Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN10364

               1      -     51
UN10364        --> ACCAAGCAACATTTGTTCTCTTTGATATTACAGCACAAAGTTCTTATACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD571275       <-- .....................TTGATATTACAGCACAAAGTTCTTATACC
EV528614       <-- ..................................................
EY899557       <-- ..................................................
FD984042       --> ACCAAGCAACATTTGTTCTCTTTGATATTACAGCACAAAGTTCTTATACC
EX891503       --> ..................................................
EW719463       --> ..................................................

               51     -    101
UN10364        --> GCAAAAAA-CACAACCTAACTGAGATCATAAGAGTCGTAACAAAAACTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD571275       <-- GCAAAAAAACACAACCTAACTGAGATCATAAGAGTCGCAACAAAAACTGA
EV528614       <-- ..................................................
EY899557       <-- ..................................................
FD984042       --> GCAAAAAA-CACAACCTAACTGAGATCATAAGAGTCGTAACAAAAACTGA
EX891503       --> .............................AAGAGTCGTAACAAAAACTGA
EW719463       --> ..................................................

               101    -    151
UN10364        --> TAAATAAAACAATGTGCAAATCTCAAAACATCAAAATAGTAAAAGCCACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD571275       <-- TAAATAAAACAATGTGCAAATCTCAAAACATCAAAATAGTAAAAGCCACA
EV528614       <-- agacaAAAACAATGTGCAAATCTCAAAACATCAAAATAGTAAAAGCCACA
EY899557       <-- ..................................................
FD984042       --> TAAATAAAACAATGTGCAAATCTCAAAACATCAAGATAGTAAAAGCCACA
EX891503       --> TAAATAAAACAATGTGCAAATCTCAAAACATCAAAATAGTAAAAGCCACA
EW719463       --> ..................................................

               151    -    201
UN10364        --> AGAGAATGAAATCACGACGAGGCCGCAGCTTGTAGCTGTCTAACTTTACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD571275       <-- AGAGAATGAAATCACGACGAGGCCGCAGCTTGTAGCTGTCTAACTTTACC
EV528614       <-- AGAGAATGAAATCACGACGAGGCCGCAGCTTGTAGCTGTCTAACTTTACC
EY899557       <-- ..................................................
FD984042       --> AGAGAATGAAATCACGACGAGGCCGCAGCTTGTAGCTGTCTAACTTTACC
EX891503       --> AGAGAATGAAATCACGACGAGGCCGCAGCTTGTAGCTGTCTAACTTTACC
EW719463       --> ..................................................

               201    -    251
UN10364        --> CTGCAAGACCATCCCCGCTTCATCAGCCACACTTTTCTTCTTGGCCAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD571275       <-- CTGCAAGACCATCCCCGCTTCATCAGCCACACTTTTCTTCTTGGCCAACA
EV528614       <-- CTGCAAGACCATCCCCGCTTCATCAGCCACACTTTTCTTCTTGGCCAACA
EY899557       <-- ..................................................
FD984042       --> CTGCAAGACCATCCCCGCTTCATCAGCCACACTTTTCTTCTTGGCCAACA
EX891503       --> CTGCAAGACCATCCCCGCTTCATCAGCCACACTTTTCTTCTTGGCCGACA
EW719463       --> ..................................................

               251    -    301
UN10364        --> CCTCAAAGAGTTGTTCATAGTTGGATTTCAACAAGTTGATCTTCCTCTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD571275       <-- CCTCAAAGAGTTGTTCATAGTTGGATTTCAACAAGTTGATCTTCCTCTGA
EV528614       <-- CCTCAAAGAGTTGTTCATAGCTGGATTTCAACAAGTTGATCTTCCTCTGA
EY899557       <-- ..................................................
FD984042       --> CCTCAAAGAGTTGTTCATAGTTGGATTTCAACAAGTTGATCTTCCTCTGA
EX891503       --> CCTCAAAGAGTTGTTCATAGTTGGATTTCAACAAGTTGATCTTCCTCTGA
EW719463       --> ...........................................CCTCTGA

               301    -    351
UN10364        --> CAATAGTCTTTTCCATCCTCCATTGTTTTCTCGATGAAGTAACCAGTGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD571275       <-- CAATAGTCTTTTCCATCCTCCATTGTTTTCTCGATGAAGTAACCAGTGCC
EV528614       <-- CAATAGTCTTTTCCATCCTCCATTGTTTTCTCGATGAAGTAACCAGTGCC
EY899557       <-- ..................................................
FD984042       --> CAATAGTCTTTTCCATCCTCCATTGTTTTCTCGATGAAGTAACCAGTGCC
EX891503       --> CAATAGTCTTTTCCATCCTCCATTGTTTTCTCGATGAAGTAACCAGTGCC
EW719463       --> CAATAGTCTTTTCCATCCTCCATTGTTTTCTCGATGAAGTAACCAGTGCC

               351    -    401
UN10364        --> GATATCAACAAGAACCTTATCAGCTTCATCAAGCGTCCCAGGCACGTACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD571275       <-- GATATCAACAAGAACCTTATCAGCTTCATCAAGCGTCCCAGGCACGTACA
EV528614       <-- GATATCAACAAGAACCTTATCAGCTTCATCAAGCGTCCCAGGCACGTACA
EY899557       <-- ....................CAGCTTCATCAAGCGTCCCAGGCACGTACA
FD984042       --> GATATCAACAAGAACCTTATCAGCTTCATCAAGCGTCCCAGGCACGTACA
EX891503       --> GATATCAACAAGAACCTTATCAGCTTCATCAAGCGTCCCAGGCACGTACA
EW719463       --> GATATCAACAAGAACCTTATCAGCTTCATCAAGCGTCCCAGGCACGTACA

               401    -    451
UN10364        --> GAGACGCGGTGAGCGGTACAAGCATCTTCTTGCCTTGTGGTCTCAGCGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD571275       <-- GAGACGCGGTGAGCGGTACAAGCATCTTCTTGCCTTGTGGTCTCAGCGAT  Raphanus sativus cv Early Scarlet Globe
EV528614       <-- GAGACGCGGTGAGCGGTACAAGCATCTTCTTGCCTTGTGGTCTAAGCGAT  Raphanus raphanistrum subsp. maritimus
EY899557       <-- GAGACGCGGTGAGCGGTACAAGCATCTTCTTGCCTTGTGGTCTAAGCGAG  Raphanus raphanistrum subsp. maritimus
FD984042       --> GAGACGCGGTGAGCGGTACAAGCATCTTCTTGCCTTGTGGTCTAAGCGAT  Raphanus raphanistrum subsp. landra
EX891503       --> GAGACGCGGTGAGCGGTACAAGCATCTTCTTGCCTTGTGGTCTCAGCGAT  Raphanus sativus var. oleiformis
EW719463       --> GAGACGCGGTGAGCGGTACAAGCATCTTCTTGCCTTGTGGTCTCAGCGAT  Raphanus sativus var. oleiformis

               451    -    501
UN10364        --> AGATCGTTGAGAGCTCCCGCGGCGGATTCGAGGCGTGCGTTGGCTGTGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD571275       <-- AGATCGTTGAGAGCTCCCGCGGCGGACTCGAGGCGAGCGTTGGCTGTGCG
EV528614       <-- AGATCGTTGAGAGCTCCCGCGGCGGATTCGAGGCGTGCGTTGGCTGTGCG
EY899557       <-- AGATCGTTGAGAGCTCCCGCGGCGGATTCGAGGCGTGCGTTGGCTGTGCG
FD984042       --> AGATCGTTGAGAGCTCCCGCGGCGGATTCGAGGCGTGCGTTGGCTGTGCG
EX891503       --> AGATCGTTGAGAGCTCCCGCGGCGGACTCGAGGCGag.............
EW719463       --> ..................................................

               501    -    551
UN10364        --> GATGTTGTTGAGACTGTCCTGGAGGAGATTCACTTCCAGATCCGCTTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD571275       <-- GATGTTGTTGAGACTGTCCTGGAGGAGATTCACTTCCAGATCCGCTTGCT
EV528614       <-- GATGTTGTTGAGACTGTCCTGGAGGAGATTCACTTCCAGATCCGCTTGCT
EY899557       <-- GATGTTGTTGAGACTGTCCTGGAGGAGATTCACTTCCAGATCCGCTTGCT
FD984042       --> GATGTTGTTGAGACTGTCCTGGAGGAGATTCACTTCCAGATCCGCTTGCT
EX891503       --> ..................................................
EW719463       --> ..................................................

               551    -    601
UN10364        --> CCTTCAGCGCTTTCAGCTGATCGATCCCCATCTTCTCCAGCTCTCCTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD571275       <-- CCTTCAGCGCTTTCAGCTGATCGATCCCCATCTTCTCCAGCTCTCCTCTC
EV528614       <-- CCTTCAACGCTTTCAGCTGATCGATCCCCATCTTCTCCAGCTCTCCTCTA
EY899557       <-- CCTTCAGCGCTTTCAGCTGATCGATCCCCATCTTCTCCAGCTCTCCTCTC
FD984042       --> CCTTCAGCGCTTTCAGCTGATCGATCCCCATCTTCTCCAGCTCTACTCTC
EX891503       --> ..................................................
EW719463       --> ..................................................

               601    -    651
UN10364        --> GCCGATGATGACGACGTCATTCTCTC--TCTCTCTCTCTCTCTCAATCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD571275       <-- GCCGATGATGACGACGCCATTCTCTC--AATCTCTCTCTCTCCCAATCTC
EV528614       <-- GCCGATGCTGACGACGCCATTCTCTCAATCTCTCTCTCTCTCTCAATCTC
EY899557       <-- GCCGATGATGACGACGTCATTCTCTC--TCTCTCTCTCTCTCTCAATCTC
FD984042       --> GCCGATGATGACGACGTCATTCTCTC--TCTCTCTCTCTCTCTCAATCTC
EX891503       --> ..................................................
EW719463       --> ..................................................

               651    -    701
UN10364        --> TCAGTCGCGTCCTCCGAGTCAGCTGAACTCTGCGGCGAAAGCACTTCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD571275       <-- TCAGTCGCGTCCTCCGAGTCAGCTcc........................
EV528614       <-- TCAGTCGCGTCCTCCGAGTCAGCTGccc......................
EY899557       <-- TCGGTCGCGTCCCCCGAGTCAGCTGAACTCTGCGGCGAAAGCACTTCTCC
FD984042       --> TCAGTCGCGTCCTCCGAGTCAGCTGAACTCTGCGGCGAAAGCACTTCT..
EX891503       --> ..................................................
EW719463       --> ..................................................

               701    -    751
UN10364        --> GCTTCGAGACGCCGAAGTCCGTGTTTGATGTGAGTTTGGTTAACGGAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD571275       <-- ..................................................
EV528614       <-- ..................................................
EY899557       <-- GCTTCGAGACGCCGAAGTCCGTGTTTGATGTGAGTTTGGTTAACGGAAAG
FD984042       --> ..................................................
EX891503       --> ..................................................
EW719463       --> ..................................................

               751    -    801
UN10364        --> TAGAAGAACTCAACAGTGGGATGAACAGAGACGTTTTATTAGAGTCGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD571275       <-- ..................................................
EV528614       <-- ..................................................
EY899557       <-- TAGAAGAACTCAACAGTGGGATGAACAGAGACGTTTTATTAGAGTCGGAA
FD984042       --> ..................................................
EX891503       --> ..................................................
EW719463       --> ..................................................

               801    -    851
UN10364        --> TAACGAGGGTACAAGAGTAAGAAAGCCGGCTAGTCGATGCTCGGTGAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD571275       <-- ..................................................
EV528614       <-- ..................................................
EY899557       <-- TAACGAGGGTACAAGAGTAAGAAAGCCGGCTAGTCGATGCTCGGTGAGCT
FD984042       --> ..................................................
EX891503       --> ..................................................
EW719463       --> ..................................................

               851    -    901
UN10364        --> CCTAGCCGGAAGTACAAGATAGCGGCGAGATACAAAGAGAATAAAGGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD571275       <-- ..................................................
EV528614       <-- ..................................................
EY899557       <-- CCTAGCCGGAAGTACAAGATAGCGGCGAGATACAAAGAGAATAAAGGAAA
FD984042       --> ..................................................
EX891503       --> ..................................................
EW719463       --> ..................................................

               901    -    951
UN10364        --> CCCTAATCTCC
                   ~~~~~~~~~~~
FD571275       <-- ...........
EV528614       <-- ...........
EY899557       <-- CCCTAATCTCC
FD984042       --> ...........
EX891503       --> ...........
EW719463       --> ...........