Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN10368

               1      -     51
UN10368        --> GAGGGACTAAACGACTGTCTGTTGCCACTTTTGAGCTTATCATCACCC-A
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY453898       <-- GAGGGACTAAACGACTGTCTGTTGCCACTTTTGAGCTTATCATCACCC-A
FD578592       <-- ...........CGACTGTCTGTTGCCACTTTTGAGCTTATCATCACCCCA
EY924299       <-- .........ttttttTGTCTGTTGCCATTTTTGAGCTTATCGTCACCC-A
FD563054       <-- ................................GAGCTTATCATCACCC-A
EY923655       <-- ..................................................
EV524800       <-- .........................................ggtttagac
FD556716       <-- ..................................................
EY950125       <-- ..................................................
EY945504       --> ...GGACTAAACGACTGTCTGTTGCCACTTTTGAGCTTATCATCACCC-A
FD582724       --> ....GACTAAACGACTGTCTGTTGCCACTTTTGAGCTTATCATCACCC-A
EY919429       --> ................GTCTGTTGCCATTTTTGAGCTTATCGTCACCC-A
EY919980       --> ................GTCTGTTGCCATTTTTGAGCTTATCGTCACCC-A
FD566793       --> ................................GAGCTTATCATCACCC-A
EV529708       --> .........................................ggtttagac
FD552967       --> ..................................................

               51     -    101
UN10368        --> GAAAGGGTAAATATGTTTAGAAGACGATACATACAAGTGGAAATAAAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY453898       <-- GAAAGGGTAAATATGTTTAGAAGACGATACATACAAGTGGAAATAAAAGG  Raphanus sativus cv GSK3-1
FD578592       <-- TAAAGGGTAAATATGTTCAGAAGACGATACATACAAGCGGAAATAAAAGG  Raphanus sativus cv Rat-Tail Radish #3870
EY924299       <-- GAAAGGGTAGATATGTTTAGAAGACGATACATACAAGTGGAAATAAAAGG  Raphanus raphanistrum subsp. landra
FD563054       <-- GAAAGGGTAAATATGTT-AGAAGACGATACATACAAGTGGAAATAAAAGG  Raphanus sativus var. oleiformis
EY923655       <-- ..AAGGGTAGATATGTTTAGAAGACGATACATACAAGTGGAAATAAAAGG  Raphanus raphanistrum subsp. landra
EV524800       <-- aatttcccAAATATGTTTAGAAGACGATACATACAAGTGGAAATAAAAGG  Raphanus raphanistrum subsp. maritimus
FD556716       <-- ...............................ctCAAGTGGAAATAAAAGG  Raphanus raphanistrum subsp. landra
EY950125       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY945504       --> TAAAGGGTAAATATGTTTAGAAGACGATACATACAAGTGGAAATAAAAGG  Raphanus sativus cv Rat-Tail Radish #3870
FD582724       --> TAAAGGGTAAATATGTTTAGAAGACGATACATACAAGTGGAAATAAAAGG  Raphanus sativus cv Rat-Tail Radish #3870
EY919429       --> GAAAGGGTAGATATGTTTAGAAGACGATACATACAAGTGGAAATAAAAGG  Raphanus raphanistrum subsp. landra
EY919980       --> GAAAGGGTAGATATGTTTAGAAGACGATACATACAAGTGGAAATAAAAGG  Raphanus raphanistrum subsp. landra
FD566793       --> GAAAGGGTAAATATGTTTAGAAGACGATACATACAAGTGGAAATAAAAGG  Raphanus sativus var. oleiformis
EV529708       --> aatttcccAAATATGTTTAGAAGACGATACATACAAGTGGAAATAAAAGG  Raphanus raphanistrum subsp. maritimus
FD552967       --> ...............................ctCAAGTGGAAATAAAAGG  Raphanus raphanistrum subsp. landra

               101    -    151
UN10368        --> CATTATCAAGAAAAACACAATCAATCACAGAGACAGAGAAAAA-GAAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY453898       <-- CATTATCAAGAAAAACACAATCAATAACAGAGACAGAGAAAAA-GAAGCT
FD578592       <-- CATTGTCAAGAAAGACACAATCAATCACAGAGACAGAGAAAAAAGAAGCT
EY924299       <-- CATTATCAAGAAAAACACAATCAATCACAGAGACAGAGAAAAA-GAAGCT
FD563054       <-- CATTATCAAGAAAAACACAATCAATAACAGAGACAGAGAAAAA-GAAGCT
EY923655       <-- CATTATCAAGAAAAACACAATCAATCACAGAGACAGAGAAAAA-GAAGCT
EV524800       <-- CATTATCAAGAAAAACACAATCAATCACAGAGACAGAGAAAAA-TAAGCT
FD556716       <-- CATTATCAAGAAAAACACAATCAATCACAGAGACAGAGAAAAA-GAAGCT
EY950125       <-- ..................................................
EY945504       --> CATTGTCAAGAAAGACACAATCAATCACAGAGACAGAGAAAAA-GAAGCT
FD582724       --> CATTGTCAAGAAAGACACAATCAATCACAGAGACAGAGAAAAA-GAAGCT
EY919429       --> CATTATCAAGAAAAACACAATCAATCACAGAGACAGAGAAAAA-GAAGCT
EY919980       --> CATTATCAAGAAAAACACAATCAATCACAGAGACAGAGAAAAA-GAAGCT
FD566793       --> CATTATCAAGAAAAACACAATCAATAACAGAGACAGAGAAAAA-GAAGCT
EV529708       --> CATTATCAAGAAAAACACAATCAATCACAGAGACAGAGAAAAA-TAAGCT
FD552967       --> CATTATCAAGAAAAACACAATCAATCACAGAGACAGAGAAAAA-GAAGCT

               151    -    201
UN10368        --> TTTTGAGATTTACAATTTAGAGATCAATTTGAGAGGGTCTGATGCATCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY453898       <-- TTTTGAGATTTACAATTTAGAGATCAATTTGAGAGGGTCTGATGCATCTT  Raphanus sativus cv GSK3-1
FD578592       <-- TTTTGAGATTTACAATTTAGAGATCAGTTTGAGAGGGTCTGATGCATCTT  Raphanus sativus cv Rat-Tail Radish #3870
EY924299       <-- TTT-GAGATTTACAATTTAGAGATCAATTTGAGAGGGTCTGATGCATCTT  Raphanus raphanistrum subsp. landra
FD563054       <-- TTTTGAGATTTACAATTTAGAGATCAATTTGAGAGGGTCTGATGCATCTT  Raphanus sativus var. oleiformis
EY923655       <-- TTT-GAGATTTACAATTTAGAGATCAATTTGAGAGGGTCTGATGCATCTT  Raphanus raphanistrum subsp. landra
EV524800       <-- TTTTGAGATTTACAATTTAGAGATCAATTTGAGAGGGTCTGATGCATCTT  Raphanus raphanistrum subsp. maritimus
FD556716       <-- TTT-GAGATTTACAATTTAGAGATCAATTTGAGAGGGTCTGATGCATCTT  Raphanus raphanistrum subsp. landra
EY950125       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY945504       --> TTTTGAGATTTACAATTTAGAGATCAATTTGAGAGGGTCTGATGCATCTT  Raphanus sativus cv Rat-Tail Radish #3870
FD582724       --> TTTTGAGATTTACAATTTAGAGATCAGTTTGAGAGGGTCTGATGCATCTT  Raphanus sativus cv Rat-Tail Radish #3870
EY919429       --> TTT-GAGATTTACAATTTAGAGATCAATTTGAGAGGGTCTGATGCATCTT  Raphanus raphanistrum subsp. landra
EY919980       --> TTT-GAGATTTACAATTTAGAGATCAATTTGAGAGGGTCTGATGCATCTT  Raphanus raphanistrum subsp. landra
FD566793       --> TTTTGAGATTTACAATTTAGAGATCAATTTGAGAGGGTCTGATGCATCTT  Raphanus sativus var. oleiformis
EV529708       --> TTTTGAGATTTACAATTTAGAGATCAATTTGAGAGGGTCTGATGCATCTT  Raphanus raphanistrum subsp. maritimus
FD552967       --> TTT-GAGATTTACAATTTAGAGATCAATTTGAGAGGGTCTGATGCATCTT  Raphanus raphanistrum subsp. landra

               201    -    251
UN10368        --> TGACGTGATCAGGGACAGGAAGATTACAGAGGAGTGTGACTCTAGAGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY453898       <-- TGACGTGATCAGGGACAGGAAGATTACAGAGGAGTGTGACTCTAGAGGAA
FD578592       <-- TGACGTGATCAGGGACAGGAAGATTACAGAGGAGTGTGACTGTAGAGGAA
EY924299       <-- TGACGTGATCAAGGACAGGAAGATTACAGAGGAGTGTGACTCTAGAGGAA
FD563054       <-- TGACGTGATCAGGGACAGGAAGATTACAGAGGAGTGTGACTCTAGAGGAA
EY923655       <-- TGACGTGATCAAGGACAGGAAGATTACAGAGGAGTGTGACTCTAGAGGAA
EV524800       <-- TGACGTGATCAGGGACAGGAAGATTACAGAGGAGTGTGACTCTAGAGGAA
FD556716       <-- TGACGTGATCAGGGACAGGAAGATTACAGAGGAGTGTGACTCTAGAGGAA
EY950125       <-- ..................................................
EY945504       --> TGACGTGATCAGGGACAGGAAGATTACAGAGGAGTGTGACTCTAGAGGAA
FD582724       --> TGACGTGATCAGGGACAGGAAGATTACAGAGGAGTGTGACTCTAGAGGAA
EY919429       --> TGACGTGATCAAGGACAGGAAGATTACAGAGGAGTGTGACTCTAGAGGAA
EY919980       --> TGACGTGATCAAGGACAGGAAGATTACAGAGGAGTGTGACTCTAGAGGAA
FD566793       --> TGACGTGATCAGGGACAGGAAGATTACAGAGGAGTGTGACTCTAGAGGAA
EV529708       --> TGACGTGATCAGGGACAGGAAGATTACAGAGGAGTGTGACTCTAGAGGAA
FD552967       --> TGACGTGATCAGGGACAGGAAGATTACAGAGGAGTGTGACTCTAGAGGAA

               251    -    301
UN10368        --> GATATTAAGGTTCTGTTCTCTGACCCTTCCTTTGACTTCCACAGCTTAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY453898       <-- GATATTAAGGTTCTGTTCTCTGACCCTTCCTTTGACTTCCACAGCTTAAC  Raphanus sativus cv GSK3-1
FD578592       <-- GATATTAAGGTTCTTTTCTCTGACCCTTCCTTTGACTTCCACAGCTTCAC  Raphanus sativus cv Rat-Tail Radish #3870
EY924299       <-- GATATTAAGGTTCTGTTCTCTGACCCTTCCTTTGACTTCCACAGCTTAAC  Raphanus raphanistrum subsp. landra
FD563054       <-- GATATTAAGGTTCTGTTCTCTGACCCTTCCTTTGACTTCCACAGCTTAAC  Raphanus sativus var. oleiformis
EY923655       <-- GATATTAAGGTTCTGTTCTCTGACCCTTCCTTTGACTTCCACAGCTTAAC  Raphanus raphanistrum subsp. landra
EV524800       <-- GATATTAAGGTTCTTTTCTCTGACCCTTCCTTTGACTTCCACAGCTTAAC  Raphanus raphanistrum subsp. maritimus
FD556716       <-- GATATTAAGGTTCTGTTCTCTGACCCTTCCTTTGACTTCCACAGCTTAAC  Raphanus raphanistrum subsp. landra
EY950125       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY945504       --> GATATTAAGGTTCTTTTCTCTGACCCTTCCTTTGACTTCCACAGCTTCAC  Raphanus sativus cv Rat-Tail Radish #3870
FD582724       --> GATATTAAGGTTCTTTTCTCTGACCCTTCCTTTGACTTCCACAGCTTCAC  Raphanus sativus cv Rat-Tail Radish #3870
EY919429       --> GATATTAAGGTTCTGTTCTCTGACCCTTCCTTTGACTTCCACAGCTTAAC  Raphanus raphanistrum subsp. landra
EY919980       --> GATATTAAGGTTCTGTTCTCTGACCCTTCCTTTGACTTCCACAGCTTAAC  Raphanus raphanistrum subsp. landra
FD566793       --> GATATTAAGGTTCTGTTCTCTGACCCTTCCTTTGACTTCCACAGCTTAAC  Raphanus sativus var. oleiformis
EV529708       --> GATATTAAGGTTCTTTTCTCTGACCCTTCCTTTGACTTCCACAGCTTAAC  Raphanus raphanistrum subsp. maritimus
FD552967       --> GATATTAAGGTTCTGTTCTCTGACCCTTCCTTTGACTTCCACAGCTTAAC  Raphanus raphanistrum subsp. landra

               301    -    351
UN10368        --> TTCCCAAACCTGAATAGTCTTTCCTGTACTCACAGGAGATGCTTCGGCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY453898       <-- TTCCCAAACCTGAATAGTCTTTCCTGTACTCACAGGAGATGCTTCGGCGA  Raphanus sativus cv GSK3-1
FD578592       <-- TTCCCAAACCTGAATAGTCTTTCCTGTACTCACAGGAGATGCTTCGGCGA  Raphanus sativus cv Rat-Tail Radish #3870
EY924299       <-- TTCCCAAACCTGAATAGTCTTTCCTGTACTCATAGGAGATGCTTCGGCGA  Raphanus raphanistrum subsp. landra
FD563054       <-- TTCCCAAACCTGAATAGTCTTTCCTGTACTCACAGGAGATGCTTCGGCGA  Raphanus sativus var. oleiformis
EY923655       <-- TTCCCAAACCTGAATAGTCTTTCCTGTACTCATAGGAGATGCTTCGGCGA  Raphanus raphanistrum subsp. landra
EV524800       <-- TTCCCAAACCTGAATAGTCTTTCCTGTACTCACAGGAGATGCTTCGGCGA  Raphanus raphanistrum subsp. maritimus
FD556716       <-- TTCCCAAACCTGAATAGTCTTTCCTGTACTCATAGGAGATGCTTCGGCGA  Raphanus raphanistrum subsp. landra
EY950125       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY945504       --> TTCCCAAACCTGAATAGTCTTTCCTGTACTCACAGGAGATGCTTCGGCGA  Raphanus sativus cv Rat-Tail Radish #3870
FD582724       --> TTCCCAAACCTGAATAGTCTTTCCTGTACTCACAGGAGATGCTTCGGCGA  Raphanus sativus cv Rat-Tail Radish #3870
EY919429       --> TTCCCAAACCTGAATAGTCTTTCCTGTACTCATAGGAGATGCTTCGGCGA  Raphanus raphanistrum subsp. landra
EY919980       --> TTCCCAAACCTGAATAGTCTTTCCTGTACTCATAGGAGATGCTTCGGCGA  Raphanus raphanistrum subsp. landra
FD566793       --> TTCCCAAACCTGAATAGTCTTTCCTGTACTCACAGGAGATGCTTCGGCGA  Raphanus sativus var. oleiformis
EV529708       --> TTCCCAAACCTGAATAGTCTTTCCTGTACTCACAGGAGATGCTTCGGCGA  Raphanus raphanistrum subsp. maritimus
FD552967       --> TTCCCAAACCTGAATAGTCTTTCCTGTACTCATAGGAGATGCTTCGGCGA  Raphanus raphanistrum subsp. landra

               351    -    401
UN10368        --> AGACAAGGTCTCCGAGATCAGCACTCTTTATATGGTTGATCGAGAGTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY453898       <-- AGACAAGGTCTCCGAGATCAGCACTCTTTATATGGTTGATCGAGAGTTGA  Raphanus sativus cv GSK3-1
FD578592       <-- AGACGAGGTCTCCGAGATCAGCACTCTTTATATGGTTGATCGAGAGTTGA  Raphanus sativus cv Rat-Tail Radish #3870
EY924299       <-- AGACAAGGTCTCCGAGATCAGCACTCTTTATATGGTTGATCGATAGTTGA  Raphanus raphanistrum subsp. landra
FD563054       <-- AGACAAGGTCTCCGAGATCAGCACTCTTTATATGGTTGATCGAGAGTTGA  Raphanus sativus var. oleiformis
EY923655       <-- AGACAAGGTCTCCGAGATCAGCACTCTTTATATGGTTGATCGATAGTTGA  Raphanus raphanistrum subsp. landra
EV524800       <-- AGACAAGGTCTCCGAGATCAGCACTCTTTATATGGTTGATCGAGAGTTGA  Raphanus raphanistrum subsp. maritimus
FD556716       <-- AGACAAGGTCTCCGAGATCAGCACTCTTTATATGGTTGATCGATAGTTGA  Raphanus raphanistrum subsp. landra
EY950125       <-- ..........................................AGAGTTGA  Raphanus sativus cv Rat-Tail Radish #3870
EY945504       --> AGACAAGGTCTCCGAGATCAGCACTCTTTATA..................  Raphanus sativus cv Rat-Tail Radish #3870
FD582724       --> AGACGAGGTCTCCGAaat................................  Raphanus sativus cv Rat-Tail Radish #3870
EY919429       --> AGACAAGGTCTCCGAGATCAGCACTCTTTATATGGTTGATCGATAGTTGA  Raphanus raphanistrum subsp. landra
EY919980       --> AGACAAGGTCTCCGAGATCAGCACTCTTTATATGGTTGATCGATAGTTGA  Raphanus raphanistrum subsp. landra
FD566793       --> AAACAAGGTCTCCGAGATCAGCACTCTTTATATGGTTGATCGAGAGTTGA  Raphanus sativus var. oleiformis
EV529708       --> AGACAAGGTCTCCGAGATCAGCACTCTTTATATGGTTGATCGAGAGTTGA  Raphanus raphanistrum subsp. maritimus
FD552967       --> AGACAAGGTCTCCGAGATCAGCACTCTTTATATGGTTGATCGATAGTTGA  Raphanus raphanistrum subsp. landra

               401    -    451
UN10368        --> ATCCCAGCGACCCTTTTGAAGCCAGAAGCCATGTGAGCTCCCATACTTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY453898       <-- ATCCCAGCGACCCTTTTGAAGCCAGAAGCCATGTGAGCTCCCATACTTGC
FD578592       <-- ATCCCAGCGACCCTTTTGAAGCCAGAAGCCATGTGAGCTCCCATACTTGC
EY924299       <-- ATCCCAGCGACCCTTTTGAAGCCAGAAGCCATGTGAGCTCCCATACTTGC
FD563054       <-- ATCCCAGCGACCCTTTTGAAGCCAGAAGCCATGTGAGCTCCCATACTTGC
EY923655       <-- ATCCCAGCGACCCTTTTGAAGCCAGAAGCCATGTGAGCTCCCATACTTGC
EV524800       <-- ATCCCAGCGACCCTTTTGAAGCCAGAAGCCATGTGAGCTCCCATACTTGC
FD556716       <-- ATCCCAGCGACCCTTTTGAAGCCAGAAGCCATGTGAGCTCCCATACTTGC
EY950125       <-- ATCCCAGCGACCCTTTTGAAGCCAGAAGCCATGTGAGCTCCCATACTTGC
EY945504       --> ..................................................
FD582724       --> ..................................................
EY919429       --> ATCCCAGCGACCCTTTTGAAGCCAGAAGCCATGTGAGCTCCCATACTTGC
EY919980       --> ATCCCAGCGACCCTTTTGAAGCCAGAAGCCATGTGAGCTCCCATACTTGC
FD566793       --> ATCCCAGCGACCCTTTTGAAGCCAGAAGCCATGTGAGCTCCCATACTTGC
EV529708       --> ATCCCAGCGACCCTTTTGAAGCCAGAAGCCATGTGAGCTCCCATACTTGC
FD552967       --> ATCCCAGCGACCCTTTTGAAGCCAGAAGCCATGTGAGCTCCCATACTTGC

               451    -    501
UN10368        --> TAAAGACTCGGCGATCAGAGCAGATACACCACCGTGTAACACCTTGAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY453898       <-- TAAAGACTCGGCGATCAGAGCAGATACACCACCGTGTAACACCTTGAAAG  Raphanus sativus cv GSK3-1
FD578592       <-- TAAAGACTCGGCGATCAGAGCAGATACACCACCGTGTAACACCTTGAAAG  Raphanus sativus cv Rat-Tail Radish #3870
EY924299       <-- TAAAGACTCCGCGATCAGAGCAGATACACCACCGTGTAACACCTTGAAAG  Raphanus raphanistrum subsp. landra
FD563054       <-- TAAAGACTCGGCGATCAGAGCAGATACACCACCGTGTAACACCTTGAAAG  Raphanus sativus var. oleiformis
EY923655       <-- TAAAGACTCCGCGATCAGAGCAGATACACCACCGTGTAACACCTTGAAAG  Raphanus raphanistrum subsp. landra
EV524800       <-- TAAAGACTCGGCGATCAGAGCAGATACACCACCGTGTAACACCTTGAAAG  Raphanus raphanistrum subsp. maritimus
FD556716       <-- TAAAGACTCCGCGATCAGAGCAGATACACCACCGTGTAACACCTTGAAAG  Raphanus raphanistrum subsp. landra
EY950125       <-- TAAAGACTCGGCGATCAGAGCAGATACACCACCGTGTAACACCTTGAAAG  Raphanus sativus cv Rat-Tail Radish #3870
EY945504       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD582724       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY919429       --> TAAAGACTCCGCGATCAGAGCAGATACACCACCGTGTAACACCTTGAAAG  Raphanus raphanistrum subsp. landra
EY919980       --> TAAAGACTCCGCGATCAGAGCAGATACACCACCGTGTAACACCTTGAAAG  Raphanus raphanistrum subsp. landra
FD566793       --> TAAAGACTCGGCGATCAGAGCAGATACACCACCGTGTAACACCTTGAAAG  Raphanus sativus var. oleiformis
EV529708       --> TAAAGACTCGGCGATCAGAGCAGATACACCACCGTGTAACACCTTGAAAG  Raphanus raphanistrum subsp. maritimus
FD552967       --> TAAAGACTCCGCGATCAGAGCAGATACACCACCGTGTAACACCTTGAAAG  Raphanus raphanistrum subsp. landra

               501    -    551
UN10368        --> GCTGGCAGCAGATTGGAGAGACGGGAAGACGACCTGTGACACGTGTAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY453898       <-- GCTGGCAACAGATTGGAGAGACGGGAAGACGACCTGTGACACGTGTAGGA  Raphanus sativus cv GSK3-1
FD578592       <-- GCTGGCAGCAGATTGGAGAAACGGGAAGACGACCTGTGACACGTGTAGGA  Raphanus sativus cv Rat-Tail Radish #3870
EY924299       <-- GCTGGCAGCAGATTGGAGAGACGGGAAGACGACCTGTGACACGTGTAGGA  Raphanus raphanistrum subsp. landra
FD563054       <-- GCTGGCAGCAGATTGGAGAAACGGGAAGACGACCTGTTACACGTGTAGGA  Raphanus sativus var. oleiformis
EY923655       <-- GCTGGCAGCAGATTGGAGAGACGGGAAGACGACCTGTGACACGTGTAGGA  Raphanus raphanistrum subsp. landra
EV524800       <-- GCTGGCAGCAGATTGGAGAAACGGGAAGACGACCTGT.............  Raphanus raphanistrum subsp. maritimus
FD556716       <-- GCTGGCAGCAGATTGGAGAGACGGGAAGACGACCTGTGACACGTGTAGGA  Raphanus raphanistrum subsp. landra
EY950125       <-- GCTGGCAGCAGATTGGAGAAACGGGAAGACGACCTGTGACACGTGTAGGA  Raphanus sativus cv Rat-Tail Radish #3870
EY945504       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD582724       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY919429       --> GCTGGCAGCAGATTGGAGAGACGGGAAGACGACCTGTGACACGTGTAGGA  Raphanus raphanistrum subsp. landra
EY919980       --> GCTGGCAGCAGATTGGAGAGACGGGAAGACGACCTGTGACACGTGTAGGA  Raphanus raphanistrum subsp. landra
FD566793       --> GCTGGCAGCAAATTGGAAAAACGGGAAGACGACCTGTTACACGTGTAGGA  Raphanus sativus var. oleiformis
EV529708       --> GCTGGCAGCAGATTGGAGAAACGGGAAGACGACCTGTGACACGTGTAGGA  Raphanus raphanistrum subsp. maritimus
FD552967       --> GCTGGCAGCAGATTGGAGAGACGGGAAGACGACCTGTGACACGTGTAGGA  Raphanus raphanistrum subsp. landra

               551    -    601
UN10368        --> GATAACTCATCGATCTCGAAACCTAATGCGTAGAGCGGAGGGTCTAAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY453898       <-- GATAACTCATCGATCTCGAAACCTAATGCGTAGAGCGGAGGGTCTAAAGC
FD578592       <-- GATAAATCATAGATCTCGAAACCTAATGCGTAGAGCGGAGGGTCTAAAGC
EY924299       <-- GATAACTCATCGATCTCGAAACCTAATGCGTAGAGCGGAGGGTCTAAAGC
FD563054       <-- GATAACTCATCGATCTCGAAACCTAATGCGTAGAGCGGAGGGTCTAAAGC
EY923655       <-- GATAACTCATCGATCTCGAAACCTAATGCGTAGAGCGGAGGGTCTAAAGC
EV524800       <-- ..................................................
FD556716       <-- GATAACTCATCGATCTCGAAACCTAATGCGTAGAGCGGAGGGTCTAAAGC
EY950125       <-- GATAAATCATCGATCTCGAAACCTAATGCGTAGAGCGGAGGGTCTAAAGC
EY945504       --> ..................................................
FD582724       --> ..................................................
EY919429       --> GATAACTCATCGATCTCGAAACCTAATGCGTAGAGCGGAGGGTCTAAAGC
EY919980       --> GATAACTCATCGATCTCGAAACCTAATGCGTAGAGCGGAGGGTCTAAAGC
FD566793       --> GATAACTCATCGATCTCGAAACCTAATGCGTAGAGCGGAGGGTCTAAAGC
EV529708       --> GATAACTCATCGATCTCGAAACCTAATGCGTAGAGCGGAGGGTCTAAAGC
FD552967       --> GATAACTCATCGATCTCGAAACCTAATGCGTAGAGCGGAGGGTCTAAAGC

               601    -    651
UN10368        --> TTTGGTCTTGGACGATGCAGAAACCATTTTGTGTTCCTCTGTTTCAGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY453898       <-- TTTGGTCTTGGACGATGCAGAAACCATTTTGTGTTCCTCTGTTTCAGAGA
FD578592       <-- ..................................................
EY924299       <-- TTTGGTCTTGGACGATGCAGAAACCATTTTGTGTTCCTCTGTTTCAGAGA
FD563054       <-- TTTGGTCTTGGACGATGCAGAAACCATTTTGTGTTCCTCTGTTTCAGAGA
EY923655       <-- TTTGGTCTTGGACGATGCAGAAACCATTTTGTGTTCCTCTGTTTCAGAGA
EV524800       <-- ..................................................
FD556716       <-- TTTGGTCTTGGACGATGCAGAAACCATTTTGTGTTCCTCTGTTTCAGAGA
EY950125       <-- TTTGGTCTTGGACGATGCAGAAACCATTTTGTGTTCCTCTGTTTCTGAGA
EY945504       --> ..................................................
FD582724       --> ..................................................
EY919429       --> TTTGGTCTTGGACGATGCAGAAACCATTTTGTGTTCCTCTGTTTCAGAGA
EY919980       --> TTTGGTCTTGGACGATGCAGAAACCATTTTGTGTTCCTCTGTTTCAGAGA
FD566793       --> TTTGGTCTTGGACGATGCAGAAACCATTTTGTGTTCCTCTGTTT......
EV529708       --> TTTGGTCTTGGACGATGCAGAAACCATTTTGTGTTCCc............
FD552967       --> TTTGGTCTTGGACGATGCAGAAACCATTTTGTGTTCCTCTGTTTCAGAGA

               651    -    701
UN10368        --> AAGAGAGAGGAGGTTAGGTGGGTGAAGTTCTAAAAGATGATAAGAGAGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY453898       <-- AAGAGAGAGGAGGTTAGGTGGGTGAAGT......................
FD578592       <-- ..................................................
EY924299       <-- AAGAGAGAGGAGGTTAGGTGGGTGAAGTTCTAAAAGATGATAAGAGAGGT
FD563054       <-- AAGAGAGAGGAGGTTAGGTAGGTGAAGTTCTAAAAGATGATAAGAGAGGT
EY923655       <-- AAGAGAGAGGAGGTTAGGTGGGTGAAGTTCTAAAAGATGATAAGAGAGGT
EV524800       <-- ..................................................
FD556716       <-- AAGAGAGAGGAGGTTAGGTGGGTGAAGTTCTAAAAGATGATAAGAGAGGT
EY950125       <-- AAGAGAGAGGAGGTTAGGTAGGTGAAGTTCTAAGAGATGATAAGAGAGGT
EY945504       --> ..................................................
FD582724       --> ..................................................
EY919429       --> AAGAGAGAGGAGGTTAGGTGGGTGAAGTTCTAAAAGATGATAAGAGAGGT
EY919980       --> AAGAGAGAGGAGGTTAGGTGGGTGAAGTTCTAAAAGATGATAAG......
FD566793       --> ..................................................
EV529708       --> ..................................................
FD552967       --> AAGAGAGAGGAGGTTAGGTGGGTGAAGTTCTAAAAGATGATAAGAGAGGT

               701    -    751
UN10368        --> TGAGAAAAAA
                   ~~~~~~~~~~
FY453898       <-- ..........
FD578592       <-- ..........
EY924299       <-- TGAGAAAAAA
FD563054       <-- TGAGAAAAAA
EY923655       <-- TGAGAAAAAA
EV524800       <-- ..........
FD556716       <-- TGAGAAAAAA
EY950125       <-- TGAGAAAAAA
EY945504       --> ..........
FD582724       --> ..........
EY919429       --> TGAGAAAAAA
EY919980       --> ..........
FD566793       --> ..........
EV529708       --> ..........
FD552967       --> TGAGAAAAAA