1      -     51
UN10403        --> GGGATAGCACCGATCACAATATAC--TATACTTTTAAAGGTAATTTGTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544400       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV540738       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976558       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX909765       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV543472       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX769362       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW737311       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY917656       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY917777       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV548785       --> GGGATAGCACCGATCACAATATAC--TATACTTTTAAAGGTAATTTGTAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX747215       --> GGGATAGCACCGATCACAATATACAATATACTTTTAAAGGTAATTTGTAA  Raphanus raphanistrum subsp. maritimus
EV536244       --> .GGATAGCACCGATCACAATATAC--AATACTTTTAAAGGTAATTTGTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV552476       --> .GGATAGCACCGATCACAATATAC--AATACTTTTAAAGGTAATTTGTAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW722967       --> .GGATAGCACCGATCACAATATAC--TATACTTTTAAAGGTAATTTGTAA  Raphanus sativus cv Early Scarlet Globe
EW723526       --> .GGATAGCACCGATCACAATATAC--TATACTTTTAAAGGTAATTTGTAA  Raphanus sativus cv Early Scarlet Globe
EW725692       --> .GGATAGCACCGATCACAATATACAATATACTTTTAAAGGTAATTTGTAA  Raphanus sativus cv Early Scarlet Globe
EX757733       --> .GGATAGCACCGATCACAATATAC--TCTACTTTTAAAGGTAACTTGTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX894714       --> .GGATAGCACCGATCACAATATACAATATACTTTTAAAGGTAATTTGTAA  Raphanus sativus cv Early Scarlet Globe
EY900162       --> .GGATAGCACCGATCACAATATACAATATACTTTTAAAGGTAATTTGTAA  Raphanus raphanistrum subsp. maritimus
EY921669       --> .GGATAGCACCGATCACAATATAC--TATACTTTTAAAGGTAATTTGTAA  Raphanus raphanistrum subsp. landra
FD568338       --> .GGATAGCACCGATCACAATATAC--TATACTTTTAAAGGTAATTTGTAA  Raphanus sativus cv Early Scarlet Globe
FD569379       --> .GGATAGCACCGATCACAATATACAATATACTTTTAAAGGTAATTTGTAA  Raphanus sativus cv Early Scarlet Globe
FD962353       --> .GGATAGCACCGATCACAATATACAATATACTTTTAAAGGTAATTTGTAA  Raphanus raphanistrum subsp. maritimus
FD964617       --> ......GCACCGATCACAATATACAATATACTTTTAAAGGTAATTTGTAA  Raphanus raphanistrum subsp. maritimus
FY441978       --> .............................ACTTTTAA-GGTAATTTGTAA  Raphanus sativus cv GSK3-1
FY441432       --> .......................................ggtATTTGTA-  Raphanus sativus cv GSK3-1
FY441586       --> .......................................ggtATTTGTA-  Raphanus sativus cv GSK3-1
FY441597       --> .......................................ggtATTTGTA-  Raphanus sativus cv GSK3-1
EW724441       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV547636       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY921527       --> ..................................................  Raphanus raphanistrum subsp. landra
EW732637       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY931057       --> ..................................................  Raphanus sativus var. oleiformis

               51     -    101
UN10403        --> GATTGATCTAACAGCAAACAAAGATGGCCCAAAAGGTGGATGCACAAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544400       <-- ..................................................
EV540738       <-- ..................................................
FD976558       <-- ..................................................
EX909765       <-- ..................................................
EV543472       <-- ..................................................
EX769362       <-- ..................................................
EW737311       <-- ..................................................
EY917656       <-- ..................................................
EY917777       <-- ..................................................
EV548785       --> GATTGATCTAACAGCAAACAAAGATGGCCCAAAAGGTGGATGCACAAGGA
EX747215       --> GATTGATCTAACAGCAAACAAAGATGGCCCAAAAGGTGGATGCACAAGGA
EV536244       --> GATTGATCTAACAGCAAACAAAGATGGCCCAAAAGGTGGATGCACAAGGA
EV552476       --> GATTGATCTAACAGCAAACAAAGATGGCCCAAAAGGTGGATGCACAAGGA
EW722967       --> GATTGATCTAGCAGCAAACAAAGATGGCCCAAAAGGTGGATGCACAAGGA
EW723526       --> GATTGATCTAACAGCAAACAAAGATGGCCCAAAAGGTGGATGCACAAGGA
EW725692       --> GATTGATCTAACAGCAAACAAAGATGGCCCAAAAGGTGGATGCACAAGGA
EX757733       --> GATTGATCTAACAGCAAACAAAGATGGCCCAAAAGGTGGATGCACAAGGA
EX894714       --> GATTGATCTAACAGCAAACAAAGATGGCCCAAAAGGTGGATGCACAAGGA
EY900162       --> GATTGATCTAACAGCAAACAAAGATGGCCCAAAAGGTGGATGCACAAGGA
EY921669       --> GATTGATCTAACAGCAAACAAAGATGGCCCAAAAGGTGGATGCACAAGGA
FD568338       --> GATTGATCTAACAGCAAACAAAGATGGCCCAAAAGGTGGATGCACAAGGA
FD569379       --> GATTGATCTAACAGCAAACAAAGATGGCCCAAAAGGTGGATGCACAAGGA
FD962353       --> GATTGATCTAACAGCAAACAAAGATGGCCCAAAAGGTGGATGCACAAGGA
FD964617       --> GATTGATCTAACAGCAAACAAAGATGGCCCAAAAGGTGGATGCACAAGGA
FY441978       --> GATTGATCTAACAGCAAACAAAGATGGCCCAAAAGGTGGATGCACAAGGA
FY441432       --> GATTGATCTA-CAGCAAACAAAGATGGCCCAAAAGGTGGATGCACAAGGA
FY441586       --> GATTGATCTA-CAGCAAA-AAAGATGGCCCAAAAGGTGGATGCACAAGGA
FY441597       --> GATTGATCTA-CAGCAAACAAAGATGGCCCAAAAGGTGGATGCACAAGGA
EW724441       --> ........TAACAGCAAACAAAGACGGCCCAAAAGGTGGATGCACAAGGA
EV547636       --> .........AACAGCAAACAAAGATGGCCCAAAAGGTGGATGCACAAGGA
EY921527       --> ..................................................
EW732637       --> ..................................................
EY931057       --> ..................................................

               101    -    151
UN10403        --> GGGAAAGGAGGCAACCAATGGGACGATGGATCCGAACACGATGCAGTGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544400       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV540738       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976558       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX909765       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV543472       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX769362       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW737311       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY917656       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY917777       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV548785       --> GGGAAAGGAGGCAACCAATGGGACGATGGATCCGAACACGATGCAGTGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX747215       --> GGGAAAGGAGGCAACCAATGGGACGATGGATCCGAACACGATGCAGTGAC  Raphanus raphanistrum subsp. maritimus
EV536244       --> GGGAAAGGAGGCAACCAATGGGACGATGGATCCGAACACGATGCAGTGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV552476       --> GGGAAAGGAGGCAACCAATGGGACGATGGATCCGAACACGATGCAGTGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW722967       --> GGGAAAGGAGGAAACCAATGGGACGATGGATCCGAACACGATGCAGTGAC  Raphanus sativus cv Early Scarlet Globe
EW723526       --> GGGAAAGGAGGAAACCAATGGGACGATGGATCCGAACACGATGCAGTGAC  Raphanus sativus cv Early Scarlet Globe
EW725692       --> GGGAAAGGAGGCAACCAATGGGACGATGGATCCGAACACGATGCAGTGAC  Raphanus sativus cv Early Scarlet Globe
EX757733       --> GGGAAAGGAGGCAACCAATGGGACGATGGATCCGAACACGATGCAGTGAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX894714       --> GGGAAAGGAGGCAACCAATGGGACGATGGATCCGAACACGATGCAGTGAC  Raphanus sativus cv Early Scarlet Globe
EY900162       --> GGGAAAGGAGGCAACCAATGGGACGATGGATCCGAACACGATGCAGTGAC  Raphanus raphanistrum subsp. maritimus
EY921669       --> GGGAAAGGAGGCAACCAATGGGACGATGGATCCGAACACGATGCAGTGAC  Raphanus raphanistrum subsp. landra
FD568338       --> GGGAAAGGAGGAAACCAATGGGACGATGGATCCGAACACGATGCAGTGAC  Raphanus sativus cv Early Scarlet Globe
FD569379       --> GGGAAAGGAGGCAACCAATGGGACGATGGATCCGAACACGATGCAGTGAC  Raphanus sativus cv Early Scarlet Globe
FD962353       --> GGGAAAGGAGGCAACCAATGGGACGATGGATCCGAACACGATGCAGTGAC  Raphanus raphanistrum subsp. maritimus
FD964617       --> GGGAAAGGAGGCAACCAATGGGACGATGGATCCGAACACGATGCAGTGAC  Raphanus raphanistrum subsp. maritimus
FY441978       --> GGGAAAGGAGGAAACCAATGGGACGATGGATCCGAACACGATGCAGTGAC  Raphanus sativus cv GSK3-1
FY441432       --> GGGAAAGGAGGAAACCAATGGGACGATGGATCCGAACACGATGCAGTGAC  Raphanus sativus cv GSK3-1
FY441586       --> GGGAAAGGAGGAAACCAATGGGACGATGGATCCGAACACGATGCAGTGAC  Raphanus sativus cv GSK3-1
FY441597       --> GGGAAAGGAGGAAACCAATGGGACGATGGATCCGAACACGATGCAGTGAC  Raphanus sativus cv GSK3-1
EW724441       --> GGGAAAGGAGGAAACCAATGGGACGATGGATCCGAACACGATGCAGTGAC  Raphanus sativus cv Early Scarlet Globe
EV547636       --> GGGAAAGGAGGCAACCAATGGGACGATGGATCCGAACACGATGCAGTGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY921527       --> ..................................................  Raphanus raphanistrum subsp. landra
EW732637       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY931057       --> ..................................................  Raphanus sativus var. oleiformis

               151    -    201
UN10403        --> CAAGATTCAGGTCGGAGCAGGTGGAATCGGCATTCAATACGTTAAGTTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544400       <-- ..................................................
EV540738       <-- ..................................................
FD976558       <-- ..................................................
EX909765       <-- ..................................................
EV543472       <-- ..................................................
EX769362       <-- ..................................................
EW737311       <-- ..................................................
EY917656       <-- ..................................................
EY917777       <-- ..................................................
EV548785       --> CAAGATCCAGGTCGGAGCAGGTGGAATCGGCATTCAATACGTTAAGTTCG
EX747215       --> CAAGATTCAGGTCGGAGCAGGTGGAATCGGCATTCAATACGTTAAGT-CG
EV536244       --> CAAGATTCAGGTCGGAGCAGGTGGAATCGGCATTCAATACGTTAAGTTCG
EV552476       --> CAAGATTCAGGTCGGAGCAGGTGGAATCGGCATTCAATACGTTAAGTTCG
EW722967       --> CAAGATTCAGGTCGGAGCAGGTGGAATCGGCATTCAATACGTTAAGTTCG
EW723526       --> CAAGATTCAGGTCGGAGCAGGTGGAATCGGCATTCAATACGTTAAGTTCG
EW725692       --> CAAGATTCAGGTCGGAGCAGGTGGAATCGGCATTCAATACGTTAAGTTCG
EX757733       --> CAAGATTCAGGTCGGAGCAGGTGGAATCGGCATTCAATACGTTAAGTTCG
EX894714       --> CAAGATTCAGGTCGGAGCAGGTGGAATCGGCATTCAATACGTTAAGTTCG
EY900162       --> CAAGATTCAGGTCGGAGCAGGTGGAATCGGCATTCAATACGTTAAGTTCG
EY921669       --> CAAGATTCAGGTCGGAGCAGGTGGAATCGGCATTCAATACGTT----TCG
FD568338       --> CAAGATTCAGGTCGGAGCAGGTGGAATCGGCATTCAATACGTTAAGTTCG
FD569379       --> CAAGATTCAGGTCGGAGCAGGTGGAATCGGCATTCAATACGTTAAGTTCG
FD962353       --> CAAGATTCGGGTCGGAGCAGGTGGAATCGGCATTCAATACGTTAAGTTCG
FD964617       --> CAAGATTCAGGTCGGAGCAGGTGGAATCGGCATTCAATACGTTAAGTTCG
FY441978       --> CAAGATTCAGGTCGGAGCAGGTGGAATCGGCATTCAATACGTTAAGTTCG
FY441432       --> CAAGATTCAGGTCGGAGCAGGTGGAATCGGCATTCAATACGTTAAGTTCG
FY441586       --> CAAGATTCAGGTCGGAGCAGGTGGAATCGGCATTCAATACGTTAAGTTCG
FY441597       --> CAAGATTCAGGTCGGAGCAGGTGGAATCGGCATTCAATACGTTAAGTTCG
EW724441       --> CAAGATTCAGGTCGGAGCAGGTGGAATCGGCATTCAATACGTTAAGTTCG
EV547636       --> CAAGATTCAGGCCGGAGCAGGTGGAATCGGCATTCAATACGTTAAGTTCG
EY921527       --> ..................................................
EW732637       --> ..................................................
EY931057       --> ..................................................

               201    -    251
UN10403        --> ATTATGTCAAGAACGGACAAACCGAAGAGGCCCCTCTTCGCGGTATCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544400       <-- ..................................................
EV540738       <-- ..................................................
FD976558       <-- ..................................................
EX909765       <-- ..................................................
EV543472       <-- ..................................................
EX769362       <-- ..................................................
EW737311       <-- ..................................................
EY917656       <-- ..................................................
EY917777       <-- ..................................................
EV548785       --> ATTATGTCAAGAACGGACAAACCGAAGAGGCCCCTCTTCGCGGTATCAAA
EX747215       --> ATTATGTCAAGAACGGACAAACCGAAGAGGCCCCTCTTCGCGGTATCAAA
EV536244       --> ATTATGTCAAGAACTGACAAACCGAAGAGGCCCCTCTTCGCGGTATCAAA
EV552476       --> ATTATGTCAAGAACGGACAAACCGAAGAGGCCCCTCTTCGCGGTATCAAA
EW722967       --> ATTATGTCAAGAACGGACAAACCGAAGAGGCCCCTCTTCGCGGTATCAAA
EW723526       --> ATTATGTCAAGAACGGACAAACCGAAGAGGCCCCTCTTCGCGGTATCAAA
EW725692       --> ATTATGTCAAGAACGGACAAACCGAAGAGGCCCCTCTTCGCGGTATCAAA
EX757733       --> ATTATGTCAAGAACGGACAAACCGAAGAGGCCCCTCTTCGCGGTATCAAA
EX894714       --> ATTATGTCAAGAACGGACAAACCGAAGAGGCCCCTCTTCGCGGTATCAAA
EY900162       --> ATTATGTCAAGAACGGACAAACCGAAGAGGCCCCTCTTCGCGGTATCAAA
EY921669       --> ATTATGTCAAGAACGGACAAACCGAAGAGGCCCCTCTTCGCGGTATCAAA
FD568338       --> ATTATGTCAAGAACGGACAAACCGAAGAGGCCCCTCTTCGCGGTATCAAA
FD569379       --> ATTATGTCAAGAACGGACAAACCGAAGAGGCCCCTCTTCGCGGTATCAAA
FD962353       --> ATTATGTCAAGAACGGACAAACCGAAGAGGCCCCTCTTCGCGGTATCAAA
FD964617       --> ATTATGTCAAGAACGGACAAACCGAAGAGGCCCCTCTTCGCGGTATCAAA
FY441978       --> ATTATGTCAAGAACGGACAAACCGAAGAGGCCCCTCTTCGCGGTATCAAA
FY441432       --> ATTATGTCAAGAACGGACAAACCGAAGAGGCCCCTCTTCGCGGTATCAAA
FY441586       --> ATTATGTCAAGAACGGACAAACCGAAGAGGCCCCTCTTCGCGGTATCAAA
FY441597       --> ATTATGTCAAGAACGGACAAACCGAAGAGGCCCCTCTTCGCGGTATCAAA
EW724441       --> ATTATGTCAAGAACGGACAAACCGAAGAGGCCCCTCTTCGCGGTATCAAA
EV547636       --> ATTATGTCAAGAACGGACAAACCGAAGAGGCCCCTCTTCGCGGTATCAAA
EY921527       --> ..................................................
EW732637       --> ..................................................
EY931057       --> ..................................................

               251    -    301
UN10403        --> GGCCGTAGTATTCCAGCTGATCCTTTTGTGATTAACCATCCTGAGGAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544400       <-- ............................................GGAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV540738       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976558       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX909765       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV543472       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX769362       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW737311       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY917656       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY917777       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV548785       --> GGCCGTAGTATTCCAGCTGATCCTTTTGTGATTAACCATCCTGAGGAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX747215       --> GGCCGTAGTATTCCAGCTGATCCTTTTGTGATAAACCATCCTGAGGAGCA  Raphanus raphanistrum subsp. maritimus
EV536244       --> GGCCGTAGTATTCCAGCTGATCCTTTTGTGATTAACCATCCTGAGGAGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV552476       --> GGCCGTAGTATTCCAGCTGATCCTTTTGTGATTAACCATCCTGAGGAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW722967       --> GGCCGTAGTATTCCAGCTGTTCCTTTTGTGATTAACCATCCTGAGGAGCA  Raphanus sativus cv Early Scarlet Globe
EW723526       --> GGCCGTAGTATTCCAGCTGTTCCTTTTGTGATTAACCATCCTGAGGAGCA  Raphanus sativus cv Early Scarlet Globe
EW725692       --> GGCCGTAGTATTCCAGCTGATCCTTTTGTGATAAACCATCCTGAGGAGCA  Raphanus sativus cv Early Scarlet Globe
EX757733       --> GGCCGTAGTATTCCAGCTGATCCTTTTGTGATTAACCATCCTGAGGAGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX894714       --> GGCCGTAGTATTCCAGCTGATCCTTTTGTGATAAACCATCCTGAGGAGCA  Raphanus sativus cv Early Scarlet Globe
EY900162       --> GGCCGTAGTATTCCAGCTGATCCTTTTGTGATAAACCATCCTGAGGAGCA  Raphanus raphanistrum subsp. maritimus
EY921669       --> GGCCGTAGTATTCCAGCTGATCCTTTTGTGATTAACCATCCTGAGGAGCA  Raphanus raphanistrum subsp. landra
FD568338       --> GGCCGTAGTATTCCAGCTGTTCCTTTTGTGATTAACCATCCTGAGGAGCA  Raphanus sativus cv Early Scarlet Globe
FD569379       --> GGCCGTAGTATTCCAGCTGATCCTTTTGTGATAAACCATCCTGAGGAGCA  Raphanus sativus cv Early Scarlet Globe
FD962353       --> GGCCGTAGTATTCCAGCTGATCCTTTTGTGATAAACCATCCTGAGGAGCA  Raphanus raphanistrum subsp. maritimus
FD964617       --> GGCCGTAGTATTCCAGCTGATCCTTTTGTGATAAACCATCCTGAGGAGCA  Raphanus raphanistrum subsp. maritimus
FY441978       --> GGCCGTAGTATTCCAGCTGTTCCTTTTGTGATTAACCATCCTGAGGAGCA  Raphanus sativus cv GSK3-1
FY441432       --> GGCCGTAGTATTCCAGCTGTTCCTTTTGTGATTAACCATCCTGAGGAGCA  Raphanus sativus cv GSK3-1
FY441586       --> GGCCGTAGTATTCCAGCTGTTCCTTTTGTGATTAACCATCCTGAGGAGCA  Raphanus sativus cv GSK3-1
FY441597       --> GGCCGTAGTATTCCAGCTGTTCCTTTTGTGATTAACCATCCTGAGGAGCA  Raphanus sativus cv GSK3-1
EW724441       --> GGCCGTAGTATTCCATCTGTTCCTTTTGTGATTAACCATCCTGAGGAGCA  Raphanus sativus cv Early Scarlet Globe
EV547636       --> GGCCGTAGTATTCCAGCTGATCCTTTTGTGATTAACCATCCTGAGGAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY921527       --> ..................................................  Raphanus raphanistrum subsp. landra
EW732637       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY931057       --> ..................................................  Raphanus sativus var. oleiformis

               301    -    351
UN10403        --> TCTAGTTTCTGTAGAAGGTTGGTATAATCCTGACGGTCTCATTCAAGGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544400       <-- TCTAGTTTCTGTAGAAGGTTGGTATAATCCTGACGGTCTCATTCAAGGGC
EV540738       <-- ......TTCTGTAGAAGGTTGGTATAATC-TGACGGTCTCACTCAAGGGC
FD976558       <-- ..................................................
EX909765       <-- ..................................................
EV543472       <-- ..................................................
EX769362       <-- ..................................................
EW737311       <-- ..................................................
EY917656       <-- ..................................................
EY917777       <-- ..................................................
EV548785       --> TCTAGTTTCTGTAGAAGGTTGGTATAATCCTGACGGTCTCATTCAAGGGC
EX747215       --> TCTAGTTTCTGTAGAAGGTTGGTATAATCCTGACGGTCTCATTCAAGGGC
EV536244       --> TCTAGTTTCTGTAGAAGGTTGGTATAATCCTGACGGTCTCACTCAAGGGC
EV552476       --> TCTAGTTTCTGTAGAAGGTTGGTATAATCCTGACGGTCTCATTCAAGGGC
EW722967       --> TCTAGTTTCTGTAGAAGGTTGGTATAATCCTGACGGTCTCATTCAAGGGC
EW723526       --> TCTAGTTTCTGTAGAAGGTTGGTATAATCCTGACGGTCTCATTCAAGGGC
EW725692       --> TCTAGTTTCTGTAGAAGGTTGGTATAATCCTGACGGTCTCATTCAAGGGC
EX757733       --> TCTAGTTTCTGTAGAAGGTTGGTATAATTCTGACGGTCTGATTCAAGGGC
EX894714       --> TCTAGTTTCTGTAGAAGGTTGGTATAATCCTGACGGTCTCATTCAAGGGC
EY900162       --> TCTAGTTTCTGTAGAAGGTTGGTATAATCCTGACGGTCTCATTCAAGGGC
EY921669       --> TCTAGTTTCTGTAGAAGGTTGGTATAATCCTGACGGTCTCATTCAAGAGC
FD568338       --> TCTAGTTTCTGTAGAAGGTTGGTATAATCCTGACGGTCTCATTCAAGGGC
FD569379       --> TCTAGTTTCTGTAGAAGGTTGGTATAATCCTGACGGTCTCATTCAAGGGC
FD962353       --> TCTAGTTTCTGTAGAAGGTTGGTATAATCCTGACGGTCTCATTCAAGGGC
FD964617       --> TCTAGTTTCTGTAGAAGGTTGGTATAATCCTGACGGTCTCATTCAAGGGC
FY441978       --> TCTAGTTTCTGTAGAAGGTTGGTATAATCCTGACGGTCTCATTCAAGGGC
FY441432       --> TCTAGTTTCTGTAGAAGGTTGGTATAATCCTGACGGTCTCATTCAAGGGC
FY441586       --> TCTAGTTTCTGTAGAAGGTTGGTATAATCCTGACGGTCTCATTCAAGGGC
FY441597       --> TCTAGTTTCTGTAGAAGGTTGGTATAATCCTGACGGTCTCATTCAAGGGC
EW724441       --> TCTAGTTTCTGTAGAAGGTTGGTATAATCCTGACGGTCTCATTCAAGGGC
EV547636       --> TCTAGTTTCTGTAGAAGGTTGGTATAATCCTGACGGTCTCATTCAAGGGC
EY921527       --> ..................................................
EW732637       --> ..................................................
EY931057       --> ..................................................

               351    -    401
UN10403        --> TTAAGTTCAACTCCAACAAGAAGTCTTCTGATGTTATTGGATACAACGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544400       <-- TTAAGTTCAACTCCAACAAGAAGTCTTCTGATGTCATTGGATACAACGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV540738       <-- TTAAGTTCAACTCCAACAAGAAGTCTTCTGATGTCATTGGATACAACGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976558       <-- .................AAGAAGTCTTCTGATGTCATTGGATACAACGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX909765       <-- .....................................TGGATACAACGAT  Raphanus sativus cv Rat-Tail Radish #3870
EV543472       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX769362       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW737311       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY917656       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY917777       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV548785       --> TTAAGTTCAACTCCAACAAGAAGTCTTCTGATGTCATTGGATACAACGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX747215       --> TTAAGTTCAACTCCAACAAGAAGTCTTCTGATGTTATTGGATACAACGAT  Raphanus raphanistrum subsp. maritimus
EV536244       --> TTAAGTTCAACTCCAACAAGAAGTCTTCTGATGTCATTGGATACAACGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV552476       --> TTAAGTTCAACTCCAACAAGAAGTCTTCTGATGTCATTGGATACAACGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW722967       --> TTAAGTTCAACTCCAACAAGAAGTCTTCTGATGTTATTGGATACAACGAT  Raphanus sativus cv Early Scarlet Globe
EW723526       --> TTAAGTTCAACTCCAACAAGAAGTCTTCTGATGTTATTGGATACAACGAT  Raphanus sativus cv Early Scarlet Globe
EW725692       --> TTAAGTTCAACTCCAACAAGAATTCTTCTGATGTTATTGGATACAACGAT  Raphanus sativus cv Early Scarlet Globe
EX757733       --> TTAAGTTCAACTCCAACAAGAAGTCTTCTGATGTCATTGGATACAACGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX894714       --> TTAAGTTCAACTC-AACAAGAAGTCTTCTGATGTTATTGGATACAACGAT  Raphanus sativus cv Early Scarlet Globe
EY900162       --> TTAAGTTCAACTCCAACAAGAAGTCTTCTGATGTTATTGGATACAACGAT  Raphanus raphanistrum subsp. maritimus
EY921669       --> TTAAGTTCAACTCCAACAAGAAGTCTTCTGATGTCATTGGATACAACGAT  Raphanus raphanistrum subsp. landra
FD568338       --> TTAAGTTCAACTCCAACAAGAAGTCTTCTGATGTTATTGGATACAACGAT  Raphanus sativus cv Early Scarlet Globe
FD569379       --> TTAAGTTCAACTCCAACAAGAAGTCTTCTGATGTTATTGGATACAACGAT  Raphanus sativus cv Early Scarlet Globe
FD962353       --> TTAAGTTCAACTCCAACAAGAAGTCTTCTGATGTTATTGGATACAACGAT  Raphanus raphanistrum subsp. maritimus
FD964617       --> TTAAGTTCAACTCCAACAAGAAGTCTTCTGATGTTATTGGATACAACGAT  Raphanus raphanistrum subsp. maritimus
FY441978       --> TTAAGTTCAACTCCAACAAGAAGTCTTCTGATGTTATTGGATACAACGAT  Raphanus sativus cv GSK3-1
FY441432       --> TTAAGTTCAACTCCAACAAGAAGTCTTCTGATGTTATTGGATACAACGAT  Raphanus sativus cv GSK3-1
FY441586       --> TTAAGTTCAACTCCAACAAGAAGTCTTCTGATGTTATTGGATACAACGAT  Raphanus sativus cv GSK3-1
FY441597       --> TTAAGTTCAACTCCAACAAGAAGTCTTCTGATGTTATTGGATACAACGAT  Raphanus sativus cv GSK3-1
EW724441       --> TTAAGTTCAACTCCAACAAGAAGTCTTCTGATGTTATTGGATACAACGAT  Raphanus sativus cv Early Scarlet Globe
EV547636       --> TTAAGTTCAACTCCAACAAGAAGTCTTCTGATGTCATTGGATACAACGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY921527       --> ..................................................  Raphanus raphanistrum subsp. landra
EW732637       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY931057       --> ..................................................  Raphanus sativus var. oleiformis

               401    -    451
UN10403        --> GGTACTTCATTCACTCTCCAAGTTCAAGACAAGAAGATCGTTGGTTTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544400       <-- GGTACTTCATTCACTCTCCAAGTTCAAGACAAGAAGATCGTTGGTTTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV540738       <-- GGTACTTCATTCACTCTCCAAGTTCAAGACAAGAAGATCGTTGGTTTTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976558       <-- GGTACTTCATTCACTCTCCAAGTTCAAGACAAGAAGATCGTTGGTTTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX909765       <-- GGTACTTCATTCACTCTCCAAGTTCAAGACAAGAAGATCGTTGGTTTTCA  Raphanus sativus cv Rat-Tail Radish #3870
EV543472       <-- .........TTCACTCTCCAAGTTCAAGACAAGAAGATCGTTGGTTTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX769362       <-- .......tcaTCACTCTCCAAGTTCAAGACAAGAAGATCGTTGGTTTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW737311       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY917656       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY917777       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV548785       --> GGTACTTCATTCACTCTCCAAGTTCAAGACAAGAAGATCGTTGGTTTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX747215       --> GGTACCTCATTCACTCTCCAAGTTCAAGACAAGAAGATCGTTGGTTTTCA  Raphanus raphanistrum subsp. maritimus
EV536244       --> GGTACTTCATTCACTCTCCAAGTTCAAGACAAGAAGATCGTTGGTTTTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV552476       --> GGTACTTCATTCACTCTCCAAGTTCAAGACAAGAAGATCGTTGGTTTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW722967       --> GGTACTTCATTCACTCTCCAAGTTCAAGACAAGAAGATCGTTGGTTTTCA  Raphanus sativus cv Early Scarlet Globe
EW723526       --> GGTACTTCATTCACTCTCCAAGTTCAAGACAAGAAGATCGTTGGTTTTCG  Raphanus sativus cv Early Scarlet Globe
EW725692       --> GGTACCTCATTCACTCTCCAAGTTCAAGACAAGAAGATCGTTGGTTTTCA  Raphanus sativus cv Early Scarlet Globe
EX757733       --> GGTACTTCATTCACTCTCCAAGTTCAAGACAAGAAGATCGTTGGTTTTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX894714       --> GGTACCTCATTCACTCTCCAAGTTCAAGACAAGAAGATCGTTGGTTTTCA  Raphanus sativus cv Early Scarlet Globe
EY900162       --> GGTACCTCATTCACTCTCCAAGTTCAAGACAAGAAGATCGTTGGTTTTCA  Raphanus raphanistrum subsp. maritimus
EY921669       --> GGTACTTCATTCACTCTCCAAGTTCAAGACAAGAAGATCGTTGGTTTTCA  Raphanus raphanistrum subsp. landra
FD568338       --> GGTACTTCATTCACTCTCCAAGTTCAAGACAAGAAGATCGTTGGTTTTCA  Raphanus sativus cv Early Scarlet Globe
FD569379       --> GGTACCTCATTCACTCTCCAAGTTCAAGACAGGAAGATCGTTGGTTTTCA  Raphanus sativus cv Early Scarlet Globe
FD962353       --> GGTACCTCATTCACTCTCCAAGTTCAAGACAAGAAGATCGTTGGTTTTCA  Raphanus raphanistrum subsp. maritimus
FD964617       --> GGTACCTCATTCACTCTCCAAGTTCAAGACAAGAAGATCGTTGGTTTTCA  Raphanus raphanistrum subsp. maritimus
FY441978       --> GGTACTTCATTCACTCTCCAAGTTCAAGACAAGAAGATCGTTGGTTTTCA  Raphanus sativus cv GSK3-1
FY441432       --> GGTACTTCATTCACTCTCCAAGTTCAAGACAAGAAGATCGTTGGTTTTCA  Raphanus sativus cv GSK3-1
FY441586       --> GGTACTTCATTCACTCTCCAAGTTCAAGACAAGAAGATCGTTGGTTTTCA  Raphanus sativus cv GSK3-1
FY441597       --> GGTACTTCATTCACTCTCCAAGTTCAAGACAAGAAGATCGTTGGTTTTCA  Raphanus sativus cv GSK3-1
EW724441       --> GGTACTTCATTCACTCTCCAAGTTCAAGACAAGAAGATCGTTGGTTTTCA  Raphanus sativus cv Early Scarlet Globe
EV547636       --> GGTACTTCATTCACTCTCCAAGTTCAAGACAAGAAGATCGTTGGTTTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY921527       --> .........................................gGGTTTTCA  Raphanus raphanistrum subsp. landra
EW732637       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY931057       --> ..................................................  Raphanus sativus var. oleiformis

               451    -    501
UN10403        --> TGGGTTTGCCGGAGACTATGTCCATTCTCTTGGAGCTTACTTTGCTCCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544400       <-- TGGGTTTGCCGGAGACTATGTCCATTCTCTTGGAGCTTACTTTGCTCCGT
EV540738       <-- TGGGTTTGCCGGAGACTATGTCCATTCTCTTGGAGCTTACTTTGCTCCGT
FD976558       <-- TGGGTTTGCCGGAGACTATGTCCATTCTCTTGGAGCTTACTCTGCTCCGT
EX909765       <-- TGGGCTTGCCGGAGACTATGTCCATTCTCTTGGAGCTTACTTTGCTCCGT
EV543472       <-- TGGGTTTGCCGGAGACTATGTCCATTCTCTTGGAGCTTACTTTGCTCCGT
EX769362       <-- TGGGCTTGCCGGAGACTATGTCCATTCTCTTGGAGCTTACTTTGCTCCGT
EW737311       <-- ..................................................
EY917656       <-- ..................................................
EY917777       <-- ..................................................
EV548785       --> TGGGTTTGCCGGAGACTATGTCCATTCTCTTGGAGCTTACTTTGCTCCGT
EX747215       --> TGGGTTTGCCGGAGACTATGTCCATTCTCTTGGAGCTTACTTTGCTCCGT
EV536244       --> TGGGTTTGCCGGAGACTATGTCCATTCTCTTGGAGCTTACTTTGCTCCGT
EV552476       --> TGGGTTTGCCGGAGACTATGTCCATTCTCTTGGAGCTTACTTTGCTCCGT
EW722967       --> TGGGTTTGCCGGAGACTATGTCCATTCTCTTGGAGCTTACTTTGCTCCGT
EW723526       --> TGGGTTTGCCGGAGACTATGTCCATTCTCTTGGAGCTTACTTTGCTCCGT
EW725692       --> TGGGTTTGCCGGAGACTATGTCCATTCTCTTGGAGCTTACTTTGCTCCGT
EX757733       --> TGGGTTTGCCGGAGACTATGTCCATTCTCTTGGAGCTTACTTTGCTCCGT
EX894714       --> TGGGTTTGCCGGAGACTATGTCCATTCTCTTGGAGCTTACTTTGCTCCGT
EY900162       --> TGGGTTTGCCGGAGACTATGTCCATTCTCTTGGAGCTTACTTTGCTCCGT
EY921669       --> TGGGTTTGCCGGAGACTATGTCCATTCTCTTGGAGCTTACTTTGCTCCGT
FD568338       --> TGGGTTTGCCGGAGACTATGTCCATTCTCTTGGAGCTTACTTTGCTCCGT
FD569379       --> TGGGTTTGCCGGAGACTATGTCCATTCTCTTGGAGCTTACTTTGCTCCGT
FD962353       --> TGGGTTTGCCGGAGACTATGTCCATTCTCTTGGAGCTTACTTTGCTCCGT
FD964617       --> TGGGTTTGCCGGAGACTATGTCCATTCTCTTGGAGCTTACTTTGCTCCGT
FY441978       --> TGGGTTTGCCGGAGACTATGTCCATTCTCTTGGAGCTTACTTTGCTCCGT
FY441432       --> TGGGTTTGCCGGAGACTATGTCCATTCTCTTGGAGCTTACTTTGCTCCGT
FY441586       --> TGGGTTTGCCGGAGACTATGTCCATTCTCTTGGAGCTTACTTTGCTCCGT
FY441597       --> TGGGTTTGCCGGAGACTATGTCCATTCTCTTGGAGCTTACTTTGCTCCGT
EW724441       --> TGGGTTTGCCGGAGACTATGTCCATTCTCTTGGAGCTTACTTTGCTCCGT
EV547636       --> TGGGTTTGCCGGAGACTATGTCCATTCTCTTGGAGCTTACTTTGCTCCGT
EY921527       --> TGGGTTTGCCGGAGACTATGTCCATTCTCTTGGAGCTTACTT-GCTCCGT
EW732637       --> ..................................................
EY931057       --> ..................................................

               501    -    551
UN10403        --> TGACTAGTTCCACCTCGTTGACCCCTGCCAAGAAGCTACCGGCACTTGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544400       <-- TGAATAGTTCCACCTCGTTGACCCCTGCCAAGAAGCTACCGGCACTTGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV540738       <-- TGACTAGTTCCACCTCGTTGACCCCTGCCGAGAAGCTACCGACACTTGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976558       <-- TGACTAGTTCCACCTCGTTGACCCCTGCCAAGAAGCTACCGGCACTTGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX909765       <-- TGACTAGTTCCACCTCGTTGACCCCTGCCAAGAAGCTACCGGCACTTGGT  Raphanus sativus cv Rat-Tail Radish #3870
EV543472       <-- TGAATAGTTCCACCTCGTTGACCCCTGCCAAGAAGCTACCGGCACTTGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX769362       <-- TGACTAGTTCCACCTCGTTGACCCCTGCCAAGAAGCTACCGGCACTTGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW737311       <-- ..gCTAGTTCCACCTCGTTGACCCCTGCCAAGAAGCTACCGGCACTTGGT  Raphanus sativus cv Rat-Tail Radish #3870
EY917656       <-- ............................CAAGAAGCTACCGGCACTTGGT  Raphanus raphanistrum subsp. landra
EY917777       <-- ............................CAAGAAGCTACCGGCACTTGGT  Raphanus raphanistrum subsp. landra
EV548785       --> TGAATAGTTCCACCTCGTTGACCCCTGCCAAGAAGCTACCGGCACTTGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX747215       --> TGACTAGTTCCACCTCGTTGACCCCTGCCAAGAAGCTGCCGGCACTTGGT  Raphanus raphanistrum subsp. maritimus
EV536244       --> TGACTAGTTCCACCTCGTTGACCCCTGCCGAGAAGCTACCGACACTTGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV552476       --> TGACTAGTTCCACCTCGTTGACCCCTGCCAAGAAGCTACCGGCACTTGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW722967       --> TGACTAGTTCCACCTCGTTGACCCCTGCCAAGAAGCTACCGGCACTTGGT  Raphanus sativus cv Early Scarlet Globe
EW723526       --> TGACTAGTTCCACCTCGTTGACCCCTGCCAAGAAGCTACCGGCACTTGGT  Raphanus sativus cv Early Scarlet Globe
EW725692       --> TGACTAGTTCCACCTCGTTGACCCCTGCCAAGAAGCTGCCGGCACTTGGT  Raphanus sativus cv Early Scarlet Globe
EX757733       --> TGACTAGTTCCACCTCGTTGACCCCTGCCAAGAAGCTACCGGCACTTGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX894714       --> TGACTAGTTCCACCTCGTTGACCCCTGCCAAGAAGCTGCCGGCACTTGGT  Raphanus sativus cv Early Scarlet Globe
EY900162       --> TGACTAGTTCCACCTCGTTGACCCCTGCCAAGAAGCTGCCGGCACTTGGT  Raphanus raphanistrum subsp. maritimus
EY921669       --> TGACTAGTTCCACCTCGTTGACCCCTGCCAAGAAGCTACCGGCACTTGGT  Raphanus raphanistrum subsp. landra
FD568338       --> TGACTAGTTCCACCTCGTTGACCCCTGCCAAGAAGCTACTGGCACTTGGT  Raphanus sativus cv Early Scarlet Globe
FD569379       --> TGACTAGTTCCACCTCGTTGACCCCTGCCAAGAAGCTGCCGTCACTTGGT  Raphanus sativus cv Early Scarlet Globe
FD962353       --> TGACTAGTTCCACCTCGTTGACCCCTGCCAAGAAGCTGCCGGCACTTGGT  Raphanus raphanistrum subsp. maritimus
FD964617       --> TGACTAGTTCCACCTCGTTGACCCCTGCCAAGAAGCTGCCGGCACTTGGT  Raphanus raphanistrum subsp. maritimus
FY441978       --> TGACTAGTTCCACCTCGTTGACCCCTGCCAAGAAGCTACCGGCACTTGGT  Raphanus sativus cv GSK3-1
FY441432       --> TGACTAGTTCCACCTCGTTGACCCCTGCCAAGAAGCTACCGGCACTTGGT  Raphanus sativus cv GSK3-1
FY441586       --> TGACTAGTTCCACCTCGTTGACCCCTGCCAAGAAGCTACCGGCACTTGGT  Raphanus sativus cv GSK3-1
FY441597       --> TGACTAGTTCCACCTCGTTGACCCCTGCCAAGAAGCTACCGGCACTTGGT  Raphanus sativus cv GSK3-1
EW724441       --> TGACTAGTTCCACCTCGTTGACCCCTGCCAAGAAGCTACCGGCACTTGGT  Raphanus sativus cv Early Scarlet Globe
EV547636       --> TGAATAGTTCCACCTCGTTGACCCCTGCCAAGAAGCTACCGGCACTTGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY921527       --> TGACTAGTTCCACCTCGTTGACCCCTGCCAAGAAGCTACCGGCACTTGGT  Raphanus raphanistrum subsp. landra
EW732637       --> .............................AAGAAGCTACCGGCACTTGGT  Raphanus sativus cv Rat-Tail Radish #3870
EY931057       --> ..................................................  Raphanus sativus var. oleiformis

               551    -    601
UN10403        --> AGTGATGAA-GGGACTGCATGGGACGATGGTGCTCACCATGGTGTTAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544400       <-- AGTGATGAA-GGGACTGCATGGGACGATGGTGCTCACCATGGTGTTAAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV540738       <-- AGTGATGAA-GGGACTGCATGGGACGATGGTGCTCACCATGGTGTTAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976558       <-- AGTGATGAA-GGGACTGCATGGGACGATGGTGCTCACCATGGTGTTAAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX909765       <-- AGTGATGAA-GGGACTGCATGGGACGATGGTGCTCACCATGGTGTTAAAA  Raphanus sativus cv Rat-Tail Radish #3870
EV543472       <-- AGTGATGAA-GGGACTGCATGGGACGATGGTGCTCACCATGGTGTTAAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX769362       <-- AGTGATGAA-GGGACTGCATGGGACGATGGTGCTCACCATGGTGTTAAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW737311       <-- AGTGATGAA-GGGACTGCATGGGACGATGGTGCTCACCATGGTGTTAAAA  Raphanus sativus cv Rat-Tail Radish #3870
EY917656       <-- AGTGATGAA-GGGACTGCATGGGACGATGGTGCTCACCATGGTGTTAAAA  Raphanus raphanistrum subsp. landra
EY917777       <-- AGTGATGAA-GGGACTGCATGGGACGATGGTGCTCACCATGGTGTTAAAA  Raphanus raphanistrum subsp. landra
EV548785       --> AGTGATGAA-GGGACTGCATGGGACGATGGTGCTCACCATGGTGTTAAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX747215       --> AGTGATGAA-GGGACTGCATGGGACGATGGTTCTCACCATGGTGTTAAAA  Raphanus raphanistrum subsp. maritimus
EV536244       --> AGTGATGAA-GGGACTGCATGGGACGATGG....................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV552476       --> AGTGATGAA-GGGACTGCATGGGACGATGGTGCTCACCATGGTGTTAAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW722967       --> AGTGATGAA-GGGACTGCATGGGACGATGGTGCTCACCATGGTGTTAAAA  Raphanus sativus cv Early Scarlet Globe
EW723526       --> AGTGATGAA-GGGACTGCATGGGACGATGG....................  Raphanus sativus cv Early Scarlet Globe
EW725692       --> AGTGATGAA-GGGACTGCATGGGACGATGGTTCTCACCATGGTGTTAAAA  Raphanus sativus cv Early Scarlet Globe
EX757733       --> AGTGATGAA-GGGACTGCATGGGACGATGGTGCTCACCATGGTGTTAAAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX894714       --> AGTGATGAA-GGGACTGCATGGGACGATGGTTCTCACCATGGTGTTAAAA  Raphanus sativus cv Early Scarlet Globe
EY900162       --> AGTGATGAA-GGGACTGCATGGGACGATGGTTCTCACCATGGTGTTAAAA  Raphanus raphanistrum subsp. maritimus
EY921669       --> AGTGATGAA-GGGACTGCATGGGACGATGGTGCTCACCATGGTGTTAAAA  Raphanus raphanistrum subsp. landra
FD568338       --> AGTGATGAAAGGGACTGCATGGGACGATGGTGCTCACCATGGTGTTAAAA  Raphanus sativus cv Early Scarlet Globe
FD569379       --> AGTGATGAA-GGGACTGCATGGGACGATGGTTCTCACCATGGTGTTAAAA  Raphanus sativus cv Early Scarlet Globe
FD962353       --> AGTGATGAA-GGGACTGCATGGGACGATGGTTCTCACCATGGTGTTAAAA  Raphanus raphanistrum subsp. maritimus
FD964617       --> AGTGATGAAAGGGACTGCATGGGACGATGGTTCTCACCATGGTGTTAAAA  Raphanus raphanistrum subsp. maritimus
FY441978       --> AGTGATGAA-GGGACTGCATGGGACGATGGTGCTCACCATGGTGTTAAAA  Raphanus sativus cv GSK3-1
FY441432       --> AGTGATGAA-GGGACTGCATGGGACGATGGTGCTCACCATGGTGTTAAAA  Raphanus sativus cv GSK3-1
FY441586       --> AGTGATGAA-GGGACTGCATGGGACGATGGTGCTCACCATGGTGTTAAAA  Raphanus sativus cv GSK3-1
FY441597       --> AGTGATGAA-GGGACTGCATGGGACGATGGTGCTCACCATGGTGTTAAAA  Raphanus sativus cv GSK3-1
EW724441       --> AGTGATGAA-GGGACTGCATGGGACGATGGTGCTCACCATGGTGTTAAAA  Raphanus sativus cv Early Scarlet Globe
EV547636       --> AGTGATGAA-GGGACTGCATGGGACGATGGTGCTCACCATGGTGTTAAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY921527       --> AGTGATGAA-GGGACTGCATGGGACGATGGTGCTCACCATGGTGTTAAAA  Raphanus raphanistrum subsp. landra
EW732637       --> AGTGATGAA-GGGACTGCATGGGACGATGGTGCTCACCATGGTGTTAAAA  Raphanus sativus cv Rat-Tail Radish #3870
EY931057       --> ..................................................  Raphanus sativus var. oleiformis

               601    -    651
UN10403        --> A-GGTGTATGTAGGTCAAGGCCATGATGGTGTATCAGCGGTTAAGTTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544400       <-- A-GGTGTATGTAGGTCAAGGCCATGATGGTGTATCAGCGGTTAAGTTTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV540738       <-- A-GGTGTATGTAGGTCAAGGCCATGATGGTGTATCAGCGGTTAAGTTTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976558       <-- A-GGTGTATGTAGGTCAAGGCCATGATGGTGTATCAGCGGTTAAGTTTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX909765       <-- A-GGTGTATGTAGGTCAAGGCCATGATGGTGTATCAGCGGTTAAGTTTGA  Raphanus sativus cv Rat-Tail Radish #3870
EV543472       <-- A-GGTGTATGTAGGTCAAGGCCATGATGGTGTATCAGCGGTTAAGTTTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX769362       <-- A-GGTGTATGTAGGTCAAGGCCATGATGGTGTATCAGCGGTTAAGTTTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW737311       <-- A-GGTGTATGTAGGTCAAGGCCATGATGGTGTATCAGCGGTTAAGTTTGA  Raphanus sativus cv Rat-Tail Radish #3870
EY917656       <-- A-GGTGTATGTAGGTCAAGGCCATGATGGTGTATCAGCGGTTAAGTTTGA  Raphanus raphanistrum subsp. landra
EY917777       <-- A-GGTGTATGTAGGTCAAGGCCATGATGGTGTATCAGCGGTTAAGTTTGA  Raphanus raphanistrum subsp. landra
EV548785       --> A-GGTGTATGTAGGTCAAGGCCATGATGGTGTATCAGCGGTTAAGTTTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX747215       --> AAGGTATATGTAGGTCAAGGCCATGATGGTGTATCAGCGGTTAAGTTTGA  Raphanus raphanistrum subsp. maritimus
EV536244       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV552476       --> A-GGTGTATGTAGGTCAAGGCCATGATGGTGTATCAGCGGTTAAGTTTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW722967       --> A-GGTGTATGTAGGTCAAGGCCATGATGGTGTATCAGCGGTTAAGTTTGA  Raphanus sativus cv Early Scarlet Globe
EW723526       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW725692       --> A-GGTATATGTAGGTCAAGGCCATGATGGTGTATCAGCGGTTAAGTTTGA  Raphanus sativus cv Early Scarlet Globe
EX757733       --> A-GGTGTGTGTAG-TCAAGGCCATGATGGTGTATCAGCGGTTAAGTTTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX894714       --> A-GGTATATGTAGGTCAAGGCCATGATGGTGTATCAGCGGTTAAGTTTGA  Raphanus sativus cv Early Scarlet Globe
EY900162       --> A-GGTATATGTAGGTCAAGGCCATGATGGTGTATCAGCGGTTAAGTTTGA  Raphanus raphanistrum subsp. maritimus
EY921669       --> A-GGTGTATGTAGGTCAAGGCCATGATGGTGTATCAGCGGTTAAGTTTGA  Raphanus raphanistrum subsp. landra
FD568338       --> A.................................................  Raphanus sativus cv Early Scarlet Globe
FD569379       --> A-GGTATATGTAGGTCAAGGCCATGATGGTGTATCAGCGGTCAAGTTTGA  Raphanus sativus cv Early Scarlet Globe
FD962353       --> A-GGTATATGTAGGTCAAGGCCATGATGGTGTATCAGCGGTTAAGTTTGA  Raphanus raphanistrum subsp. maritimus
FD964617       --> A.................................................  Raphanus raphanistrum subsp. maritimus
FY441978       --> A-GGTGTATGTAGGTCAAGGCCATGATGGTGTATCAGCGGTTAAGTTTGA  Raphanus sativus cv GSK3-1
FY441432       --> A-GGTGTATGTAGGTCAAGGCCATGATGGTGTATC...............  Raphanus sativus cv GSK3-1
FY441586       --> A-GGTGTATGTAGGTCAAGGCCATGATGGTGTATCAGCGGTTAAGTTTGA  Raphanus sativus cv GSK3-1
FY441597       --> A-GGTGTATGTAGGTCAAGGCCATGATGGTGTATCAGCGGTTAAGTTTGA  Raphanus sativus cv GSK3-1
EW724441       --> A-GGTGTATGTAGGTCAAGGCCATGATGGTGTATCAGCGGTTAAGTTTGA  Raphanus sativus cv Early Scarlet Globe
EV547636       --> A-GGTGTATGTAGGTCAAGGCCATGATGGTGTATCAGCGGTTAAGTTTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY921527       --> A-GGTGTATGTAGGTCAAGGCCATGATGGTGTATCAGCGGTTAAGTTTGA  Raphanus raphanistrum subsp. landra
EW732637       --> A-GGTGTATGTAGGTCAAGGCCATGATGGTGTATCAGCGGTTAAGTTTGA  Raphanus sativus cv Rat-Tail Radish #3870
EY931057       --> ..................................................  Raphanus sativus var. oleiformis

               651    -    701
UN10403        --> -TATGTCAATGGTTCTGAAGTGGTTGTTGGAGATGAACGTGGAAAGCCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544400       <-- ATATGTCAATGGTTCTGAAGTGGTTGTTGGAGATGAACGTGGAAAGCCTA
EV540738       <-- ATATGTCAATGGTTCTGAAGTGGTTGTTGGAGATGAACGTGGAAAGCCTA
FD976558       <-- ATATGTCAATGGTTCTGAAGTGGTTGTTGGAGATGAACGTGGAAAGCCTA
EX909765       <-- ATATGTCAATGGTTCTGAAGTGGTTGTTGGAGATGAACGTGGAAAGCCTA
EV543472       <-- ATATGTCAATGGTTTTGAAGTGGTTGTTGGAGATGAACGTGGAAAGCCTA
EX769362       <-- ATATGTCAATGGTTCTGAAGTGGTTGTTGGAGATGAACGTGGAAAGCCTA
EW737311       <-- ATATGTCAATGGTTCTGAAGTGGTTGTTGGAGATGAACGTGGAAAGCCTA
EY917656       <-- ATATGTCAATGGTTCTGAAGTGGTTGTTGGAGATGAACGTGGAAAGCCTA
EY917777       <-- -TATGTCAATGGTTCTGAAGTGGTTGTTGGAGATGAACGTGGAAAGCCTA
EV548785       --> ATATGTCAATG.......................................
EX747215       --> ATATGTCAATGGTTCTGAAGTGGTTGTTGGAGATGAACGTGGAAAGCCTA
EV536244       --> ..................................................
EV552476       --> ATATGTCAATGGTTCTGAAGTGGTTGTTGGAGATGAACGTGGAAAGCCTA
EW722967       --> ATATGTCAATGGTTCTGAAGTGGTTGTTGGAGATGAACGCGAAAAGCCTA
EW723526       --> ..................................................
EW725692       --> -TATGTCAATGGTTCTGAAGTGGTTGTTGGAGATGAACGTGGAAAGCCTA
EX757733       --> -TATGTCAATGGTTCTGAAGTGGTTGTTGGAGATGAACGTGGAAAGC-TA
EX894714       --> ATATGTCAATGGTTCTGAAGTGGTTGTTGGAGATGAACGTGGAAAGCCTA
EY900162       --> ATATGTCAATGGTTCTGAAGTGGTTGTTGGAGATGAACGTGGAAATCCTA
EY921669       --> -TATGTCAATGGTTCTGAAGTGGTTGTTGGAGATGAACGTGGAAAGCCTA
FD568338       --> ..................................................
FD569379       --> ATATGTCAATGGTTCTGAAGTGGTTGTTGGAGATGAACGTGGAAAGCCTA
FD962353       --> -TATGTCA-TGGTTCTGAAGTGGTTGTTGGAGATGAACGTGGAAAGCCTA
FD964617       --> ..................................................
FY441978       --> ATATGTCAATGGTTCTGAAGTGGTTGTTGGAGATGAACGTGGAAAGCCTA
FY441432       --> ..................................................
FY441586       --> ATATGTCAATGGTTCTGAAGTGGTTGTTGGAGATGAACGTGGAAAGCCTA
FY441597       --> ATATGTCAATGGTTCTGAAGTGGTTGTTGGAGATGAACGTGGAAAGCCTA
EW724441       --> ATATGTCAATGGTTCTGAAGTGGTTGTTGGAGATGAACGTGGAAAGCCTA
EV547636       --> ATATGTCAATGGTTCTGAAGTGGTTGTTGGAGATGAACGTGGAAAGCCTA
EY921527       --> ATATGTCAATGGTTCTGAAGTGGTTGTTGGAGATGAACGTGGAAAGCCTA
EW732637       --> ATATGTCAATGGTTCTGAAGTGGTTGTTGGAGATGAACGTGGAAAGCCTA
EY931057       --> ..................................................

               701    -    751
UN10403        --> CTCTGCTCGGATTCGAAGAGTTCGAACTTGACTATCCAAATGAATACATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544400       <-- CTCTGCTCGGATTCGAAGAGTTCGAACTTGACTATCCAAATGAATACATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV540738       <-- CTCTGCTCGGATTCGAAGAGTTCGAACTTGACTATCCAAATGAATACATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD976558       <-- CTCTGCTCGGATTCGAAGAGTTCGAACTTGACTATCCAAATGAATACATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX909765       <-- CTCTGCTCGGATTCGAAGAGTTCGAACTTGACTATCCAAATGAATACATC  Raphanus sativus cv Rat-Tail Radish #3870
EV543472       <-- CTTTGCTCGGATTCGAAGAGTTCGAACTTGACTATCCAAATGAATACATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX769362       <-- CTCTGCTCGGATTCGAAGAGTTCGAACTTGACTATCCAAATGAATACATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW737311       <-- CTCTGCTCGGATTCGAAGAGTTCGAACTTGACTATCCAAATGAATACATC  Raphanus sativus cv Rat-Tail Radish #3870
EY917656       <-- CTCTGCTCGGATTCGAAGAGTTCGAACTTGACTATCCAAATGAATACATC  Raphanus raphanistrum subsp. landra
EY917777       <-- CTCTGCTCGGATTCGAAGAGTTCGAACTTGACTATCCAAATGAATACATC  Raphanus raphanistrum subsp. landra
EV548785       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX747215       --> CTCTACTAGGATTC....................................  Raphanus raphanistrum subsp. maritimus
EV536244       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV552476       --> CTCTGCTCGGATTCGAAGAGTTCGAACTTGACTATCCAAATGAATACATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW722967       --> CTCTGCTCGGATTCGAAGAGTTCGAACTTGACTATCCAAATGAATACATC  Raphanus sativus cv Early Scarlet Globe
EW723526       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW725692       --> CTCTACT-AGATTCGAAGAGT-CGAACTTGACTATCCAAATGA-TACATC  Raphanus sativus cv Early Scarlet Globe
EX757733       --> CTCTGCTCGGATTCGA-GAG-TCGAACTTGACTATCCAA-TG-ATACATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX894714       --> CTCTACT-AGATTCGAAGAGTTCGAACTTGACTATCCAAATGAATACATC  Raphanus sativus cv Early Scarlet Globe
EY900162       --> CTCTACT-AGATTCGAAGAGTTCGAACTTGACTATCCAAATGA-TACATC  Raphanus raphanistrum subsp. maritimus
EY921669       --> CTCTGCTCGGATTCGAAGAGT-CGAACTTGACTATC-AAATGA-TACATC  Raphanus raphanistrum subsp. landra
FD568338       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD569379       --> CTCTACT-AGATTCGAAGAGT-CGAACTTGACTATCCAA-TG-ATACATC  Raphanus sativus cv Early Scarlet Globe
FD962353       --> CTCTa.............................................  Raphanus raphanistrum subsp. maritimus
FD964617       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FY441978       --> CTCTGCTCGGATTCGAAGAGTTCGAACTTGACTATCCAAATGAATACATC  Raphanus sativus cv GSK3-1
FY441432       --> ..................................................  Raphanus sativus cv GSK3-1
FY441586       --> CTCTGCTCGGATTCGAAGAGTTCGAACTTGACTATCCAAATGAATACATC  Raphanus sativus cv GSK3-1
FY441597       --> CTCTGCTCGGATTCGAAGAGTTCGAACTTGACTATCCAAATGAATACATC  Raphanus sativus cv GSK3-1
EW724441       --> CTCTGCTCGGATTCGAAGAGTTCGAACTTGACTAT...............  Raphanus sativus cv Early Scarlet Globe
EV547636       --> CTCTGCTCGGATTCGAAGAGTTCGAACTTGACTATCCAAATGAATACATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY921527       --> CTCTGCTCGGATTCGAAGAGTTCGAACTTGACTATCCAAATGAATACATC  Raphanus raphanistrum subsp. landra
EW732637       --> CTCTGCTCGGATTCGAAGAGTTCGAACTTGACTATCCAAATGAATACATC  Raphanus sativus cv Rat-Tail Radish #3870
EY931057       --> .............gGAAGAGTTCGAACTTGACTATCCAAATGAATACATC  Raphanus sativus var. oleiformis

               751    -    801
UN10403        --> ACGGTTGTTCATGGCACAGTCGATAAAATCTTTGGGAGTGACTCTGCCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544400       <-- ACGGTTGTTCATGGCACAGTCGATAAAATCTTTGGGAGTGACTCTGCCGT
EV540738       <-- ACGGTTGTTCATGGCACAGTCGATAAAATCTTTGGGAGTGACTCTGCCGT
FD976558       <-- ACGGTTGTTCATGGCACAGTCGATAAAATCTTTGGGAGTGACTCTGCCGT
EX909765       <-- ACGGTTGTTCATGGCACAGTCGATAAAATCTTTGGGAGTGACTCTGCCGT
EV543472       <-- ACGGTTGTTCATGGCACAGTCGATAAAATCTTTGGGAGTGACTTTGCCGT
EX769362       <-- ACGGTTGTTCATGGCACAGTCGATAAAATCTTTGGGAGTGACTCTGCCGT
EW737311       <-- ACGGTTGTTCATGGCACAGTCGATAAAATCTTTGGGAGTGACTCTGCCGT
EY917656       <-- ACGGTTGTTCATGGCACAGTCGATAAAATCTTTGGGAGTGGCTCTGCCGT
EY917777       <-- ACGGTTGTTCATGGCACAGTCGATAAAATCTTTGGGAGTGACTCTGCCGT
EV548785       --> ..................................................
EX747215       --> ..................................................
EV536244       --> ..................................................
EV552476       --> ACGGTTGTTCATGGCACAGTCGATAAAATCT...................
EW722967       --> ACGGTTGTTCATGGCACAGTCGATAAAAT.....................
EW723526       --> ..................................................
EW725692       --> ACGGT-G-TCATGGCACAGTCGATAAA-TCTTTGG-AGTGAGTCTGC-GT
EX757733       --> ACGGT-G-TCATGGCACAGTCGATAAA-TCTTTGG-AGTGACTCTGC-GT
EX894714       --> ACGGTTGTTCATGGCACAGTCGATAAAATCTTTGGAAGTGAGTCTGCCGT
EY900162       --> ACGGTTGTTCATGGCACAGTCGATAAAATCTTT.................
EY921669       --> ACGGTTGTTCATGGCACAGTCGATAAA-TCTTTGGGAGTGACTCTGCCGT
FD568338       --> ..................................................
FD569379       --> ACGGTTGTTCATGGCACAGTCGATAAA-TCTTTGG-AGTGAGTCTGCCGT
FD962353       --> ..................................................
FD964617       --> ..................................................
FY441978       --> ACGGTTGTTCATGGCACAGTCGATAAAATCTTTGGGAGTGACTCTGCCGT
FY441432       --> ..................................................
FY441586       --> ACGGTTGTTCATGGCACAGTCGATAAAATCTTTGGGAGTGACTCTGCCGT
FY441597       --> ACGGTTGTTCATGGCACAGTCGATAAAATCTTTGGGAGTGACTCTGCCGT
EW724441       --> ..................................................
EV547636       --> ACGGTTGTTCATGGCACAGTCGATAAA-TCTTTGGGAGTGACTCTGCCGT
EY921527       --> ACGGTTGTTCATGGCACAGTCGATAAAATCTTTGGGAGTGGCTCTGCCGT
EW732637       --> ACGGTTGTTCATGGCACAGTCGATAAAATCTTTGGGAGTGACTCTGCCGT
EY931057       --> ACGGTTGTTCATGGCACAGTCGATAAAATCTTTGGGAGTGACTCTGCCGT

               801    -    851
UN10403        --> CATCACCATGCTAAAGTTCGAGACTAATAAA-CGAACATCCAATCCCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544400       <-- CATCACCATGCTAAAGTTCGAGACTAATAAA-CGAACATCCAATCCCTTT
EV540738       <-- CATCACCATGCTAAAGTTCGAGACTAATAAA-CGAACATCCAATCCCTTT
FD976558       <-- CATCACCATGCTAAAGTTCGAGACTAATAAA-CGAACATCCAATCCCTTT
EX909765       <-- CATCACCATGCTAAAGTTCGAGACTAATAAA-CGAACATCCAATCCCTTT
EV543472       <-- CATCACCATGGTAAAGTTCGAGACTAATAAA-CGAACATCCAATCCCTTT
EX769362       <-- CATCACCATGCTAAAGTTCGAGACTAATAAA-CGAACATCCAATCCCTTT
EW737311       <-- CATCGCCATGCTAAAGTTCGAGACTAATAAA-CGAACATCCAATCCCTTT
EY917656       <-- CATCACCATGCTAAAGTTCGAGACTAATAAA-CGAACATCCAATCCCTTT
EY917777       <-- CATCACCATGCTAAAGTTCGAGACTAATAAA-CGAACATCCAATCCCTTT
EV548785       --> ..................................................
EX747215       --> ..................................................
EV536244       --> ..................................................
EV552476       --> ..................................................
EW722967       --> ..................................................
EW723526       --> ..................................................
EW725692       --> CAT...............................................
EX757733       --> CATCAC-ATGCTAA-G-TCGAGACTAtacgacatcatccttgtc......
EX894714       --> CATCAC............................................
EY900162       --> ..................................................
EY921669       --> CATCACCATGCTAAAGT-CGAGACTAtaacg...................
FD568338       --> ..................................................
FD569379       --> CATCACCATGCTCAAGT-CGAGACT.........................
FD962353       --> ..................................................
FD964617       --> ..................................................
FY441978       --> CATCACCATGCTAAAGTTCGAGACTAATAAA-CGAACATCCAATCCCTTT
FY441432       --> ..................................................
FY441586       --> CATCACCATGCTAAAGTTCGAGACTAATAAA-CGAACATCCAATCCCTTT
FY441597       --> CATCACCATGCTAAAGTTCGAGACTAATAAAACGAACATCCAATCCCTTT
EW724441       --> ..................................................
EV547636       --> CATCACCATGCTAAAGTTCGAGACTA-TAAA-CGA-CATCCAATCCCTTT
EY921527       --> CATCACCATGCTAAAGTTCGAGACTAATAAA-CGAACATCCAATCCCTTT
EW732637       --> CATCGCCATGCTAAAGTTCGAGACTAATAAA-CGAACATCCAATCCCTTT
EY931057       --> CATCACCATGCTAAAGTTCGAGACTAATAAA-CGAACATCCAATCCCTTT

               851    -    901
UN10403        --> GGTCTTGAAGCTGGCGAACCTTTCAAAGTCAAAGAGGAAGGCCACAAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544400       <-- GGTCTTGAAGCTGGCGAACCTTTCAAAGTCAAAGAGGAAGGCCACAAGAT
EV540738       <-- GGTCTTGAAGCTGGCGAACCTTTCAAAGTCAAAGAGGAAGGCCACAAGAT
FD976558       <-- GGTCTTGAAGCTGGCGAACCTTTCAAAGTCAAAGAGGAAGGCCACAAGAT
EX909765       <-- GGTCTTGAAGCTGGCGAACCTTTCAAAGTCAAAGAGGAAGGCCACAAGAT
EV543472       <-- GGTTTTGAAGCTGGCGAACCTTTCAAAGTCAAAGAGGAAGGCCACAAGAT
EX769362       <-- GGTCTTGAAGCTGGCGAACCTTTCAAAGTCAAAGAGGAAGGCCACAAGAT
EW737311       <-- GGTCTTGAAGCTGGCGAACCTTTCAAAGTCAAAGAGGAAGGCCACAAGAT
EY917656       <-- GGTCTTGAAGCTGGCGAACCTTTCAAAGTCAACGAGGAAGGCCGCAAGAT
EY917777       <-- GGTCTTGAAGCTGGCGAACCTTTCAAAGTCAAAGAGGAAGGCC--AAGAT
EV548785       --> ..................................................
EX747215       --> ..................................................
EV536244       --> ..................................................
EV552476       --> ..................................................
EW722967       --> ..................................................
EW723526       --> ..................................................
EW725692       --> ..................................................
EX757733       --> ..................................................
EX894714       --> ..................................................
EY900162       --> ..................................................
EY921669       --> ..................................................
FD568338       --> ..................................................
FD569379       --> ..................................................
FD962353       --> ..................................................
FD964617       --> ..................................................
FY441978       --> GGTCTTGAAGCTGGCGAACCTTTCAAAGTC....................
FY441432       --> ..................................................
FY441586       --> GGTCTTGAAGCTGGCGAACCTTTCAAAGTCAAAGAGGAAGGCCACAAGAT
FY441597       --> GGTCTTGAAGCTGGCGAACCTTTCAAAGTCAAAGAG..............
EW724441       --> ..................................................
EV547636       --> GGTCTgagc.........................................
EY921527       --> GGTCTTGAAGCTGGCGAACCTTTCAAAGTCAACGAGGAAGGCCGCAAGAT
EW732637       --> GGTCTTGAAGCTGGCGAACCTTTCAAAGTCAAAGAGGAAGGCCACAAGAT
EY931057       --> GGTCTTGAAGCTGGCGAACCTTTCAAAGTCAAAGAGGAAGGCCACAAGAT

               901    -    951
UN10403        --> CGTTGGGTTTCATGGAAAAGCCAATGAGCTGCTTCATCAAATTGGAGTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544400       <-- CGTTGGGTTTCATGGAAAAGCCAATGAGCTGCTTCATCAAATTGGAGTCC
EV540738       <-- CGTTGGGTTTCATGGAAAAGCCAATGAGCTACTTCATCAAATTGGAGTCC
FD976558       <-- CGTTGGGTTTCATGGAAAAGCCAATGAGCTACTTCATCAAATTGGAGTCC
EX909765       <-- CGTTGGGTTTCATGGAAAAGCCAATGAGCTGCTTCATCAAATTGGAGTCC
EV543472       <-- CGTTGGGTTTCATGGAAAAGCCAATGAGCTGCTTCATCAAATTGGAGTCC
EX769362       <-- CGTTGGGTTTCATGGAAAAGCCAATGAGCTGCTTCATCAAATTGGAGTCC
EW737311       <-- CGTTGGGTTTCATGGAAAAGCCAATGAGCTGCTTCATCAAATTGGAGTCC
EY917656       <-- CGTTGGGTTTCATGGAAAAGCCAATGAGCTGCTTCATCAAATTGGAGTCC
EY917777       <-- CGTTGGGTTTCATGGAAAAGCCAATGAGCTGCTTCATCAAATTGGAGTCC
EV548785       --> ..................................................
EX747215       --> ..................................................
EV536244       --> ..................................................
EV552476       --> ..................................................
EW722967       --> ..................................................
EW723526       --> ..................................................
EW725692       --> ..................................................
EX757733       --> ..................................................
EX894714       --> ..................................................
EY900162       --> ..................................................
EY921669       --> ..................................................
FD568338       --> ..................................................
FD569379       --> ..................................................
FD962353       --> ..................................................
FD964617       --> ..................................................
FY441978       --> ..................................................
FY441432       --> ..................................................
FY441586       --> CGTTGGGTTTCATGGAAAAGCCAATGAGCTGCTTCAT.............
FY441597       --> ..................................................
EW724441       --> ..................................................
EV547636       --> ..................................................
EY921527       --> CGTTGGGTTTCATGGAAAAGCCAATGAGCTGCTTCATCAAATTGGAGTCC
EW732637       --> CGTTGGGTTTCATGGAAAAGCCAATGAGCTGCTTCATCAAATTGGAGTCC
EY931057       --> CGTTGGGTTTCATGGAAAAGCCAATGAGCTGCTTCATCAAATTGGAGTCC

               951    -   1001
UN10403        --> ATGTCCTCCCAATCGCCATCCCAGTCGCCAACTGATGATCATATGACATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544400       <-- ATGTCCTCCCAATCGCCATCCCAGTCGCCAACTGATGATCATATGACATC
EV540738       <-- ATGTCCTCCCAATCTTCATCCCAATCGCCAACTGATGATCATATGACATC
FD976558       <-- ATGTCCTCCCAATCTTCATCCCAGTCGCCAACTGATGATCATATGACATC
EX909765       <-- ATGTCCTCCCAATCGCCATCCCAGTCGCCAACTGATGATCATATGACATC
EV543472       <-- ATGTCCTCCCAATCGCCATCCCAGTCGCCAACTGATGATCATATGACATC
EX769362       <-- ATGTCCTCCCAATCGCCATCCCAGTCGCCAACTGATGATCATATGACATC
EW737311       <-- ATGTCCTCCCAATCGCCATCCCAGTCGCCAACTGATGATCATATGACATC
EY917656       <-- ATGTCCTCCCAATCGCCATCCCAGTCGCCAACTGATGGTCATATGACATC
EY917777       <-- ATGTCCTCCCAATCGCCATCCCAGTCGCCAACTGATGATCATATGACATC
EV548785       --> ..................................................
EX747215       --> ..................................................
EV536244       --> ..................................................
EV552476       --> ..................................................
EW722967       --> ..................................................
EW723526       --> ..................................................
EW725692       --> ..................................................
EX757733       --> ..................................................
EX894714       --> ..................................................
EY900162       --> ..................................................
EY921669       --> ..................................................
FD568338       --> ..................................................
FD569379       --> ..................................................
FD962353       --> ..................................................
FD964617       --> ..................................................
FY441978       --> ..................................................
FY441432       --> ..................................................
FY441586       --> ..................................................
FY441597       --> ..................................................
EW724441       --> ..................................................
EV547636       --> ..................................................
EY921527       --> ATGTCCTCCCAATCGCCATCCCAGTCGCCAACTGATGGTCATATGACATC
EW732637       --> ATGTCCTCCCAATCGCCATCCCAGTCGCCAACTGATGATCATATGACATC
EY931057       --> ATGTCCTCCCAATCTTCATCCCAGTCGCCAACTGATGATCATATGACATC

               1001   -   1051
UN10403        --> TTTCTCTTTGATTCAATCTAATAAGTTATCATATCTGTCTTTTTATGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544400       <-- TTTCTCTTTGATTCAATCTAATAAGTTATCATATCTGTCTTTTTATGTTC
EV540738       <-- TTTCTCTTTGATTCAATCTAATAAGTTATCATATCTGTCTTTTTATGTTC
FD976558       <-- TTTCTCTTTGATTCAATCTAATAAGTTATCATATCTGTCTTTTTATGTTC
EX909765       <-- TTTCTCTTTGATTCAATCTAATAAGTTATCATATCTGTCTTTTTATGTTC
EV543472       <-- TTTCTCTTTGATTCAATTTAATAAGTTATCATATCTGTCTTTTTATGTTT
EX769362       <-- TTTCTCTTTGATTCAATCTAATAAGTTATCATATCTGTCTTTTTATGTTC
EW737311       <-- TTTCTCTTTGATTCAATCTAATAAGTTATCATATCTGTCTTTTTATGTTC
EY917656       <-- TTTCTCTTTGATTCAATCTAATAAGTTATCATATCTGTCTTTTTATGTTC
EY917777       <-- TTTCTCTTTGATTCAATCTAATAAGTTATCATATCTGTCTTTTTATGTTC
EV548785       --> ..................................................
EX747215       --> ..................................................
EV536244       --> ..................................................
EV552476       --> ..................................................
EW722967       --> ..................................................
EW723526       --> ..................................................
EW725692       --> ..................................................
EX757733       --> ..................................................
EX894714       --> ..................................................
EY900162       --> ..................................................
EY921669       --> ..................................................
FD568338       --> ..................................................
FD569379       --> ..................................................
FD962353       --> ..................................................
FD964617       --> ..................................................
FY441978       --> ..................................................
FY441432       --> ..................................................
FY441586       --> ..................................................
FY441597       --> ..................................................
EW724441       --> ..................................................
EV547636       --> ..................................................
EY921527       --> TTTCTCTTTGATTCAATCTAATAAGTTATCATATCTGTCTTTTTATGTTC
EW732637       --> TTTCTCTTTGATTCAATCTAATAAGTTATCATATCTGTCTTTTTATGTTC
EY931057       --> TTTCTCCTTGATTCAATCTAATAAGTTATCATATCTGTCTTTTTATGTTC

               1051   -   1101
UN10403        --> TAAGTCTGTCATCGGAAGTCCTTTCTATGTTTATGTCTCTGGTGATCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544400       <-- TAAGTCTGTCATCGGAAGTCCTTTCTATGTTTATGTCTCTGGTGATCTTT
EV540738       <-- TAAGTCTGTCATCGGAAGTCCTTTCTATGTTTATGTCTCTGGTGATCTTT
FD976558       <-- TAAGTCTGTCATCGGAAGTCCTTTCTATGTTTATGTCTCTGGTGATCTTT
EX909765       <-- TAAGTCTGTCATCGGAAGTCCTTTCTATGTTTATGTCTCTGGTGATCTTT
EV543472       <-- TAAGTCTGTCATCGGAAGTTCTTTCTATGTTTATGTCTTTGGTGATCTTT
EX769362       <-- TAAGTCTGTCATCGGAAGTCCTTTCTATGTTTATGTCTCTGGTGATCTTT
EW737311       <-- TAAGTCTGTCATCGGAAGTCCTTTCTATGTTTATGTCTCTGGTGATCTTT
EY917656       <-- TAAGTCTGTCATCGGAAGTCCTTTCTATGTTTATGTCTCTGGTGATCTTT
EY917777       <-- TAAGTCTGTCATCGGAAGTCCTTTCTATGTTTATGTCTCTGGTGATCTTT
EV548785       --> ..................................................
EX747215       --> ..................................................
EV536244       --> ..................................................
EV552476       --> ..................................................
EW722967       --> ..................................................
EW723526       --> ..................................................
EW725692       --> ..................................................
EX757733       --> ..................................................
EX894714       --> ..................................................
EY900162       --> ..................................................
EY921669       --> ..................................................
FD568338       --> ..................................................
FD569379       --> ..................................................
FD962353       --> ..................................................
FD964617       --> ..................................................
FY441978       --> ..................................................
FY441432       --> ..................................................
FY441586       --> ..................................................
FY441597       --> ..................................................
EW724441       --> ..................................................
EV547636       --> ..................................................
EY921527       --> TAAGTCTGTCATCGGAAGTCCTTTCTATGTTTATGTCTCTGGTGATCTTT
EW732637       --> TAAGTCTGTCATCGGAAGTCCTTTCTATGTTTATGTCTCTGGTGATCTTT
EY931057       --> TAAGTCTGTCATCGGAAGTCCTTTCTATGTTTATGTCTCTGGTGATCTTT

               1101   -   1151
UN10403        --> GAATAAGTTCTTTTACTTTTCCTGTTTCTGTTTGAACCTGCTAAAGTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544400       <-- GAATAAGTTCTTTTACTTTTCCTGTTTCTGTTTGAACCTGCTAAAGTTTT
EV540738       <-- GAATAAGTTCTTTTACTTTTCCTGTTTCTGTTTGAAGCTGCTAAAGTTTT
FD976558       <-- GAATAAGTTCTTTTACTTTTCCTGTTTCTGTTTGAAGCTGCTAAAGTTTT
EX909765       <-- GTATAAGTTCTTTTACTTTTCCTGTTTCTGTTTGAACCTGCTAAAGTTTT
EV543472       <-- GAATAAGTTCTTTTACTTTTCCTGTTTCTGTTTGAACCTGCTAAAGTTTT
EX769362       <-- GTATAAGTTCTTTTACTTTTCCTGTTTCTGTTTGAACCTGCTAAAGTTTT
EW737311       <-- GAATAAGTTCTTTTACTTTTCCTGTTTCTGTTTGAACCTGCTAAAGTTTT
EY917656       <-- GAATAAGTTCTTTTACTTTTCCTGTTTCTGTTTGAACCTGCTAAAGTTTT
EY917777       <-- GAATAAGTTCTTTTACTTTTCCTGTTTCTGTTTGAACCTGCTAAAGTTTT
EV548785       --> ..................................................
EX747215       --> ..................................................
EV536244       --> ..................................................
EV552476       --> ..................................................
EW722967       --> ..................................................
EW723526       --> ..................................................
EW725692       --> ..................................................
EX757733       --> ..................................................
EX894714       --> ..................................................
EY900162       --> ..................................................
EY921669       --> ..................................................
FD568338       --> ..................................................
FD569379       --> ..................................................
FD962353       --> ..................................................
FD964617       --> ..................................................
FY441978       --> ..................................................
FY441432       --> ..................................................
FY441586       --> ..................................................
FY441597       --> ..................................................
EW724441       --> ..................................................
EV547636       --> ..................................................
EY921527       --> GAATAAGTTCTTTTACTTTTCCTGTTTCTGTTTGAACCTGCTAAAGTTTT
EW732637       --> GAATAAGTTCTTTTACTTTTCCTGTTTCTGTTTGAACCTGCTAAAGTTTT
EY931057       --> GAATAAGTTCTTTTACTTTTCCTGTTTCTGTTTGAAGCTGCTAAAGTTTT

               1151   -   1201
UN10403        --> ATATAAGTAATATCTCTTTGTGAATG...
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV544400       <-- ATATAAGTAATATCTCTTTGcg.......
EV540738       <-- ATATAAGTAATATCTCTTTGc........
FD976558       <-- ATATAAGTAATATCTCTTTGTG.......
EX909765       <-- ATATAAGTAATATCTCTTTGTGAATGcg.
EV543472       <-- ATATAAGTAATATCTCTTTGTGAATGtg.
EX769362       <-- ATATAAGTAATATCTCTTTGTGAATGcg.
EW737311       <-- ATATAAGTAAT..................
EY917656       <-- ATATAAGTAATATCTCTTTGc........
EY917777       <-- ATATAAGTAATATCTCTTTGc........
EV548785       --> .............................
EX747215       --> .............................
EV536244       --> .............................
EV552476       --> .............................
EW722967       --> .............................
EW723526       --> .............................
EW725692       --> .............................
EX757733       --> .............................
EX894714       --> .............................
EY900162       --> .............................
EY921669       --> .............................
FD568338       --> .............................
FD569379       --> .............................
FD962353       --> .............................
FD964617       --> .............................
FY441978       --> .............................
FY441432       --> .............................
FY441586       --> .............................
FY441597       --> .............................
EW724441       --> .............................
EV547636       --> .............................
EY921527       --> ATATAAGTAATATCTCTTTGcaaaaaaaa
EW732637       --> ATATAAGTAATATCTCTTTGTGAATGtg.
EY931057       --> ATATAAGTAATATCTCTTTGTG.......