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Alignment for radish unigene UN10190

               1      -     51
UN10190        --> GGATTACACGAGCGTAATAAACTAGGATTGTTCATGTCTTTTTT-AGTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920428       <-- ..................................................
FD950475       <-- ..................................................
FD575944       <-- ..................................................
FD530827       <-- ..................................................
EY919278       <-- ..................................................
FD530449       <-- ..................................................
FD961316       <-- ..................................................
FD982971       <-- ..................................................
EY893682       <-- ..................................................
EY925544       <-- ..................................................
EY939979       --> GGATTACACGAGCGTAATAAACTAGGATTGTTCATGTCTTTTTTTAGTTA
FD965627       --> ...ggACACGAGCGTAATAAACTAGGATTGTCCATGTCTTTTTT-AGTTA
EY924819       --> ..................................................
EY908120       --> ..................................................
FY441680       --> ..................................................
FD572268       --> ..................................................
FD974307       --> ..................................................
FD535071       --> ..................................................
EY900580       --> ..................................................
FD534543       --> ..................................................
EY897328       --> ..................................................
EV544364       --> ..................................................
EY921001       --> ..................................................
EV543761       --> ..................................................

               51     -    101
UN10190        --> GTTCCGTCTTCTGATCTCCTTCGTTGCACCGACTCTCGTTCAATCTTAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920428       <-- ..................................................
FD950475       <-- ..................................................
FD575944       <-- ..................................................
FD530827       <-- ..................................................
EY919278       <-- ..................................................
FD530449       <-- ..................................................
FD961316       <-- ..................................................
FD982971       <-- ..................................................
EY893682       <-- ..................................................
EY925544       <-- ..................................................
EY939979       --> GTTCCGTCTTCTGATCTCCTTCGTTGCACCGACTCTCGTTCAATCTTAGA
FD965627       --> GTTCCGTCTTCTGATCTCCTTCGTTGCACCGACTCTCGTTCAATCTTAGA
EY924819       --> ..................CTTCGTTGCACCGACTCTCGTTCAATCTTAGA
EY908120       --> ....................ggGTTGCACCGACTCTCGTTCAATCTTAGA
FY441680       --> ........................................catctTTAGA
FD572268       --> ............................................gggAGA
FD974307       --> ..................................................
FD535071       --> ..................................................
EY900580       --> ..................................................
FD534543       --> ..................................................
EY897328       --> ..................................................
EV544364       --> ..................................................
EY921001       --> ..................................................
EV543761       --> ..................................................

               101    -    151
UN10190        --> TCCGATCGACAAAACGATGTCGATGTCTCATAATGTATCGTTTTTGTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920428       <-- ..................................................
FD950475       <-- ..................................................
FD575944       <-- ..................................................
FD530827       <-- ..................................................
EY919278       <-- ..................................................
FD530449       <-- ..................................................
FD961316       <-- ..................................................
FD982971       <-- ..................................................
EY893682       <-- ..................................................
EY925544       <-- ..................................................
EY939979       --> TCCGATCGACAAAACGATGTCGATGTCTCATAATGTATCGTTTTTGTTCT
FD965627       --> TCCGATCGACAAAACGATGTCGATGTCTCATAATGTATCGTTTTTGTTCT
EY924819       --> TCCGATCGACAAAACGATGTCGATGTCTCATAATGTATCGTTTTTGTTCT
EY908120       --> TCCGATCCACAAAACGATGTCGATGTCTCATAATGTATCGTTTTTGTTCT
FY441680       --> TCCGATCCACAAAACGATGTCGATGTCTCATAATGTATCGTTTTTGTTCT
FD572268       --> TCCGATCGACAAAACGATGTCGATGTCTCATAATGTATCGTTTTTGTTCT
FD974307       --> ...........AAACGATGTCGATGTCTCATAATGTATCGTTTATGTTCT
FD535071       --> ..................................................
EY900580       --> ..................................................
FD534543       --> ..................................................
EY897328       --> ..................................................
EV544364       --> ..................................................
EY921001       --> ..................................................
EV543761       --> ..................................................

               151    -    201
UN10190        --> TGGCTATATTATTTTTCTCCGTCCTGCTTCAATCTTCCACAAGCGCAATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920428       <-- ..................................................
FD950475       <-- ..................................................
FD575944       <-- ..................................................
FD530827       <-- ..................................................
EY919278       <-- ..................................................
FD530449       <-- ..................................................
FD961316       <-- ..................................................
FD982971       <-- ..................................................
EY893682       <-- ..................................................
EY925544       <-- ..................................................
EY939979       --> TGGCTATATTATTTTTCTCCGTCCTGCTTCAATCTTCCACAAGCGCAATT
FD965627       --> TGGCTATATTATTTTTCTCCTTCCTGCTTCAATCTTCCACAAGCGCAATT
EY924819       --> TGGCTATATTATTTTTCTCCGTCCTGCTTCAATCTTCCACAAGCGCAATT
EY908120       --> TGGCTATATTATTTTTCTCCGTCCTGCTTCAATCTTCCACAAGCGCAATT
FY441680       --> TGGCTATATTATTTTTCTCCGTCCTGCTTCAATCTTCCACAAGCGCAATT
FD572268       --> TGGCTATATTATTTTTCTCCGTCCTGCTTCAATCTTCCACAAGCGCAATT
FD974307       --> TGGCTATATTATTTTTCTCCGTCCTGCTCCAATCTTCCACAAGCGCAATT
FD535071       --> ...........TTTTTCTCCGTCCTGCTTCAATCTTCCACAAGCGCAATT
EY900580       --> ..................................gTCCACAAGCGCAATT
FD534543       --> ..................................................
EY897328       --> ..................................................
EV544364       --> ..................................................
EY921001       --> ..................................................
EV543761       --> ..................................................

               201    -    251
UN10190        --> GTTAATCCTTCCAAAGTGAAGCAGGTTTCATCCAAACCCAGGGCGTTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920428       <-- ..................................................
FD950475       <-- ..................................................
FD575944       <-- ..................................................
FD530827       <-- ..................................................
EY919278       <-- ..................................................
FD530449       <-- ..................................................
FD961316       <-- ..................................................
FD982971       <-- ..................................................
EY893682       <-- ..................................................
EY925544       <-- ..................................................
EY939979       --> GTTAATCCTTCCAAAGTGAAGCAGGTT-CATCCAAACCCAGG........
FD965627       --> GTTAATCCTTCCAAAGTGAAGCAGGTTTCATCCAAACCCAGGGCGTTTGT
EY924819       --> GTTAATCCTTCCAAAGTGAAGCAGGTTTCATCCAAACCCAGGGCGTTTGT
EY908120       --> GTTAATCCTTCCAAAGTGAAGCAGGTTTCATCCAAACCCAGGGCGTTTGT
FY441680       --> GTTAATCCTTCCAAAGTGAAGCAGGTTTCGTCCAAACCCAGGGCGTTTGT
FD572268       --> GTTAATCCTTCCAAAGTGAAGCAGGTTTCATCCAAACCCAGGGCGTTTGT
FD974307       --> GTTAATCCTTCCAAAGTGAAGCAGGTTTCATCCAAACCCAGGGCGTTTGT
FD535071       --> GTTAATCCTTCCAAAGTGAAGCAGGTTTCATCCAAACCCAGGGCGTTTGT
EY900580       --> GTTAATCCTTCCAAAGTGAAGCAGGTTTCATCCAAACCCAGGGCGTTTGT
FD534543       --> ..................................................
EY897328       --> ..................................................
EV544364       --> ..................................................
EY921001       --> ..................................................
EV543761       --> ..................................................

               251    -    301
UN10190        --> GTATGAAGGGTTCCTCACGGAATTGGAATGTGATCATATGGTTTCGCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920428       <-- ..................................................
FD950475       <-- ..................................................
FD575944       <-- ..................................................
FD530827       <-- ..................................................
EY919278       <-- ..................................................
FD530449       <-- ..................................................
FD961316       <-- ..................................................
FD982971       <-- ..................................................
EY893682       <-- ..................................................
EY925544       <-- ..................................................
EY939979       --> ..................................................
FD965627       --> GTATGAAGGGTTCCTCACGGAATTGGAATGTGATCATATGGTTTCGCTTG
EY924819       --> GTATGAAGGGTTCCTCACGGAATTGGAATGTGATCATATGGTTTCGCTTG
EY908120       --> GTATGAAGGGTTCCTCACGGAATTGGAATGTGATCATATGGTTTCGCTTG
FY441680       --> GTATGAAGGGTTCCTCACGGAATTGGAATGCGATCATATGGTTTCGCTTG
FD572268       --> GCATGAAGGGTTCCTCACGGAATTGGAATGTGATCATATGGTTTCGCTTG
FD974307       --> GTATGAAGGGTTCCTCACGGAATTGGAATGTGATCATATGGTTTCGCTTG
FD535071       --> GTATGAAGGGTTCCTCACGGAATTGGAATGTGATCATATGGTTTCGCTTG
EY900580       --> GTATGAAGGGTTCCTCACGGAATTGGAATGTGATCATATGGTTTCGCTTG
FD534543       --> ..................................................
EY897328       --> ..................................................
EV544364       --> ..................................................
EY921001       --> ..................................................
EV543761       --> ..................................................

               301    -    351
UN10190        --> CAAAAGCGAGCCTCAAGAGATCAGCTGTAGCTGATAATGATAGTGGAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920428       <-- ..................................................
FD950475       <-- ..................................................
FD575944       <-- ..................................................
FD530827       <-- ..................................................
EY919278       <-- ..................................................
FD530449       <-- ..................................................
FD961316       <-- ..................................................
FD982971       <-- ..................................................
EY893682       <-- ..................................................
EY925544       <-- ..................................................
EY939979       --> ..................................................
FD965627       --> CAAAAGCGAGCCTCAAGAGATCAGCTGTAGCTGATAATGATAGTGGAGAG
EY924819       --> CAAAAGCGAGCCTCAAGAGATCAGCTGTAGCTGATAATGATAGTGGAGAG
EY908120       --> CAAAAGCGAGCCTCAAGAGATCAGCTGTAGCTGATAATGATAGTGGAGAG
FY441680       --> CAAAAGCGAGCCTCAAGAGATCAGCTGTAGCTGATAATGATAGTGGAGAG
FD572268       --> CAAAAGCGAGCCTCAAGAGATCAGCTGTAGCTGATAATGATAGTGGAGAG
FD974307       --> CAAAAGCGAGCCTCAAGAGATCAGCTGTAGCTGATAATGATAGTGGAGAG
FD535071       --> CAAAAGCGAGCCTCAAGAGATCAGCTGTAGCTGATAATGATAGTGGAGAG
EY900580       --> CAAAAGCGAGCCTCAAGAGATCAGCTGTAGCTGATAATGATAGTGGAGAG
FD534543       --> ..................................................
EY897328       --> ..................................................
EV544364       --> ..................................................
EY921001       --> ..................................................
EV543761       --> ..................................................

               351    -    401
UN10190        --> AGCAAGCTCAGCGAAGTTCGAACCAGCTCTGGCACCTTTATCCCCAAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920428       <-- .........................................CCCCAAAGC
FD950475       <-- ...........................................CCAAAGC
FD575944       <-- ..................................................
FD530827       <-- ..................................................
EY919278       <-- ..................................................
FD530449       <-- ..................................................
FD961316       <-- ..................................................
FD982971       <-- ..................................................
EY893682       <-- ..................................................
EY925544       <-- ..................................................
EY939979       --> ..................................................
FD965627       --> AGCAAGCTCAGCGAAGTTCGAACCAGCTCTGGCACCTTTATCCCCAAAGC
EY924819       --> AGCAAGCTCAGCGAAGTTCGAACCAGCTCTGGCACCTTTATCCCCAAAGC
EY908120       --> AGCAAGCTCAGCGAAGTTCGAACCAGCTCTGGCACCTTTATCCCCAAAGC
FY441680       --> AGCAAGCTCAGCGAGGTTCGAACCAGCTCTGGCACCTTTATCCCCAAAGC
FD572268       --> AGCAAGCTCAGCGAAGTTCGAACCAGCTCTGGCACCTTTATCCCCAAAGC
FD974307       --> AGCAAGCTCAGCGAGGTTCGAACCAGCTCTGGCACCTTTATCCCCAAAGC
FD535071       --> AGCAAGCTCAGCGAAGTTCGAACCAGCTCTGGCACCTTTATCCCCAAAGC
EY900580       --> AGCAAGCTCAGCGAAGTTCGAACCAGCTCTGGCACCTTTATCCCCAAAGC
FD534543       --> ..................................................
EY897328       --> ..................................................
EV544364       --> ..................................................
EY921001       --> ..................................................
EV543761       --> ..................................................

               401    -    451
UN10190        --> AAAGGATCCCATTGTTGCTGGTATAGAAGACAAGATCTCTACTTGGACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920428       <-- AAAGGATCCCATTGTTGCTGGTATAGAAGACAAGATCTCTACTTGGACAT
FD950475       <-- AAAGGATCCCATTGTTGCTGGTATAGAAGACAAGATCTCTACTTGGACAT
FD575944       <-- .........CATTGTTGCTGGTATAGAAGACAAGATCTCTACTTGGACAT
FD530827       <-- .....................TATAGAAGACAAGATCTCTACTTGGACAT
EY919278       <-- ..................................................
FD530449       <-- ..................................................
FD961316       <-- ..................................................
FD982971       <-- ..................................................
EY893682       <-- ..................................................
EY925544       <-- ..................................................
EY939979       --> ..................................................
FD965627       --> AAAGGATCCCATTGTTGCTGGTATAGAAGACAAGATCTCTACTTGGACAT
EY924819       --> AAAGGATCCCATTGTTGCTGGTATAGAAGACAAGATCTCTACTTGGACAT
EY908120       --> AAAGGATCCCATTGTTGCTGGTATAGAAGACAAGATCTCTACTTGGACAT
FY441680       --> AAAGGATCCCATTGTTGCTGGTATAGAAGACAAGATCTCCACTTGGACAT
FD572268       --> AAAGGATCCCATTGTTGCTGGTATAGAAGACAAGATCTCTACTTGGACAT
FD974307       --> AAAGGATCCCATTGTTGCTGGTATAGAAGACAAGATTTCCACTTGGACAT
FD535071       --> AAAGGATCCCATTGTTGCTGGTATAGAAGACAAGATCTCTACTTGGACAT
EY900580       --> AAAGGATCCCATTGTTGCTGGTATAGAAGACAAGATCTCTACTTGGACAT
FD534543       --> ..................................................
EY897328       --> ..................................................
EV544364       --> ..................................................
EY921001       --> ..................................................
EV543761       --> ..................................................

               451    -    501
UN10190        --> TTCTTCCTAAAGAGAATGGGGAAGACATTCAGGTACTGAGATACGAACAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920428       <-- TTCTTCCTAAAGAGAATGGGGAAGACATTCAGGTACTGAGATACGAACAC  Raphanus raphanistrum subsp. landra
FD950475       <-- TTCTTCCTAAAGAGAATGGGGAAGACATTCAGGTACTGAGATACGAGTAC  Raphanus sativus cv Rat-Tail Radish #3870
FD575944       <-- TTCTTCCTAAAGAGAATGGGGAAGGCATTCAGGTACTGAGATACGAACAC  Raphanus sativus cv Early Scarlet Globe
FD530827       <-- TTCTTCCTAAAGAGAATGGGGAAGACATTCAGGTACTGAGATACGAACAC  Raphanus raphanistrum subsp. maritimus
EY919278       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD530449       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD961316       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD982971       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY893682       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY925544       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY939979       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD965627       --> TTCTTCCTAAAGAGAATGGGGAAGACATTCAGGTACTGAGATACGAACAC  Raphanus raphanistrum subsp. maritimus
EY924819       --> TTCTTCCTAAAGAGAATGGGGAAGACATTCAGGTACTGAGATACGAACAC  Raphanus raphanistrum subsp. landra
EY908120       --> TTCTTCCTAAAGAGAATGGGGAAGACATTCAGGTACTGAGATATGAGTAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FY441680       --> TTCTTCCTAAAGAGAATGGGGAAGACATTCAAGTACTGAGATACGAGTAC  Raphanus sativus cv GSK3-1
FD572268       --> TTCTTCCTAAAGAGAATGGGGAAGGCATTCAGGTACTGAGATACGAACAC  Raphanus sativus cv Early Scarlet Globe
FD974307       --> TTCTTCCTAAAGAGAATGGGGAAGACATTCAGGTACTGAGATATGAGTAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD535071       --> TTCTTCCTAAAGAGAATGGGGAAGACATTCAGGTACTGAGATACGAACAC  Raphanus raphanistrum subsp. maritimus
EY900580       --> TTCTTCCTAAAGAGAATGGGGAAGACATTCAGGTACTGAGATACGAACAC  Raphanus raphanistrum subsp. maritimus
FD534543       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY897328       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV544364       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY921001       --> ..................................................  Raphanus raphanistrum subsp. landra
EV543761       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               501    -    551
UN10190        --> GGTCAAAAATACGATGCTCACTTTGACTACTTTCATGACAAAG-TCAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920428       <-- GGTCAAAAATACGATGCTCACTTTGACTACTTTCATGACAAAG-TCAACA  Raphanus raphanistrum subsp. landra
FD950475       <-- GGTCAAAAATACGATGCTCACTTTGACTACTTCCACGACAAAG-TGAATA  Raphanus sativus cv Rat-Tail Radish #3870
FD575944       <-- GGTCAAAAATACGATGCTCACTTTGACTACTTTCATGACAAAG-TCAACA  Raphanus sativus cv Early Scarlet Globe
FD530827       <-- GGTCAAAAATACGATGCTCACTTTGACTACTTTCATGACCAAGGTCAACA  Raphanus raphanistrum subsp. maritimus
EY919278       <-- ......AAATACGATGCTCACTTTGACTACTTTCATGACAAAG-TCAACA  Raphanus raphanistrum subsp. landra
FD530449       <-- .................................gATGACAAAG-TCAACA  Raphanus raphanistrum subsp. maritimus
FD961316       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD982971       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY893682       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY925544       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY939979       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD965627       --> GGTCAAAAATACGATGCTCACTTTGACTACTTTCATGACAAAG-TC....  Raphanus raphanistrum subsp. maritimus
EY924819       --> GGTCAAAAATACGATGCTCACTTTGACTACTTTCATGACAAAG-TCAACA  Raphanus raphanistrum subsp. landra
EY908120       --> GGTCAAAAATACGATGCTCACTTTGATTACTTCCACGACAAAG-TGAATA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY441680       --> GGTCAAAAATACGATGCTCACTTTGACTACTTCCACGACAAAG-TGAATA  Raphanus sativus cv GSK3-1
FD572268       --> GGTCAAAAATACGATGCTCACTTTGACTACTTTCATGACAAAG-TCAACA  Raphanus sativus cv Early Scarlet Globe
FD974307       --> GGTCAAAAATACGATGCTCACTTTGACTACTTTCATGACAAAG-TGAATA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD535071       --> GGTCAAAAATACGATGCTCACTTTGACTACTTTCATGACCAAGGTCAACA  Raphanus raphanistrum subsp. maritimus
EY900580       --> GGTCAAAAATACGATGCTCACTTTGACTACTTTCATGACAAAG-TCAACA  Raphanus raphanistrum subsp. maritimus
FD534543       --> .................................gATGACAAAG-TCAACA  Raphanus raphanistrum subsp. maritimus
EY897328       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV544364       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY921001       --> ..................................................  Raphanus raphanistrum subsp. landra
EV543761       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               551    -    601
UN10190        --> TTGTCCGTGGTGGACACCGCATAGCAACAGTTCTCATGTATCTATCTAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920428       <-- TTGTCTGTGGTGGACACCGCATAGCAACAGTTCTCATGTATCTATCTAAT  Raphanus raphanistrum subsp. landra
FD950475       <-- TTGTACGTGGTGGACACCGCATAGCAACAGTTCTCATGTATCTATCTAAT  Raphanus sativus cv Rat-Tail Radish #3870
FD575944       <-- TTGTCCGTGGTGGACACCGCATAGCAACAGTTCTCATGTATCTATCTAAT  Raphanus sativus cv Early Scarlet Globe
FD530827       <-- TTGTCCGTGGTGTACACCGCATAGCAACAGTTCTCATGTATCTATCTAAT  Raphanus raphanistrum subsp. maritimus
EY919278       <-- TTGTCCGTGGTGGACACCGCATAGCAACAGTTCTCAT-TATCTATCTAAT  Raphanus raphanistrum subsp. landra
FD530449       <-- TTGTCCGTGGTGGACACCGCATAGCAACAGTTCTCATGTATCTATCTAAT  Raphanus raphanistrum subsp. maritimus
FD961316       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD982971       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY893682       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY925544       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY939979       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD965627       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY924819       --> TTGTCTGTGGTGGACACCGCATAGCAACAGTTCTCATGTATCTATCTAAT  Raphanus raphanistrum subsp. landra
EY908120       --> TTGTACGTGGTGGACACCGCATAGCAACAGTTCTCATGTATCTATCTAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FY441680       --> TTGTACGTGGTGGACACCGCATAGCAACAGTTCTCATGTATCTATCTAAT  Raphanus sativus cv GSK3-1
FD572268       --> TTGTCCGTGGTGGACACCGCATAGCAACAGTTCTCATGTATCTATCTAAT  Raphanus sativus cv Early Scarlet Globe
FD974307       --> TTGTACGTGGTGGACACCGCATAGCAACAGTTCTCATGTATCTCTCTAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD535071       --> TTGTCCGTGGTGTACACCGCATAGCAACAGTTCTCATGTATCTATCTAAT  Raphanus raphanistrum subsp. maritimus
EY900580       --> TTGTCCGTGGTGGACACCGCATAGCAACAGTTCTCATGTATCTATCTAAT  Raphanus raphanistrum subsp. maritimus
FD534543       --> TTGTCCGTGGTGGACACCGCATAGCAACAGTTCTCATGTATCTATCTAAT  Raphanus raphanistrum subsp. maritimus
EY897328       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV544364       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY921001       --> ..................................................  Raphanus raphanistrum subsp. landra
EV543761       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               601    -    651
UN10190        --> GTCACAAGAGGTGGAGAAACCGTCTTCCCCCATGCCGAGATACCTTCTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920428       <-- GTCACAAGAGGTGGAGAAACCGTCTTCCCCCATGCCGAGATACCTTCTCG
FD950475       <-- GTCACAAGAGGTGGAGAAACTGTCTTCCCCCATGCGGAGATACCTTCTCG
FD575944       <-- GTCACAAGAGGTGGAGAAACCGTCTTCCCCCATGCCGAGATACCTTCTCG
FD530827       <-- GTCACAAGAGGTGGAGAAACCGTCTTCCCCCATGCCGAGATACCTTCTCG
EY919278       <-- GTCACAAGAGGTGGAGAAACCGTCTTCCCCCATGCCGAGATACCTTCTCG
FD530449       <-- GTCACAAGAGGTGGAGAAACCGTCTTCCCCCATGCCGAGATACCTTCTCG
FD961316       <-- ...................CCGTCTTCCCCCATGCCGAGATACCTTCTCG
FD982971       <-- ................................................CG
EY893682       <-- ..................................................
EY925544       <-- ..................................................
EY939979       --> ..................................................
FD965627       --> ..................................................
EY924819       --> GTCACAAGAGGTGGAGAAACCGTCTTCCCCCATGCCGAGATACCTTCTCG
EY908120       --> GTCACAAGAGGTGGAGAAACCGTCTTCCCCCATGCAGAGATACCTTCTCG
FY441680       --> GTCACAAGAGGTGGAGAAACCGTCTTCCCCCATGCAGAGATACCTTCTCG
FD572268       --> GTCACAAGAGGTGGAGAAACCGTCTTCCCCCATGCCGAGATACCTTCTCG
FD974307       --> GTCACAAGAGGTGGAGAAACCGTCTTCCCCCATGCAGAGATACCTTCTCG
FD535071       --> GTCACAAGAGGTGGAGAAACCGTCTTCCCCCATGCCGAGATACCTTCTCG
EY900580       --> GTCACAAGAGGTGGAGAAACCGTCTTCCCCCATGCCGAGATACCTTCTCG
FD534543       --> GTCACAAGAGGTGGAGAAACCGTCTTCCCCCATGCCGAGATACCTTCTCG
EY897328       --> ..................................................
EV544364       --> ..................................................
EY921001       --> ..................................................
EV543761       --> ..................................................

               651    -    701
UN10190        --> CCGAGTACTATCTGAGAACCAAGAAGACCTTTCTGATTGTGCCAAGAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920428       <-- CCGAGTACTATTTGAGAACCAAGAAGACCTTTCTGATTGTGCCAAGAAAG
FD950475       <-- CCGAGTACTATCTGAGAACCAAGAAGACCTTTCTGATTGTGCCAAGAAAG
FD575944       <-- CCGAGTACTATTTGAGAACCAAGAAGACCTTTCTGATTGTGCCAAGAAAG
FD530827       <-- CCGAGTACTATCTGAGAACCAAGAAGACCTTTCTGATTGTGCCAAGAAAG
EY919278       <-- CCGAGTACTATCTGAGAACCAAGAAGACCTTTCTGATTGTGCCAAGAAAG
FD530449       <-- CCGAGTACTATCTGAGAACCAAGAAGACCTTTCTGATTGTGCCAAGAAAG
FD961316       <-- CCGAGTACTATCTGAGAACCAAGAAGACCTTTCTGATTGTGCCAAGAAAG
FD982971       <-- CCGAGTACTATCTGAGAACCAAGGATACCTTTCTGATTGTGCCAAGAAAG
EY893682       <-- ..................................................
EY925544       <-- ..................................................
EY939979       --> ..................................................
FD965627       --> ..................................................
EY924819       --> CCGAGTACTATCTGAGAACCAAGAAGACCTTTCTGATTGTGCCAAGAAAG
EY908120       --> CCGAGTACTATCTGAGAAACAAGAAGACCTTTCTGATTGTGCCAAGAAAG
FY441680       --> CCGAGTACTATCTGAGAAACAAGAAGACCTTTCTGATTGTGCCAAGAAAG
FD572268       --> CCGAGTACTATCTGAGAACCAAGAAGACCTTTCTGATTGTGCCAAGAAAG
FD974307       --> CCGAGTACTATCTGAG..................................
FD535071       --> CCGAGTACTATCTGAGAACCAAGAAGACCTTTCTGATTGTGCCAAGAAAG
EY900580       --> CCGAGTACTATCTGAGAACCAAGAAGACCTTTCTGATTGTGCCAAGAAAG
FD534543       --> CCGAGTACTATCTGAGAACCAAGAAGACCTTTCTGATTGTGCCAAGAAAG
EY897328       --> ..................................................
EV544364       --> ..................................................
EY921001       --> ..................................................
EV543761       --> ..................................................

               701    -    751
UN10190        --> GAATCGCCGTGAAACCAAGGAAAGGGGATGCTTTGTTGTTCTTCAACCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920428       <-- GAATCGCCGTGAAACCAAGGAAAGGGGATGCTTTGTTGTTTTTCAACCTC
FD950475       <-- GAATCGCCGTGAAACCAAGGAAAGGGGATGCTTTGTTGTTCTTCAACCTC
FD575944       <-- GAATCGCCGTGAAACCAAGGAAAGGGGATGCTTTGTTGTTTTTCAACCTC
FD530827       <-- GAATCGCCGTGAAACCAAGGAAAGGGGATGCTTTGTTGTTCTTCAACCTC
EY919278       <-- GAATCGCCGTGAAACCAAGGAAAGGGGATGCTTTGTTGTTCTTCAACCTC
FD530449       <-- GAATCGCCGTGAAACCAAGGAAAGGGGATGCTTTGTTGTTCTTCAACCTC
FD961316       <-- GAATCGCCGTGAAACCAAGGAAAGGGGATGCTTTGTTGTTCTTCAACCTC
FD982971       <-- GAATCGCCGTGAAACCAAGGAAAGGGGATGCTTTGTTGTTCTTCAACCTC
EY893682       <-- ..................................................
EY925544       <-- ..................................................
EY939979       --> ..................................................
FD965627       --> ..................................................
EY924819       --> GAATCGCCGTG.......................................
EY908120       --> GAATCGCCGT........................................
FY441680       --> GAATCGCCGTGAAACCAAGGAAAGGGGATGCTTTGTTGTTCTTCAACCTC
FD572268       --> GAATCGCCGTGAAACCAAG-AAAGGGGATGCTTTGTTGTTCTTCAACCTC
FD974307       --> ..................................................
FD535071       --> GAATCGCCGTGAAACCAAGGAAAGGGGATGCTTTGTTGTTCTTCAACCTC
EY900580       --> GAATCGCCGTGAAACCAAGGAAAGGGGATGCTTTGTTGTTCTTCAACCTC
FD534543       --> GAATCGCCGTGAAACCAAGGAAAGGGGATGCTTTGTTGTTCTTCAACCTC
EY897328       --> ..................................................
EV544364       --> ..................................................
EY921001       --> ..................................................
EV543761       --> ..................................................

               751    -    801
UN10190        --> CACCCTGACGCAATCCCTGACCCGTTGAGCCTTCACGGTGGATGCCCCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920428       <-- CACCCTGACGCAATCCCTGACCCGTTGAGCCTTCACGATGGATGCACCGT
FD950475       <-- CACCCTGACGCAATCCCTGACCCGTTGAGCCTTCACGGTGGATGTCCTGT
FD575944       <-- CACCCTGACGCAATCCCTGACCCGTTGAGCCTTCACGGTGGATGCCCCGT
FD530827       <-- CACCCTGACGCAATCCCTGACCCGTTGAGCCTTCACGGTGGATGCCCCGT
EY919278       <-- CACCCTGACGCAATCCCTGACCCGTTGAGCCTTCACGGTGGATGCCCCGT
FD530449       <-- CACCCTGACGCAATCCCTGACCCGTTGAGCCTTCACGGTGGATGCCCCGT
FD961316       <-- CACCCTGACGCAATCCCTGACCCGTTGAGCCTTCACGGTGGATGCCCCGT
FD982971       <-- CACCCTGACGCAATCCCTGACCCGTTGAGCCTTCACGGTGGATGCCCCGT
EY893682       <-- ..................................................
EY925544       <-- ..................................................
EY939979       --> ..................................................
FD965627       --> ..................................................
EY924819       --> ..................................................
EY908120       --> ..................................................
FY441680       --> CACCCTGACGCAATCCCTGACCCATTGAGCCTTCACGGTGGATGTCCTGT
FD572268       --> CACCCTGACGCA-TCCCTGACCCGTTGAGCCTT.................
FD974307       --> ..................................................
FD535071       --> CACCCTGACGCAATCCCTGACCCGTTGAGCCTTCACGGTGGATGCCCCGT
EY900580       --> CACCCTGACGCAATCCCTGACCCGTTGAGCCTTCACGGTGGATGCCCCGT
FD534543       --> CACCCTGACGCAATCCCTGACCCGTTGAGCCTTCACGGTGGATGCCCCGT
EY897328       --> ..................................................
EV544364       --> ..................................................
EY921001       --> ..................................................
EV543761       --> ..................................................

               801    -    851
UN10190        --> GATCGAAGGAGAGAAATGGTCAGCGACCAAGTGGATCCACGTGGACTCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920428       <-- GATCGAAGGAGAGAAATGGTCAGCGACCAAGTGGATCCACGTGGACTCAT
FD950475       <-- GATCGAAGGAGAGAAATGGTCAGCGACCAAGTGGATCCACGTGGACTCAT
FD575944       <-- GATCGAAGGAGAGAAATGGTCAGCGACCAAGTGGATCCACGTGGACTCAT
FD530827       <-- GATCGAAGGAGAGAAATGGTCAGCGACCAAGTGGATCCACGTGGACTCAT
EY919278       <-- GATCGAAGGAGAGAAATGGTCAGCGACCAAGTGGATCCACGTGGACTCAT
FD530449       <-- GATCGAAGGAGAGAAATGGTCAGCGACCAAGTGGATCCACGTGGACTCAT
FD961316       <-- GATCGAAGGAGAGAAATGGTCAGCGACCAAGTGGATCCACGTGGACTCAT
FD982971       <-- GATCGAAGGAGAGAAATGGTCAGCGACCAAGTGGATCCACGTGGACTCAT
EY893682       <-- ...............................gGGATCCACGTGGACTCAT
EY925544       <-- ..................................................
EY939979       --> ..................................................
FD965627       --> ..................................................
EY924819       --> ..................................................
EY908120       --> ..................................................
FY441680       --> GATCGAAGGAGAGAAATGGTCAGCGACCAAGTGGATCCACGTGGACTCAT
FD572268       --> ..................................................
FD974307       --> ..................................................
FD535071       --> GATCGAAGGAGAGAAATGGTCAGCGACCAAGTGGATCCACGTGGACTCAT
EY900580       --> GATCGAACGAGAGAAATGGTCAGCGACCAAGTGGATCCACGTGGACTCAT
FD534543       --> GATCGAAGGAGAGAAATGGTCAGCGACCAAGTGGATCCACGTGGACTCAT
EY897328       --> ...............................gGGATCCACGTGGACTCAT
EV544364       --> ..................................................
EY921001       --> ..................................................
EV543761       --> ..................................................

               851    -    901
UN10190        --> TCGATAAGATTGTGACGCCTGGTGGAAACTGCACTGATATGAACGAGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920428       <-- TCGATAAGATTGTGACGCCTGGTGGAAACTGCACTGATATGAACGAGAGC
FD950475       <-- TCGATAAGATTTTGACGCCTGGTGGAAACTGCACTGATATGAACGAGAGC
FD575944       <-- TCGATAAGATTGTGACGCCTGGTGGAAACTGCACTGATATGAACGAGAGC
FD530827       <-- TCGATAAGATTGTGACGCCTGGTGGAAACTGCACTGATATGAACGAGAGC
EY919278       <-- TCGATAAGATTGTGACGCCTGGTGGAAACTGCACTGATATGAACGAGAGC
FD530449       <-- TCGATAAGATTGTGACGCCTGGTGGAAACTGCACTGATATGAACGAGAGC
FD961316       <-- TCGATAAGATTGTGACGCCTGGTGGAAACTGTACTGATATGAACGAGAGC
FD982971       <-- TCGATAAGATTGTGACGCCTGGTGGAAACTGCACTGATATGAACGAGAGC
EY893682       <-- TCGATAAGATTGTGACGCCTGGTGGAAACTGCACTGATATGAACGAGAGC
EY925544       <-- ..................................................
EY939979       --> ..................................................
FD965627       --> ..................................................
EY924819       --> ..................................................
EY908120       --> ..................................................
FY441680       --> TCGATAAGATTTTGACGCCTGGTGGAAACTGCACTGATATGAACGAGAGC
FD572268       --> ..................................................
FD974307       --> ..................................................
FD535071       --> TCGATAAGATTGTGACGCCTGGTGGAAACTGCACTGATATGAACGA....
EY900580       --> TCGATAAGATTGTGACGCCTGGTG..........................
FD534543       --> TCGATAAGATTGTGACGCCTGGTGGAAACTGCACTGATATGAACGAGAGC
EY897328       --> TCGATAAGATTGTGACGCCTGGTGGAAACTGCACTGATATGAACGAGAGC
EV544364       --> ..................................................
EY921001       --> ..................................................
EV543761       --> ..................................................

               901    -    951
UN10190        --> TGTGAGAGATGGGCGGTCCTTGGGGAATGCACAAAGAATCCAGAGTATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920428       <-- TGTGAGAGATGGGCGGTCCTTGGGGAATGCACAAAGAATCCAGAGTATAT
FD950475       <-- TGTGAGAGATGGGCGGTCCTTGGGGAATGCACAAAGAATCCAGAGTATAT
FD575944       <-- TGTGAGAGATGGGCGGTCCTTGGGGAATGCACAAAGAATCCAGAGTATAT
FD530827       <-- TGTGAGAGATGGGCGGTCCTTGGGGAATGCACAAAGAATCCAGAGTATAT
EY919278       <-- TGTGAGAGATGGGCGGTCCTTGGGGAATGCACAAAGAATCCAGAGTATAT
FD530449       <-- TGTGAGAGATGGGCGGTCCTTGGGGAATGCACAAAGAATCCAGAGTATAT
FD961316       <-- TGTGAGAGATGGGCGGTCCTTGGGGAATGCACAAAGAATCCAGAGTACAT
FD982971       <-- TGTGAGAGATGGGCGGTCCTTGGGGAATGCACAAAGAATCCAGAGTATAT
EY893682       <-- TGTGAGAGATGGGCGGTCCTTGGGGAATGCACAAAGAATCCAGAGTATAT
EY925544       <-- ..................................................
EY939979       --> ..................................................
FD965627       --> ..................................................
EY924819       --> ..................................................
EY908120       --> ..................................................
FY441680       --> TGTGAGAGATGGGCAGTGCTTGGGGAATGCACAAAGAATCCAGAGTATAT
FD572268       --> ..................................................
FD974307       --> ..................................................
FD535071       --> ..................................................
EY900580       --> ..................................................
FD534543       --> TGTGAGAGATGGGCGGTCCTTGGGGAATGCACAAAGAATCCAGAGTATAT
EY897328       --> TGTGAGAGATGGGCGGTCCTTGGGGAATGCACAAAGAATCCAGAGTATAT
EV544364       --> ..................................................
EY921001       --> ..................................................
EV543761       --> ..................................................

               951    -   1001
UN10190        --> GGTTGGTTCTGCTGAGCTTCCTGGCTATTGCAGGCGTAGCTGTAAGGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920428       <-- GGTTGGTTCTGCTGAGCTTCCTGGCTATTGCAGGCGTAGCTGTAAGGCTT
FD950475       <-- GGTTGGTTCTGCTGAGCTTCCTGGCTATTGCAGGCGTAGCTGTAAGGCTT
FD575944       <-- GGTTGGTTCTGCTGAGCTTCCTGGCTATTGCAGGCGTAGCTGTAAGGCTT
FD530827       <-- GGTTGGTTCTGCTGAGCTTCCTGGCTATTGCAGGCGTAGCTGTAAGGCTT
EY919278       <-- GGTTGGTTCTGCTGAGCTTCCTGGCTATTGCAGGCGTAGCTGTAAGGCTT
FD530449       <-- GGTCGGTTCTGCTGAGCTTCCTGGCTATTGCAGGCGTAGCTGTAAGGCTT
FD961316       <-- GGTTGGTTCTGCTGAGCTTCCTGGCTATTGCAGGCGTAGCTGTAAGGCTT
FD982971       <-- GGTTGGTTCTGCTGAGCTTCCTGGCTATTGCAGGCGTAGCTGTAAGGCTT
EY893682       <-- GGTTGGTTCTGCTGAGCTTCCTGGCTATTGCAGGCGTAGCTGTAAGGCTT
EY925544       <-- ..................................................
EY939979       --> ..................................................
FD965627       --> ..................................................
EY924819       --> ..................................................
EY908120       --> ..................................................
FY441680       --> GGTTGGTTCTGCTG....................................
FD572268       --> ..................................................
FD974307       --> ..................................................
FD535071       --> ..................................................
EY900580       --> ..................................................
FD534543       --> GGTCGGTTCTGCTGAGCTTCCTGGCTATTGCAGGCGTAGCTGTAAGGCTT
EY897328       --> GGTTGGTTCTGCTGAGCTTCCTGGCTATTGCAGGCGTAGCTGTAAGGCTT
EV544364       --> ..................................................
EY921001       --> ..................................................
EV543761       --> ..................................................

               1001   -   1051
UN10190        --> GCTAGACTATACTCTAGTCTACCCTCTTCTAGAACTCTATGTTGATGTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920428       <-- GCTAGACTATACTCTAGTCTACCCTCTTCTAGAACTCTATGTTGATGTCT
FD950475       <-- GCTAGACTATACTCTAGTCTACCCTCTTCTAGAACTCTATGTTGATGTCT
FD575944       <-- GCTAGACTATACTCTAGTCTACCCTCTTCTAGAACTCTATGTTGATGTCT
FD530827       <-- GCTAGACTATACTCTAGTCTACCCTCTTCTAGAACTCTATGTTGATGTCT
EY919278       <-- GCTAGACTATACTCTAGTCTACCCTCTTCTAGAACTCTATGTTGATGTCT
FD530449       <-- GCTAGACTATACTCTAGTCTACCCTCTTCTAGAACTCTATGTTGATGTCT
FD961316       <-- GCTAGACTATACTCTAGTCTACCCTCTTCTAGAACTCTATGTTGATGTCT
FD982971       <-- GCTAGACTATACTCTAGTCTACCCTCTTCTAGAACTCTATGTTGATGTCT
EY893682       <-- GCTAGACTATACTCTAGTCTACCCTCTTCTAGAACTCTATGTTGATGTCT
EY925544       <-- ..................................................
EY939979       --> ..................................................
FD965627       --> ..................................................
EY924819       --> ..................................................
EY908120       --> ..................................................
FY441680       --> ..................................................
FD572268       --> ..................................................
FD974307       --> ..................................................
FD535071       --> ..................................................
EY900580       --> ..................................................
FD534543       --> GCTAGACTATACTCTAGTCTACCCTCTTCTAGAACTCTATGTTGATGTCT
EY897328       --> GCTAGACTATACTCTAGTCTACCCTCTTCTAGAACTCTATGTTGATGTCT
EV544364       --> ..................................................
EY921001       --> ..................................................
EV543761       --> ..................................................

               1051   -   1101
UN10190        --> GTTGTAGAGTTGTTATCGTTGGTTAATCTTTTTCTAACTTGAATATGTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920428       <-- GTTGTAGAGTTGTTATCGTTGGTTAATCTTTTTCTAACTTGAATATGTAA
FD950475       <-- GTTGTAGAGTTGTTATCGTTGGTTAATCTTTTTCTAACTTGAATATGTAA
FD575944       <-- GTTGTAGAGTTGTTATCGTTGGTTAATCTTTTTCTAACTTGAATATGTAA
FD530827       <-- GTTGTAGAGTTGTTATCGTTGGTTAATCTTTTTCTAACTTGAATATGTAA
EY919278       <-- GTTGTAGAGTTGTTATCGTTGGTTAATCTTTTTCTAACTTGAATATGTAA
FD530449       <-- GTTGTAGAGTTGTTATCGTTGGTTAATCTTTTTCTAACTTGAATATGTAA
FD961316       <-- GTTGTAGAGTTGTTATCGTTGGTTAATCTTTTTCTAACTTGAATATGTAA
FD982971       <-- GTTGTAGAGTTGTTATCGTTGGTTAATCTTTTTCTAACTTGAATATGTAA
EY893682       <-- GTTGTAGAGTTGTTATCGTTGGTTAATCTTTTTCTAACTTGAATATGTAA
EY925544       <-- ..................................................
EY939979       --> ..................................................
FD965627       --> ..................................................
EY924819       --> ..................................................
EY908120       --> ..................................................
FY441680       --> ..................................................
FD572268       --> ..................................................
FD974307       --> ..................................................
FD535071       --> ..................................................
EY900580       --> ..................................................
FD534543       --> GTTGTAGAGTTGTTATCGTTGGTTAATCTTTTTCTAACTTGAATATGTAA
EY897328       --> GTTGTAGAGTTGTTATCGTTGGTTAATCTTTTTCTAACTTGAATATGTAA
EV544364       --> ..................................................
EY921001       --> ..................................................
EV543761       --> ..................................................

               1101   -   1151
UN10190        --> AACTACAAAAGTTCTCTGGAGAGAATAATATATAAACACATATATAGACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920428       <-- AACTACAAAAGTTCTCTGGAGAGAATAATATATAAACACATATATAGACT
FD950475       <-- AACTACAAAAGTTCTCTGGAGAGAATAATATATAAACACATATATAGACT
FD575944       <-- AACTACAAAAGTTCTCTGGAGAGAATAATATATAAACACATATATAGACT
FD530827       <-- AACTACAAAAGTTCTCTGGAGAGAATAATATATAAACACATATATAGACT
EY919278       <-- AACTACAAAAGTTCTCTGGAGAGAATAATATATAAACACATATATAGACT
FD530449       <-- AACTACAAAAGTTCTCTGGAGAGAATAATATATAAACACATATA......
FD961316       <-- AACTACAAAAGTTCTCTGGAGAGAATAATATATAAACACATATATAGACT
FD982971       <-- AACTACAAAAGTTCTCTGGAGAGAATAATATATAAACACATATAT.....
EY893682       <-- AACTACAAAAGTTCTCTGGAGAGAATAATATATAAACACATATATAGACT
EY925544       <-- ..................................................
EY939979       --> ..................................................
FD965627       --> ..................................................
EY924819       --> ..................................................
EY908120       --> ..................................................
FY441680       --> ..................................................
FD572268       --> ..................................................
FD974307       --> ..................................................
FD535071       --> ..................................................
EY900580       --> ..................................................
FD534543       --> AACTACAAAAGTTCTCTGGAGAGAATAATATATAAACACATATA......
EY897328       --> AACTACAAAAGTTCTCTGGAGAGAATAATATATAAACACATATATAGACT
EV544364       --> ...............................ATAAACACATATATAGACT
EY921001       --> .................................AAACACATATATAGACT
EV543761       --> ..................................................

               1151   -   1201
UN10190        --> TATATATTGAATAGTAACGCAAGAAAGTGCACGGCATCGGTAACAAAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920428       <-- T.................................................
FD950475       <-- TATATATTGAATAGTAACGC..............................
FD575944       <-- TATATATTGAATAGTAACGCAAGAAAGTGCACGGCAcc............
FD530827       <-- TATATATTGAATAGTAACGC..............................
EY919278       <-- T.................................................
FD530449       <-- ..................................................
FD961316       <-- TATATATTGAATAGTAACGC..............................
FD982971       <-- ..................................................
EY893682       <-- TATATATTGAATAGT...................................
EY925544       <-- ..................................................
EY939979       --> ..................................................
FD965627       --> ..................................................
EY924819       --> ..................................................
EY908120       --> ..................................................
FY441680       --> ..................................................
FD572268       --> ..................................................
FD974307       --> ..................................................
FD535071       --> ..................................................
EY900580       --> ..................................................
FD534543       --> ..................................................
EY897328       --> TATATATTGAATAGT...................................
EV544364       --> TATATATTGAATAGTAACGCAAGAAAGTGCACGGCATCGGTAACAAAAAT
EY921001       --> TATATATTGAATAGTAACGCAAGAAAGTGCACGGCATCAGTAACAAAAAT
EV543761       --> ..................................................

               1201   -   1251
UN10190        --> CTCTACGTATATCTATTCAGAGCATTGGTCATATCTTTTACAGGTTGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920428       <-- ..................................................
FD950475       <-- ..................................................
FD575944       <-- ..................................................
FD530827       <-- ..................................................
EY919278       <-- ..................................................
FD530449       <-- ..................................................
FD961316       <-- ..................................................
FD982971       <-- ..................................................
EY893682       <-- ..................................................
EY925544       <-- ..................................................
EY939979       --> ..................................................
FD965627       --> ..................................................
EY924819       --> ..................................................
EY908120       --> ..................................................
FY441680       --> ..................................................
FD572268       --> ..................................................
FD974307       --> ..................................................
FD535071       --> ..................................................
EY900580       --> ..................................................
FD534543       --> ..................................................
EY897328       --> ..................................................
EV544364       --> CTCTACGTATATCTATTCAGAGCATTGGTCATATCTTTTACAGGTTGTGT
EY921001       --> CTCTACGTATATCTATTCAGAGCATTGGTCATATCTTTTACAGGTTGTGT
EV543761       --> ..................................................

               1251   -   1301
UN10190        --> GATCCATTTCTTCCTTCTGAGCGTTCTGCTTGGTGGTGTGATCCATTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920428       <-- ..................................................
FD950475       <-- ..................................................
FD575944       <-- ..................................................
FD530827       <-- ..................................................
EY919278       <-- ..................................................
FD530449       <-- ..................................................
FD961316       <-- ..................................................
FD982971       <-- ..................................................
EY893682       <-- ..................................................
EY925544       <-- ..................................................
EY939979       --> ..................................................
FD965627       --> ..................................................
EY924819       --> ..................................................
EY908120       --> ..................................................
FY441680       --> ..................................................
FD572268       --> ..................................................
FD974307       --> ..................................................
FD535071       --> ..................................................
EY900580       --> ..................................................
FD534543       --> ..................................................
EY897328       --> ..................................................
EV544364       --> GATCCATTTCTTCCTTCTGAGCGTTCTGCTTGGTGGTGTGATCCATTTCT
EY921001       --> GATCCATTTCTTCCTTCTGAGCGTTCTGCTTGGTGGTGTGATCCATTTCT
EV543761       --> ........................................ATCCATTTCT

               1301   -   1351
UN10190        --> TCCTTCTGAGCGTTCCGTTAGGTGGTGTGATCCATTTGTTCATTTGTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920428       <-- ..................................................
FD950475       <-- ..................................................
FD575944       <-- ..................................................
FD530827       <-- ..................................................
EY919278       <-- ..................................................
FD530449       <-- ..................................................
FD961316       <-- ..................................................
FD982971       <-- ..................................................
EY893682       <-- ..................................................
EY925544       <-- ................................CATTTGTTCATTTGTTCT
EY939979       --> ..................................................
FD965627       --> ..................................................
EY924819       --> ..................................................
EY908120       --> ..................................................
FY441680       --> ..................................................
FD572268       --> ..................................................
FD974307       --> ..................................................
FD535071       --> ..................................................
EY900580       --> ..................................................
FD534543       --> ..................................................
EY897328       --> ..................................................
EV544364       --> TCCTTCTGAGCGTTCCGTTAGGTGGTGTGATCCATTTGTTCATTTGTTCT
EY921001       --> TCCTTCTGAGCGTTCCGTTAGGTGGTGTGATCCATTTGTTCATTTGTTCT
EV543761       --> TCCTTCTGAGCGTTCCGTTAGGTGGTGTGATCCATTTGTTCATTTGTTCT

               1351   -   1401
UN10190        --> TCAAAGCTTCCTATGACAGCAGATTGTCTCTTGTCATTGAGCTTTGAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920428       <-- ..................................................
FD950475       <-- ..................................................
FD575944       <-- ..................................................
FD530827       <-- ..................................................
EY919278       <-- ..................................................
FD530449       <-- ..................................................
FD961316       <-- ..................................................
FD982971       <-- ..................................................
EY893682       <-- ..................................................
EY925544       <-- TCAAAGCTTCCTATGACAGCAGATTGTCTCTTGTCATTGAGCTTTGAAGC
EY939979       --> ..................................................
FD965627       --> ..................................................
EY924819       --> ..................................................
EY908120       --> ..................................................
FY441680       --> ..................................................
FD572268       --> ..................................................
FD974307       --> ..................................................
FD535071       --> ..................................................
EY900580       --> ..................................................
FD534543       --> ..................................................
EY897328       --> ..................................................
EV544364       --> TCAAAGCTTCCCATGACAGCAGATTGTCTCTTGTCATTGAGCTTTGAAGT
EY921001       --> TCAAAGCTTCCTATGACAGCAGATTGTCTCTTGTCATTGAGCTTTGAAGC
EV543761       --> TCAAAGCTTCCCATGACAGCAGATTGTCTCTTGTCATTGAGCTTTGAAGT

               1401   -   1451
UN10190        --> GAAACTCTCATAGCAGCCTCTTGAATCGATGCTTTCAAGTATCTGTACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920428       <-- ..................................................
FD950475       <-- ..................................................
FD575944       <-- ..................................................
FD530827       <-- ..................................................
EY919278       <-- ..................................................
FD530449       <-- ..................................................
FD961316       <-- ..................................................
FD982971       <-- ..................................................
EY893682       <-- ..................................................
EY925544       <-- GAAACTCTCATAGCAGCCTCTTGAATCGATGCTTTCAAGTATCTGTACTC
EY939979       --> ..................................................
FD965627       --> ..................................................
EY924819       --> ..................................................
EY908120       --> ..................................................
FY441680       --> ..................................................
FD572268       --> ..................................................
FD974307       --> ..................................................
FD535071       --> ..................................................
EY900580       --> ..................................................
FD534543       --> ..................................................
EY897328       --> ..................................................
EV544364       --> GAAACTCTCATAGCAGCCTCTTGAATCGATACTTTCAAGTATCTGTACTC
EY921001       --> GAAACTCTCATAGCAGCCTCTTGAATCGATGCTTTCAAGTATCTGTACTC
EV543761       --> GAAACTCTCATAGCAGCCTCTTGAATCGATACTTTCAAGTATCTGTACTC

               1451   -   1501
UN10190        --> GTCTTCCATGCAGTTTATCAATCACTATTTGACCGTCTCTTGATTCATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920428       <-- ..................................................
FD950475       <-- ..................................................
FD575944       <-- ..................................................
FD530827       <-- ..................................................
EY919278       <-- ..................................................
FD530449       <-- ..................................................
FD961316       <-- ..................................................
FD982971       <-- ..................................................
EY893682       <-- ..................................................
EY925544       <-- GTCTTCCATGCAGTTTATCAATCACTATTTGACCGTCTCTTGATTCATAA
EY939979       --> ..................................................
FD965627       --> ..................................................
EY924819       --> ..................................................
EY908120       --> ..................................................
FY441680       --> ..................................................
FD572268       --> ..................................................
FD974307       --> ..................................................
FD535071       --> ..................................................
EY900580       --> ..................................................
FD534543       --> ..................................................
EY897328       --> ..................................................
EV544364       --> GTCTTCCATGCAGTTTATCAATCACTATTTGACCGTCTCTTGATTCATAA
EY921001       --> GTCTTCCATGCAGTTTATCAATCACTATTTGACCGTCTCTTGATTCATAA
EV543761       --> GTCTTCCATGCAGTTTATCAATCACTATTTGACCGTCTCTTGATTCATAA

               1501   -   1551
UN10190        --> CCTTGGGCGATCACTTTGACTTGCTCATCTCGTAGTTTTGGCTTCAACGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920428       <-- ..................................................
FD950475       <-- ..................................................
FD575944       <-- ..................................................
FD530827       <-- ..................................................
EY919278       <-- ..................................................
FD530449       <-- ..................................................
FD961316       <-- ..................................................
FD982971       <-- ..................................................
EY893682       <-- ..................................................
EY925544       <-- CCTTGGGCGATCACTTTGACTTGCTCATCTCGTAGTTTTGGCTTCAACGC
EY939979       --> ..................................................
FD965627       --> ..................................................
EY924819       --> ..................................................
EY908120       --> ..................................................
FY441680       --> ..................................................
FD572268       --> ..................................................
FD974307       --> ..................................................
FD535071       --> ..................................................
EY900580       --> ..................................................
FD534543       --> ..................................................
EY897328       --> ..................................................
EV544364       --> CCTTGGGCGATCACTTTGACTTGCTCATCTCGTAGTTTTGGCTTCAACGC
EY921001       --> CCTTGGGCGATCACTTTGACTTGCTCATCTCGTAGTTTTGGCTTCAACGC
EV543761       --> CCTTGGGCGATCACTTTGACTTGCTCATCTCGTAGTTTTGGCTTCAACGC

               1551   -   1601
UN10190        --> AGCATGGTCTCCTCCCAAGAACAATGCTCCAAGGACCTCTCCTAAGAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920428       <-- ..................................................
FD950475       <-- ..................................................
FD575944       <-- ..................................................
FD530827       <-- ..................................................
EY919278       <-- ..................................................
FD530449       <-- ..................................................
FD961316       <-- ..................................................
FD982971       <-- ..................................................
EY893682       <-- ..................................................
EY925544       <-- AGCATGGTCTCCTCCCAAGAACAATGCTCCAAGAACCTCTCCTAAGAACA
EY939979       --> ..................................................
FD965627       --> ..................................................
EY924819       --> ..................................................
EY908120       --> ..................................................
FY441680       --> ..................................................
FD572268       --> ..................................................
FD974307       --> ..................................................
FD535071       --> ..................................................
EY900580       --> ..................................................
FD534543       --> ..................................................
EY897328       --> ..................................................
EV544364       --> AGCATGGTCTCCTCCCAAGAACAATGCTCCAAGGACCTCTCCTAAGAACA
EY921001       --> AGCATGGTCTCCTCCCAAGAACAATGCTCCAAGAACCTCTCCTAAGAACA
EV543761       --> AGCATGGTCTCCTCCCAAGAACAATGCTCCAAGGACCTCTCCTAAGAACA

               1601   -   1651
UN10190        --> TTCCCACATGCTTGTAGCTCCTGTGATCCTGATGAAGGGCGTGTAGTCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920428       <-- ..................................................
FD950475       <-- ..................................................
FD575944       <-- ..................................................
FD530827       <-- ..................................................
EY919278       <-- ..................................................
FD530449       <-- ..................................................
FD961316       <-- ..................................................
FD982971       <-- ..................................................
EY893682       <-- ..................................................
EY925544       <-- TTCCCACATGCTTGTAGCTCCTGTGATCCTGATGAAGGGCGTGTAGTCTA
EY939979       --> ..................................................
FD965627       --> ..................................................
EY924819       --> ..................................................
EY908120       --> ..................................................
FY441680       --> ..................................................
FD572268       --> ..................................................
FD974307       --> ..................................................
FD535071       --> ..................................................
EY900580       --> ..................................................
FD534543       --> ..................................................
EY897328       --> ..................................................
EV544364       --> TTCCCACATGCTTGTAGCTCCTGTGATCCTGATGAAGGGCGTGTAGTCTA
EY921001       --> TTCCCACATGCTTGTAGCTCCTGTGATCCTGATGAAGGGCGTGTAGTCTA
EV543761       --> TTCCCACATGCTTGTAGCTCCTGTGATCCTGATGAAGGGCGTGTAGTCTA

               1651   -   1701
UN10190        --> GCGAGCAACCGGTGCACAAACTGAGATTCAGGTGTTTGAACCGTAGAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920428       <-- ..................................................
FD950475       <-- ..................................................
FD575944       <-- ..................................................
FD530827       <-- ..................................................
EY919278       <-- ..................................................
FD530449       <-- ..................................................
FD961316       <-- ..................................................
FD982971       <-- ..................................................
EY893682       <-- ..................................................
EY925544       <-- GCGAGCAACCGGTGCACAAACTGAGATTCAGGTGTTTGAACCGTAGAGTT
EY939979       --> ..................................................
FD965627       --> ..................................................
EY924819       --> ..................................................
EY908120       --> ..................................................
FY441680       --> ..................................................
FD572268       --> ..................................................
FD974307       --> ..................................................
FD535071       --> ..................................................
EY900580       --> ..................................................
FD534543       --> ..................................................
EY897328       --> ..................................................
EV544364       --> GCGAGCAACCGGTGCACAAAATGAGATTCAGGTGTTTGAACCGTAGAGTT
EY921001       --> GCGAGCAACCGGTGCACAAACTGAGATTCAGGTGTTTGAACCG.......
EV543761       --> GCGAGCAACCGGTGCACAAAATGAGATTCAGGTGTTTGAACCGTAGAGTT

               1701   -   1751
UN10190        --> GAGACTGTTGAGCATCATCTGGAAAGAAGTCAAGTTGCGTTGGGTGGCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920428       <-- ..................................................
FD950475       <-- ..................................................
FD575944       <-- ..................................................
FD530827       <-- ..................................................
EY919278       <-- ..................................................
FD530449       <-- ..................................................
FD961316       <-- ..................................................
FD982971       <-- ..................................................
EY893682       <-- ..................................................
EY925544       <-- GAGACTGTTGAGCA---TCTGGAAAGAAGTCAAGTTGCGTTGGGTGGCTA
EY939979       --> ..................................................
FD965627       --> ..................................................
EY924819       --> ..................................................
EY908120       --> ..................................................
FY441680       --> ..................................................
FD572268       --> ..................................................
FD974307       --> ..................................................
FD535071       --> ..................................................
EY900580       --> ..................................................
FD534543       --> ..................................................
EY897328       --> ..................................................
EV544364       --> GAGACTGTTGAGCATCATCTGGAAAGAAGTCAAGTTGCGTTGGGTGGCTA
EY921001       --> ..................................................
EV543761       --> GAGACTGTTGAGCATCATCTGGAAAGAAGTCAAGTTGCGTTGGGTGGCTA

               1751   -   1801
UN10190        --> GAGGGATGAGTGTGATGTTTAGACCGGATTCGAGAGCAGTCTTTGCTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920428       <-- ..................................................
FD950475       <-- ..................................................
FD575944       <-- ..................................................
FD530827       <-- ..................................................
EY919278       <-- ..................................................
FD530449       <-- ..................................................
FD961316       <-- ..................................................
FD982971       <-- ..................................................
EY893682       <-- ..................................................
EY925544       <-- GAGGGATGAGTGTGATGTTTAGACCGGATTCGAGAACAGTCTTTGCTGCT
EY939979       --> ..................................................
FD965627       --> ..................................................
EY924819       --> ..................................................
EY908120       --> ..................................................
FY441680       --> ..................................................
FD572268       --> ..................................................
FD974307       --> ..................................................
FD535071       --> ..................................................
EY900580       --> ..................................................
FD534543       --> ..................................................
EY897328       --> ..................................................
EV544364       --> GAGGGATGAGTGTGATGTTTAGACCGGATTCGAGAGCAGTCTTTGCTGCT
EY921001       --> ..................................................
EV543761       --> GAGGGATGAGTGTGATGTTTAGACCGGATTCGAGAGCAGTCTTTGCTGCT

               1801   -   1851
UN10190        --> AAAGGATCAAGAAACATATTGAACTCGGCGAATGCATTAGAAGGAACCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY920428       <-- ..................................................
FD950475       <-- ..................................................
FD575944       <-- ..................................................
FD530827       <-- ..................................................
EY919278       <-- ..................................................
FD530449       <-- ..................................................
FD961316       <-- ..................................................
FD982971       <-- ..................................................
EY893682       <-- ..................................................
EY925544       <-- AAAGGATCAAGAAACATATTGAACTCGGCGAATGCATTAGAAGGAACCGT
EY939979       --> ..................................................
FD965627       --> ..................................................
EY924819       --> ..................................................
EY908120       --> ..................................................
FY441680       --> ..................................................
FD572268       --> ..................................................
FD974307       --> ..................................................
FD535071       --> ..................................................
EY900580       --> ..................................................
FD534543       --> ..................................................
EY897328       --> ..................................................
EV544364       --> AAAGGATCA.........................................
EY921001       --> ..................................................
EV543761       --> AAAGGATCAA........................................

               1851   -   1901
UN10190        --> GAATGTGTTCCCTTTGTCC
                   ~~~~~~~~~~~~~~~~~~~
EY920428       <-- ...................
FD950475       <-- ...................
FD575944       <-- ...................
FD530827       <-- ...................
EY919278       <-- ...................
FD530449       <-- ...................
FD961316       <-- ...................
FD982971       <-- ...................
EY893682       <-- ...................
EY925544       <-- GAATGTGTTCCCTTTGTCC
EY939979       --> ...................
FD965627       --> ...................
EY924819       --> ...................
EY908120       --> ...................
FY441680       --> ...................
FD572268       --> ...................
FD974307       --> ...................
FD535071       --> ...................
EY900580       --> ...................
FD534543       --> ...................
EY897328       --> ...................
EV544364       --> ...................
EY921001       --> ...................
EV543761       --> ...................