RadishBase

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Alignment for radish unigene UN10531

               -4     -     46
UN10531        --> .....ACGACAGAAGTGACTTCCGTCTCTTGGATAATCAATTCGCTGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753032       <-- ..................................................
FD983060       <-- ..................................................
EX752209       <-- ..................................................
EY911890       <-- ..................................................
EV546724       <-- ..................................................
EX767322       <-- ..................................................
FD984116       <-- ..................................................
EX774236       <-- ..................................................
EY912385       <-- ..................................................
FD983103       <-- ..................................................
FD545175       <-- ..................................................
EY911765       <-- ..................................................
FD982650       <-- ..................................................
EX749302       --> ggactACGACAGAAGTGACTTCCGTCTCTTCTATAATCAATTCGCTGAGA
FD988187       --> ...ggACGACAGAAGTGACTTCCGTCTCTTCTATAATCAATTCGCTGAGA
EX763204       --> ..............ggGACTTCCGTCTCTTCTATAATCAATTCGCTGAGA
FD533350       --> ..............ggGACTTCCGTCTCTTCTATAATCAATTCGCTGAGA
EY916023       --> ..............................GGATAATCAATTCGCTGAGA
EY916165       --> ..............................GGATAATCAATTCGCTGAGA
EY916758       --> ..............................GGATAATCAATTCGCTGAGA
EY922483       --> ..............................GGATAATCAATTCGCTGAGA
FD533025       --> ..............................GGATAATCAATTCGCTGAGA
FD549083       --> ..............................GGATAATCAATTCGCTGAGA
FD986899       --> ..............................GGATAATCAATTCGCTGAGA
FD986957       --> ..............................GGATAATCAATTCGCTGAGA
EX748197       --> ............................ggatATAATCAATTCGCTGAGA
EV551667       --> ..................................................

               46     -     96
UN10531        --> GTATGGCCTCGCGTTTGTTATCAACCACACTCATCACACCACCGCCCAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753032       <-- ..................................................
FD983060       <-- ..................................................
EX752209       <-- ..................................................
EY911890       <-- ..................................................
EV546724       <-- ..................................................
EX767322       <-- ..................................................
FD984116       <-- ..................................................
EX774236       <-- ..................................................
EY912385       <-- ..................................................
FD983103       <-- ..................................................
FD545175       <-- ..................................................
EY911765       <-- ..................................................
FD982650       <-- ..................................................
EX749302       --> GTATGGCCTCGCGTTTGTTATCAACCACACTCATCACACCACCGCCCAAT
FD988187       --> GTATGGCCTCGCGTTTGTTATCAACCACACTCATCACACCACCGCCCAAT
EX763204       --> GTATGGCCTCGCGTTTGTTATCAACCACACTCATCACACCACCGCCCAAT
FD533350       --> GTATGGCCTCGCGTTTGTTATCAGCCACACTCATCACACCACCGCCCAAT
EY916023       --> GTATGGCCTCGCGTTTGTTATCAACCACACTCATCACACCACCACCCAAT
EY916165       --> GTATGGCCTCGCGTTTGTTATCAACCACACTCATCACACCACCGCCCAAT
EY916758       --> GTATGGCCTCGCGTTTGTTATCAACCACACTCATCACACCACCGCCCAAT
EY922483       --> GTATGGCCTCGCGTTTGTTATCAACCACACTCATCACACCACCGCCCAAT
FD533025       --> GTATGGCCTCGCGTTTGTTATCAACCACACTCATCACACCACCGCCCAAT
FD549083       --> GTATGGCCTCGCGTTTGTTATCAACCACACTCATCACACCACCGCCCAAT
FD986899       --> GTATGGCCTCGCGTTTGTTATCAACCACACTCATCACACCACCGCCCAAT
FD986957       --> GTATGGCCTCGCGTTTGTTATCAACCACACTCATCACACCACCGCCCAAT
EX748197       --> GTATGGCCTCGCGTTTGTTATCAACCACACTCATCACACCACCGCCCAAT
EV551667       --> ..................................................

               96     -    146
UN10531        --> CTCAACAAATCGTCGGCGAATCTAACAACTATCGTTAAGCTGAGAAAGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753032       <-- ..................................................
FD983060       <-- ..................................................
EX752209       <-- ..................................................
EY911890       <-- ..................................................
EV546724       <-- ..................................................
EX767322       <-- ..................................................
FD984116       <-- ..................................................
EX774236       <-- ..................................................
EY912385       <-- ..................................................
FD983103       <-- ..................................................
FD545175       <-- ..................................................
EY911765       <-- ..................................................
FD982650       <-- ..................................................
EX749302       --> CTCAACAAATCGTCGGCGAATCTAACAACTATCGTTAAGCTGAGAAAGGG
FD988187       --> CTCAACAAATCGTCGGCGAATCTAACAACTATCGTTAAGCTGAGAAAGGG
EX763204       --> CTCAACAAATCGTCGGCGAATCTAACAACTATCGTTAAGCTGAGAAAGGG
FD533350       --> CTCAACAAATCGTCGGCGAATCTAACAACTATCGTTAAGCTGAGAAAGGG
EY916023       --> CTCAACAAATCGTCGGCGAATCTAACAACTATCGTTAAGCTGAGAAAGGG
EY916165       --> CTCAACAAATCGTCGGCGAATCTAACAACTATCGTTAAGCTGAGAAAGGG
EY916758       --> CTTAACAAATCGTCGGCGAATCTAACAACTATCGTTAAGCTGAGAAAGGG
EY922483       --> CTCAACAAATCGTCGGCGAATCTAACAACTATCGTTAAGCTGAGAAAGGG
FD533025       --> CTCAACAAATCGTCGGCGAATCTAACAACTATCGTTAAGCTGAGAAAGGG
FD549083       --> CTCAACAAATCGTCGGCGAATCTAACAACTATCGTTAAGCTGAGAAAGGG
FD986899       --> CTCAACAAATCGTCGGCGAATCTAACAACTATCGTTAAGCTGAGAAAGGG
FD986957       --> CTCAACAAATCGTCGGCGAATCTAACAACTATCGTTAAGCTGAGAAAGGG
EX748197       --> CTCAACAAATCGTCGGCGAATCTAACAACTATCGTTAAGCTGAGAAAGGG
EV551667       --> ..................................................

               146    -    196
UN10531        --> AAGGCTTAGTATCAGGGCAGTGAGCAACAGCTCTCAAGGAGGAACCGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753032       <-- ..................................................
FD983060       <-- ..................................................
EX752209       <-- ..................................................
EY911890       <-- ..................................................
EV546724       <-- ..................................................
EX767322       <-- ..................................................
FD984116       <-- ..................................................
EX774236       <-- ..................................................
EY912385       <-- ..................................................
FD983103       <-- ..................................................
FD545175       <-- ..................................................
EY911765       <-- ..................................................
FD982650       <-- ..................................................
EX749302       --> AAGGCTTAGTATCAGGGCAGTGAGCAACAGCTCTCAAGGAGGAACCGTTT
FD988187       --> AAGGCTTAGTATCAGGGCAGTGAGCAACAGCTCTCAAGGAGGAACCGTTT
EX763204       --> AAGGCTTAGTATCAGGGCAGTGAGCAACAGCTCTCAAGGAGGAACCGTTT
FD533350       --> AAGGCTTAGTATCAGGGCAGTGAGCAACAGCTCTCAAGGAGGAACCGTTT
EY916023       --> AAGGCTTAGTATCAGGGCAGTGAGCAACAGCTCTCAAGGAGGAACCGTTT
EY916165       --> AAGGCTTAGTATCAGGGCAGTGAGCAACAGCTCTCAAGGAGGAACCGTTT
EY916758       --> AAGGCTTAGTATCAGGGCAGTGAGCAACAGCTCTCAAGGAGGAACCGTTT
EY922483       --> AAGGCTTAGTATCAGGGCAGTGAGCAACAGCTCTCAAGGAGGAACCGTTT
FD533025       --> AAGGCTTAGTATCAGGGCAGTGAGCAACAGCTCTCAAGGAGGAACCGTTT
FD549083       --> AAGGCTTAGTATCAGGGCAGTGAGCAACAGCTCTCAAGGAGGAACCGTTT
FD986899       --> AAGGCTTAGTATCAGGGCAGTGAGCAACAGCTCTCAAGGAGGAACCGTTT
FD986957       --> AAGGCTTAGTATCAGGGCAGTGAGCAACAGCTCTCAAGGAGGAACCGTTT
EX748197       --> AAGGCTTAGTATCAGGGCAGTGAGCAACAGCTCTCAAGGAGGAACCGTTT
EV551667       --> ..................................................

               196    -    246
UN10531        --> ACAAAGGCGTTTACGGTCCCTGGACCGTCGAACAGTCCGATGTCAAAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753032       <-- ..................................................
FD983060       <-- ..................................................
EX752209       <-- ..................................................
EY911890       <-- ..................................................
EV546724       <-- ..................................................
EX767322       <-- ..................................................
FD984116       <-- ..................................................
EX774236       <-- ..................................................
EY912385       <-- ..................................................
FD983103       <-- ..................................................
FD545175       <-- ..................................................
EY911765       <-- ..................................................
FD982650       <-- ..................................................
EX749302       --> ACAAAGGCGTTTACGGTCCCTGGACCGTCGAACAGTCCGATGTCAAAGAG
FD988187       --> ACAAAGGCGTTTACGGTCCCTGGACCGTCGAACAGTCCGATGTCAAAGAG
EX763204       --> ACAAAGGCGTTTACGGTCCCTGGACCGTCGAACAGTCCGATGTCAAAGAG
FD533350       --> ACAAAGGCGTTTACGGTCCCTGGACCGTCGAACAGTCCGATGTCAAAGAG
EY916023       --> ACAAAGGCGTTTACGGTCCCTGGACCGTCGAACAGTCCGATGTCAAAGAG
EY916165       --> ACAAAGGCGTTTACGGTCCCTGGACCGTCGAACAGTCCGATGTCAAAGAG
EY916758       --> ACAAAGGCGTTTACGGTCCCTGGACCGTCGAACAGTCCGATGTCAAAGAG
EY922483       --> ACAAAGGCGTTTACGGTCCCTGGACCGTCGAACAGTCCGATGTCAAAGAG
FD533025       --> ACAAAGGCGTTTACGGTCCCTGGACCGTCGAACAGTCCGATGTCAAAGAG
FD549083       --> ACAAAGGCGTTTACGGTCCCTGGACCGTCGAACAGTCCGATGTCAAAGAG
FD986899       --> ACAAAGGCGTTTACGGTCCCTGGACCGTCGAACAGTCCGATGTCAAAGAG
FD986957       --> ACAAAGGCGTTTACGGTCCCTGGACCGTCGAACAGTCCGATGTCAAAGAG
EX748197       --> ACAAAGGCGTTTACGGTCCCTGGACCGTCGAACAGTCCGATGTCAAAGAG
EV551667       --> ....................................ggGATGTCAAAGAG

               246    -    296
UN10531        --> GTTGTTCTGTACAGATCAGGACTTGTAACTGCTGCTGCTTCCTTTGTTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753032       <-- ..................................................
FD983060       <-- ..................................................
EX752209       <-- ..................................................
EY911890       <-- ..................................................
EV546724       <-- ..................................................
EX767322       <-- ..................................................
FD984116       <-- ..................................................
EX774236       <-- ..................................................
EY912385       <-- ..................................................
FD983103       <-- ..................................................
FD545175       <-- ..................................................
EY911765       <-- ..................................................
FD982650       <-- ..................................................
EX749302       --> GTTGTTCTGTACAGATCAGGACTTGTAACTGCTGCTGCTTCCTTTGTTAC
FD988187       --> GTTGTTCTGTACAGATCAGGACTTGTAACTGCTGCTGCTTCCTTTGTTAC
EX763204       --> GTTGTTCTGTACAGATCAGGACTTGTAACTGCTGCTGCGTCCTTTGTTAC
FD533350       --> GTTGTTCTGTACAGATCAGGACTTGTAACTGCTGCTGCTTCCTTTGTTAC
EY916023       --> GTTGTTCTGTACAGATCAGGACTTGTAACTGCTGCTGCTTCCTTTGTTAC
EY916165       --> GTTGTTCTGTACAGATCAGGACTTGTAACTGCTGCTGCTTCCTTTGTTAC
EY916758       --> GTTGTTCTGTACAGATCAGGACTTGTAACTGCTGCTGCTTCCTTTGTTAC
EY922483       --> GTTGCTCTGTACAGATCAGGACTTGTAACTGCTGCTGCTTCCTTTGTTAC
FD533025       --> GTTGTTCTGTACAGATCAGGACTTGTAACTGCTGCTGCTTCCTTTGTTAC
FD549083       --> GTTGTTCTGCACAGATCAGGACTTGTAACTGCTGCTGCTTCCTTTGTTAC
FD986899       --> GTTGTTCTGTACAGATCAGGACTTGTAACTGCTGCTGCTTCCTTTGTTAC
FD986957       --> GTTGTTCTGTACAGATCAGGACTTGTAACTGCTGCTGCTTCCTTTGTTAC
EX748197       --> GTTGTTCTGTACAGATCAGGACTTGTAACTGCTGCTGCTTCCTTTGTTAC
EV551667       --> GCTGTTCTGTACAGATCAGGACTTGTAACTGCTGCTGCTTCCTTTGTTAC

               296    -    346
UN10531        --> CGCTTCGTCTGCCGCCTTTCTACCGGAGAACTCATGGCTGAGTGAAACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753032       <-- ...................CTACCGGAGAACTCATGGCTGAGTGAAACAA
FD983060       <-- ...................CTACCGGAGAACTCATGGCTGAGTGAAACAA
EX752209       <-- ............................AACTCATGGCTGAGTGAAACAA
EY911890       <-- ...............................TCATGGCTGAGTGAAACAA
EV546724       <-- .................................ATGGCTGAGTGAAACAA
EX767322       <-- ......................................TGAGTGAAACAA
FD984116       <-- ..................................................
EX774236       <-- ..................................................
EY912385       <-- ..................................................
FD983103       <-- ..................................................
FD545175       <-- ..................................................
EY911765       <-- ..................................................
FD982650       <-- ..................................................
EX749302       --> CGCTTCGTCTGCCGCCTTTCTACCGGAGAACTCATGGCTGAGTGAAACAA
FD988187       --> CGCTTCGTCTGCCGCCTTTCTACCGGAGAACTCATGGCTGAGTGAAACAA
EX763204       --> CGCTTCGTCTGCCGCCTTTCTACCGGAGAACTCATGGCTGAGTGAAACAA
FD533350       --> CGCTTCGTCTGCCGCCTTTCTACCGGAGAACTCATGGCTGAGTGAAACAA
EY916023       --> CGCTTCGTCTGCCGCCTTTCTACCGGAGAACTCATGGCTGAGTGAAACAA
EY916165       --> CGCTTCGTCTGCCGCCTTTCTACCGGAGAACTCATGGCTGAGTGAAACAA
EY916758       --> CGCTTCGTCTGCCGCCTTTCTACCGGAGAACTCATGGCTGAGTGAAACAA
EY922483       --> CGCTTCGTCTGCCGCCTTTCTACCGGAGAACTCATGGCTGAGTGAAACAA
FD533025       --> CGCTTCGTCTGCCGCCTTTCTACCGGAGAACTCATGGCTGAGTGAAACAA
FD549083       --> CGCTTCGTCTGCCGCCTTTCTACCGGAGAACTCATGGCTGAGTGAAACAA
FD986899       --> CGCTTCGTCTGCCGCCTTTCTACCGGAGAACTCATGGCTGAGTGAAACAA
FD986957       --> CGCTTCGTCTGCCGCCTTTCTACCGGAGAACTCATGGCTGAGTGAAACAA
EX748197       --> CGCTTCGTCTGCCGCCTTTCTACCGGAGAACTCATGGCTGAGTGAAACAA
EV551667       --> CGCTTCGTCTGCCGCCTTTCTACCGGAGAACTCATGGCTGAGTGAAACAA

               346    -    396
UN10531        --> TCAAGCAAAACCAGGACTTGTTCTACCTTGTTGGTGCTGGTGGTTTGGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753032       <-- TCAAGCAAAACCAGGACTTGTTCTACCTTGTTGGTGCTGGTGGTTTGGGG
FD983060       <-- TCAAGCAAAACCAGGACTTGTTCTACCTTGTTGGTGCTGGTGGTTTGGGG
EX752209       <-- TCAAGCAAAACCAGGACTTGTTCTACCTTGTTGGTGCTGGTGGTTTGGGG
EY911890       <-- TCAAGCAAAACCAGGACTTGTTCTACCTTGTTGGTGCTGGTGGTTTGGGG
EV546724       <-- TCAAGCAAAACCAGGACTTGTTCTACCTTGTTGGTGCTGGTGGGTTGGGG
EX767322       <-- TCAAGCAAAACCAGGACTTGTTCTACCTTGTTGGTGCTGGTGGTTTGGGG
FD984116       <-- ................................GGTGCTGGTGGTTTGGGG
EX774236       <-- ..................................TGCTGGTGGTTTGGGG
EY912385       <-- ..............................................GGGG
FD983103       <-- ..............................................GGGG
FD545175       <-- ..................................................
EY911765       <-- ..................................................
FD982650       <-- ..................................................
EX749302       --> TCAAGCAAAACCAGGACTTGTTCTACCTTGTTGGTGCTGGTGGTTTGGGG
FD988187       --> TCAAGCAAAACCAGGACTTGTTCTACCTTGTTGGTGCTGGTGGTTTGGGG
EX763204       --> TCAAGCAAAACCAGGACTTGTTCTACCTTGTTGGTGCTGGTGGTTTGGGG
FD533350       --> TCAAGCAAAACCAGGATTTGTTCTACCCTGTTGGTGCTGGTGGTTTGGGG
EY916023       --> TCAAGCAAAACCAGGACTTGTTCTACCTTGTTGGTGCTGGTGGTTTGGGG
EY916165       --> TCAAGCAAAACCAGGACTTGTTCTACCTTGTTGGTGCTGGTGGTTTGGGG
EY916758       --> TCAAGCAAAACCAGGACTTGTTCTACCTTGTTGGTGCTGGTGGTTTGGGG
EY922483       --> TCAAGCAAAACCAGGACTTGTTCTACCTTGTTGGTGCTGGTGGTTTGGGG
FD533025       --> TCAAGCAAAACCAGGACTTGTTCTACCTTGTTGGTGCTGGTGGTTTGGGG
FD549083       --> TCAAGCAAAACCAGGACTTGTTCTACCTTGTTGGTGCTGGTGGTTTGGGG
FD986899       --> TCAAGCAAAACCAGGACTTGTTCTACCTTGTTGGTGCTGGTGGTTTGGGG
FD986957       --> TCAAGCAAAACCAGGACTTGTTCTACCTTGTTGGTGCTGGTGGTTTGGGG
EX748197       --> TCAAGCAAAACCAGGACTTGTTCTACCTTGTTGGTGCTGGTGGTTTGGGG
EV551667       --> TCAAGCAAAACCAGGACTTGTTCTACCTTGTTGGTGCTGGTGGGTTGGGG

               396    -    446
UN10531        --> CTTTCTCTGTTTCTTATTCATATATACGTAACGGAGATCAAGAGGACTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753032       <-- CTTTCTCTGTTTCTTATTCATATATACGTAACGGAGATCAAGAGGACTCT
FD983060       <-- CTTTCTCTGTTTCTTATTCATATCTATGTAACGGAGATCAAGAGGACTCT
EX752209       <-- CTTTCTCTGTTTCTTATTCATATATACGTAACGGAGATCAAGAAGACTCT
EY911890       <-- CTTTCTCTGTTTCTTATTCATATATACGTAACGGAGATCAAGAGGACTCT
EV546724       <-- CTTTCTCTGTTTCTTATTCATATATACGTAACGGAGATCAAGAGGACTCT
EX767322       <-- CTTTCTCTGTTTCTTATTCATATATACGTAATGGAGATCAAGAGGACTCT
FD984116       <-- CTTTCTCTGTTTCTTATTCATATCTATGTAACGGAGATCAAGAGGACTCT
EX774236       <-- CTTTCTCTGTTTCTTATTCATATATACGTAACGGAGATCAAGAGGACTCT
EY912385       <-- CTTTCTCTGTTTCTTATTCATATATACGTAACGGAAATCAAGAGGACTCT
FD983103       <-- CTTTCTCTGTTTCTTATTCATATCTATGTAACGGAGATCAAGAGGACTCT
FD545175       <-- ..................................................
EY911765       <-- ..................................................
FD982650       <-- ..................................................
EX749302       --> CTTTCTCTGTTTCTTATTCATATATACGTAACGGAGATCAAGAGGACTCT
FD988187       --> CTTTCTCTGTTTCTTATTCATATCTATGTAACGGAGATCAAGAGGACTCT
EX763204       --> CTTTCTCTGTTTCTTATTCATATATACGTAATGGAGATCAAGAGGACTCT
FD533350       --> CTTTCTCTGTTTCTTATTCATATATACGTAACGGAGATCAAGAGGACTCT
EY916023       --> CTTTCTCTGTTTCTTATTCATATATACGTAACGGAGATCAAGAGGACTCT
EY916165       --> CTTTCTCTGTTTCTTATTCATATATACGTAACGGAGATCAAGAGGACTCT
EY916758       --> CTTTCTCTGTTTCTTATTCATATATACGTAACGGAAATCAAGAGGACTCT
EY922483       --> CTTTCTCTGTTTCTTATTCATATATACGTAACGGAGATCAAGAGGACTCT
FD533025       --> CTTTCTCTGTTTCTTATTCATATATACGTAACGGAGATCAAGAGGACTCT
FD549083       --> CTTTCTCTGTTTCTTATTCATATATACGTAACGGAGATCAAGAGGACTCT
FD986899       --> CTTTCTCTGTTTCTTATTCATATCTATGTAACGGAGATCAAGAGGACTCT
FD986957       --> CTTTCTCTGTTTCTTATTCATATCTATGTAACGGAGATCAAGAGGACTCT
EX748197       --> CTTTCTCTGTTTCTTATTCATATATACGTAACGGAGATCAAGAAGACTCT
EV551667       --> CTTTCTCTGTTTCTTATTCATATATACGTAACGGAGATCAAGAGGACTCT

               446    -    496
UN10531        --> TCAGGCTTTGTGGGCACTTGGTGTTGTTGGTTCGTTCGCCACTTACGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753032       <-- TCAGGCTTTGTGGGTACTTGGTGTTGTTGGTTCGTTCGCCACTTACGCTG  Raphanus raphanistrum subsp. maritimus
FD983060       <-- TCAGGCTTTATGGGCACTTGGTGTTGTTGGTTCCTTTGCCACTTACGCTG  Raphanus raphanistrum subsp. landra
EX752209       <-- TCAGGCTTTGTGGGCACTTGGTGTTGTTGGTTCGTTCGCCACTTACGCTG  Raphanus raphanistrum subsp. maritimus
EY911890       <-- TCAGGCTTTGTGGGCACTTGGTGTTGTTGGTTCGTTCGCCACTTACGCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV546724       <-- TCAGGCTTTGTGGGCACTTGGTGTTGTTGGTTCGTTCGCCACTTACGCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX767322       <-- TCAGGCTTTGTGGGCACTTGGTGTTGTTGGTTCGTTCGCCACTTACGCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD984116       <-- TCAGGCTTTATGGGCACTTGGTGTTGTTGGTTCCTTTGCCACTTACGCTG  Raphanus raphanistrum subsp. landra
EX774236       <-- TCAGGCTTTGTGGGCACTTGGTGTTGTTGGTTCCTTTGCCACTTACGCTG  Raphanus raphanistrum subsp. landra
EY912385       <-- TCAGGCTTTGTGGGCACTTGGTGTTGTTGGTTCGTTCGCCACTTACGCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983103       <-- TCAGGCTTTATGGGCACTTGGTGTTGTTGGTTCCTTTGCCACTTACGCTG  Raphanus raphanistrum subsp. landra
FD545175       <-- .............GCACTTGGTGTTGTTGGTTCGTTCGCCACTTACGCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911765       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982650       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX749302       --> TCAGGCTTTGTGGGTACTTGGTGTTGTTGGTTCGTTCGCCACTTACGCTG  Raphanus raphanistrum subsp. maritimus
FD988187       --> TCAGGCTTTATGGGCACTTGGTGTTGTTGGTTCCTTTGCCACTTACGCTG  Raphanus raphanistrum subsp. landra
EX763204       --> TCAGGCTTTGTGGGCACTTGGTGTTGTTGGTTCGTTCGCCACTTACGCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD533350       --> TCAGGCTTTGTGGGCACTTGGTGTTGTTGGTTCGTTCGCCACTTACGCTG  Raphanus raphanistrum subsp. maritimus
EY916023       --> TCAGGCTTTGTGGGCACTTGGTGTTGTTGGTTCGTTCGCCACTTACGCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY916165       --> TCAGGCTTTGTGGGCACTTGGTGTTGTTGGTTCGTTCGCCACTTACGCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY916758       --> TCAGGCTTTGTGGGCACTTGGTGTTGTTGGTTCGTTCGCCACTTACGCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY922483       --> TCAGGCTTTGTGGGCACTTGGTGTTGTTGGTTCCTTTGCCACTTACGCTG  Raphanus raphanistrum subsp. landra
FD533025       --> TCAGGCTTTGTGGGCACTTGGTGTTGTTGGTTCGTTCGCCACTTACGCTG  Raphanus raphanistrum subsp. maritimus
FD549083       --> TCAGGCTTTGTGGGCACTTGGTGTTGTTGGTTCGTTCGCCACTTACGCTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD986899       --> TCAGGCTTTATGGGCACTTGGTGTTGTTGGTTCCTTTGCCACTTACGCTG  Raphanus raphanistrum subsp. landra
FD986957       --> TCAGGCTTTATGGGCACTTGGTGTTGTTGGTTCCTTTGCCACTTACGCTG  Raphanus raphanistrum subsp. landra
EX748197       --> TCAGGCTTTGTGGGCACTTGGTGTTGTTGGTTCGTTCGCCACTTACGCTG  Raphanus raphanistrum subsp. maritimus
EV551667       --> TCAGGCTTTGTGGGCACTTGGTGTTGTTGGTTCGTTCGCCACTTACGCTG  Raphanus raphanistrum subsp. raphanistrum (NY)

               496    -    546
UN10531        --> CCCTTGCTATACCAGCCAGTGATAGCTTGGTTCATTATGTCGTTGGTCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753032       <-- CCCTTGCTATACCAGCCAGTGATAGCCTGGTTCATTATGTCGTTGGTCAT
FD983060       <-- CCCTTGCTAGACCCGCCAGTGATAGCTTGGTTCATTATGTCGTTGGTCAT
EX752209       <-- CCCTTGCTATACCAGCCAGTGATAGCTTGGTTCATTATGTCGTTGGTCAT
EY911890       <-- CCCTTGCTATACCAGCCAGTGATAGCTTGGTTCATTATGTCGTTGGTCAT
EV546724       <-- CCCTTGCTATACCAGCCAGTGATAGCTTGGTTCATTATGTCGTCGGTCAT
EX767322       <-- CCCTTGCTATACCAGCCAGTGATAGCTTGGTTCACTATGTCGTTGGTCAT
FD984116       <-- CCCTTGCTAGACCCGCCAGTGATAGCTTGGTTCATTATGTCGTTGGTCAT
EX774236       <-- CCCTTACTATACCAGCCAGTGATAGCTTGGTTCATTATGTCGTTGGTCAT
EY912385       <-- CCCTTGCTATACCAGCCAGTGATAGCTTGGTTCATTATGTCGTTGGTCAT
FD983103       <-- CCCTTGCTAGACCCGCCAGTGATAGCTTGGTTCATTATGTCGTTGGTCAT
FD545175       <-- CCCTTGCTATACCAGCCAGTGATAGCTTGGTTCATTATGTCGTTGGTCAT
EY911765       <-- ..........ACCAGCCAGTGATAGCTTGGTTCATTATGTCGTTGGTCAT
FD982650       <-- ..................................................
EX749302       --> CCCTTGCTATACCAGCCAGTGATAGCCTGGTTCATTATGTCGTTGGTCAT
FD988187       --> CCCTTGCTAGACCCGCCAGTGATAGCTTGGTTCATTATGTCGTTGGTCAT
EX763204       --> CCCTTGCTATACCAGCCAGTGATAGCTTGGTTCACTATGTCGTTGGTCAT
FD533350       --> CCCTTGCTATACCAGCCAGTGATAGCTTGGTTCATTATGTCGTTGGTCAT
EY916023       --> CCCTTGCTATACCAGCCAGTGATAGCTTGGTTCATTATGTCGTTGGTCAT
EY916165       --> CCCTTGCTATACCAGCCAGTGATAGCTTGGTTCATTATGTCGTTGGTCAT
EY916758       --> CCCTTGCTATACCAGCCAGTGATAGCTTGGTTCATTATGTCGTTGGTCAT
EY922483       --> CCCTTGCTATACCAGCCAGTGATAGCTTGGTTCATTATGTCGTTGaggat
FD533025       --> CCCTTGCTATACCAGCCAGTGATAGCTTGGTTCATTATGTCGTTGGTCAT
FD549083       --> CCCTTGCTATACCAGCCAGTGATAGCTTGGTTCATTATGTCGTTGGTCAT
FD986899       --> CCCTTGCTAGACCCGCCAGTGATAGCTTGGTTCATTATGTCGTTGGTCAT
FD986957       --> CCCTTGCTAGACCCGCCAGTGATAGCTTGGTTCATTATGTCGTTGGTCAT
EX748197       --> CCCTTGCTATACCAGCCAGTGATAGCTTGGTTCATTATGTCGTTGGTCAT
EV551667       --> CCCTTGCTATACCAGCCAGTGATAGCTTGGTTCATTATGTCGTCGGTCAT

               546    -    596
UN10531        --> CCAACTGCTGTTTGGTTTGTTGGTCCTCTTTTCGCTTCCCTCACTGGGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753032       <-- CCAACTGCTGTTTGGTTTGTTGGTCCTCTTTTCGCTTCCCTCACTGGGCT
FD983060       <-- CCAACTGCTGTTTGGTTTGTTGTTCCTCTTTTCGCTTCCCTCACTGGGCT
EX752209       <-- CCAACTGCTGTTTGGTTTGTTGGTCCTCTTTTCGCTTCCCTCACTGGGCT
EY911890       <-- CCAACTGCTGTTTGGTTTGTTGGTCCTCTTTTCGCTTCCCTCACTGGGCT
EV546724       <-- CCAACTGCTGTTTGGTTTGTTGGTCCTCTTTTCGCTTCCCTCACTGGGCT
EX767322       <-- CCAACTGCTGTTTGGTTTGTTGGTCCTCTTTTCGCTTCCCTCACTGGGCT
FD984116       <-- CCAACTGCTGTTTGGTTTGTTGGTCCTCTTTTCGCTTCCCTCACTGGGCT
EX774236       <-- CCAACTGCTGTTTGGTTTGTTGGTCCTCTTTTCGCTTCCCTCACTGGGCT
EY912385       <-- CCAACTGCTGTTTGGTTTGTTGGTCCTCTTTTCGCTTCCCTCACTGGGCT
FD983103       <-- CCAACTGCTGTTTGGTTTGTTGTTCCTCTTTTCGCTTCCCTCACTGGGCT
FD545175       <-- CCAACTGCTGTTTGGTTTGTTGGTCCTCTTTTCGCTTCCCTCACTGGGCT
EY911765       <-- CCAACTGCTGTTTGGTTTGTTGGTCCTCTTTTCGCTTCCCTCACTGGGCT
FD982650       <-- CCAACTGCTGTTTGGTTTGTTGGTCCTCTTTTCGCTTCCCTCACTGGGCT
EX749302       --> CCAACTGCTGTTTGGTTTGTTGGTCCTCTTTTCGCTTCCCTCACTGGGCT
FD988187       --> CCAACTGCTGTTTGGTTTGTTGGTCCTCTTTTCGCTTCCCTCACTGGGCT
EX763204       --> CCA-CTGCTGTTTGGTTTGTTGGTCC........................
FD533350       --> CCAACCGCTGTTTGGTTTGTTGGTCCTCTTTTCGCTTCCCTCACTGGGCT
EY916023       --> CCAACTGCTGTTTGGTTTGTTGGTCCTCTTTTCGCTTCCCTCACTGGGCT
EY916165       --> CCAACTGCTGTTTGGTTTGTTGGTCCTCTTTTCGCTTCCCTCACTGGGCT
EY916758       --> CCAACTGCTGTTTGGTTTGTTGGTCCTCTTTTCGCTTCCCTCACTGGGCT
EY922483       --> aatgctcgatgta.....................................
FD533025       --> CCAACTGCTGTTTGGTTTGTTGGTCCTCTTTTCGCTTCCCTCACTGGGCT
FD549083       --> CCAACTGCTGTTTGGTTTGTTGGTCCTCTTTTCGCTTCCCTCACTGGGCT
FD986899       --> CCAACTGCTGTTTGGTTTGTTGTTCCTCTTTTCGCTTCCCTCACTGGGCT
FD986957       --> CCAACTGCTGTTTGGTTTGTTGTTCCTCTTTTCGCTTCCCTCACTGGGCT
EX748197       --> CCAACTGCTGTTTGGTTTGTTGGTCCTCTTTTCGCTTCCCTCACTGGGCT
EV551667       --> CCAACTGCTGTTTGGTTTGTTGGTCCTCTTTTCGCTTCCCTCACTGGGCT

               596    -    646
UN10531        --> CGTTTTCAAAGAAGGGCTCTGTTACGGTAAGCTAGAAGCTGGCCTTCTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753032       <-- CGTATTCAAAGAAGGGCTCTGTTACGGTAAGCTAGAAGCTGGCCTTCTTA  Raphanus raphanistrum subsp. maritimus
FD983060       <-- CGTTTTCAAAGAAGGGCTGTGTTACGGTAAGCTAGAAGCTGGCCTTCTTA  Raphanus raphanistrum subsp. landra
EX752209       <-- CGTTTTCAAAGAAGGGCTCTGTTACGGTAAGCTAGAAGCTGGCCTTCTTA  Raphanus raphanistrum subsp. maritimus
EY911890       <-- CGTTTTCAAAGAAGGGCTCTGTTACGGTAAGCTAGAAGCTGGCCTTCTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV546724       <-- CGTTTTCAAAGAAGGGCTCTGTTACGGTAAGCTAGAAGCTGGCCTTCTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX767322       <-- CGTTTTCAAAGAAGGGCTCTGTTACGGTAAGCTAGAAGCTGGCCTTCTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD984116       <-- CGTTTTCAAAGAAGGGCTGTGTTACGGTAAGCTAGAAGCTGGCCTTCTTA  Raphanus raphanistrum subsp. landra
EX774236       <-- CGTTTTCAAAGAAGGGCTGTGTTACGGTAAGCTAGAAGCTGGCCTTCTTA  Raphanus raphanistrum subsp. landra
EY912385       <-- CGTTTTCAAAGAAGGGCTCTGTTACGGTAAGCTAGAAGCTGGCCTTCTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983103       <-- CGTTTTCAAAGAAGGGCTGTGTTACGGTAAGCTAGAAGCTGGCCTTCTTA  Raphanus raphanistrum subsp. landra
FD545175       <-- CGTTTTCAAAGACGGGCTCTGTTACGGTAAGCTAGAAGCTGGCCTTCTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911765       <-- CGTTTTCAAAGAAGGGCTCTGTTACGGTAAGCTAGAAGCTGGCCTTCTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982650       <-- CGTTTTCAAAGAAGGGCTGTGTTACGGTAAGCTAGAAGCTGGCCTTCTTA  Raphanus raphanistrum subsp. landra
EX749302       --> CGTATTCAAAGAAGGGCTCTGTTACGGTAAGCTAGAAGCTGGCCTTCTTA  Raphanus raphanistrum subsp. maritimus
FD988187       --> CGTTTTCAAAGAAGGGCTGTGTTACGGTAAGCTAGAAGCTGGCCTTCTTA  Raphanus raphanistrum subsp. landra
EX763204       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD533350       --> CGTTTTCAAAGAAGGGCTCTGTTACGGTAAGCTAGAAGCTGGCCTTCTTA  Raphanus raphanistrum subsp. maritimus
EY916023       --> CGTTTTCAAAGAAGGGCTCTGTTACGGTAAGCTAGAAGCTGGCCTTCTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY916165       --> CGTTTTCAAAGA......................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY916758       --> CGTTTTCAAAGAAAGGCTCTGTTACG-TAAGCTAGAAGCTGGCCTTCTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY922483       --> ..................................................  Raphanus raphanistrum subsp. landra
FD533025       --> CGTTTTCAAAGAAGGGCTCTGTTACGGTAAGCTAGAAGCTGGCCTTCTTA  Raphanus raphanistrum subsp. maritimus
FD549083       --> CGTTTTCAAAGACGGGCTCTGT............................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD986899       --> CGTTTTCAAAGAAGGGCTGTGTTACGGTAAGCTAGAAGCTGGCCTTCTTA  Raphanus raphanistrum subsp. landra
FD986957       --> CGTTTTCAAAGAAGGGCTGTGTTACGGTAAGCTAGAAGCTGGCCTTCTTA  Raphanus raphanistrum subsp. landra
EX748197       --> CGTTTTCAAAGAAGGGCTCTGTTACGGTAAGCTAGAAGCTGGCCTTCTTA  Raphanus raphanistrum subsp. maritimus
EV551667       --> CGTTTTCAAAGAAGGGCTCTGTTACGGTAAGCTAGAAGCTGGCCTTCTTA  Raphanus raphanistrum subsp. raphanistrum (NY)

               646    -    696
UN10531        --> CATTCATCATACCCATAGTACTTCTCGGGCATTTGAGTGGCCTGATGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753032       <-- CATTCATCATACCCATAGTACTTCTCGGGCATTTGAGTGGCCTGATGAAT  Raphanus raphanistrum subsp. maritimus
FD983060       <-- CATTCATCATACCCTCAGTACTTCTCGGGCATTTGAGTGGCCTGATGAAT  Raphanus raphanistrum subsp. landra
EX752209       <-- CATTCATCATACCCATAGTACTTCTCGGGCATTTGAGTGGCCTGACGAAT  Raphanus raphanistrum subsp. maritimus
EY911890       <-- CATTCATCATACCCATAGTACTTCTCGGGCATTTGAGTGGCCTGATGAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV546724       <-- CATTCATCATACCCATAGTACTTCTCGGGCATTTGAGTGGCCTGATGAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX767322       <-- CATTCATCATACCCATAGTACTTCTCGGGCATTTGAGTGGCCTGATGAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD984116       <-- CATTCATCATACCCTCAGTACTTTTCGGGCATTTGAGTGGCCTGATGAAT  Raphanus raphanistrum subsp. landra
EX774236       <-- CATTCATCATACCCTCAGTACTTCTCGGGCATTTGAGTGGCTTGATGAAT  Raphanus raphanistrum subsp. landra
EY912385       <-- CATTCATCATACCCATAGTACTTCTCGGGCATTTGAGTGGCCTGATGAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD983103       <-- CATTCATCATACCCTCAGTACTTCTCGGGCATTTGAGTGGCCTGATGAAT  Raphanus raphanistrum subsp. landra
FD545175       <-- CATTCATCATACCCATAGTACTTCTCGGGCATTTGAGTGGCCTGATGAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911765       <-- CATTCATCATACCCATAGTACTTCTCGGGCATTTGAGTGGCCTGATGAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982650       <-- CATTCATCATACCCTCAGTACTTCTCGGGCATTTGAGTGGCCTGATGAAT  Raphanus raphanistrum subsp. landra
EX749302       --> CATTCATCATACCCATAGTACTTCTCGGGCATTTGAGTGGCCTGATGAAT  Raphanus raphanistrum subsp. maritimus
FD988187       --> CATTCATCATACCCTCAGTACTTCTCGGGCATTTGAGTGGCCTGATGAAT  Raphanus raphanistrum subsp. landra
EX763204       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD533350       --> CATTCATCATACCCATAGTACTTCTCGGGC....................  Raphanus raphanistrum subsp. maritimus
EY916023       --> CATTCATCATACCCATAGTACTTCTCGGGCATTTGAGTGGCCTGATGAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY916165       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY916758       --> CATTCATCATACCCATAGTACTTCTCGGGCATTTGAGTGGCCTGATGAAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY922483       --> ..................................................  Raphanus raphanistrum subsp. landra
FD533025       --> CATTCATCATACCCATAGTACTTCTCGGGCATTTGAGTGGCCTGATGAAT  Raphanus raphanistrum subsp. maritimus
FD549083       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD986899       --> CATTCATCATACCCTCAGTACTTCTCGGGCATTTGAGTGGCCTGATGAAT  Raphanus raphanistrum subsp. landra
FD986957       --> CATTCATCATACCCTCAGTACTTCTCGGGCATTTGAGTGGCCTGATGAAT  Raphanus raphanistrum subsp. landra
EX748197       --> CATTCATCATACCCATAGTACTTCTCGGGCATTTGAGTGGCCTGACGAAT  Raphanus raphanistrum subsp. maritimus
EV551667       --> CATTCATCATACCCATAGTACTTCTCGGGCATTTGAGTGGCCTGATGAAT  Raphanus raphanistrum subsp. raphanistrum (NY)

               696    -    746
UN10531        --> GATGAGGCGAAACTGGTGTTGCTAGGAACATGGATGGCACTCTTTGTAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753032       <-- GATGAGGCGAAACTGGTGTTGCTAGGAACATGGATGGCACTCTTTGTAGT
FD983060       <-- GATGAGGCGAAACTGGTGTTGCTAGGAACATGGATGGCACTCTTTGTAGT
EX752209       <-- GATGAGGCGAAACTGGTGTTGCTAGGAACATGGATGGCACTCTTTGTAGT
EY911890       <-- GATGAGGCGAAACTGGTGTTGCTAGGAACATGGATGGCACTCTTTGTAGT
EV546724       <-- GATGAGGCGAAACTGGTGTTGCTAGGAACATGGATGGCACTCTTTGTAGT
EX767322       <-- GATGAGGCGAAACTGGTGTTGCTAGGAACATGGATGGCACTCTTTGTAGT
FD984116       <-- GATGAGGCGAAACTGGTGTTGCTAGGAACATGGATGGCACTCTTTGTAGT
EX774236       <-- GATGAGGCGAAACTGGTGTTGCTAGGAACATGGATGGCACTCTTTGTAGT
EY912385       <-- GATGAGGCGAAACTGGTGTTGCTAGGAACATGGATGGCACTCTTTGTAGT
FD983103       <-- GATGAGGCGAAACTGGTGTTGCTAGGAACATGGATGGCACTCTTTGTAGT
FD545175       <-- GATGAGGCGAAACTGGTGTTGCTAGGAACATGGATGGCACTCTTTGTAGT
EY911765       <-- GATGAGGCGAAACTGGTGTTGCTAGGAACATGGATGGCACTCTTTGTAGT
FD982650       <-- GATGAGGCGAAACTGGTGTTGCTAGGAACATGGATGGCACTCTTTGTAGT
EX749302       --> GATGAG-CGAAACTGGTGTTGCTAGGAACATGGATGGCACTCTTTGTAGT
FD988187       --> GATGAGGCGAAACTGGTGTTGCTAGGAACATGGATGGCACTCTTTGTAGT
EX763204       --> ..................................................
FD533350       --> ..................................................
EY916023       --> GATGAG-CGAAA......................................
EY916165       --> ..................................................
EY916758       --> GATG..............................................
EY922483       --> ..................................................
FD533025       --> GATGAGGCGAAACTGGTGTTGCTAGGAACATGGATGGCACTCTTTGTAGT
FD549083       --> ..................................................
FD986899       --> GATGAGGCGAAACTGGTGTTGCTAGGAACATGGATGGCACTCTTTGTAGT
FD986957       --> GATGAGGCGAAACTGGTGTTGCTAGGA-CATGGATGGCACTCTTTGTAGT
EX748197       --> GATGAG-CGAAACTGGTGTTGCTAG-AACATGGATGGCACTCTTTGTAGT
EV551667       --> GATGAGGCGAAACTGGTGTTGCTAGGAACATGGATGGCACTCTTTGTAGT

               746    -    796
UN10531        --> ATTTGCTGGAAGGAAATTCACTCAGCCTATTAAGGATGATATTGGGGATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753032       <-- ATTTGCTGGAAGGAAATTCACTCAGCCTATTAAGGATGATATTGGGGATA
FD983060       <-- ATTTGCTGGAAGGAAATTCACTCAGCCTATTAAGGATGATATTGGGGAAA
EX752209       <-- ATTTGCTGGAAGGAAACTCACTCAGCCTATTAAGGATGATATTGGGGATA
EY911890       <-- ATTTGCTGGAAGGAAATTCACTCAGCCTATTAAGGATGATATTGGGGATA
EV546724       <-- ATTTGCTGGAAGGAAATTCACTCAGCCTATTAAGGATGATATTGGGGATA
EX767322       <-- ATTTGCTGGAAGGAAATTCACTCAGCCTATTAAGGATGATATTGGGGATA
FD984116       <-- ATTTGCTGGAAGGAAATTCACTCAGCCTATTAAGGATGATATTGGGGATA
EX774236       <-- ATTTGCTGGAAGGAAATTCACTCAGCCTATTAAGGATGATATTGGGGATA
EY912385       <-- ATTTGCTGGAAGGAAATTCACTCAGCCTATTAAGGATGATATTGGGGATA
FD983103       <-- ATTTGCTGGAAGGAAATTCACTCAGCCTATTAAGGATGATATTGGGGAAA
FD545175       <-- ATTTGCTGGAAGGAAATTCACTCAGCCTATTAAGGATGATATTGGGGATA
EY911765       <-- ATTTGCTGGAAGGAAATTCACTCAGCCTATTAAGGATGATATTGGGGATA
FD982650       <-- ATTTGCTGGAAGGAAATTCACTCAGCCTATTAAGGATGATATTGGGGATA
EX749302       --> ATTTGCTGGAAG-AAA-TCACTCAGC-TATTAAG-ATGATATTGGGGATA
FD988187       --> ATTTGCTGGAAGGAA-TTCACTCAGCCT......................
EX763204       --> ..................................................
FD533350       --> ..................................................
EY916023       --> ..................................................
EY916165       --> ..................................................
EY916758       --> ..................................................
EY922483       --> ..................................................
FD533025       --> ATTTGC............................................
FD549083       --> ..................................................
FD986899       --> ATTTGCTGG.........................................
FD986957       --> ATTTGCTGGAA.......................................
EX748197       --> ATTTGCTGGAggaactcact..............................
EV551667       --> ATTTGCTGGAAGGAAATTCACTCAGCCTATTAAGGATGATATTGGGGATA

               796    -    846
UN10531        --> AATCTGTTTT-CATGTTCATGGCTCTTCCGGAAGATGAGAAAAAA-GCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753032       <-- AATCTTTTTT-CATGTTCATGGCTCTTCCGGAAGATGAGAAAAAA-GCTG
FD983060       <-- AATCTGTTTT-CATGTTCATGGCTCTTCCGGAAGATGAGAAAAAA-GCTG
EX752209       <-- AATCTGTTTT-CATGTTCATGGCTCTTCCGGAAGATGAGAAAAAA-GCTG
EY911890       <-- AATCTGTTTT-CATGTTCATGGCTCTTCCGGAAGATGAAAAAAAA-GCTG
EV546724       <-- AATCTGTTTT-CATGTTCATGGCTCTTCCGGAAGATGAGAAAAAA-GCTG
EX767322       <-- AATCTGTTTT-CATGTTCATGGCTCTTCCGGAAGATGAGAAAAAA-GCTG
FD984116       <-- AATCTGTTTT-CATGTTCATGGCTCTTCCGGAAGATGAGAAAAAA-GCTG
EX774236       <-- AATCTGTTTT-CATGTTCACGGCTCTTCCGGAAGATGAGAAAAAA-GCTG
EY912385       <-- AATCTGTTTT-CATGTTCATGGCTCTTCCGGAAGATGAGAAAAAA-GCTG
FD983103       <-- AATCTGTTTT-CATGTTCATGGCTCTTCCGGAAGATGAGAAAAAA-GCTG
FD545175       <-- AATCTGTTTT-CATGTTCATGGCTCTTCCGGAAGATGAGAAAAAA-GCTG
EY911765       <-- AATCTGTTTT-CATGTTCATGGCTCTTCCGGAAGATGAGAAAAAAAGCTG
FD982650       <-- AATCTGTTTTTCATGTTCATGGCTCTTCCGGAAGATGAGAAAAAA-GCTG
EX749302       --> Atctt.............................................
FD988187       --> ..................................................
EX763204       --> ..................................................
FD533350       --> ..................................................
EY916023       --> ..................................................
EY916165       --> ..................................................
EY916758       --> ..................................................
EY922483       --> ..................................................
FD533025       --> ..................................................
FD549083       --> ..................................................
FD986899       --> ..................................................
FD986957       --> ..................................................
EX748197       --> ..................................................
EV551667       --> AATCTGTTTT-CATGTTCATGGCTCTTCCGGAAGATGAGAAAAAA-GCTG

               846    -    896
UN10531        --> TAGTTGCAAAACTCGAGCAAGATAACTCTGGGTAAGACTCTTAATGCTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753032       <-- TAGTTGCAAAACTCGAGCAAGATAACTCTGGGTAAGACTCTTAATGCTTA
FD983060       <-- TAGTTGCAAAACTCGAGCAAGATAACTCTGGGTAAGACTCTTAATGCTTA
EX752209       <-- TAGTTGCAAAACTCGAGCAAGATAACTCTGGGTAAGACTCTTAATGCTTA
EY911890       <-- TAGTTGCAAAACTCGAGCAAGATAACTCTGGGTAAGACTCTTAATGCTTA
EV546724       <-- TAGTTGCAAAACTCGAGCAAGATAACTCTGGGTAAGACTCTTAATGCTTA
EX767322       <-- TAGTTGCAAAACTCGAGCAAGATAACTCTGGGTAAGACTCTTAATGCTTA
FD984116       <-- TAGTTGCAAAACTCGAGCAAGATAACTCTGGGTAAGACTCTTAATGCTTA
EX774236       <-- TAGTTGCAAAACTCGAGCAAGATAACTCTGGGTAAGACTCTTAATGCTTA
EY912385       <-- TAGTTGCAAAACTCGAGCAAGATAACTCTGGGTAAGACTCTTAATGCTTA
FD983103       <-- TAGTTGCAAAACTCGAGCAAGATAACTCTGGGTAAGACTCTTAATGCTTA
FD545175       <-- TAGTTGCAAAACTCGAGCAAGATAACTCTGGGTAAGACTCTTAATGCTTA
EY911765       <-- TAGTTGCAAAACTCGAGCAAGATAACTCTGGGTAAGACTCTTAATGCTTA
FD982650       <-- TAGTTGCAAAACTCGAGCAAGATAACTCTGGGTAAGACTCTTAATGCTTA
EX749302       --> ..................................................
FD988187       --> ..................................................
EX763204       --> ..................................................
FD533350       --> ..................................................
EY916023       --> ..................................................
EY916165       --> ..................................................
EY916758       --> ..................................................
EY922483       --> ..................................................
FD533025       --> ..................................................
FD549083       --> ..................................................
FD986899       --> ..................................................
FD986957       --> ..................................................
EX748197       --> ..................................................
EV551667       --> TAGTTGCAAAACTCGAGCAAGATAACTCTGGGTAAGACTCTTAATGCTTA

               896    -    946
UN10531        --> GAAAATGTTATCTTCAAGAACAGGTAAATATCATGTACCCGTATGAGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753032       <-- GAAAATGTTATCTTCGAGAACAGGTAAATATCATGTACCCGTATGAGGAG
FD983060       <-- GAAAATGTTATCTTCAAGAACAGGTAAATATCATGTACCCGTATGAGGAG
EX752209       <-- GAAAATGTTATCTTCAAGAACAGGTAAATATCATGTACCCGTATGAGGAG
EY911890       <-- GAAAATGTTATCTTCAAGAACAGGTAAATATCATGTACCCGTATGAGGAG
EV546724       <-- GAAAATGTTATCTTCAAGAACAGGTAAATATCATGTACCCGTATGAGGAG
EX767322       <-- GAAAATGTTATCTTCAAGAACAGGTAAATATCATGTACCCGTATGAGGAG
FD984116       <-- GAAAATGTTATCTTCAAGAACAGGTAAATATCATGTACCCGTATGAGGAG
EX774236       <-- GAAAATGTTATCTTCAAGAACAGGTAAATATCATGTACCCGTATGAGGAG
EY912385       <-- GAAAATGTTATCTTCAAGAACAGGTAAATATCATGTACCCGTATGAGGAG
FD983103       <-- GAAAATGTTATCTTCAAGAACAGGTAAATATCATGTACCCGTATGAGGAG
FD545175       <-- GAAAATGTTATCTTCAAGAACAGGTAAATATCATGTACCCGTATGAGGAG
EY911765       <-- GAAAATGTTATCTCCAAGAACAGGTAAATATCATGTACCCGTATGAGGAG
FD982650       <-- GAAAATGTTATCTTCAAGAACAGGTAAATATCATGTACCCGTATGAGGAG
EX749302       --> ..................................................
FD988187       --> ..................................................
EX763204       --> ..................................................
FD533350       --> ..................................................
EY916023       --> ..................................................
EY916165       --> ..................................................
EY916758       --> ..................................................
EY922483       --> ..................................................
FD533025       --> ..................................................
FD549083       --> ..................................................
FD986899       --> ..................................................
FD986957       --> ..................................................
EX748197       --> ..................................................
EV551667       --> GAAAATGTTATCTTCAA.................................

               946    -    996
UN10531        --> AGACGTTACCATAAACAGTTTGTACATCTTATGAGCATTGATAGATTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753032       <-- AGACGTTACCATAAACAGTTTGTACATCTTATGAGCATTGATA.......
FD983060       <-- AGACGTTACCATAAACAGTTTGTACATCTTATGAGCATTGATAGATTTCC
EX752209       <-- AGACGTTACCATAAACAGTTTGTACATCTTATGAGCATTGATAGATTTCC
EY911890       <-- AGACGTTACCATAAACAGTTTGTACATCTTATGAGCATTGATAGATTTCC
EV546724       <-- AGACGTTACCATAAACAGTTTGTACATCTTATGAGCATTGATAGATTTCC
EX767322       <-- AGACGTTACCATAAACAGTTTGTACATCTTATGAGCATTGATAGATTTCC
FD984116       <-- AGACGTTACCATAAACAGTTTGTACATCTTATGAGCATTGATAGATTTCC
EX774236       <-- AGACGTTACCATAAACAGTTTGTACATCTTATGAGCATTGATAGATTTCC
EY912385       <-- AGACGTTACCATAAACAGTTTGTACATCTTATGAGCATTGATAGATTTCC
FD983103       <-- AGACGTTACCATAAACAGTTTGTACATCTTATGAGCATTGATAGATTTCC
FD545175       <-- AGACGTTACCATAAACAGTTTGTACATCTTATGAGCATTGATAGATTTCC
EY911765       <-- AGACGTTACCATAAACAGTTTGTACATCTTATGAGCATTGATAGATTTCC
FD982650       <-- AGACGTTACCATAAACAGTTTGTACATCTTATGAGCATTGATAGATTTCC
EX749302       --> ..................................................
FD988187       --> ..................................................
EX763204       --> ..................................................
FD533350       --> ..................................................
EY916023       --> ..................................................
EY916165       --> ..................................................
EY916758       --> ..................................................
EY922483       --> ..................................................
FD533025       --> ..................................................
FD549083       --> ..................................................
FD986899       --> ..................................................
FD986957       --> ..................................................
EX748197       --> ..................................................
EV551667       --> ..................................................

               996    -   1046
UN10531        --> TGCTTCACATGGGCTGTTGTAATGGGCCTGTCCAGCCCAGGTCGGACTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753032       <-- ..................................................
FD983060       <-- TGCTTCACATGGGCTGTTGTAATGGGCCTGTCCAGCCCAGGTCGGACTCT
EX752209       <-- TGCTTCACATGGGCTGTTGTAATGGGCCTGTCCAGCCCAGGTCGGACTCT
EY911890       <-- TGCTTCACATGGGCTGTTGTAATGGGCCTGTCCAGCCCAGGTCGGACTCT
EV546724       <-- TGCTTCACATGGGCTGTTGTAATGGGCCTGTCCAGCCCAGGTCGGACTCT
EX767322       <-- TGCTTCACATGGGCTGTTGTAATGGGCCTGTCCAGCCCAGGTCGGACTCT
FD984116       <-- TGCTTCACATGGGCTGTTGTAAT-TGCCTGTCCAGCCCAGGTCGGACTCT
EX774236       <-- TGCTTCACATGGGCTGTTGTAATGGGCCTGTCCAGCCCAGGTCGGACTCT
EY912385       <-- TGCTTCACATGGGCTGTTGTAATGGGCCTGTCCAGCCCAGGTCGGACTCT
FD983103       <-- TGCTTCACATGGGCTGTTGTAATGGGCCTGTCCAGCCCAGGT........
FD545175       <-- TGCTTCACATGGGCTGTTGTAATGGGCCTGTCCAGCCCAGGTCGGACTCT
EY911765       <-- TGCTTCACATGGGCTGTTGTAATGGGCCTGTCCAGCCCAGGTCGGACTCT
FD982650       <-- TGCTTCACATGGGCTGTTGTAATGGGCCTGTCCAGCCCAGGTCGGACTCT
EX749302       --> ..................................................
FD988187       --> ..................................................
EX763204       --> ..................................................
FD533350       --> ..................................................
EY916023       --> ..................................................
EY916165       --> ..................................................
EY916758       --> ..................................................
EY922483       --> ..................................................
FD533025       --> ..................................................
FD549083       --> ..................................................
FD986899       --> ..................................................
FD986957       --> ..................................................
EX748197       --> ..................................................
EV551667       --> ..................................................

               1046   -   1096
UN10531        --> GACTTGGCCTTTATTTCATTATTAATATTAAGGTCTTGTTGTCCCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX753032       <-- ...............................................
FD983060       <-- GACTTGGCCTTTATTTCATTATTAATATTAAGGTCT...........
EX752209       <-- GACTTGGCCTTTATTTCATTATTAATATTAAGGTCTTGTTGTCCC..
EY911890       <-- GACTTGGCCTTTATTTCATTATTAATATTAAGGTCTTGTTGTCCCTC
EV546724       <-- GACTTGGCCTTTATTTCATTATTAATATTAAGGTCTTGTTGTCCC..
EX767322       <-- GACTTGGCCTTTATTTCATTATTAATATTAAGGTCTTGTTGTCCCT.
FD984116       <-- GACTTGGCCTTTATTTCATTATTAATATTAAGGTCTTGTTGTCCCc.
EX774236       <-- GACTTGGCCTTTATTTCATTATTAATATTAAGGTCTTGTTGTC....
EY912385       <-- GACTTGGCCTTTATTTCATTATTAATATTAAGGTCTTGTTGTCCC..
FD983103       <-- ...............................................
FD545175       <-- GACTTGGCCTTTATTTCATTATTAATATTAAGGTCTTGTTGTCCCTC
EY911765       <-- GACTTGGCCTTTATTTCATTATTAATATTAAGGTCTTGTTGTCCCc.
FD982650       <-- GACTTGGCCTTTATTTCATTATTAATATTAAGGTCTTGTTGTCCCTC
EX749302       --> ...............................................
FD988187       --> ...............................................
EX763204       --> ...............................................
FD533350       --> ...............................................
EY916023       --> ...............................................
EY916165       --> ...............................................
EY916758       --> ...............................................
EY922483       --> ...............................................
FD533025       --> ...............................................
FD549083       --> ...............................................
FD986899       --> ...............................................
FD986957       --> ...............................................
EX748197       --> ...............................................
EV551667       --> ...............................................