTACCTATTCCCTTTTCCCCTGTGCACAA
FD985037       --> TAATGTAGAGCCTTCCCTTTCTTACCTATTCCCTTTTCCCCTATGCACAA

               601    -    651
UN10178        --> AGCTCGAAAATTCTCTGCAGTTTTAGGGACTGTCTTTTCATATAGACCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921114       <-- AGCTCGAAAATTCTCTGCAGTTTTAGGGACTGTCTTTTCATATAGACCCA  Raphanus raphanistrum subsp. landra
EV568906       <-- AGCTCGAAAATTCTCTGCAGTTTTAGGGACTGTCTTTTCATATAGACCCA  Raphanus raphanistrum subsp. landra
EX764191       <-- AGCTCGAAAATTCTCTGCAGTTTTAGGGACTGTCTTTCCATATAGACCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY916146       <-- AGCTCGAAAATTCTCTGCAGTTTTAGGGACTGTCTTTCCATATAGACCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY916370       <-- AGCTCGAAAATTCTCTGCAGTTTTAGGGACTGTCTTTCCATATAGACCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD989224       <-- AGCTCGAAAATTCTCTGCAGTTTTAGGGACTGTCTTTTCATATAGACCCA  Raphanus raphanistrum subsp. landra
EX754121       <-- AGCTCGAAAATTCTCTGCAGTTTTAGGGACTGTCTTTCCATATAAACCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV573530       --> AGCTCGAAAATTCTCTGCAGTTTTAGGGACTGTCTTTTCATATAGACCCA  Raphanus raphanistrum subsp. landra
EY911873       --> AGCTCGAAAATTCTCTGCAGTTTTAGGGACTGTCTTTCCATATAGACCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY917323       --> AGCTCGAAAATTCTCTGCAGTTTTAGGGACTGTCTTTTCATATAGACCCA  Raphanus raphanistrum subsp. landra
EY912056       --> AGCTCGAAAATTCTCTGCAGTTTTAGGGACTGTCTTTCCATATAGACCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD985037       --> AGCTCGAAAATTCTCTGCAGTTTTAGGGACTGTCTTTTCATATAGACCCA  Raphanus raphanistrum subsp. landra

               651    -    701
UN10178        --> TGACAATACGGCCAGCTTCTTTCCCATCAATCTCAACATCGAAAAAAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921114       <-- TGACAATACGGCCAGCTTCTTTCCCATCAATCTCAACATCGAAAAAAACC
EV568906       <-- TGACAATACGGCCAGCTTCTTTCCCATCAATCTCAACATCGAAAAAAACC
EX764191       <-- TGACAATACGGCCAGCTTCTTTCCCATCAATCTCAACATCGAAAAAAACC
EY916146       <-- TGACAATACGGCCAGCTTCTTTCCCATCAATCTCAACATCGAAAAAAACC
EY916370       <-- TGACAATACGGCCAGCTTCTTTCCCATCAATCTCAACATCGAAAAAAACC
FD989224       <-- TGACAATACGGCCAGCTTCTTTCCCATCAATCTCAACATCGAAAAAAACC
EX754121       <-- TGACAATACGGCCAGCTTCTTTCCCATCAATCTCAACATCGAAATAAACC
EV573530       --> TGACAATACGGCCAGCTTCTTTCCCATCAATCTCAACATCGAAAAAAACC
EY911873       --> TGACAATACGGCCAGCTTCTTTCCCATCAATCTCAACATC..........
EY917323       --> TG................................................
EY912056       --> TGACAATACGGCCAGCTTCTTTCCCATCAATCTCAACATCGAAAAAAACC
FD985037       --> TGACAATACGGCCAGCTTCTTTCCCATCAATCTCAACATCGAAAAAAACC

               701    -    751
UN10178        --> TTGTGTGTGATCTCCTTTAAGTTCTCCTTTGACTTCTTGGCCTGAATCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921114       <-- TTGTGTGTGATCTCCTTTAAGTTCTCCTTTGACTTCTTGGCCTGAATCGC
EV568906       <-- TTGTGTGTGATCTCCTTTAAGTTCTCCTTTGACTTCTTGGCCTGAATCGC
EX764191       <-- TTGTGTGTGATCTCCTTTAAGTTCTCCTTTGACTTCTTGGCCTGAGTCGC
EY916146       <-- TTGTGTGTGATCTCCTTTAAGTTCTCCTTTGACTTCTTGGCCTGAATCGC
EY916370       <-- TTGTGTGTGATCTCCTTTAAGTTCTCCTTTGACTTCTTGGCCTGAATCGC
FD989224       <-- TTGTGTGTGATCTCCTTTAAGTTCTCCTTTGACTTCTTGGCCTGAATCGC
EX754121       <-- TTGTGTGTGATCTCCTTTAAGTTCTCCTTTGACTTCTTGGCCTGAATCGC
EV573530       --> TTGTGTGTGATCTCCTTTAAGTTCTCCTTTGACTTCTTGGCCTGAATCGC
EY911873       --> ..................................................
EY917323       --> ..................................................
EY912056       --> TTGTGTGTGATCTCCTTTAAGTTCTCCTTTGACTTCTTGGCCTGAATCGC
FD985037       --> TTGTGTGTGATCTCCTTTAAGTTCTCCTTTGACTTCTTGGCCTGAATCGC

               751    -    801
UN10178        --> GCTTAGGGTTCCGAGAAGAAGAAGACTACACAGAAGCAGCGTCACTGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921114       <-- GCTTAGGGTTCCTAGAAGAAGAAGACTACACAGAAGCAGCGTCACTGAGC
EV568906       <-- GCTTAGGGTTCCGAGAAGAAGAAGACTACACAGAAGCAGCGTCACTGAGC
EX764191       <-- GCTTAGGGTTCCGAGAAGAAGAAGACTACACAGAAGCAGCGTCACTGAGC
EY916146       <-- GCTTAGGGTTCCGAGAAGAAGAAGACTACACAGAAGCAGCGTCACTGAGC
EY916370       <-- GCTTAGGGTTCCGAGAAGAAGAAGACTACACAGAAGCAGCGTCACTGAGC
FD989224       <-- GCTTAGGGTTCCGAGAAGAAGAAGACTACACAGAAGCAGCGTCACTGAGC
EX754121       <-- GCTTAGGGTTCCGAGAAGAAGAAGACTACACATAAGCAGCGTCACTGAGC
EV573530       --> GCTTAGGGTTCCGAGAAGAAGAAGACTACACAGAAGCAGCGTCACTGAGC
EY911873       --> ..................................................
EY917323       --> ..................................................
EY912056       --> GC................................................
FD985037       --> GCTTAGGGTTCCGAGAAGAAGAAGACTACACAGAAGCAGCGTCACTGAGC

               801    -    851
UN10178        --> TCGCCATCTCGCACTGTTCAGCAAAGGGTTTGTTTCTCTCTCTCTCTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY921114       <-- TCGCCCTCTCGCACTGTTCAGCAAAGGGTTTGTTTCTCTCctggatccc.  Raphanus raphanistrum subsp. landra
EV568906       <-- TCGCCATCTCGCACTGTTCAGCAAAGGGTTTGTTTCTCTCctggatctcc  Raphanus raphanistrum subsp. landra
EX764191       <-- TCGCCATCTCGCACCGTTCAGCAAAGTGTTTGTCTCTCTCTCTCTCTCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY916146       <-- TCGCCATCTCGCACCGTTCAGCAAAGTGTTTGTCTCTCTCTCTCTCTCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY916370       <-- TCGCCATCTCGCACCGTTCAGCAAAGTGTTTGTCTCACTCTCTCTCTCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD989224       <-- TCGCCATCTCGCACTGTTCAGCAAAGGGTTTcc.................  Raphanus raphanistrum subsp. landra
EX754121       <-- TCGCCATCTCGCACCGTTCcgttcagtaaagtgttttcc...........  Raphanus raphanistrum subsp. raphanistrum (MS)
EV573530       --> TCGCCATCTCGCACTGTTCAGCAAAGGGTTTGTTTCTCTCctggatctcc  Raphanus raphanistrum subsp. landra
EY911873       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY917323       --> ..................................................  Raphanus raphanistrum subsp. landra
EY912056       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD985037       --> TCGCCATCTCGCACTGT.................................  Raphanus raphanistrum subsp. landra

               851    -    901
UN10178        --> TCTCTGTATCCGCCCTGCGCATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~
EY921114       <-- ........................
EV568906       <-- ........................
EX764191       <-- TCTCTctctctctctctcc.....
EY916146       <-- TCTCTGTATCCGCCCTGCGCATCC
EY916370       <-- TCTCTccc................
FD989224       <-- ........................
EX754121       <-- ........................
EV573530       --> ........................
EY911873       --> ........................
EY917323       --> ........................
EY912056       --> ........................
FD985037       --> ........................