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Alignment for radish unigene UN10249

               1      -     51
UN10249        --> GGAGCCTTCACCC-ACCACACAAACACAATCGCCTCTTGTAGAATTCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530372       <-- GGAACCTTCACCCCACCACACAAACACAATCGCCTCTTGTAGAATTCTCC
EY920097       <-- ..................................................
EV547451       <-- ..................................................
EY918543       <-- ..................................................
EY918354       <-- ..................................................
FD961408       <-- ..................................................
EV525698       --> GGAACCTTCACCC-ACCACACAAACACAATCGCCTCTTGTAGAATTCTCC
EV552554       --> GGAACCTTCACCC-ACCACACAAACACAATCGCCTCTTGTAGAATTCTCC
EX770291       --> GGAACCTTCACCC-ACCACACAAACACAATCGCCTCTTGTAGAATTCTCC
EX772248       --> GGAGCCTTCACCC-ACCACACAAACACAATCGCCTCTTGTAGAATTCTCC
EY922382       --> GGAACCTTCACCC-ACCACACAAACACAATCGCCTCTTGTAGAATTCTCC
EY922609       --> GGAACCTTCACCC-ACCACACAAACACAATCGCCTCTTGTAGAATTCTCC
EY924448       --> GGAACCTTCACCC-ACCACACAAACACAATCGCCTCTTGTAGAATTCTCC
EY924709       --> GGAACCTTCACCC-ACCACACAAACACAATCGCCTCTTGTAGAATTCTCC
FD965751       --> GGAACCTTCACCC-ACCACACAAACACAATCGCCTCTTGTAGAATTCTCC

               51     -    101
UN10249        --> TCCCCAGATAAAAAAAAAAA--TCAAAGCCCTCAAATTGTCATCGATCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530372       <-- TCCCCAGATAAAAAAAAAAAAATCAAAGCCCTCAAATTGTCATCGATCAG
EY920097       <-- ..................................................
EV547451       <-- ..................................................
EY918543       <-- ..................................................
EY918354       <-- ..................................................
FD961408       <-- ..................................................
EV525698       --> TCCCCAGATAAAAAAAAAAA-ATCAAAGCCCTCAAATTGTCATCGATCAG
EV552554       --> TCCCCAGATAAAAAAAAAAA--TCAAAGCCCTCAAATTGTCATCGATCAG
EX770291       --> TCCCCAGATAAAAAAAAA----TC-AATCCCTCAAATTGTCATCGATCAG
EX772248       --> TCCCCAGATAAAAAAAAAAA-ATCAAT-CCCTCAAATTGTCATCGATCAG
EY922382       --> TCCCCAGATAAAAAAAAAA---TCAAAGCCCTCAAATTGTCATCGATCAG
EY922609       --> TCCCCAGATAAAAAAAAAAA-ATCAAAGCCCTCAAATTGTCATCGATCAG
EY924448       --> TCCCCAGATAAAAAAAAA----TC-AATCCCTCAAATTGTCATCGATCAG
EY924709       --> TCCCCAGATAAAAAAAAA----TC-AATCCCTCAAATTGTCATCGATCAG
FD965751       --> TCCCCAGATAAAAAAAAAAA--TCAAAGCCCTCAAATTGTCATCGATCAG

               101    -    151
UN10249        --> TCAATGGAAGAAGCTAAAGTGGAAGCAAAAGACGGAACCATCTCCGTTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530372       <-- TCAATGGAAGAAGCTAAAGTGGAAGCAAAAGACGGAACCATCTCCGTTGC
EY920097       <-- ..................................................
EV547451       <-- ..................................................
EY918543       <-- ..................................................
EY918354       <-- ..................................................
FD961408       <-- ..................................................
EV525698       --> TCAATGGAAGAAGCTAAAGTGGAAGCAAAAGACGGAACCATCTCCGTTGC
EV552554       --> TCAATGGAAGAAGCTAAAGTGGAAGCAAAAGACGGAACCATCTCCGTTGC
EX770291       --> TCAATGGAAGAAGCTAAAGTGGAAGCAAAAGACGGAACCATCTCCGTTGC
EX772248       --> TCAATGGAAGAAGCTAAAGTGGAAGCAAAAGACGGAACCATCTCCGTTGC
EY922382       --> TCAATGGAAGAAGCTAAAGTGGAAGCAAAAGACGGAACCATCTCCGTTGC
EY922609       --> TCAATGGAAGAAGCTAAAGTGGAAGCAAAAGACGGAACCATCTCCGTTGC
EY924448       --> TCAATGGAAGAAGCTAAAGTGGAAGCAAAAGACGGAACCATCTCCGTTGC
EY924709       --> TCAATGGAAGAAGCTAAAGTGGAAGCAAAAGACGGAACCATCTCCGTTGC
FD965751       --> TCAATGGAAGAAGCTAAAGTGGAAGCAAAAGACGGAACCATCTCCGTTGC

               151    -    201
UN10249        --> TACTGCATTCGCCGGTCACCAGCAAGCTGTGCAAGACAGTGACCACAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530372       <-- TACTGCATTCGCCGGTCACCAGCAAGCTGTGCAAGACAGTGACCACAAGT
EY920097       <-- .aaTGCATTCGCCGGTCACCAGCAAGCTGTGCAAGACAGTGACCACAAGT
EV547451       <-- ....GCATTCGCCGGTCACCAGCAAGCTGTGCAAGACAGTGACCACAAGT
EY918543       <-- .......TTCGCCGGTCACCAGCAAGCTGTGCAAGACAGTGACCACAAGT
EY918354       <-- ..........................CTGTGCAAGACAGTGACCACAAGT
FD961408       <-- ..................................................
EV525698       --> TACTGCATTCGCCGGTCACCAGCAAGCTGTGCAAGACAGTGACCACAAGT
EV552554       --> TACTGCATTCGCCGGTCACCAGCAAGCTGTGCAAGACAGTGACCACAAGT
EX770291       --> TACTGCATTCGCCGGTCACCAGCAAGCTGTGCAAGACAGTGACCACAAGT
EX772248       --> TACTGCATTCGCCGGTCACCAGCAAGCTGTGCAAGACAGTGACCACAAGT
EY922382       --> TACTGCATTCGCCGGTCACCAGCAAGCTGTGCAAGACAGTGACCACAAGT
EY922609       --> TACTGCATTCGCCGGTCACCAGCAAGCTGTGCAAGACAGTGACCACAAGT
EY924448       --> TAATGCATTCGCCGGTCACCAGCAAGCTGTGCAAGACAGTGACCACAAGT
EY924709       --> TAATGCATTCGCCGGTCACCAGCAAGCTGTGCAAGACAGTGACCACAAGT
FD965751       --> TACTGCATTCGCCGGTCACCAGCAAGCTGTGCAAGACAGTGACCACAAGT

               201    -    251
UN10249        --> TCCTAACCCAAGCTGTTGAAGAAGCTTACAAGGGTGTTGACTGTGGTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530372       <-- TCCTAACCCAAGCTGTTGAAGAAGCTTACAAGGGTGTTGACTGTGGTGAT
EY920097       <-- TCCTAACCCAAGCTGTTGAAGAAGCTTACAAGGGTGTTGACTGTGGTGAT
EV547451       <-- TCCTAACCCAAGCTGTTGAAGAAGCTTACAAGGGTGTTGACTGTGGTGAT
EY918543       <-- TCCTAACCCAAGCTGTTGAAGAAGCTTACAAGGGTGTTGACTGTGGTGAT
EY918354       <-- TCCTAACCCAAGCTGTTGAAGAAGCTTACAAGGGTGTTGACTGTGGTGAT
FD961408       <-- ..................................................
EV525698       --> TCCTAACCCAAGCTGTTGAAGAAGCTTACAAGGGTGTTGACTGTGGTGAT
EV552554       --> TCCTAACCCAAGCTGTTGAAGAAGCTTACAAGGGTGTTGACTGTGGTGAT
EX770291       --> TCCTAACCCAAGCTGTTGAAGAAGCTTACAAGGGTGTTGACTGTGGTGAT
EX772248       --> TCCTAACCCAAGCTGTTGAAGAAGCTTACAAGGGTGTTGACTGTGGTGAT
EY922382       --> TCCTAACCCAAGCTGTTGAAGAAGCTTACAAGGGTGTTGACTGTGGTGAT
EY922609       --> TCCTAACCCAAGCTGTTGAAGAAGCTTACAAGGGTGTTGACTGTGGTGAT
EY924448       --> TCCTAACCCAAGCTGTTGAAGAAGCTTACAAGGGTGTTGACTGTGGTGAT
EY924709       --> TCCTAACCCAAGCTGTTGAAGAAGCTTACAAGGGTGTTGACTGTGGTGAT
FD965751       --> TCCTAACCCAAGCTGTTGAAGAAGCTTACAAGGGTGTTGACTGTGGTGAT

               251    -    301
UN10249        --> GGTGGCCCTTTTGGTGCTGTTATTGTCCACAATAACCAGGTCGTCGCTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530372       <-- GGTGGCCCTTTTGGTGCTGTTATTGTCCACAATAACCAGGTCGTCGCTAG
EY920097       <-- GGTGGCCCTTTTGGTGCTGTTATTGTCCACAATAACCAGGTCGTCGCTAG
EV547451       <-- GGTGGCCCTTTTGGTGCTGTTATTGTCCACAATAACCAGGTCGTCGCTAG
EY918543       <-- GGTGGCCCTTTTGGTGCTGTTATTGTCCATAATAACCAGGTCGTCGCTAG
EY918354       <-- GGTGGCCCTTTTGGTGCTGTTATTGTCCACAATAACCAGGTCGTCGCTAG
FD961408       <-- ..................................................
EV525698       --> GGTGGCCCTTTTGGTGCTGTTATTGTCCACAATAACCAGGTCGTCGCTAG
EV552554       --> GGTGGCCCTTTTGGTGCTGTTATTGTCCACAATAACCAGGTCGTCGCTAG
EX770291       --> GGTGGCCCTTTTGGTGCTGTTATTGTCCACAATAACCAGGTCGTCGCTAG
EX772248       --> GGTGGCCCTTTTGGTGCTGTTATTTTCCACAATAACCAGGTCGTCGCTAG
EY922382       --> GGTGGCCCTTTTGGTGCTGTTATTGTCCACAATAACCAGGTCGTCGCTAG
EY922609       --> GGTGGCCCTTTTGGTGCTGTTATTGTCCATAATAACCAGGTCGTCGCTAG
EY924448       --> GGTGGCCCTTTTGGTGCTGTTATTGTCCACAATAACCAGGTCGTCGCTAG
EY924709       --> GGTGGCCCTTTTGGTGCTGTTATTGTCCACAATAACCAGGTCGT......
FD965751       --> GGTGGCCCTTTTGGTGCTGTTATTGTCCACAATAACCAGGTCGTCGCTAG

               301    -    351
UN10249        --> CTGCCACAACATGGTTCTCAAGTACACTGACCCTACTGCTCATGCCGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530372       <-- CTGCCACAACATGGTTCTCAAGTACACTGACCCTACTGCTCATGCCGAAG
EY920097       <-- CTGCCACAACATGGTTCTCAAGTACACTGACCCTACTGCTCATGCCGAAG
EV547451       <-- CTGCCACAACATGGTTCTCAAGTACACTGACCCTACTGCTCATGCCGAAG
EY918543       <-- CTGCCACAACATGGTTCTCAAGTACACTGACCCTACTGCACATGCCGAAG
EY918354       <-- CTGCCACAACATGGTTCTCAAGTACACTGACCCTACTGCTCATGCCGAAG
FD961408       <-- ..................................................
EV525698       --> CTGCCACAACATGGTTCTCAAGTACACTGACCCTACTGCTCATGCCGAAG
EV552554       --> CTGCCACAACATGGTTCTCAAGTACACTGACCCTACTGCTCATGCCGAAG
EX770291       --> CTGCCACAACATGGTTCTCAAGTACACTGACCCTACTGCTCATGCCGAAG
EX772248       --> CTGCCACAACATGGTTCTCAAGTACACTGACCCTACTGCTCATGCCGAAG
EY922382       --> CTGCCACAACATGGTTCTCAAGTACACTGACCCTACTGCTCATGCCGAAG
EY922609       --> CTGCCACAACATGGTTCTCAAGTACACTGACCCTACTGCACATGCCGAAG
EY924448       --> CTGCCACAACATGGTTCTCAAGTACACTGACCCTACTGCTCATGCCGAAG
EY924709       --> ..................................................
FD965751       --> CTGCCACAACATGGTTCTCAAGTACACTGACCCTACTGCTCATGCCGAAG

               351    -    401
UN10249        --> TCACTGCCATTCGAGAGGCATGCAAGAAACTTAACAAAATCGAGCTCTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530372       <-- TCACTGCCATTCGAGAGGCATGCAAGAAACTTAACAAAATCGAGCTCTCA
EY920097       <-- TCACTGCCATTCGAGAGGCATGCAAGAAACTTAACAAAATCGAGCTCTCA
EV547451       <-- TCACTGCCATTCGAGAGGCATGCAAGAAACTTAACAAAATCGAGCTCTCA
EY918543       <-- TCACTGCCATTCGAGAGGCATGCAAGAAACTTAACAAAATCGAGCTCTCA
EY918354       <-- TCACTGCCATTCGAGAGGCATGCAAGAAACTTAACAAAATCGAGCTCTCA
FD961408       <-- ..................................................
EV525698       --> TCACTGCCATTCGAGAGGCATGCAAGAAACTTAACAAAATCGAGCTCTCA
EV552554       --> TCACTGCCATTCGAGAGGCATGCAAGAAACTTAACAAAATCGAGCTCTCA
EX770291       --> TCACTGCCATTCGAGAGGCATGCAAGAAACTTAACAAAATCGAGCTCTCA
EX772248       --> TCACTGCCATTCGAGAGGCATGCAAGAAACTTAACAAAATCGAGCTCTCA
EY922382       --> TCACTGCCATTCGAGAGGCATGCAAGAAACTTAACAAAATCGAGCTCTCA
EY922609       --> TCACTGCCATTCGAGAGGCATGCAAGAAACTTAACAAAATCGAGCTCTCA
EY924448       --> TCACTGCCATTCGAGAGGCATGCAAGAAACTTAACAAAATCGAGCTCTCA
EY924709       --> ..................................................
FD965751       --> TCACTGCCATTCGAGAGGCATGCAAGAAACTTAACAAAATCGAGCTCTCA

               401    -    451
UN10249        --> GAATGCGAGATTTACGCATCCTGTGAGCCGTGTCCCATGTGCTTCGGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530372       <-- GAATGCGAGATTTACGCATCCTGTGAGCCGTGTCCCATGTGCTTCGGAGC
EY920097       <-- GAATGCGAGATTTACGCATCCTGTGAGCCGTGTCCCATGTGCTTCGGAGC
EV547451       <-- GAATGCGAGATTTACGCATCCTGTGAGCCTTGTCCCATGTGCTTCGGAGC
EY918543       <-- GAATGCGAGATTTACGCATCCTGTGAGCCGTGTCCCATGTGCTTCGGAGC
EY918354       <-- GAATGCGAGATTTACGCATCCTGTGAGCCGTGTCCCATGTGCTTCGGAGC
FD961408       <-- .....................TGTGAGCCGTGTCCCATGTGCTTCGGAGC
EV525698       --> GAATGCGAGATTTACGCATCCTGTGAGCCGTGTCCCATGTGCTTCGGAGC
EV552554       --> GAATGCGAGATTTACGCATCCTGTGAGCCTTGTCCCATGTGCTTCGGAGC
EX770291       --> GAATGCGAGATTTACGCATCCTGTGAGCCGTGTCCCATGTGCTTCGGAGC
EX772248       --> GAATGCGAGATTTACGCATCCTGTGAGCCGTGTCCCATGTGCTTCGGAGC
EY922382       --> GAATGCGAGATTTACGCATCCTGTGAGCCGTGTCCCATGTGCTTCGGAGC
EY922609       --> GAATGCGAGATTTACGCATCCTGTGAGCCGTGTCCCATGTGCTTCGGAGC
EY924448       --> GAATGCGAGATTTACGCATCCTGTGAGCCGTGTCCCATGTGCTTCGGAGC
EY924709       --> ..................................................
FD965751       --> GAATGCGAGATTTACGCATCCTGTGAGCCGTGTCCCATGTGCTTCGGAGC

               451    -    501
UN10249        --> CATCCATCTCTCCAGACTCAAGAGATTGGTATATGGAGCGAAAGCTGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530372       <-- CATCCATCTCTCCAGACTCAAGAGATTGGTATATGGAGCGAAAGCTGAAG
EY920097       <-- CATCCATCTCTCCAGACTCAAGAGATTGGTATATGGAGCGAAAGCTGAAG
EV547451       <-- CATCCATCTCTCCAGACTCAAGAGATTGGTATATGGAGCGAAAGCTGAAG
EY918543       <-- CATCCATCTCTCCAGACTCAAGAGATTGGTATATGGAGCGAAAGCTGAAG
EY918354       <-- CATCCATCTCTCCAGACTCAAGAGATTGGTATATGGAGCGAAAGCTGAAG
FD961408       <-- CATCCATCTCTCCAGACTCAAGAGATTGGTATATGGAGCGAAAG-TGAAG
EV525698       --> CATCCATCTCTCCAGACTCAAGAGATTGGTATATGGAGCGAAAGCTGAAG
EV552554       --> CATCCATCTCTCCAGACTCAAGAGATTGGTATATGGAGCGAAAGCTGAAG
EX770291       --> CATCCATCTCTCCAGACTCAAGAGATTGGTATATGGAGCGAAAGCTGAAG
EX772248       --> CATCCATCTCTCCAGACTCAAGAGATTGGTATATGGAGCGAAAGCTGCAG
EY922382       --> CATCCATCTCTCCAGACTCAAGAGATTGGTATATGGAGCGAAAGCTGAAG
EY922609       --> CATCCATCTCTCCAGACTCAAGAGATTGGTATATGGAGCGAAAGCTGAAG
EY924448       --> CATCCATCTCTCCAGACTCAAGAGATTGGTATATGGAGCGAAAGCTGAAG
EY924709       --> ..................................................
FD965751       --> CATCCATCTCTCCAGACTCAAGAGATTGGTATATGGAGCGAAAG-TGAAG

               501    -    551
UN10249        --> CAGCCATAGCAATCGGGTTTGATGACTTCATAGCTGATGCTCTGAGAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530372       <-- CAGCCATAGCAATCGGGTTTGATGACTTCATAGCTGATGCTCTGAGAGGA
EY920097       <-- CAGCCATAGCAATCGGGTTTGATGACTTCATAGCTGATGCTCTGAGAGGA
EV547451       <-- CAGCCATAGCAATCGGGTTTGATGACTTCATAGCTGATGCTCTGAGAGGA
EY918543       <-- CAGCCATAGCAATCGGGTTTGATGACTTCATAGCTGATGCTCTGAGAGGA
EY918354       <-- CAGCCATAGCAATCGGGTTTGATGACTTCATAGCTGATGCTCTGAGAGGA
FD961408       <-- CAGCCATAGCAATCGGGTTTGATGACTTCATAGCTGATGCTCTGAGAGGA
EV525698       --> CAGCCATAGCAATCGGGTTTGATGACTTCATAGCTGATGCTCTGAGAGGA
EV552554       --> CAGCCATAGCAATCGGGTTTGATGACTTCATAGCTGATGCTCTGAGAGGA
EX770291       --> CAGCCATAGCAATCGGGTTTGATGACTTCATAGCTGATGCTCTGAGAGGA
EX772248       --> CAGCCATAGCAATCGGGTTTGATGACTTCATAGCTGATGCTCTGAGAGGA
EY922382       --> CAGCCATAGCAATCGGGTTTGATGACTTCATAGCTGATGCTCTGAGAGGA
EY922609       --> CAGCCATAGCAATCGGGTTTGATGACTTCATAGCTGATGCTCTGAGAGGA
EY924448       --> CAGCCATAGCAATCGGGTTTGATGACTTCATAGCTGATGCTCTGAGAGGA
EY924709       --> ..................................................
FD965751       --> CAGCCATAGCAATCGGGTTTGATGACTTCATAGCTGATGCTCTGAGAGGA

               551    -    601
UN10249        --> ACCGGTGTTTACCAGAAATCTAACCTGGTGATCAAGAAAGCCGACGGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530372       <-- ACCGGTGTTTACCAGAAATCTAACCTGGTGATCAAGAAAGCCGACGGGAA
EY920097       <-- ACCGGTGTTTACCAGAAATCTAACCTGGTGATCAAGAAAGCCGACGGGAA
EV547451       <-- ACCGGTGTTTACCAGAAATCTAACCTGGTGATCAAGAAAGCCGACGGGAA
EY918543       <-- ACCGGTGTTTACCAGAAATCTAACCTGGTGATCAAGAAAGCCGACGGGAA
EY918354       <-- ACCGGTGTTTACCAGAAATCTAACCTGGTGATCAAGAAAGCCGACGGGAA
FD961408       <-- ACCGGTGTTTACCAGAAATCTAACCTGGTGATCAAGAAAGCCGACGGGAA
EV525698       --> ACCGGTGTTTACCAGAAATCTAACCTGGTGATCAAGAAAGCCGACGGGAA
EV552554       --> ACCGGTGTTTACCAGAAATCTAACCTGGTGATCAAGAAAGCCGACGGGAA
EX770291       --> ACCGGTGTTTACCAGAAA................................
EX772248       --> ACCGGTGTTTACCAGAAATCTAACCTGGTGATCAAGAAAGCCGACGGGAA
EY922382       --> ACCGGTGTTTACCAGAAATCTAACCTGGTGATCAAGAAAGCCGACGGGAA
EY922609       --> ACCGGTGTTTACCAGAAATCTAACCTGGTGATCAAGAAAGCCGACGGGAA
EY924448       --> ACCGGTGTTTACCAGAAATCTAACCTGGTGATCAAGAAAGCCGACGGGAA
EY924709       --> ..................................................
FD965751       --> ACCGGTGTTTACCAGAAATCTAACCTGGTGATCAAG..............

               601    -    651
UN10249        --> CGGAGCTGTGATTGCTGAACAAGTGTTCCAGAACACTAAGGAGAAGTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530372       <-- CGGAGCTGTGATTGCTGAACAAGTGTTCCAGAACACTAAGGAGAAGTTCC
EY920097       <-- CGGAGCTGTGATTGCTGAACAAGTGTTCCAGAACACTAAGGAGAAGTTCC
EV547451       <-- CGGAGCTGTGATTGCTGAACAAGTGTTCCAGAACACTAAGGAGAAGTTCC
EY918543       <-- TGGAGCTGTGATTGCTGAACAAGTGTTCCAGAACACTAAGGAGAAGTTCC
EY918354       <-- CGGAGTTGTGATTGCTGAACAAGTGTTCCAGAACACTAAGGAGAAGTTCC
FD961408       <-- CGGAGCTGTGATTGCTGAACAAGTGTTCCAGAACACTAAGGAGAAGTTCC
EV525698       --> CGGAGCTGTGATTGCTGAACAAGTGTTCCAGAACACTAAGGAGAAGTTCC
EV552554       --> CGGAGCTGTGATTGCTGAACAAGTGTTCCAGAACACTAAGGAGAAGTTCC
EX770291       --> ..................................................
EX772248       --> CGGAGCTGTGATTGCTGAACAAGTGTTCCAGAACACTGAGGAGAAGTTCC
EY922382       --> CGGAGTTGTGATTGCTGAACAAGTGTTCCAGAcact..............
EY922609       --> TGGAGCTGTGATTGCTGAACAAGTGTTCCAGAACACT.............
EY924448       --> CGGAGCTGTGATTGCTGAACAAGTGTTCCAGAACACTAAAGAGAAGTTCC
EY924709       --> ..................................................
FD965751       --> ..................................................

               651    -    701
UN10249        --> GTTTATACTGAGAGACTTCTTCTCCTCCTTCATATCACATCCTTCTTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530372       <-- GTTTATACTGAGAGACTTCTTCTCCTCCTTCATATCACATCCTTCTTCTT
EY920097       <-- GTTTATACTGAGAGACTTCTTCTCCTCCTTCATGTCACATCCTTCTTCTT
EV547451       <-- GTTTATACTGAGAGACTTCTTCTCCTCCTTCATATCACATCCTTCTTCTT
EY918543       <-- GTTTATACTGAGAGACTTTTTCTCCTCCTTCATATCACATCCTTTTTTTT
EY918354       <-- GTTTATACTGAGAGACTTTTTCTCCTCCTTCATATCACATCCTTCTTCTT
FD961408       <-- GTTTATACTGAGAGACTTCTTCTCCTCCTTCATATCACATCCTTCTTCTT
EV525698       --> GTTTATACTGAGAGACTTCTTCTCCTCCTTCATATCACATCCTTCTTCTT
EV552554       --> GTTTATACTGAGAGACTTCTTCTCCTCCTTCATATCACATCCTTCTTCTT
EX770291       --> ..................................................
EX772248       --> GTTTATACTGAGAGACTTCTTCTCCTCCTTCATATCACATCCTTCTTCTT
EY922382       --> ..................................................
EY922609       --> ..................................................
EY924448       --> GTTTATACTGAGAGACTTCTTCTCCTCCTTCATGTCACATCCTTCTTCTT
EY924709       --> ..................................................
FD965751       --> ..................................................

               701    -    751
UN10249        --> CTCCTTATTCATTCATGATGGCCAATCAGAAGAAGAAGAAATGCACTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530372       <-- CTCCTTATTCATTCATGATGGCCAATCAGAAGAAGAAGAAATGCACTTT-  Raphanus raphanistrum subsp. maritimus
EY920097       <-- CTCCTTATTCATTCATGATGGCCAATCAGAAGAAGAAGAAATGCACTTTT  Raphanus raphanistrum subsp. landra
EV547451       <-- CTCCTTATTCATTCATGATGGCCAATCAGAAGAAGAAGAAATGCACTTT-  Raphanus raphanistrum subsp. raphanistrum (NY)
EY918543       <-- CTCCTTATTCATTCATGATGGCCAATCAGAAGAAGAAGAAATGCACTTTT  Raphanus raphanistrum subsp. landra
EY918354       <-- CTCCTTATTCATTCATGATGGCCAATCAGAAGAAGAAGAAATGCACTTTT  Raphanus raphanistrum subsp. landra
FD961408       <-- CTCCTTATTCATTCATGATGGCCAATCAGAAGAAGAAGAAATGCACTTT-  Raphanus raphanistrum subsp. maritimus
EV525698       --> CTCCTTATTCATTCATGATGGCCAATCAGAAGAAGAAGAAATGCACTTT-  Raphanus raphanistrum subsp. maritimus
EV552554       --> CTCCTTATTCATTCATGATGGCCAATCAGAAGAAGAAGAAATGCACTTT-  Raphanus raphanistrum subsp. raphanistrum (NY)
EX770291       --> ..................................................  Raphanus raphanistrum subsp. landra
EX772248       --> CTCCTTATTCATTCATGATGGCCAATCAGA-GA-GA-GAA-TGCACTTTT  Raphanus raphanistrum subsp. landra
EY922382       --> ..................................................  Raphanus raphanistrum subsp. landra
EY922609       --> ..................................................  Raphanus raphanistrum subsp. landra
EY924448       --> CTCCTTATTCATTCATGATGGCCAATCAGA-GAAGA-GAAATGCACTTTT  Raphanus raphanistrum subsp. landra
EY924709       --> ..................................................  Raphanus raphanistrum subsp. landra
FD965751       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               751    -    801
UN10249        --> GCTTTTAACCAAATAAATCTCTGTTTTCGAATTGTTAATT..
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530372       <-- GCTTTTAACCAAATAAATCTCTGTTTTCGAATTGTTAATTcc
EY920097       <-- GCTTTTAACCAAATAAATCTCTGTTTTCGAATTGTTAATTtc
EV547451       <-- GCTTTTAACCAAATAAATCTCTGTTTTCGAATTGTTAATTtc
EY918543       <-- GCTTTTAACCAAATAAATCTCTGTTTTCGAATTGTTAATTtc
EY918354       <-- GCTTTTAACCAAATAAATCTCTGTTTTCGAATTGTTAATTtc
FD961408       <-- GCTTTTAACCAAATAAATCTCTGTTTTCGAATTGTTAATTtc
EV525698       --> GCTTTTAACCAAATAAATCTCTGTTTTCGAATTGTTAATTcc
EV552554       --> GCTTTTA...................................
EX770291       --> ..........................................
EX772248       --> GCTTTTAcca................................
EY922382       --> ..........................................
EY922609       --> ..........................................
EY924448       --> GCTTT-AACCAA-TAAATCTCTGTTTT...............
EY924709       --> ..........................................
FD965751       --> ..........................................