RadishBase

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Alignment for radish unigene UN10500

               1      -     51
UN10500        --> GGACAAAAGATGAAGAGCAACACTCTTATTTATCATATAGTCTTAAGCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX889548       <-- ..................................................
FD534127       <-- ..................................................
FD560362       <-- ..................................................
FY449809       <-- ..................................................
EW715682       <-- ..................................................
EX748068       <-- ..................................................
EX887830       <-- ..................................................
EY898943       <-- ..................................................
EY930467       <-- ..................................................
FD989717       <-- ..................................................
FD543902       <-- ..................................................
FD556694       <-- ..................................................
EX756248       <-- ..................................................
EY926661       --> GGACAAAAGATGAAGAGCAACACTCTTATTTATCATATAGTCTTAAGCAT
FD539634       --> GGACAAAAGATGAAG--CAACACTCTTATTTATCATATAGTCTTAAGCAT
FD530140       --> ............cgaAGCAACACTCTTATTTATCATATAGTCTTAAGCAT
FD552950       --> ..................................................
FD555936       --> ..................................................
FD985464       --> ..................................................
FY446116       --> ..................................................
FY430595       --> ..................................................
EW719387       --> ..................................................
EX752117       --> ..................................................
EX891883       --> ..................................................
EY894856       --> ..................................................
EX760104       --> ..................................................

               51     -    101
UN10500        --> TCCACAAACCACAAGTGCGTTAACTAAGATGAAGCATACGTGCATGAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX889548       <-- ..................................................
FD534127       <-- ..................................................
FD560362       <-- ..................................................
FY449809       <-- ..................................................
EW715682       <-- ..................................................
EX748068       <-- ..................................................
EX887830       <-- ..................................................
EY898943       <-- ..................................................
EY930467       <-- ..................................................
FD989717       <-- ..................................................
FD543902       <-- ..................................................
FD556694       <-- ..................................................
EX756248       <-- ..................................................
EY926661       --> TCCACAAACCACAAGTGCGTTAACTAAGATGAAGCATACGTGCATGAAAT
FD539634       --> TCCACAGACCACAAGTGCGTTAACTAAGATGAAGCATACGTGCATGAAAT
FD530140       --> TCCACAAACCACAAGTGCGTTAACTAAGATGAAGCATACGTGCATGAAAT
FD552950       --> ............................................cGAAAT
FD555936       --> ..................................................
FD985464       --> ..................................................
FY446116       --> ..................................................
FY430595       --> ..................................................
EW719387       --> ..................................................
EX752117       --> ..................................................
EX891883       --> ..................................................
EY894856       --> ..................................................
EX760104       --> ..................................................

               101    -    151
UN10500        --> TCAAATCAAAGCTAAGATGAAGCAACACTCTTATTTATCAGATAGTCTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX889548       <-- ............................TCTTATTTATCAGATAGTCTTA
FD534127       <-- ..................................................
FD560362       <-- ..................................................
FY449809       <-- ..................................................
EW715682       <-- ..................................................
EX748068       <-- ..................................................
EX887830       <-- ..................................................
EY898943       <-- ..................................................
EY930467       <-- ..................................................
FD989717       <-- ..................................................
FD543902       <-- ..................................................
FD556694       <-- ..................................................
EX756248       <-- ..................................................
EY926661       --> TAAAATCAAAGCTAAGATGAAGCAACACTCTTATTTATCAGATAGTCTTA
FD539634       --> TCAAATCAAAGCTAAGATGAAGCAACACTCTTATTTATCAGATAGTCTTA
FD530140       --> TCAAATCAAAGCTAAGATGAAGCAACACTCTTATTTATCAGATAGTCTTA
FD552950       --> TCAAATCAAAGCTAAGATGAAGCAACACTCTTATTTATCAGATAGTCTTA
FD555936       --> .....cCAAAGCTAAGATGAAGCAACACTCTTATTTATCAAATAGTCTTA
FD985464       --> ......CAAAGCTAAGATGAAGCAACACTCTTATTTATCAAATAGTCTTA
FY446116       --> ..............AGATGAAGCA-CACTCTTATTTATCAGATAGTCTTA
FY430595       --> ....................gagcACACTCTTATTTATCAGATAGTCTTA
EW719387       --> ............................TCTTATTTATCAGATAGTCTTA
EX752117       --> ............................TCTTATTTATCAGATAGTCTTA
EX891883       --> ............................TCTTATTTATCAGATAGTCTTA
EY894856       --> ............................TCTTATTTATCAGATAGTCTTA
EX760104       --> ..................................................

               151    -    201
UN10500        --> AGCATTCTACAAACCACAAGTGCGTTCACTAAGAAAACAAAGTCAAAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX889548       <-- AGCATTCTACAAACCACAAGTGCGT-CACTAAGAAAACAAAGTCAAAGGA  Raphanus sativus var. oleiformis
FD534127       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD560362       <-- ..................................................  Raphanus raphanistrum subsp. landra
FY449809       <-- ..................................................  Raphanus sativus cv GSK3-1
EW715682       <-- ..................................................  Raphanus sativus var. oleiformis
EX748068       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX887830       <-- ..................................................  Raphanus sativus var. oleiformis
EY898943       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY930467       <-- ..................................................  Raphanus sativus var. oleiformis
FD989717       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD543902       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556694       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX756248       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY926661       --> AGCATTCTACAAACCACAAGTGCGTTCACTAAGAAAACAAAGTCAAAGGA  Raphanus sativus var. oleiformis
FD539634       --> AGTATTCCACAAACCACAAGTGCGTTAACTAAGAAAACAAAGTCAAAGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530140       --> AGCATTCCACAAACCACAAATGCGTTAACTAAGAAAACAAAGTCAAAGGA  Raphanus raphanistrum subsp. maritimus
FD552950       --> AGCATTCCACAAACCACAAGTGCGTTAACTAAGAAAACAAAGTCAAAGGA  Raphanus raphanistrum subsp. landra
FD555936       --> AGCATTCCACAAACCACAAGTGCGTTAACTAAGAAAACAAAGTCAAAGGA  Raphanus raphanistrum subsp. landra
FD985464       --> AGCATTCCACAAACCACAAGTGCGTTAACTAAGAAAACAAAGTCAAAGGA  Raphanus raphanistrum subsp. landra
FY446116       --> AGCATTCTACAAACCACAAGTGCGTTCACTAAGAAAACAAAGTCAAAGGA  Raphanus sativus cv GSK3-1
FY430595       --> AGCATTCTACAAACCACAAGTGCGTTCACTAAGAAAACAAAGTCAAAGGA  Raphanus sativus cv GSK3-1
EW719387       --> AGCATTCTACAAACCACAAGTGCGTTCACTAAGAAAACAAAGTCAAAGGA  Raphanus sativus var. oleiformis
EX752117       --> AGCATTCTACAAACCACAAGTGCGTTCACTAAGAAAACAAAGTCAAAGGA  Raphanus raphanistrum subsp. maritimus
EX891883       --> AGCATTCTACAAACCACAAGTGCGTTCACTAAGAAAACAAAGTCAAAGGA  Raphanus sativus var. oleiformis
EY894856       --> AGCATTCCACAAACCACAAGTGCGTTAACTAAGAAAACAAAGTCAAAGGA  Raphanus raphanistrum subsp. maritimus
EX760104       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               201    -    251
UN10500        --> AAATAAGAGACGATAGTTATAT----GGGTTTCATCTAGATCATGGAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX889548       <-- AAATAAGAGACGATAGTTATATATATGGGTTTCATCTAGATCATGGAAAG
FD534127       <-- .........ACGATAGT-ATAT----GG-TTTCATCTAGATCATGGAAAG
FD560362       <-- ..................................................
FY449809       <-- ..................................................
EW715682       <-- ..................................................
EX748068       <-- ..................................................
EX887830       <-- ..................................................
EY898943       <-- ..................................................
EY930467       <-- ..................................................
FD989717       <-- ..................................................
FD543902       <-- ..................................................
FD556694       <-- ..................................................
EX756248       <-- ..................................................
EY926661       --> AAATAAGAAACGATAGTTATAT----GGGTTTCATCTAGATCATGGAAAG
FD539634       --> AAATAAGAAACGATAGTTATAT----GGGTTTCATCTAGATCATGGAAAG
FD530140       --> AAATAAGAGACGATAGTTATAT----GGGTTTCATCTAGATCATGGAAAG
FD552950       --> AAATAAGAGACGATAGTTATAT----GGGTTTCATCTAGATCATGGAAAG
FD555936       --> AAATAAGAGACGATAGTTATAT----GGGTTTCATCTAGATCATGGAAAG
FD985464       --> AAATAAGAGACGATAGTTATAT----GAGTTTCATCTAGATCATGGAAAG
FY446116       --> AAATAAGAGACGATAGTTATAT----GGGTTTCATCTAGATCATGGAAAG
FY430595       --> AAATAAGAGACGATAGTTATAT----GGGTTTCATCTAGATCATGGAAAG
EW719387       --> AAATAAGAGACGATAGTTATAT----GGGTTTCATCTAGATCATGGAAAG
EX752117       --> AAATAAGAGACGATAGTTATAT----GGGTTTCATCTAGATCATGGAAAG
EX891883       --> AAATAAGAGACGATAGTTATAT----GGGTTTCATCTAGATCGTGGAAAG
EY894856       --> AAATAAGAGACGATAGTTATAT----GGGTTTCATCTAGATCATGGAAAG
EX760104       --> ............................................GGAAAG

               251    -    301
UN10500        --> AGCCTCCTCGAGTATGCCATCTTCCAAAACAGACATGAAACTTTCAGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX889548       <-- AGCCTCCTCGAGTATGCCATCTTCCAAAACAGACATGAAACTTTCAGTGT
FD534127       <-- AGC-T-CTCGAGTATGCCATCT-CCAAA-CAGACATGAAACTTTCAGTGT
FD560362       <-- ....................tcTCCAAAACAGACATGAAACTTTCAGTGT
FY449809       <-- ..................................................
EW715682       <-- ..................................................
EX748068       <-- ..................................................
EX887830       <-- ..................................................
EY898943       <-- ..................................................
EY930467       <-- ..................................................
FD989717       <-- ..................................................
FD543902       <-- ..................................................
FD556694       <-- ..................................................
EX756248       <-- ..................................................
EY926661       --> AGCCTCCTCGAGTATGCCATCTTCCAAAACAGACATGAAACTTTCAGTGT
FD539634       --> AGCCTCCTCGAGTATGCCATCTTCCAAAACAGACATGAAACTTTCAGTGT
FD530140       --> AGCCTCCTCGAGTATGCCATCTTCCAAAACAGACATGAAACTTTCAGTGT
FD552950       --> AGCCTCCTCGAGTATGCCATCTTCCAAAACAGACATGAAACTTTCAGTGT
FD555936       --> AGCCTCCTCGAGTATGCCATCTTCCAAAACAGACATGAAACTTTCAGTGT
FD985464       --> AGCCTCCTCGAGTATGCCATCTTCCAAAACAGACATGAAACTTTCAGTGT
FY446116       --> AGCCTCCTCGAGTATGCCATCTTCCAAAACAGACATGAAACTTTCAGTGT
FY430595       --> AGCCTCCTCGAGTATGCCATCTTCCAAAACAGACATGAAACTTTCAGTGT
EW719387       --> AGCCTCCTCGAGTATGCCATCTTCCAAAACAGACATGAAACTTTCAGTGT
EX752117       --> AGCCTCCTCGAGTATGCCATCTTCCAAAACAGACATGAAACTTTCAGTGT
EX891883       --> AGCCTCCTCGAGTATGCCATCTTCCAAAACAGACATGAAACTTTCAGTGT
EY894856       --> AGCCTCCCCGAGTATGCCATCTTCCAAAACAGACATGAAACTTTCAGTGT
EX760104       --> AGTCTCCTCGAGTATGCCATCTTCCAAAACAGACATGAAACTTTCAGTGT

               301    -    351
UN10500        --> TTCTGGCGGAACAGTTTGCACGAATCTCTCCTTGTGACCCCGTCAAAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX889548       <-- TTCTGGCGGAACAGTTTGCACGAATCTCTCCTTGTGACCCCGTCAAAACA
FD534127       <-- T-CTGGCGGAACAGTTTGCACGAATCTCTC-TTGTGACCCCGTCAAAACA
FD560362       <-- T-CTGGCGGAACAGTT-GCACGAATCTCTCATTGTGACCCCGTCAAAACA
FY449809       <-- ..................................................
EW715682       <-- ..................................................
EX748068       <-- ..................................................
EX887830       <-- ..................................................
EY898943       <-- ..................................................
EY930467       <-- ..................................................
FD989717       <-- ..................................................
FD543902       <-- ..................................................
FD556694       <-- ..................................................
EX756248       <-- ..................................................
EY926661       --> TTCTGGCGGAACAGTTTGCACGAATCTCTCCTTGTGACCCCGTCAAAACA
FD539634       --> TTCTGGCGGAACAGTTTGCACGAATCTCTCCTTGTGACCCCGTCAAAACA
FD530140       --> TTCTGGCGGAACAGTTTGCACGAATCTCTCCTTGTGACCCCGTCAAAACA
FD552950       --> TTCTGGCGGAACAGTTTGCACGAATCTCTCCTTGTGACCCCGTCAAAACA
FD555936       --> TTCTGGCGGAACAGTTTGCACGAATCTCTCATTGTGACCCCGTCAAAACA
FD985464       --> TTCTGGCGGAACAGTTTGCACGAATCTCTCCTTGTGACCCCGTCAAAACA
FY446116       --> TTCTGGCGGAACAGTTTGCACGAATCTCTCCTTGTGACCCCGTCAAAACA
FY430595       --> TTCTGGCGGAACAGTTTGCACGAATCTCTCCTTGTGACCCCGTCAAAACA
EW719387       --> TTCTGGCGGAACAGTTTGCACGAATCTCTCCTTGTGACCCCGTCAAAACA
EX752117       --> TTCTGGCGGAACAGTTTGCACGAATCTCTCCTTGTGACCCCGTCAAAACA
EX891883       --> TTCTGGCGGAACAGTTTGCACGAATCTCTCCTTGTGACCCCGTCAAAACA
EY894856       --> TTCTGGCGGAACAGTTTGCACGAATCTCTCCTTGTGACCCCGTCAAAACA
EX760104       --> TTCTGGCGGAACAGTTTGCACGAATCTCTCCTTGTGACCCCGTCAAAACA

               351    -    401
UN10500        --> CTCATCTGACCCATCTTGATCATCCCCACCACAAAATGATCAAAAAACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX889548       <-- CTCATCTGACCCATCTTGATCATCCCCACCACAAAATGATCAAAAAACAG
FD534127       <-- CTCATCTGACCCATCTTGATCATCCCCACCACAAAATGATCAAAAAACAG
FD560362       <-- CTCATCTGACCCATCTTGATCATCCCCACCACAAAATGATCAAAAAACAG
FY449809       <-- ..................................................
EW715682       <-- ..................................................
EX748068       <-- ..................................................
EX887830       <-- ..................................................
EY898943       <-- ..................................................
EY930467       <-- ..................................................
FD989717       <-- ..................................................
FD543902       <-- ..................................................
FD556694       <-- ..................................................
EX756248       <-- ..................................................
EY926661       --> CTCATCTGACCCATCTTGATCATCCCCACCACAAAATGATCAAAAAACAG
FD539634       --> CTCATCTGACCCATCTTGATCATCCCCACCACAAAATGATCAAAAAACAG
FD530140       --> CTCATCTGACCCATCTTGATCATCCCCACCACAAAATGATCAAAAAACAG
FD552950       --> CTCATCTGACCCATCTTGATCATCCCCACCACAAAATGATCAAAAAACAG
FD555936       --> CTCATCTGACCCATCTTGATCATCCCCACCACAAAATGATCAAAAAACAG
FD985464       --> CTCATCTGACCCATCTTGATCATCCCCACCACAAAATGATCAAAAAACAG
FY446116       --> CTCATCTGACCCATCTTGATCATCCCCACCACAAAATGATCAAAAAACAG
FY430595       --> CTCATCTGACCCATCTTGATCATCCCCACCACAAAATGATCAAAAAACAG
EW719387       --> CTCATCTGACCCATCTTGATCATCCCCACCACAAAATGATCAAAAAACAG
EX752117       --> CTCATATGACCCATCTTGATCATCCCCACCACAAAATGATCAAAAAACAG
EX891883       --> CTCATCTGACCCATCTTGATCATCCCCACCACAAAATGATCAAAAAACAG
EY894856       --> CTCATCTGACCCATCTTGATCATCCCCACCACAAAATGATCAAAAAACAG
EX760104       --> CTCATCTGACCCATCTTGATCATCCCCACCACAAAATGATCAAAAAACAG

               401    -    451
UN10500        --> CTTCTGGTCGATCGCAAAGCTCTCCACGATACCACGTGTCCTCTTGTCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX889548       <-- CTTCTGG-CGATCGCAAAGCTCTCCACGATACCACGTGTCCTCTGGTCCG
FD534127       <-- CTTCTGGTCGATCGCAAAGCTCTCCACGATACCACGTGTCCTCTTGTCCG
FD560362       <-- CTTCTGGTCGATCGCAAAGCTCTCCACGATACCACGTGTCCTCTTGTCCG
FY449809       <-- ..................................................
EW715682       <-- ..................................................
EX748068       <-- ..................................................
EX887830       <-- ..................................................
EY898943       <-- ..................................................
EY930467       <-- ..................................................
FD989717       <-- ..................................................
FD543902       <-- ..................................................
FD556694       <-- ..................................................
EX756248       <-- ..................................................
EY926661       --> CTTCTGGTCGATCGCAAAGCTCTCCACGATACCACGTGTCCTCTTGTCCG
FD539634       --> CTTCTGGTCGATCGCAAAGCTCTCCACGATACCACGTGTCCTCTTGTCCG
FD530140       --> CTTCTGGTCGATCGCAAAGCTCTCCACGATACCACGTGTCCTCTTGTCCG
FD552950       --> CTTCTGGTCGATCGCAAAGCTCTCCACGATACCACGTGTCCTCTTGTCCG
FD555936       --> CTTCTGGTCGATCGCAAAGCTCTCCACGATACCACGTGTCCTCTTGTCCG
FD985464       --> CTTCTGGTCGATCGCAAAGCTCTCCACGATACCACGTGTCCTCTTGTCCG
FY446116       --> CTTCTGGTCGATCGCAAAGCTCTCCACGATACCACGTGTCCTCTTGTCCG
FY430595       --> CTTCTGGTCGATCGCAAAGCTCTCCACGATACCACGTGTCCTCTTGTCCG
EW719387       --> CTTCAGGTCGATCGCAAAGCTCTCCACGATACCACGTGTCCTCTTGTCCG
EX752117       --> CTTCTGGTCGATCGCAAAGCTCTCCACGATACCACGTGTCCTCTTGTCCG
EX891883       --> CTTCTGGTCGATCGCAAAGCTCTCCACGATACCACGTGTCCTCTTGTCCG
EY894856       --> CTTCTGGTCGATCGCAAAGCTCTCCACGATACCACGTGTCCTCTTGTCCG
EX760104       --> CTTCTGGTCGATCGCAAAGCTCTCCACGATACCACGTGTCCTCTTGTCCG

               451    -    501
UN10500        --> TGAACAGGTCCTGGTCGGATGTGAATAGCCCTTGTCGGTTCATGAGATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX889548       <-- TGAACAGGTCCTGGTCGGATGTGAATAGCCCTTGTCGGTTCGTGAGATCA
FD534127       <-- TGAACAGGTCCTGGTCGGATGTGAATAGCCCTTGTCGGTTCATGAGATCA
FD560362       <-- TGAACAGGTCCTGGTCGGATGTGAATAGCCCTTGTCGGTTCATGAGATCA
FY449809       <-- ........................................CATGAGATCA
EW715682       <-- .........................................ATGAGATCA
EX748068       <-- ..................................................
EX887830       <-- ..................................................
EY898943       <-- ..................................................
EY930467       <-- ..................................................
FD989717       <-- ..................................................
FD543902       <-- ..................................................
FD556694       <-- ..................................................
EX756248       <-- ..................................................
EY926661       --> TGAACAGGTCCTGGTCGGATGTGAATAGCCCTTGTCGGTTCATGAGATCA
FD539634       --> TGAACAGGTCCTGGTCGGATGTGAATAGCCCTTGTCGGTTCATGAGATCA
FD530140       --> TGAACAGGTCCTGGTCGGATGTGAATAGCCCTTGTCGGTTCATGAGATCA
FD552950       --> TGAACAGGTCCTGGTCGGATGTGAATAGCCCTTGTCGGTTCATGAGATCA
FD555936       --> TGAACAGGTCCTGGTCGGATGTGAATAGCCCTTGTCGGTTCATGAAATCA
FD985464       --> TGAACAGGTCCTGGTCGGATGTGAATAGCCCTTGTCGGTTCATGAGATCA
FY446116       --> TGAACAGGTCCTGGTCGGATGTGAATAGCCCTTGTCGGTTCATGAGATCA
FY430595       --> TGAACAGGTCCTGGTCGGATGTGAATAGCCCTTGTCGGTTCATGAGATCA
EW719387       --> TGAACAGGTCCTGGTCGGATGTGAATAGCCCTTGTCGGTTCATGAGATCA
EX752117       --> TGAACAGGTCCTGGTCGGATGTGAATAGCCCTTGTCGGTTCATGAGATCA
EX891883       --> TGAACAGGTCCTGGTCGGATGTGAATAGCCCTTGTCGGTTCATGAGATCA
EY894856       --> TGAACAGGTCCTGGTCGGATGTGAATAGCCCTTGTCGGTTCATGAGATCA
EX760104       --> TGAACAGGTCCTGGTCGGATGTGAATAGCCCTTGTCGGTTCATGAGATCA

               501    -    551
UN10500        --> ACGTAGTACTTGTTGTCAAACACGTCAGGGCTCCTTATGTCATTCACTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX889548       <-- ACGTAGTACTTGTTGTCAAACACGTCAGGGCTCCTTATGTCATTCACTTG  Raphanus sativus var. oleiformis
FD534127       <-- ACGTAGTACTTGTTGTCAAACACGCCAGGGCTCCTTATGTCATTCACTCG  Raphanus raphanistrum subsp. maritimus
FD560362       <-- ACGTAGTACTTGTTGTCAAACACGCCAGGGCTCCTTATGTCATTCACTTG  Raphanus raphanistrum subsp. landra
FY449809       <-- ACGTAGTACTTGTTGTCAAACACGTCAGGGCTCCTTATGTCATTCACTTG  Raphanus sativus cv GSK3-1
EW715682       <-- ACGTAGTACTTGT-GTCAAACACGTCAGGGCTC-TTATGTAATTCACTTG  Raphanus sativus var. oleiformis
EX748068       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX887830       <-- ..................................................  Raphanus sativus var. oleiformis
EY898943       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY930467       <-- ..................................................  Raphanus sativus var. oleiformis
FD989717       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD543902       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556694       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX756248       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY926661       --> ACGTAGTACTTGTTGTCAAACACGTCAGGGCTCC................  Raphanus sativus var. oleiformis
FD539634       --> ACGTAGTACTTGTTGTCAAACACGTCAGGGCTCCTTATGTCATTCACTTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530140       --> ACGTAGTACTTGTTGTCAAACACGCCAGGGCTCCTTATGTCATTCACTCG  Raphanus raphanistrum subsp. maritimus
FD552950       --> ACGTAGTACTTGTTGTCAAACACGCCAGGGCTCCTTATGTCATTCACTTG  Raphanus raphanistrum subsp. landra
FD555936       --> ACGTAGTACTTGTTGTCAAACACGCCAGGGCTCCTTATGTCATTCACTTG  Raphanus raphanistrum subsp. landra
FD985464       --> ACGTAGTACTTGTTGTCAAACACGCCAGGGCTCCTTATGTCATTCACTTG  Raphanus raphanistrum subsp. landra
FY446116       --> ACGTAGTACTTGTTGTCAAACACGTCAGGGCTCCTTATGTCATTCACTTG  Raphanus sativus cv GSK3-1
FY430595       --> ACGTAGTACTTGTTGTCAAACACGTCAGGGCTCCTTATGTCATTCACTTG  Raphanus sativus cv GSK3-1
EW719387       --> ACGTAGTACTTGTTGTCAAACACGTCAGGGCTCCTTATGTAATTCACTTG  Raphanus sativus var. oleiformis
EX752117       --> ACGTAGTACTTGTTGTCAAACACGTCAGGGCTCCTTATGTCATTCACTTG  Raphanus raphanistrum subsp. maritimus
EX891883       --> ACGTAGTACTTGTTGTCAAACACGTCAGGGCTCCTTATGTCATTCACTTG  Raphanus sativus var. oleiformis
EY894856       --> ACGTAGTACTTGTTGTCAAACACGCCAGGGCTCCTTATGTCATTCACTTG  Raphanus raphanistrum subsp. maritimus
EX760104       --> ACGTAGTACTTGTTGTCAAACACGTCAGGGCTCCTTATGTCATTCACTTG  Raphanus raphanistrum subsp. raphanistrum (MS)

               551    -    601
UN10500        --> CGTGTTGCTCGAGTTAGCAGTGGGGCAAGTGCGTTTGAGGTTGTTGGCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX889548       <-- CGTGTTGCTCGAGTTAGTGGTGGGGCAAGTGCGTTTGAGGTTGTTGGCGA  Raphanus sativus var. oleiformis
FD534127       <-- CGTGTTGCTCGAGTTAGCAGTGGGGCAAGTGCGTTTGAGGTTGTTGGCGA  Raphanus raphanistrum subsp. maritimus
FD560362       <-- CGTGTTGCTCGAGTTAGCAGTGGGGCAAGTGCGTTTGAGGTTGTTGGCGA  Raphanus raphanistrum subsp. landra
FY449809       <-- CGTGTTGCTCGAGTTAGTGGTGGGGCAAGTGCGTTTGAGGTTGTTGGCGA  Raphanus sativus cv GSK3-1
EW715682       <-- CGTGTTGCTCGAGTTAGTGGTGGGGCAAGTGCGTTTGAGGTTGTTGGCGA  Raphanus sativus var. oleiformis
EX748068       <-- ...........................................gTGGCGA  Raphanus raphanistrum subsp. maritimus
EX887830       <-- ..................................................  Raphanus sativus var. oleiformis
EY898943       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY930467       <-- ..................................................  Raphanus sativus var. oleiformis
FD989717       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD543902       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556694       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX756248       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY926661       --> ..................................................  Raphanus sativus var. oleiformis
FD539634       --> CGTGTTGCTCGAGTTAGCAGTGGGGCAAGTGCGTTTGAGGTTGTTGGCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530140       --> CGTGTTGCTCGAGTTAGCAGTGGGGCAAGTGCGTTTGAGGTTGTTGGCGA  Raphanus raphanistrum subsp. maritimus
FD552950       --> CGTGTTGCTCGAGTTAGCAGTGGGGCAAGTGCGTTTGAGGTTGTTGGCGA  Raphanus raphanistrum subsp. landra
FD555936       --> CGTGTTGCTCGAGTTAGCAGTGGGGCAAGTGCGTTTGAGGTTGTTGGCGA  Raphanus raphanistrum subsp. landra
FD985464       --> CGTGTTGCTCGAGTTAGCAGTGGGGCAAGTGCGTTTGAGGTTGTTGGCGA  Raphanus raphanistrum subsp. landra
FY446116       --> CGTGTTGCTCGAGTTAGTGGTGGGGCAAGTGCGTTTGAGGTTGTTGGCGA  Raphanus sativus cv GSK3-1
FY430595       --> CGTGTTGCTCGAGTTAGTGGTGGGGCAAGTGCGTTTGAGGTTGTTGGCGA  Raphanus sativus cv GSK3-1
EW719387       --> CGTGTTGCTCGAGTTAGTGGTGGGGCAAGTGCGTTTGAGGTTGTTGGCGA  Raphanus sativus var. oleiformis
EX752117       --> CGTGTTGCTCGAGTTAGTGGTGGGGCAAGTGCGTTTGAGGTTGTTGGCGA  Raphanus raphanistrum subsp. maritimus
EX891883       --> CGTGTTGCTCGAGTTAGTGGTGGGGCAAGTGCGTTTGAGGTTGTTGGCGA  Raphanus sativus var. oleiformis
EY894856       --> CGTGTTGCTCGAGTTAGCAGTGGGGCAAGTGCGTTTGAGGTTGTTGGCGA  Raphanus raphanistrum subsp. maritimus
EX760104       --> CGTGTTGCTCGAGTTAGCAGTGGGGCAAGTGCGTTTGAGGTTGTTGGCGA  Raphanus raphanistrum subsp. raphanistrum (MS)

               601    -    651
UN10500        --> AAGACTTGTTCATTGTTGGGTCTTGGTTCGGGTAGAGCCTGTCTGTGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX889548       <-- AAGACTTGTTCATTGTTGGGTCTTGGTTCGGGTAGAGCCTGTCTGTGAAA
FD534127       <-- AAGACTTGTTCATTGTTGGGTCTTGGTTCGGGTAGAGCCTGTCTGTGAAA
FD560362       <-- AAGACTTGTTCATTGTTGGGTCTTGGTTCGGGTAGAGCCTGTCTGTGGAA
FY449809       <-- AAGACTTGTTCATTGTTGGGTCTTGGTTCGGGTAGAGCCTGTCTGTGAAA
EW715682       <-- AAGACTTGTTCATTGTTGGGTCTTGGTTCGGGTAGAGCCTGTCTGTGAAA
EX748068       <-- AAGACTTGTTCAT-G-TGGGTCTTG-TTCGGGTAGAGC-TGTCTGTGAAA
EX887830       <-- .........................GTTCGGGTAGAGCCTGTCTGTGAAA
EY898943       <-- ........................................GTCTGTGAAA
EY930467       <-- ..................................................
FD989717       <-- ..................................................
FD543902       <-- ..................................................
FD556694       <-- ..................................................
EX756248       <-- ..................................................
EY926661       --> ..................................................
FD539634       --> AAGACTTGTTCATTGTTGGGTCTTGGTTCGGGTAGAGCCTGTCTGTGAAA
FD530140       --> AAGACTTGTTCATTGTTGGGTCTTGGTTCGGGTAGAGCCTGTCTGTGAAA
FD552950       --> AAGACTTGTTCATTGTTGGGTCTTGGTTCGGGTAGAGCCTGTCTGTGAAA
FD555936       --> AAGACTTGTTCATTGTTGGGTCTTGGTTCGGGTAGAGCCTGTCTGTGGAA
FD985464       --> AAGACTTGTTCATTGTTGGGTCTTGGTTCGGGTAGAGCCTGTCTGTGAAA
FY446116       --> AAGACTTGTTCATTGTTGGGTCTTGGTTCGGGTAGAGCCTGTCTGTGAAA
FY430595       --> AAGACTTGTTCATTGTTGGGTCTTGGTTCGGGTAGAGCCTGTCTGTGAAA
EW719387       --> AAGACTTGTTCATTGTTGGGTCTTGGTTCGGGTAGAGCCTGTCTGTGAAA
EX752117       --> AAGACTTGTTCATTGTTGGGTCTTGGTTCGGGTAGAGCCTGTCTGTGAAA
EX891883       --> AAGACTTGTTCATTGTTGGGTCTTGGTTCGGGTAGAGCCTGTCTGTGAAA
EY894856       --> AAGACTTGTTCATTGTTGGGTCTTGGTTCGGGTAGAGCCTGTCTGTGAAA
EX760104       --> AAGACTTGTTCATTGTTGGGTCTTGGTTCGGGTAGAGCCTGTCTGTGAAA

               651    -    701
UN10500        --> GATGGACAATGCGCGATCCCGATGGTGTGTCCACCGGAGAGTGCAACTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX889548       <-- GATGGACAATGCGCGATCCCGATGGTGTGTCCACCGGAGAGTGCAACTAA  Raphanus sativus var. oleiformis
FD534127       <-- GACGGACAATGCGCGATCCCGATGGTGTGTCCACCAGAAAGTGCTACTAA  Raphanus raphanistrum subsp. maritimus
FD560362       <-- GACGGACAATGCGCGATCCCGATGGTGTGTCCACCAGAAAGTGCTACTAA  Raphanus raphanistrum subsp. landra
FY449809       <-- GATGGACAATGCGCGATCCCGATGGTGTGTCCACCGGAGAGTGCAACTAA  Raphanus sativus cv GSK3-1
EW715682       <-- GATGGACAATGCGCGATCCCGATGGTGTGTCCACCGGAGAGTGCAACTAA  Raphanus sativus var. oleiformis
EX748068       <-- GATGGACAATGCGCGATCCCGATGGTGTGTCCAC-GGAGAGTGCAACTAA  Raphanus raphanistrum subsp. maritimus
EX887830       <-- GATGGACAATGCGCGATCCCGATGGTGTGTCCACCGGAGAGTGCAACTAA  Raphanus sativus var. oleiformis
EY898943       <-- GACGGACAATGCGCGATCCCGATGGTGTGTCCACCAGAAAGTGCTACTAA  Raphanus raphanistrum subsp. maritimus
EY930467       <-- ......................................GAGTGCAACTAA  Raphanus sativus var. oleiformis
FD989717       <-- ....................................gaaAGTGCTACTAA  Raphanus raphanistrum subsp. landra
FD543902       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556694       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX756248       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY926661       --> ..................................................  Raphanus sativus var. oleiformis
FD539634       --> GACGGACAATGCGCGATCCCGATGGTGTGTCCACCAGAAAGTGCTACTAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530140       --> GACGGACAATGCGCGATCCCGATGGTGTGTCCACCAGAAAGTGCTACTAA  Raphanus raphanistrum subsp. maritimus
FD552950       --> GACGGACAATGCGCGATCCCGATGGTGTGTCCACCAGAAAGTGCTACTAA  Raphanus raphanistrum subsp. landra
FD555936       --> GACGGACAATGCGCGATCCCGATGGTGTGTCCACCAGAAAGTGCTACTAA  Raphanus raphanistrum subsp. landra
FD985464       --> GACGGACAATGCGCGATCCCGATGGTGTGTCCACCAGAAAGTGCTACTAA  Raphanus raphanistrum subsp. landra
FY446116       --> GATGGACAATGCGCGATCCCGATGGTGTGTCCACCGGAGAGTGCAACTAA  Raphanus sativus cv GSK3-1
FY430595       --> GATGGACAATGCGCGATCCCGATGGTGTGTCCACCGGAGAGTGCAACTAA  Raphanus sativus cv GSK3-1
EW719387       --> GATGGACAATGCGCGATCCCGATGGTGTGTCCACCGGAGAGTGCAACTAA  Raphanus sativus var. oleiformis
EX752117       --> GATGGACAATGCGCGATCCCGATGGTGTGTCCACCGGAGAGTGCAACTAA  Raphanus raphanistrum subsp. maritimus
EX891883       --> GATGGACAATGCGCGATCCCGATGGTGTGTCCACCGGAGAGTGCAACTAA  Raphanus sativus var. oleiformis
EY894856       --> GACGGACAATGCGCGATCCCGATGGTGTGTCCACCAGAAAGTGCTACTAA  Raphanus raphanistrum subsp. maritimus
EX760104       --> GACGGACAATGCCCGATCCCGATGGTGTGTCCACCataaag.........  Raphanus raphanistrum subsp. raphanistrum (MS)

               701    -    751
UN10500        --> GTCGGTGATGTTGAGGTTTCTGTTGGCAAAGTCGGCGATGAGCTGGTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX889548       <-- GTCGGTGATGTTGAGGTTTCTGTTGGCAAAGTCGGCGATGAGCTGGTCTG  Raphanus sativus var. oleiformis
FD534127       <-- GTCGGTGATGTTGAGGTTTCTATTGGCGAAGTCGGCGATGAGCTGGTCCG  Raphanus raphanistrum subsp. maritimus
FD560362       <-- GTCGGTGATGTTGAGGTTTCTATTGGCGAAGTCGGCGATGAGCTGGTCCG  Raphanus raphanistrum subsp. landra
FY449809       <-- GTCGGTGATGTTGAGGTTTCTGTTGGCAAAGTCGGCGATGAGCTGGTCTG  Raphanus sativus cv GSK3-1
EW715682       <-- GTCGGTGATGTTGAGGTTTCTGTTGGCAAAGTCGGCGATGAGCTGGTCTG  Raphanus sativus var. oleiformis
EX748068       <-- GTCGGTGATGTTGAGGTTTCTGTTGGCAAAGTCGGCGATGAGCTGGTCTG  Raphanus raphanistrum subsp. maritimus
EX887830       <-- GTCGGTGATGTTGAGGTTTCTGTTGGCAAAGTCGGCGATGAGCTGGTCTG  Raphanus sativus var. oleiformis
EY898943       <-- GTCGGTGATGTTGAGGTTTCTATTGGCGAAGTCGGCGATGAGCTGATCCG  Raphanus raphanistrum subsp. maritimus
EY930467       <-- GTCGGTGATGTTGAGGTTTCTGTTGGCAAAGTCGGCGATGAGCTGGTCTG  Raphanus sativus var. oleiformis
FD989717       <-- GTCGGTGATGTTGAGGTTTCTATTGGCGAAGTCGGCGATGAGCTGGTCCG  Raphanus raphanistrum subsp. landra
FD543902       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556694       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX756248       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY926661       --> ..................................................  Raphanus sativus var. oleiformis
FD539634       --> GTCGGTGATGTTGAGGTTTCTATTGGCga.....................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530140       --> GTCGGTGATGTTGAGGTTTCTATTGGCgaa....................  Raphanus raphanistrum subsp. maritimus
FD552950       --> GTCGGTGATGTTGAGGTTTCTATTGGCGAAGTCGGCGATGAGCTGGTCCG  Raphanus raphanistrum subsp. landra
FD555936       --> GTCGGTGATGTTGAGGTTTCTATTGGCGAAGTCGGCGATGAGCTGGTCCG  Raphanus raphanistrum subsp. landra
FD985464       --> GTCGGTGATGTTGAGGTTTCTATTGGCGAAGTCGGCGATGAGCTGGTCCG  Raphanus raphanistrum subsp. landra
FY446116       --> GTCGGTGATGTTGAGGTTTCTGTTGGCAAAGTCGGCGATGAGCTGGTCTG  Raphanus sativus cv GSK3-1
FY430595       --> GTCGGTGATGTTGAGGTTTCTGTTGGCAAAGTCGGCGACGAGCTGGTCTG  Raphanus sativus cv GSK3-1
EW719387       --> GTCGGTGATGTTGAGGTTTCTGTTGGCAAAGTCGGCGATGAGCTGGTCTG  Raphanus sativus var. oleiformis
EX752117       --> GTCGGTGATGTTGAGGTTTCTGTTGGCAAAGTCGGCGATGAGCTGGTCTG  Raphanus raphanistrum subsp. maritimus
EX891883       --> GTCGGTGATGTTGAGGTTTCTGTTGGCAAAGTCGGCGATGAGCTGGTCTG  Raphanus sativus var. oleiformis
EY894856       --> GTCGGTGATGTTGAGGTTTCTATTGGCGAAGTCGGCGATGAGCTGATCCG  Raphanus raphanistrum subsp. maritimus
EX760104       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               751    -    801
UN10500        --> CCTTGGCGAATGGTGGTGGTAAGTTGTTTAACGTCGTGTTCTGGCTCGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX889548       <-- CCTTGGCGAATGGTGGTGGTAAGTTGTTTAACGTCGTGTTCTGGCTCGCG  Raphanus sativus var. oleiformis
FD534127       <-- CCTTGGCGAAAGGTGGTGGTAAGTTGTTTAACGTCGTGTTCTGGCTCGCG  Raphanus raphanistrum subsp. maritimus
FD560362       <-- CCTTGGCGAAAGGTGGTGGTAAGTTGTTTAACGTCGTGTACTGGCTCGCG  Raphanus raphanistrum subsp. landra
FY449809       <-- CCTTGGCGAATGGTGGTGGTAAGTTGTTTAACGTCGTGTTCTGGCTCGCG  Raphanus sativus cv GSK3-1
EW715682       <-- CCTTGGCGAATTGTGGTG-T-AGTTGTTTAACGTCGTGTTCTGGCTCGCG  Raphanus sativus var. oleiformis
EX748068       <-- CCTTGGCGAATGGTGGTGGTAAGTTGTTTAACGTCGTGTTCTGGCTCGCG  Raphanus raphanistrum subsp. maritimus
EX887830       <-- CCTTGGCGAATGGTGGTGGTAAGTTGTTTAACGTCGTGTTCTGGCTCGCG  Raphanus sativus var. oleiformis
EY898943       <-- CCTTGGCGAAAGGTGGTGGTAAGTTGTTTAACGTCGTGTTCTGGCTCGCG  Raphanus raphanistrum subsp. maritimus
EY930467       <-- CCTTGGCGAATGGTGGTGGTAAGTTGTTTAACGTCGTGTTCTGGCTCGCG  Raphanus sativus var. oleiformis
FD989717       <-- CTTTGGCGAAAGGTGGTGGTAAGTTGTTTAACGTCGTGTTCTGGCTCGCG  Raphanus raphanistrum subsp. landra
FD543902       <-- .....GCGAAAGGTGGTGGTAAGTTGTTTAAAGTCGTGTTCTGGCTCGCG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556694       <-- .......GAAAGGTGGTGGTAAGTTGTTTAACGTCGTGTTCTGGCTCGCG  Raphanus raphanistrum subsp. landra
EX756248       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY926661       --> ..................................................  Raphanus sativus var. oleiformis
FD539634       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530140       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD552950       --> CCTTGGCGAAAGGTGGTGGTAAGTTGTTTAACGTCGTGTTCTGGCTCGCG  Raphanus raphanistrum subsp. landra
FD555936       --> CCTTGGC...........................................  Raphanus raphanistrum subsp. landra
FD985464       --> CCTTGGCGAAAGGTGGTGGTAAGTTGTTTAACGTCGTGTTCTGGCTCGCG  Raphanus raphanistrum subsp. landra
FY446116       --> CCTTGGCGAATGGTGGTGGTAAGTTGTTTAACGTCGTGTTCTGGCTCGCG  Raphanus sativus cv GSK3-1
FY430595       --> CCTTGGCGAATGGTGGTGGTAAGTTGTTTAACGTCGTGTTCTGGCTCGCG  Raphanus sativus cv GSK3-1
EW719387       --> CCTTGGCGAATTGTGGTG-T-AGTTGTTTAACGTCGTGTTCTGGCTCGCG  Raphanus sativus var. oleiformis
EX752117       --> CCTTGGCGAATGGTGGTGGTAAGTTGTTTAACGTCGTGTTCTGGCTCGCG  Raphanus raphanistrum subsp. maritimus
EX891883       --> CCTTGGCGAATGGTGGTGGTAAGTTGTTTAACGTCGTGTTCTGGCTCGCG  Raphanus sativus var. oleiformis
EY894856       --> CCTTGGCGAAAGGTGGTGGTAAGTTGTTTAACGTCGTGTTCTGGCTCGCG  Raphanus raphanistrum subsp. maritimus
EX760104       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               801    -    851
UN10500        --> AACGCTAGTGAGTCACGTCGGCCAAGTGGTACAGCATAGTCTGGCCCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX889548       <-- AACGCTAGTGAGTCACGTCGGCCAAGTGGTACAGCATAGTCTGGCCCTCC  Raphanus sativus var. oleiformis
FD534127       <-- AATGCTAGTGAGTCACGTCGGCCAAGTGGTACAGCATAGTCTGGCCCTCC  Raphanus raphanistrum subsp. maritimus
FD560362       <-- AATGCTAGTGAGTCACGTCGGCCAAGTGGTACAGCATAGTCTGGCCCTCC  Raphanus raphanistrum subsp. landra
FY449809       <-- AACGCTAGTGAGTCACGTCGGCCAAGTGGTACAGCATAGTCTGGCCCTCC  Raphanus sativus cv GSK3-1
EW715682       <-- AACGCTAGTGAGTCACGTCGGCCAAGTGGTACAGCATAGTCTGGCCCTCC  Raphanus sativus var. oleiformis
EX748068       <-- AACGCTAGTGAGTCACGTCGGCCAAGTGGTACAGCATAGTCTGGCCCTCC  Raphanus raphanistrum subsp. maritimus
EX887830       <-- AACGCTAGTGAGTCACGTCGGCCAAGTGGTACAGCATAGTCTGGCCCTCC  Raphanus sativus var. oleiformis
EY898943       <-- AATGCTAGTGAGTCACGTCGGCCAAGTGGTACAGCATAGTCTGGCCCTCC  Raphanus raphanistrum subsp. maritimus
EY930467       <-- AACGCTAGTGAGTCACGTCGGCCAAGTGGTACAGCATAGTCTGGCCCTCC  Raphanus sativus var. oleiformis
FD989717       <-- AATGCTAGTGAGTCACGTCGGCCAAGTGGTACAGCATAGTCTGGCCCTCC  Raphanus raphanistrum subsp. landra
FD543902       <-- AATGCTAGTGAGTCACGTCGGCCAAGTGGCACAGCATAGTCTGGCCCTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556694       <-- AATGCTAGTGAGTCACGTCGGCCAAGTGGTACAGCATAGTCTGGCCCTCC  Raphanus raphanistrum subsp. landra
EX756248       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY926661       --> ..................................................  Raphanus sativus var. oleiformis
FD539634       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530140       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD552950       --> AATGCTAGTGAGTCACGTCGGCCA..........................  Raphanus raphanistrum subsp. landra
FD555936       --> ..................................................  Raphanus raphanistrum subsp. landra
FD985464       --> AATGCTAGTGAGTCACGTCGGCCAAGTGGTACAGCATAGTCTGGCCCTCC  Raphanus raphanistrum subsp. landra
FY446116       --> AACGCTAGTGAGTCACGTCGGCCAAGTGGTACAGCATAGTCTGGCCCTCC  Raphanus sativus cv GSK3-1
FY430595       --> AACGCTAGTGAGTCACGTCGGCCAAGTGGTACAGCATAGTCTGGCCCTCC  Raphanus sativus cv GSK3-1
EW719387       --> AACGCTAGTGAGTCACGTCGGCCAAGTGGTACAGCATAGTCTGGCCCTCC  Raphanus sativus var. oleiformis
EX752117       --> AACGCTAGTGAGTCACGTCGGCCAAGTGGTACAGCATAGTCTGGCCCTCC  Raphanus raphanistrum subsp. maritimus
EX891883       --> AACGCTAGTGAGTCACGTCGGCCAAGTGGTACAGCATAGTCTGGCCCTCC  Raphanus sativus var. oleiformis
EY894856       --> AA................................................  Raphanus raphanistrum subsp. maritimus
EX760104       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               851    -    901
UN10500        --> TGATAGGACGACGGAGTCACGGGCGGCTAGAGCGAGGATGTCAGAACAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX889548       <-- TGATAGGACGACGGAGTCACGGGCGGCTc.....................
FD534127       <-- TGATAGGACGACGGAGTCACGGGCGGCTAGAGCGAGGATGTCAGAACAAG
FD560362       <-- TGATAGGACGACGGAGTCACGGGCGGCTAGAGCGAGGATGTCAGAACAAG
FY449809       <-- TGATAGGACGACGGAGTCACGGGCGGCTAGAGCGAGGATGTCAGAACAAG
EW715682       <-- TGATAGGACGACGGAGTCACGGGCGGCTAGAGCGAGGATGTCAGAACAAG
EX748068       <-- TGATAGGACGACGGAGTCACGGGCGGCTAGAGCGAGGATGTCAGAACAAG
EX887830       <-- TGATAGGACGACGGAGTCACGGGCGGCTAGAGCGAGGATGTCAGAACAAG
EY898943       <-- TGATAGGACGACGGAGTCACGGGCGGCTAGAGCGAGGATGTCAGAACAAG
EY930467       <-- TGATAGGACGACGGAGTCACGGGCGGCTAGAGCGAGGATGTCAGAACAAG
FD989717       <-- TGATAGGACGACGGAGTCACGGGCGGCTAGAGCGAGGATGTCAGAACAAG
FD543902       <-- TGATAGGACGACGGAGTCACGGGCGGCTAGAGCGAGGATGTCAGAACAAG
FD556694       <-- TGATAGGACGACGGAGTCACGGGCGGCTAGAGCGAGGATGTCAGAACAAG
EX756248       <-- ..................................................
EY926661       --> ..................................................
FD539634       --> ..................................................
FD530140       --> ..................................................
FD552950       --> ..................................................
FD555936       --> ..................................................
FD985464       --> TGATAGGACGACGGAGTCACGGGCGGCTAGAGCGAGGATGTCAGAACAAG
FY446116       --> TGATAGGACGACGGAGTCACGGGCGGCTAGAGCGAGGATGTCAGAACAAG
FY430595       --> TGATAGGACGACGGAGTCACGGGCGGCTAGAGCGAGGATGTCAGAACAAG
EW719387       --> TGATAGGACGACGGAGTCACGGGCGGCTAGAGCGAGGATGTCAGAACAAG
EX752117       --> TGATAGGACGACGGAGTCACGGGCGGCTAGAGCGAGGATGTCAGA-CAAG
EX891883       --> TGA...............................................
EY894856       --> ..................................................
EX760104       --> ..................................................

               901    -    951
UN10500        --> AGACGACTTGACCACATTGCTTGTGGACAAGGGCACGAAGGTTATTGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX889548       <-- ..................................................
FD534127       <-- AGACGACTTGACCACATTGCTTGTGGACAAGGGCACGAAGGTTATTGATG
FD560362       <-- AGACGACTTGACCACATTGCTTGTGGACAAGGGCACGAAGGTTATTGATG
FY449809       <-- AGACGACTTGACCACATTGCTTGTGGACAAGGGCACGAAGGTTATTGATG
EW715682       <-- AGACGACTTGACCACATTGCTTGTGGACAAGGGCACGGAGGTTATTGATG
EX748068       <-- AGACGACTTGACCACATTGCTTGTGGACAAGGGCACGAAGGTTATTGATG
EX887830       <-- AGACGACTTGACCACATTGCTTGTGGACAAGGGCACGAAGGTTATTGATG
EY898943       <-- AGACGACTTGACCACATTGCTTGTGGACAAGGGCACGAAGGTTATTGATG
EY930467       <-- AGACGACTTGACCACATTGCTTGTGGACAAGGGCACGAAGGTTATTGATG
FD989717       <-- AGACGACTTGACCACATTGCTTGTGGACAAGGGCACGAAGGTTATTGATG
FD543902       <-- AGACGACTTGACCACATTGCTTGTGGACAAGGGCACGAAGGTTATTGATG
FD556694       <-- AGACGACTTGACCACATTGCTTGTGGACAAGGGCACGAAGGTTATTGATG
EX756248       <-- ..................................................
EY926661       --> ..................................................
FD539634       --> ..................................................
FD530140       --> ..................................................
FD552950       --> ..................................................
FD555936       --> ..................................................
FD985464       --> AGACGACTTGACCACATTGCTTGTGGA.......................
FY446116       --> AGACGACTTGACCACATTGCTT............................
FY430595       --> AGACGACTTGACCACATTGCTTGTGGACAAGGGCACGAAGGTTATTGATG
EW719387       --> AGACGACTTGACCACATTGCTTGTGGACAAGGGCACGGAGGTT.......
EX752117       --> AGACGACTTGAC-ACATTGCTTGTGGACA-GGGCACG.............
EX891883       --> ..................................................
EY894856       --> ..................................................
EX760104       --> ..................................................

               951    -   1001
UN10500        --> ACGACAAAGGCGGCTTGACGGAGTGTCAGATTCGGGATCGATGATTGCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX889548       <-- ..................................................
FD534127       <-- ACGACAAAGGCGGCTTGACGGAGTGTCAGATTCGGGATCGATGATTGCTC
FD560362       <-- ACGACAAAGGCGGCTTGACGGAGTGTCAGATTCGGGATCGATGATTGCTC
FY449809       <-- ACGACAAAGGCGGCTTGACGGAGTGTCAGATTCGGGATCGATGATTGCTC
EW715682       <-- ACGACAAAGGCGGCTTGACGGAGTGTCAGATTCGGGATCGATGATTGCTC
EX748068       <-- ACGACAAAGGCGGCTTGACGGAGTGTCAGATTCGGGATCGATGATTGCTC
EX887830       <-- ACGACAAAGGCGGCTTGACGGAGTGTCAGATTCGGGATCGATGATTGCTC
EY898943       <-- ACGACAAAGGCGGCTTGACGGAGTGTCAGATTCGGGATCGATGATTGCTC
EY930467       <-- ACGACAAAGGCGGCTTGACGGAGTGTCAGATTCGGGATCGATGATTGCTC
FD989717       <-- ACGACAAAGGCGGCTTGACGGAGTGTCAGATTCGGGATCGATGATTGCTC
FD543902       <-- ACGACAAAGGCGGCTTGACGGAGTGTCAGATTCGGGATCGATGATTGCTC
FD556694       <-- ACGACAAAGGCGGCTTGACGGAGTGTCAGATTCGGGATCGATGATTGCTC
EX756248       <-- ..................................................
EY926661       --> ..................................................
FD539634       --> ..................................................
FD530140       --> ..................................................
FD552950       --> ..................................................
FD555936       --> ..................................................
FD985464       --> ..................................................
FY446116       --> ..................................................
FY430595       --> ..................................................
EW719387       --> ..................................................
EX752117       --> ..................................................
EX891883       --> ..................................................
EY894856       --> ..................................................
EX760104       --> ..................................................

               1001   -   1051
UN10500        --> TCCTGGTCCACTCGCTGATCCATCTAGCAGCACGGATGCTTCACATCCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX889548       <-- ..................................................
FD534127       <-- TCC...............................................
FD560362       <-- TCCTGc............................................
FY449809       <-- TCCTGGTCCACTCGCTGATCCATCTAGCAGCACGGATGCTTCACATCCCT
EW715682       <-- TCCTGGTCCACTCGCTGATCCATCTAGCAGCACGGATGCTTCACATCCCT
EX748068       <-- TCCTGGTCCACTCGCTGATCCATCTAGCAGCACGGATGCTTCACATCCCT
EX887830       <-- TCCTGGTCCACTCGCTGATCCATCTAGCAGCACGGATGCTTCACATCCCT
EY898943       <-- TCCTGGTCCACTCGCTGATCCATCTAGCAGCACGGATGCTTCACATCCCC
EY930467       <-- TCCTGGTCCACTCGCTGATCCATCTAGCAGCACGGATGCTTCACATCCCT
FD989717       <-- TCCTGGTCCACTCGCTGATCCATCTAGCAGCACGGATGCTTCACATCCCT
FD543902       <-- TCCTGGTCCACTCGCTGATCCATCTAGCAGCACGGATGCTTCACATCCCT
FD556694       <-- TCCTGGTCCACTCGCTGATCCATCTAGCAGCACGGATGCTTCACATCCCT
EX756248       <-- ..................................................
EY926661       --> ..................................................
FD539634       --> ..................................................
FD530140       --> ..................................................
FD552950       --> ..................................................
FD555936       --> ..................................................
FD985464       --> ..................................................
FY446116       --> ..................................................
FY430595       --> ..................................................
EW719387       --> ..................................................
EX752117       --> ..................................................
EX891883       --> ..................................................
EY894856       --> ..................................................
EX760104       --> ..................................................

               1051   -   1101
UN10500        --> GAACGAAGCAGTCATGGAAATGTATACGAAGGATGGCTGCGGCTAAACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX889548       <-- ..................................................
FD534127       <-- ..................................................
FD560362       <-- ..................................................
FY449809       <-- GAACGAAGCAGTCATGGAAATGTATACGAAGGATGGCTGCGGCTAAACCA
EW715682       <-- GAACGAAGCAGTCATGGAAATGTATACGAAGGATGGCTGCGGCTAAACCA
EX748068       <-- GAACGAAGCAGTCATGGAAATGTATACGAAGGATGGCTGCGGCTAAACCA
EX887830       <-- GAACGAAGCAGTCATGGAAATGTATACGAAGGATGGCTGCGGCTAAACCG
EY898943       <-- GAACGAAGCAGTCATGGAAATGTATACGAAGGATGGCTGCGGCTAAACCA
EY930467       <-- GAACGAAGCAGTCATGGAAATGTATACGAAGGATGGCTGCGGCTAAACCA
FD989717       <-- GAACGAAGCAGTCATGGAAATGTATACGAAGGATGGCTGCGGCTAAACCA
FD543902       <-- GAACGAAGCAGTCATGGAAATGTATACGAAGGATGGCTGCGGCTAAACCA
FD556694       <-- GAACGAAGCAGTCATGGAAATGTATACGAAGGATGGCTGCGGCTAAACCA
EX756248       <-- ..................................................
EY926661       --> ..................................................
FD539634       --> ..................................................
FD530140       --> ..................................................
FD552950       --> ..................................................
FD555936       --> ..................................................
FD985464       --> ..................................................
FY446116       --> ..................................................
FY430595       --> ..................................................
EW719387       --> ..................................................
EX752117       --> ..................................................
EX891883       --> ..................................................
EY894856       --> ..................................................
EX760104       --> ..................................................

               1101   -   1151
UN10500        --> ATATCTCTCTTGAAGATTTTCTTGAGCTCTTTCCTGATGATGCTTTCCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX889548       <-- ..................................................  Raphanus sativus var. oleiformis
FD534127       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD560362       <-- ..................................................  Raphanus raphanistrum subsp. landra
FY449809       <-- ATATCTCTCTTGAAGACTTTCTTGAGCTCTTTCCTGATGATGCTTTCCAC  Raphanus sativus cv GSK3-1
EW715682       <-- ATACCTCTCTTGAAGACTTTCTTGAGCTCTTTCCTGATGATGCTTTCCAC  Raphanus sativus var. oleiformis
EX748068       <-- ATATCTCTCTTGAAGACTTTCTTGAGCTCTTTCCTGATGATGCTTTCCAC  Raphanus raphanistrum subsp. maritimus
EX887830       <-- ATATCTCTCTTGAAGACTTTCTTGAGCTCTTTCCTGATGATGCTTTCCAC  Raphanus sativus var. oleiformis
EY898943       <-- ATATCTCTCTTGAAGATTTTCTTGAGCTCTTTCCTGATGATGCTTTCCAC  Raphanus raphanistrum subsp. maritimus
EY930467       <-- ATATCTCTCTTGAAGACTTTCTTGAGCTCTTTCCTGATGATGCTTTCCAC  Raphanus sativus var. oleiformis
FD989717       <-- ATATCTCTCTTGAAGATTTTCTTGAGCTCTTTCCTGATGATGCTTTCCAC  Raphanus raphanistrum subsp. landra
FD543902       <-- ATATCTCTCTTGAAGATTTTCTTGAGCTCTTTCCTGATGATGCTTTCCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556694       <-- ATATCTCTCTTGAAGATTTTCTTGAGCTCTTTCCTGATGATGCTTTCCAC  Raphanus raphanistrum subsp. landra
EX756248       <-- ............AAGATTTTCTTGAGCTCTTTCCTGATGATGCTTTCCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY926661       --> ..................................................  Raphanus sativus var. oleiformis
FD539634       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530140       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD552950       --> ..................................................  Raphanus raphanistrum subsp. landra
FD555936       --> ..................................................  Raphanus raphanistrum subsp. landra
FD985464       --> ..................................................  Raphanus raphanistrum subsp. landra
FY446116       --> ..................................................  Raphanus sativus cv GSK3-1
FY430595       --> ..................................................  Raphanus sativus cv GSK3-1
EW719387       --> ..................................................  Raphanus sativus var. oleiformis
EX752117       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX891883       --> ..................................................  Raphanus sativus var. oleiformis
EY894856       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX760104       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               1151   -   1201
UN10500        --> TTTTGGACATGCTTTCTGGTAAAAGCTCCATGAGAGACCTTTCACTAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX889548       <-- ..................................................
FD534127       <-- ..................................................
FD560362       <-- ..................................................
FY449809       <-- TTTTGGACATGCTTTCTGGTAAAAGCTCCATGAGAGACCTTTCACTAGAG
EW715682       <-- TTTTGGACATGCTTTCTGGTAAAAGCTCCATGAGAGACCTTTCACTAGAG
EX748068       <-- TTTTGGACATGCTTTCTGGTAAAAGCTCCATGAGAGACCTTTCACTAGAG
EX887830       <-- TTTTGGACATGCTTTCTGGTAAAAGCTCCATGAGAGACCTTTCACTAGAG
EY898943       <-- TTTTGGACATGCTTTCTGGTAAAAACTCCATGAGAGACCTTTCACTAGAG
EY930467       <-- TTTTGGACATGCTTTCTGGTAAAAGCTCCATGAGAGACCTTTCACTAGAG
FD989717       <-- TTTTGGACATGCTTTCTGGTAAAAGCTCCATGAGAGACCTTTCACTAGAG
FD543902       <-- TTTTGGACATGCTTTCTGGTAAAAGCTCCATGAGAGACCTTTCACTAGAG
FD556694       <-- TTTTGGACATGCTTTCTGGTAAAAGCTCCATGAGAGACCTTTCACTAGAG
EX756248       <-- TTTTGGACATGCTTTCTGGTAAAAGCTCCATGAGAGACCTTTCACTAGAG
EY926661       --> ..................................................
FD539634       --> ..................................................
FD530140       --> ..................................................
FD552950       --> ..................................................
FD555936       --> ..................................................
FD985464       --> ..................................................
FY446116       --> ..................................................
FY430595       --> ..................................................
EW719387       --> ..................................................
EX752117       --> ..................................................
EX891883       --> ..................................................
EY894856       --> ..................................................
EX760104       --> ..................................................

               1201   -   1251
UN10500        --> GAACATCTCTCCTCGGCTTCTTCTTATCCTGTGCCTCTACCGTGGACAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX889548       <-- ..................................................
FD534127       <-- ..................................................
FD560362       <-- ..................................................
FY449809       <-- GAACATCTCTCCTCGGCTTCTTCTTATCCTGTGCCTCTACCGTGGACAGA
EW715682       <-- GAACATCTCTCCTCGGCTTCTTCTTATCCTGTGCCTCTACCGTGGACAGA
EX748068       <-- GAACATCTCTCCTCGGCTTCTTCTTATCCTGTGCCTCTACCGTGGACAGA
EX887830       <-- GAACATCTCTCCTCGGCTTCTTCTTATCCTGTGCCTCTACCGTGGACAGA
EY898943       <-- GAACATCTCTCCTCGGCTTCTTCTTATCCTGTGCCTCTACCGTGGACAGA
EY930467       <-- GAACATCTCTCCTCGGCTTCTTCTTATCCTGTGCCTCTACCGTGGACAGA
FD989717       <-- GAACATCTCTCCTCGGCTTCTTCTTATCCTGTGCCTCTACCGTGGACAGA
FD543902       <-- GAACATCTCTCCTCGGCTTCTTCTTATCCTGTGCCTCTACCGTGGACAGA
FD556694       <-- GAACATCTCTCCTCGGCTTCTTCTTATCCTGTGCCTCTACCGTGGACAGA
EX756248       <-- GAACATCTCTCCTCGGCTTCTTCTTATCCTGTGCCTCTACCGTGGACAGA
EY926661       --> ..................................................
FD539634       --> ..................................................
FD530140       --> ..................................................
FD552950       --> ..................................................
FD555936       --> ..................................................
FD985464       --> ..................................................
FY446116       --> ..................................................
FY430595       --> ..................................................
EW719387       --> ..................................................
EX752117       --> ..................................................
EX891883       --> ..................................................
EY894856       --> ..................................................
EX760104       --> ..................................................

               1251   -   1301
UN10500        --> AGGTTCATTGCCACCGCCACTAACGAGATCAATATCAGAAAAGTGAGGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX889548       <-- ..................................................
FD534127       <-- ..................................................
FD560362       <-- ..................................................
FY449809       <-- AGGTTCATTGCCACCGCCACTAACGAGATCAATATCAGAAAAGTGAGGAC
EW715682       <-- AGGTTCATTGCCACCGCCACTAACGAGATCAATATCAGAAAAGTGAGGAC
EX748068       <-- AGGTTCATTGCCACCGCCACTAACGAGATCAATATCAGAAAAGTGAGGAC
EX887830       <-- AGGTTCATTGCCACCGCCACTAACGAGATCAATATCAGAAAAGTGAGGAC
EY898943       <-- AGGTTCATTGCCACCGCCACTAACGAGATCAATATCAGAAAAGTGAGGAC
EY930467       <-- AGGTTCATTGCCACCGCCACTAACGAGATCAATATCAGAAAAGTGAGGAC
FD989717       <-- AGGTTCATTGCCACCGCCACTAACGAGATCAATATCAGAAAAGTGAGGAC
FD543902       <-- AGGTTCATTGCCACCGCCACTAACGAGATCAATATCAGAAAAGTGAGGAC
FD556694       <-- AGGTTCATTGCCACCGCCACTAACGAGATCAATATCAGAAAAGTGAGGAC
EX756248       <-- AGGTTCATTGCCACCGCCACTAAC..........................
EY926661       --> ..................................................
FD539634       --> ..................................................
FD530140       --> ..................................................
FD552950       --> ..................................................
FD555936       --> ..................................................
FD985464       --> ..................................................
FY446116       --> ..................................................
FY430595       --> ..................................................
EW719387       --> ..................................................
EX752117       --> ..................................................
EX891883       --> ..................................................
EY894856       --> ..................................................
EX760104       --> ..................................................

               1301   -   1351
UN10500        --> ACGTTTGGATAAACCCTCACCCATTTTCCTCTCTTGTTGGTGTTTTGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX889548       <-- ..................................................
FD534127       <-- ..................................................
FD560362       <-- ..................................................
FY449809       <-- ACGTTTGGATAAACCCTCACCCATTT-CCTCTC.................
EW715682       <-- ACGTTTGGATAAACCCTCACCCATTTTCCTCTCTTGTTGGTGTTTTGTTT
EX748068       <-- ACGTTTGGATAAACCCTCACCCATTTTCCTCTCTTGTTGGTGTTTTGTTT
EX887830       <-- ACGTTTGGATAAACCCTCACCCATTTTCCTCTCTTGTTGGTGTTTTGTTT
EY898943       <-- ACGTTTGGATAAACCCTCACCCATTTTCCTCTCTTGTTGGTGTTTTGTTT
EY930467       <-- ACGTTTGGATAAACCCTCACCCATTTTCCTCTCTTGTTGGTGTTTTGTTT
FD989717       <-- ACGTTTGGATAAACCCTCACCCATTTTCCTCTCTTGTTGGTGTTTTGTTT
FD543902       <-- ACGTTTGGATAAACCCTCACCCATTTTCCTCTCTTGTTGGTGTTTTGTTT
FD556694       <-- ACGTTTGGATAAACCCTCACCCATTTTCCTCTCTTGTTGGTGTCTTGTTT
EX756248       <-- ..................................................
EY926661       --> ..................................................
FD539634       --> ..................................................
FD530140       --> ..................................................
FD552950       --> ..................................................
FD555936       --> ..................................................
FD985464       --> ..................................................
FY446116       --> ..................................................
FY430595       --> ..................................................
EW719387       --> ..................................................
EX752117       --> ..................................................
EX891883       --> ..................................................
EY894856       --> ..................................................
EX760104       --> ..................................................

               1351   -   1401
UN10500        --> TAAAAGTTTTTCTCTTCTCTGCCTATTGCTG...
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX889548       <-- ..................................  Raphanus sativus var. oleiformis
FD534127       <-- ..................................  Raphanus raphanistrum subsp. maritimus
FD560362       <-- ..................................  Raphanus raphanistrum subsp. landra
FY449809       <-- ..................................  Raphanus sativus cv GSK3-1
EW715682       <-- TAAAAGTTTTTCTCTTCTCTGCCT-TTGCTcc..  Raphanus sativus var. oleiformis
EX748068       <-- TAAAAGTTTTTCTCTTCTCTGCCT-TTGCTcc..  Raphanus raphanistrum subsp. maritimus
EX887830       <-- TAAAAGTTTTTCTCTTCTCTGCCT-TTGCTGccc  Raphanus sativus var. oleiformis
EY898943       <-- TAAAAGTTTTTCTCTTCTCTGCCTATTGCTcc..  Raphanus raphanistrum subsp. maritimus
EY930467       <-- TAAAAGTTTTTCTC....................  Raphanus sativus var. oleiformis
FD989717       <-- TAAAAGTTTTTCTCTTCTCTGCCTATTGCTGtcc  Raphanus raphanistrum subsp. landra
FD543902       <-- TAAAAGTTTTTCTCTTCTCTGCCTATTGCTGtcc  Raphanus raphanistrum subsp. raphanistrum (MS)
FD556694       <-- TAAAAGTTTTTCTCTTCTCTGCCTATTGCcc...  Raphanus raphanistrum subsp. landra
EX756248       <-- ..................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY926661       --> ..................................  Raphanus sativus var. oleiformis
FD539634       --> ..................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD530140       --> ..................................  Raphanus raphanistrum subsp. maritimus
FD552950       --> ..................................  Raphanus raphanistrum subsp. landra
FD555936       --> ..................................  Raphanus raphanistrum subsp. landra
FD985464       --> ..................................  Raphanus raphanistrum subsp. landra
FY446116       --> ..................................  Raphanus sativus cv GSK3-1
FY430595       --> ..................................  Raphanus sativus cv GSK3-1
EW719387       --> ..................................  Raphanus sativus var. oleiformis
EX752117       --> ..................................  Raphanus raphanistrum subsp. maritimus
EX891883       --> ..................................  Raphanus sativus var. oleiformis
EY894856       --> ..................................  Raphanus raphanistrum subsp. maritimus
EX760104       --> ..................................  Raphanus raphanistrum subsp. raphanistrum (MS)