1      -     51
UN10352        --> GGAGGAAGAGAAGGAAAGACTCTCTCGATTAAAGCAA-GCGTAGATCAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910770       <-- GGAGGAAGAGAAGGAAAGACTCTCTCGATTAAAGCAA-GCGTAGATCAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV531885       <-- .GAGGAAGAGAAGGAAAGACTCTCTCGATTAAAGCAA-GCGTGGATCAGA  Raphanus raphanistrum subsp. maritimus
FD961390       <-- ........gGAAGGAAAGACTCTCTCGATTAAAGCAA-GCGTAGATCAGA  Raphanus raphanistrum subsp. maritimus
EW737013       <-- .......................gtgGATTAAAGCAAAGCGTAGATCAGA  Raphanus sativus cv Rat-Tail Radish #3870
EY894756       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY894914       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY914800       --> GGAGGAAGAGAAGGAAAGACTCTCTCGATTAAAGCAA-GCGTAGATCAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV527706       --> .GAGGAAGAGAAGGAAAGACTCTCTCGATTAAAGCAA-GCGTGGATCAGA  Raphanus raphanistrum subsp. maritimus
FD965725       --> ........gGAAGGAAAGACTCTCTCGATTAAAGCAA-GCGTAGATCAGA  Raphanus raphanistrum subsp. maritimus
EY898810       --> .........ggAGGAAAGACTCTCTCGATTAAAGCAA-GCGTAGATCAGA  Raphanus raphanistrum subsp. maritimus
EY921320       --> .....................ggCTCGATTAAAGCAAAGCGTAGATCAGA  Raphanus raphanistrum subsp. landra
FD557037       --> .....................ggCTCGATTAAAGCAAAGCGTAGATCAGA  Raphanus raphanistrum subsp. landra
EW732538       --> .......................gtgGATTAAAGCAAAGCGTAGATCAGA  Raphanus sativus cv Rat-Tail Radish #3870
EV568100       --> ...........................gggAAAGCAAAGCGTAGATCAGA  Raphanus raphanistrum subsp. landra
EY913323       --> .............................................ggAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY899039       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               51     -    101
UN10352        --> TGGCAGCACCTTTCACGTTGAGGAAGATCGGAGTTCCGCCGAACTCAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910770       <-- TGGCAGCACCTTTCACGTTGAGGAAGATCGGAGTTCCGCCGAACTCAGCT
EV531885       <-- TGGCAGCACCTTTCACGTTGAGGAAGATCGGAGTTCCGCCGAACTCAGCT
FD961390       <-- TGGCAGCACCTTTCACGTTGAGGAAGATCGGAGTTCCGCCGAACTCAGCT
EW737013       <-- TGGCAGCACCTTTCACGTTGAGGAAGATCGGAGTTCCGCCGAACTCAGCT
EY894756       <-- .............CACGTTGAGGAAGATCGGAGTTCCGCCGAACTCAGCT
EY894914       <-- ..................................................
EY914800       --> TGGCAGCACCTTTCACGTTGAGGAAGATCGGAGTTCCGCCGAACTCAGCT
EV527706       --> TGGCAGCACCTTTCACGTTGAGGAAGATCGGAGTTCCGCCGAACTCAGCT
FD965725       --> TGGCAGCACCTTTCACGTTGAGGAAGATCGGAGTTCCGCCGAACTCAGCT
EY898810       --> TGGCGGCACCTTTCACGTTGAGGAAGATCGGAGTTCCGCCGAACTCAGCT
EY921320       --> TGGCAGCACCTTTCACGTTGAGGAAGATCGGAGTTCCGCCGAATTCAGCT
FD557037       --> TGGCAGCACCTTTCACGTTGAGGAAGATCGGAGTTCCGCCGAACTCAGCT
EW732538       --> TGGCAGCACCTTTCACGTTGAGGAAGATCGGAGTTCCGCCGAACTCAGCT
EV568100       --> TGGCAGCACCTTTCACGTTGAGGAAGATCGGAGTTCCGCCGAACTCAGCC
EY913323       --> TGGCAGCACCTTTCACGTTGAGGAAGATCGGAGTTCCGCCGAACTCAGCT
EY899039       --> ..................................................

               101    -    151
UN10352        --> AACCTGACTGAAGCTCGCCGCCGTGTTTTCGATTACTTCAGAGCTGCATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910770       <-- AACCTGACTGAAGCTCGCCGCCGTGTTTTCGATTACTTCAGAGCTGCATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV531885       <-- AACCTGACTGAAGCTCGCCGCCGTGTTTTCGATTACTTCAGAGCTGCATG  Raphanus raphanistrum subsp. maritimus
FD961390       <-- AACCTGACTGAAGCTCGCCGCCGTGTTTTCGATTACTTCAGAGCTGCATG  Raphanus raphanistrum subsp. maritimus
EW737013       <-- AACCTCACGGAGGCTCGCCGCCGTGTTTTCGATTACTTCAGAGCTGCATG  Raphanus sativus cv Rat-Tail Radish #3870
EY894756       <-- AACCTGACTGAAGCTCGCCGCCGTGTTTTCGATTACTTCAGAGCTGCATG  Raphanus raphanistrum subsp. maritimus
EY894914       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY914800       --> AACCTGACTGAAGCTCGCCGCCGTGTTTTCGATTACTTCAGAGCTGCATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV527706       --> AACCTGACTGAAGCTCGCCGCCGTGTTTTCGATTACTTCAGAGCTGCATG  Raphanus raphanistrum subsp. maritimus
FD965725       --> AACCTGACTGAAGCTCGCCGCCGTGTTTTCGATTACTTCAGAGCTGCATG  Raphanus raphanistrum subsp. maritimus
EY898810       --> AACCTGACTGAAGCTCGCCGCCGTGTTTTCGATTACTTCAGAGCTGCATG  Raphanus raphanistrum subsp. maritimus
EY921320       --> AACCTCACGGAGGCTCGCCGCCGTGCTTTCGATTACTTCAGAGCTGCATG  Raphanus raphanistrum subsp. landra
FD557037       --> AACCTCACGGAGGCTCGCCGCCGTGTTTTCGATTACTTCAGAGCTGCATG  Raphanus raphanistrum subsp. landra
EW732538       --> AACCTCACGGAGGCTCGCCGCCGTGTTTTCGATTACTTCAGAGCTGCATG  Raphanus sativus cv Rat-Tail Radish #3870
EV568100       --> AACCTCACGGAGGCTCGCCGCCGTGTTTTCGATTACTTCAGAGCTGCATG  Raphanus raphanistrum subsp. landra
EY913323       --> AACCTGACTGAAGCTCGCCGCCGTGTTTTCGATTACTTCAGAGCTGCATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY899039       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               151    -    201
UN10352        --> TAGATCCATCCCCACCATCATGGACATTTACAATCTACAAGACGTCGTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910770       <-- TAGATCCATCCCCACCATCATGGACATTTACAATCTACAAGACGTCGTCG
EV531885       <-- TAGATCCATCCCCACCATCATGGACATTTACAATCTACAAGACGTCGTCG
FD961390       <-- TAGATCCATCCCCACCATCATGGACATTTACAATCTACAAGACGTCGTCG
EW737013       <-- TAGATCCATCCCCACCATCATGGACATTTACAATCTACAAGACGTCGTCG
EY894756       <-- TAGATCCATCCCCACCATCATGGACATTTACAATCTACAAGACGTCGTCG
EY894914       <-- ..................................................
EY914800       --> TAGATCCATCCCCACCATCATGGACATTTACAATCTACAAGACGTCGTCG
EV527706       --> TAGATCCATCCCCACCATCATGGACATTTACAATCTACAAGACGTCGTCG
FD965725       --> TAGATCCATCCCCACCATCATGGACATTTACAATCTACAAGACGTCGTCG
EY898810       --> TAGATCCATCCCCACCATCATGGACATTTACAATCTACAAGACGTCGTCG
EY921320       --> TAGATCCATCCCCACCATCATGGACATTTACAATCTACAAGACGTCGTCG
FD557037       --> TAGATCCATCCCCACCATCATGGACATTTACAATCTACAAGACGTCGTCG
EW732538       --> TAGATCCATCCCCACCATCATGGACATTTACAATCTACAAGACGTCGTCG
EV568100       --> TAGATCCATCCCCACCATCATGGACATTTACAATCTACAAGACGTCGTCG
EY913323       --> TAGATCCATCCCCACCATCATGGACATTTACAATCTACGAGACGTCGTCG
EY899039       --> ..................................................

               201    -    251
UN10352        --> CGCCTTCTCAGCTCCGCTTTGCAATCTCTGCTCAGATTCGTAAAAACGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910770       <-- CGCCTTCTCAGCTCCGCTTTGCAATCTCTGCTCAGATTCGTAAAAACGCT
EV531885       <-- CGCCTTTTCAGCTCCGCTTTGCAATCTCTGCTCAGATTCGTAAAAACGCT
FD961390       <-- CGCCTTCTCAGCTCCGCTTTGCAATCTCTGCTCAGATTCGTAAAAACGCT
EW737013       <-- CGCCTTCTCAGCTCCGCTTTGCAATCTCTGCTCAGATTCGTAAAAACGCT
EY894756       <-- CGCCTTCTCAGCTCCGCTTTGCAATCTCTGCTCAGATTCGTAAAAACGCT
EY894914       <-- ..................................................
EY914800       --> CGCCTTCTCAGCTCCGCTTTGCAATCTCTGCTCAGATTCGTAAAAACGCT
EV527706       --> CGCCTTCTCAGCTCCGCTTTGCAATCTCTGCTCAGATTCGTAAAAACGCT
FD965725       --> CGCCTTCTCAGCTCCGCTTTGCAATCTCTGCTCAGATTCGTAAAAACGCT
EY898810       --> CGCCTTCTCAGCTCCGCTTTGCAATCTCTGCTCAGATTCGTAAAAACGCT
EY921320       --> CGCCTTCTCAGCTCCGCTTTGCAATCTCTGCTCAGATTCGTAAAAACGCT
FD557037       --> CGCCTTCTCAGCTCCGCTTTGCAATCTCTGCTCAGATTCGTAAAAACGCT
EW732538       --> CGCCTTCTCAGCTCCGCTTTGCAATCTCTGCTCAGATTCGTAAAAACGCT
EV568100       --> CGCCTTCTCAGCTCCGCTTTGCAATCTCTGCTCAGATTCGTAAAAACGCT
EY913323       --> CGCCTTCTCAGCTCCGCTTTGCAATCTCTGCTCAGATTCGTAAAAACGCT
EY899039       --> ..................................................

               251    -    301
UN10352        --> CACGTCACCGATCCTAAGGTGATTGATCTTCTTCTATTCAAGGGAATGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910770       <-- CACGTCACCGATCCTAAGGTGATTGATCTTCTTCTATTCAAGGGAATGGA
EV531885       <-- CACGTCACCGATCCTAAGGTGATTGATCTTCTTCTATTCAAGGGAATGGA
FD961390       <-- CACGTCACCGATCCTAAGGTGATTGATCTTCTTCTATTCAAGGGAATGGA
EW737013       <-- CACGTCACCGATCCTAAGGTGATTGATCTTCTTCTATTCAAGGGAATGGA
EY894756       <-- CACGTCACCGATCCTAAGGTGATTGATCTTCTTCTATTCAAGGGAATGGA
EY894914       <-- ..................................................
EY914800       --> CACGTCACCGATCCTAAGGTGATTGATCTTCTTCTATTCAAGGGAATGGA
EV527706       --> CACGTCACCGATCCTAAGGTGATTGATCTTCTTCTATTCAAGGGAATGGA
FD965725       --> CACGTCACCGATCCTAAGGTGATTGATCTTCTTCTATTCAAGGGAATGGA
EY898810       --> CACGTCACCGATCCTAAGGTGATTGATCTTCTTCTATTCAAGGGAATGGA
EY921320       --> CACGTCACCGATCCTAAGGTGATTGATCTTCTTCTATTCAAGGGAATGGA
FD557037       --> CACGTCACCGATCCTAAGGTGATTGATCTTCTTCTATTCAAGGGAATGGA
EW732538       --> CACGTCACCGATCCTAAGGTGATTGATCTTCTTCTATTCAAGGGAATGGA
EV568100       --> CACGTCACCGATCCTAAGGTGATTGATCTTCTTCTATTCAAGGGAATGGA
EY913323       --> CACGTCACCGATCCTAAGGTGATTGATCTTCTTCTATTCAAGGGAATGGA
EY899039       --> ..................................................

               301    -    351
UN10352        --> AGAGCTTACTGACATAGTGGATCACGCAAAGCAGCGTCACCACATTATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910770       <-- AGAGCTTACTGACATAGTGGATCACGCAAAGCAGCGTCACCACATTATTG
EV531885       <-- AGAGCTTACTGACATAGTGGATCACGCAAAGCAGCGTCACCACATTATTG
FD961390       <-- AGAGCTTACTGACATAGTGGATCACGCAAAGCAGCGTCACCACATTATTG
EW737013       <-- AGAGCTTACCGACATAGTGGATCACGCAAAGCAGCGTCACCACATTATTG
EY894756       <-- AGAGCTTACTGACATAGTGGATCACGCAAAGCAGCGTCACCACATTATTG
EY894914       <-- ...........................gAAGCAGCGTCACCACATTATTG
EY914800       --> AGAGCTTACTGACATAGTGGATCACGCAAAGCAGCGTCACCACATTATTG
EV527706       --> AGAGCTTACTGACATAGTGGATCACGCAAAGCAGCGTCACCACATTATTG
FD965725       --> AGAGCTTACTGACATAGTGGATCACGCAAAGCAGCGTCACCACATTATTG
EY898810       --> AGAGCTTACTGACATAGTGGATCACGCAAAGCAGCGTCACCACATTATTG
EY921320       --> AGAGCTTACTGACATAGTGGATCACGCAAAGCAGCGTCACCACATTATTG
FD557037       --> AGAGCTTACTGACATAGTGGATCACGCAAAGCAGCGTCACCACATTATTG
EW732538       --> AGAGCTTACCGACATAGTGGATCACGCAAAGCAGCGTCACCACATTATTG
EV568100       --> AGAGCTTACTGACATAGTGGATCACGCAAAGCAGCGTCACCACATTATTG
EY913323       --> AGAGCTTACTGACATAGTGGATCACGCAAAGCAGCGTCACCACATTATTG
EY899039       --> ...........................gAAGCAGCGTCACCACATTATTG

               351    -    401
UN10352        --> GTCAATACGTGGTGGGTGAAGGGCTCGTCCAGAATACCGGAAGCAAGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910770       <-- GTCAATACGTGGTGGGTGAAGGGCTCGTCCAGAATACCGGAAGCAAGGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV531885       <-- GTCAATACGTGGTGGGTGAAGGGCTCGTCCAGAATACCGGAAGCAAGGAT  Raphanus raphanistrum subsp. maritimus
FD961390       <-- GTCAATACGTGGTGGGTGAAGGGCTCGTCCAGAATACCGGAAGCAAGGAT  Raphanus raphanistrum subsp. maritimus
EW737013       <-- GTCAATACGTGGTGGGTGAAGGGCTCGTCCAGAATACTGGAAGCAAGGAT  Raphanus sativus cv Rat-Tail Radish #3870
EY894756       <-- GTCAATACGTGGTGGGTGAAGGGCTCGTCCAGAATACCGGAAGCAAGGAT  Raphanus raphanistrum subsp. maritimus
EY894914       <-- GTCAATACGTGGTGGGTGAAGGACTCGTCCAGAATACCGGAAGCAAGGAT  Raphanus raphanistrum subsp. maritimus
EY914800       --> GTCAATACGTGGTGGGTGAAGGGCTCGTCCAGAATACCGGAAGCAAGGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV527706       --> GTCAATACGTGGTGGGTGAAGGGCTCGTCCAGAATACCGGAAGCAAGGAT  Raphanus raphanistrum subsp. maritimus
FD965725       --> GTCAATACGTGGTGGGTGAAGGGCTCGTCCAGAATACCGGAAGCAAGGAT  Raphanus raphanistrum subsp. maritimus
EY898810       --> GTCAATACGTGGTGGGTGAAGGGCTCGTCCAGAATACCGGAAGCAAGGAT  Raphanus raphanistrum subsp. maritimus
EY921320       --> GTCAATACGTGGTGGGTGAAGGGCTCGTCCAGAATACTGGAAGCAAGGAT  Raphanus raphanistrum subsp. landra
FD557037       --> GTCAATACGTGGTGGGTGAAGGGCTCGTCCAGAATACTGGAAGCAAGGAT  Raphanus raphanistrum subsp. landra
EW732538       --> GTCAATACGTGGTGGGTGAAGGGCTCGTCCAGAATACTGGAAGCAAGGAT  Raphanus sativus cv Rat-Tail Radish #3870
EV568100       --> GTCAATACGTGGTGGGTGAAGGGCTCGTCCAGAATACTGGAAGCAAGGAT  Raphanus raphanistrum subsp. landra
EY913323       --> GTCAATACGTGGTGGGTGAAGGGCTCGTCCAGAATACCGGAAGCAAGGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY899039       --> GTCAATACGTGGTGGGTGAAGGACTCGTCCAGAATACCGGAAGCAAGGAT  Raphanus raphanistrum subsp. maritimus

               401    -    451
UN10352        --> CAAGGAAAGTCTGATTTTCTCAAGAACTTCTACACCAGCAACTACTTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910770       <-- CAAGGAAAGTCTGATTTCCTCAAGAACTTCTACACCAGCAACTACTTTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV531885       <-- CAAGGAAAGTTTGATTTTCTCAAGAACTTCTACACCAGCAACTACTTTTG  Raphanus raphanistrum subsp. maritimus
FD961390       <-- CAAGGAAAGTCTGATTTTCTCAAGAACTTCTACACCAGCAACTACTTTTG  Raphanus raphanistrum subsp. maritimus
EW737013       <-- CAAGGGAAGTCTGATTTTCTCAAGAACTTTTACACCAGCAACTACTTTTG  Raphanus sativus cv Rat-Tail Radish #3870
EY894756       <-- CAAGGAAAGTCTGATTTTCTCAAGAACTTCTACACCAGCAACTACTTTTG  Raphanus raphanistrum subsp. maritimus
EY894914       <-- CAAGGAAAGTCTGATTTTCTCAAGAACTTCTACACCAGCAACTACTTTTG  Raphanus raphanistrum subsp. maritimus
EY914800       --> CAAGGAAAGTCTGATTTCCTCAAGAACTTCTACACCAGCAACTACTTTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV527706       --> CAAGGAAAGTCTGATTTTCTCAAGAACTTCTACACCAGCAACTACTTTTG  Raphanus raphanistrum subsp. maritimus
FD965725       --> CAAGGAAAGTCTGATTTTCTCAAGAACTTCTACACCAGCAACTACTTTTG  Raphanus raphanistrum subsp. maritimus
EY898810       --> CAAGGAAAGTCTGATTTTCTCAAGAACTTCTACACCAGCAACTACTTTTG  Raphanus raphanistrum subsp. maritimus
EY921320       --> CAAGGGAAGTCTGATTTTCTCAAGAACTTCTACACCAGCAACTACTTTTG  Raphanus raphanistrum subsp. landra
FD557037       --> CAAGGGAAGTCTGATTTTCTCAAGAACTTCTACACCAGCAACTACTTTTG  Raphanus raphanistrum subsp. landra
EW732538       --> CAAGGGAAGTCTGATTTTCTCAAGAACTTTTACACCAGCAACTACTTTTG  Raphanus sativus cv Rat-Tail Radish #3870
EV568100       --> CAAGGGAAGTCTGATTTTCTCAAGAACTTCTACACCAGCAACTACTTTTG  Raphanus raphanistrum subsp. landra
EY913323       --> CAAGGAAAGTCTGATTTTCTCAAGAACTTCTACACCAGCAACTACTTTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY899039       --> CAAGGAAAGTCTGATTTTCTCAAGAACTTCTACACCAGCAACTACTTTTG  Raphanus raphanistrum subsp. maritimus

               451    -    501
UN10352        --> AGGCTGGTGATTTGTTTTCTCTACTGGCTTTTTTCATGCTACCAAGTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910770       <-- AGGCTGGTGATTTGTTTTCTCTACTGGCTTTTTTCATGCTACCAAGTTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV531885       <-- AGGCTGGTGATTTGTTTTCTCTACTGGCTTTTTTCATGCTACCAAGTTCT  Raphanus raphanistrum subsp. maritimus
FD961390       <-- AGGCTGGTGATTTGTTTTCTCTACTGGCTTTTTTCATGCTACCAAGTTCT  Raphanus raphanistrum subsp. maritimus
EW737013       <-- A-ACTGGTGATTTGTTTTCTCTACTGGCTTTTTTCATGCTACCAAGTTCT  Raphanus sativus cv Rat-Tail Radish #3870
EY894756       <-- AGGCTGGTGATTTGTTTTCTCTACTGGCTTTTTTCATGCTACCAAGTTCT  Raphanus raphanistrum subsp. maritimus
EY894914       <-- AGGCTGGTGATTTGTTTTCTCTACTGGCTTTTTTCATGCTACCAAGTTCT  Raphanus raphanistrum subsp. maritimus
EY914800       --> AGGCTGGTGATTTGTTTTCTCTACTGGCTTTTTTCATGCTACCAAGTTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV527706       --> AGGCTGGTGATTTGTTTTCTCTACTGGCTTTTTTCATGCTACCAAGTTCT  Raphanus raphanistrum subsp. maritimus
FD965725       --> AGGCTGGTGATTTGTTTTCTCTACTGGCTTTTTTCATGCTACCAAGTTCT  Raphanus raphanistrum subsp. maritimus
EY898810       --> AGGCTGGTGATTTGTTTTCTCTACTGGCTTTTTTCATGCTACCAAGTTCT  Raphanus raphanistrum subsp. maritimus
EY921320       --> A-ACTGGTGATTTGTTTTCTCTACTGACTTTTTTCAT-CTACCAAGTTCT  Raphanus raphanistrum subsp. landra
FD557037       --> A-ACTGGTGATTTGTTTTCTCTACTGGCTTTTTTCATGCTACCAAGTTCT  Raphanus raphanistrum subsp. landra
EW732538       --> A-ACTGGTGATTTGTTTTCTCTACTGGCTTTTTTCATGCTACCAAGTTCT  Raphanus sativus cv Rat-Tail Radish #3870
EV568100       --> A-ACTGGTGATTTGTTTTCTCTACTGGCTTTTTTCATGCTACCAAGTTCT  Raphanus raphanistrum subsp. landra
EY913323       --> AGGCTGGTGATTTGTTTTCTCTACTGGCTTTTTTCATGCTACCAAGTTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY899039       --> AGGCTGGTGATTTGTTTTCTCTACTGGCTTTTTTCATGCTACCAAGTTCT  Raphanus raphanistrum subsp. maritimus

               501    -    551
UN10352        --> TGCATAAGTCTTTTTCAGTATTGTATTTTCGACTTTAGGAAGAAGTCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910770       <-- TGCATAAGTCTTTTTCAGTATTGTATTTTCGACTTTAGGAAGAAGTCTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV531885       <-- TGCATAAGTCTTTTTCAGTATTGTATTTTCGACTTTAGGAAGAAGTCTTC  Raphanus raphanistrum subsp. maritimus
FD961390       <-- TGCATAAGTCTTTTTCAGTATTGTATTTTCGACTTTAGGAAGAAGTCTTC  Raphanus raphanistrum subsp. maritimus
EW737013       <-- TGCATAAGTCTTTTTCAGTATTGTATTTTCGACTT-AGGAAGAAGTCTTC  Raphanus sativus cv Rat-Tail Radish #3870
EY894756       <-- TGCATAAGTCTTTTTCAGTATTGTATTTTCGACTTTAGGAAGAAGTCTTC  Raphanus raphanistrum subsp. maritimus
EY894914       <-- TGCACAAGTCTTTTTCAGTATTGTATTTTCGACTTTAGGAAGAAGTCTTC  Raphanus raphanistrum subsp. maritimus
EY914800       --> TGCATAAGTCTTTTTCAGTATTGTATTTTCGACTTTAGGAAGAAGTCTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV527706       --> TGCATAAGTCTTTTTCAGTATTGTATTTTCGACTTTAGGAAGAAGTCTTC  Raphanus raphanistrum subsp. maritimus
FD965725       --> TGCATAAGTCTTTTTCAGTATTGTATTTTCGACTTTAGGAAGAAGTCTTC  Raphanus raphanistrum subsp. maritimus
EY898810       --> TGCATAAGTCTTTTTCAGTATTGTATTTTCGACTTTAGGAAGAAGTCTTC  Raphanus raphanistrum subsp. maritimus
EY921320       --> TGCATAAGTCTTTTTCAGTATTGTATTTTCGACTT-AGGAAGAAGTCTTC  Raphanus raphanistrum subsp. landra
FD557037       --> TGCACAAGTCTTTTTCAGTATTGCATTTTCGACTT-AGGAAGAAGTCTTC  Raphanus raphanistrum subsp. landra
EW732538       --> TGCATAAGTCTTTTTCAGTATTGTATTTTCGACTT-AGGAAGAAGTCTTC  Raphanus sativus cv Rat-Tail Radish #3870
EV568100       --> TGCATAAGTCTTTTTCAGTATTGTATTTTCGACTT-AGGAAGAAGTCTTC  Raphanus raphanistrum subsp. landra
EY913323       --> TGCATAAGTCTTTTTCAGTATTGTATTTTCGACTTTAGGAAGAAGTCTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY899039       --> TGCACAAGTCTTTTTCAGTATTGTATTTTCGACTTTAGGAAGAAGTCTTC  Raphanus raphanistrum subsp. maritimus

               551    -    601
UN10352        --> TTCCCTGAGAGAATAATTTGTATGAATTTCGCCAAACCTCTCTATAAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910770       <-- TTCCCTGAGAGAATAATTTGTATGAATTTCGCCAAACCTCTCTATAAGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV531885       <-- TTCCCTGAGAGAATAATTTGTATGAATTTCGCCAAACCTCTCTATAAGTT  Raphanus raphanistrum subsp. maritimus
FD961390       <-- TTCCCTGAGAGAATAATTTGTATGAATTTCGCCAAACCTCTCTATAAGTT  Raphanus raphanistrum subsp. maritimus
EW737013       <-- TTCC-TGAGAGAATAATTTGTATGAATTTCGCCAAACCTCTCTATAAGTT  Raphanus sativus cv Rat-Tail Radish #3870
EY894756       <-- TTCCCTGAGAGAATAATTTGTATGAATTTCGCCAAACCTCTCTATAAGTT  Raphanus raphanistrum subsp. maritimus
EY894914       <-- TTCCCTGAGAGAATAATTTGTATGAATTTCGCCAAACCTCTCTATAAGTT  Raphanus raphanistrum subsp. maritimus
EY914800       --> TTCCCTGAGAGAATAATTTGTATGAATTTCGCCAAACCTCTCTATAAGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV527706       --> TTCCCTGAGAGAATAATTTGTATGAATTTCGCCAAACCTCTCTATAAGTT  Raphanus raphanistrum subsp. maritimus
FD965725       --> TTCCCTGAGAGAATAATTTGTATGAATTTCGCCAAACCTCTCTATAAGTT  Raphanus raphanistrum subsp. maritimus
EY898810       --> TTCCCTGAGAGAATAATTTGTATGAATTTCGCCAAACCTCTCTATAAGTT  Raphanus raphanistrum subsp. maritimus
EY921320       --> TTCC-TGAGA--ATAATTTGTATGAATTTCGCCAAACCTCTCTATAAGTT  Raphanus raphanistrum subsp. landra
FD557037       --> TTCC-TGAGA--ATAATTTGTATGAATTTCGCCAAACCTCTCTATAAGTT  Raphanus raphanistrum subsp. landra
EW732538       --> TTCC-TGAGAGAATAATTTGTATGAATTTCGCCAAACCTCTCTATAAGTT  Raphanus sativus cv Rat-Tail Radish #3870
EV568100       --> TTCC-TGAGA--ATAATTTGTATGAATTTCGCCAAACCTCTCTATAAGTT  Raphanus raphanistrum subsp. landra
EY913323       --> TTCCCTGAGAGAATAATTTGTATGAATTTCGCCAAACCTCTCTATAAGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY899039       --> TTCCCTGAGAGAATAATTTGTATGAATTTCGCCAAACCTCTCTATAAGTT  Raphanus raphanistrum subsp. maritimus

               601    -    651
UN10352        --> GTAGCTGTGACAGTCTTTGCTGTGCAAATATTGCTATGATTTCAAGATAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910770       <-- GTAGCTGTGACAGTCTTTGCTGTGCAAATATTGCTATGATTTCAAGATAC
EV531885       <-- GTAGCTGTGACAGTCTTTGCTGTGCAAATATTGCTATGATTTCAAGATAa
FD961390       <-- GTAGCTGTGACAGTCTTTGCTGTGCAAATATTGCTATGATTTC.......
EW737013       <-- GTAGCTGTGACAGTCTTTGCTGTGC.........................
EY894756       <-- GTAGCTGTGACAGcc...................................
EY894914       <-- GTAGCTGTGACAGTCTTTGCTGTGCAAATATTGCTATGATTTCAAGAT..
EY914800       --> GTAGCTGTGACAGTCTTTGCTGTGCAAATATTGCTATGATTTCAAGATAC
EV527706       --> GTAGCTGTGACAGTCTTTGCTGTGCAAATATTGCTATGATTTCAAGATAa
FD965725       --> GTAGCTGTGACAGTCTTTGCTGTGCAAATATTGCTATGATTTC.......
EY898810       --> GTAGCTGTGACAGcc...................................
EY921320       --> GTAGCTGTGACAGTCTTTGCTGTGCAA-TATTGCTGTGATTT........
FD557037       --> GTAGCTGTGACAGTCTTTGCTGTGCAAATATTGCTATGATTTCAAGATA.
EW732538       --> GTAGCTGTGACAGTCTTTGCTGTGC.........................
EV568100       --> GTAGCTGTGACAGTCTTTGCTGTGCAAATATTGCTATGATTTCAAG....
EY913323       --> GTAGCTGTGACAGTCTTTGCTGTGCAAATATTGCTATGAT..........
EY899039       --> GTAGCTGTGACAGTCTTTGCTGTGCAAATATTGCTATGATTTCAAGAT..

               651    -    701
UN10352        --> GTAATCAGCCAAAAAAAA
                   ~~~~~~~~~~~~~~~~~~
EY910770       <-- GTAATCAGCC........
EV531885       <-- g.................
FD961390       <-- ..................
EW737013       <-- ..................
EY894756       <-- ..................
EY894914       <-- ..................
EY914800       --> GTAATCAGCCAAAAAAAA
EV527706       --> g.................
FD965725       --> ..................
EY898810       --> ..................
EY921320       --> ..................
FD557037       --> ..................
EW732538       --> ..................
EV568100       --> ..................
EY913323       --> ..................
EY899039       --> ..................