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Alignment for radish unigene UN10545

               1      -     51
UN10545        --> ATATATAATTCCTCTCACATCCTTCATTTATAAAATTCCTTATTGGTAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524810       <-- .............................ATAAAATTCCTTATTGGTAAA
FD551441       <-- ..................................................
EX896423       <-- ..................................................
EX746471       <-- ..................................................
FD940709       <-- ..................................................
EY924535       <-- ..................................................
EY939231       <-- ..................................................
EY925196       <-- ..................................................
EY920172       --> ATATATAATTCCTCTCACATCCTTCATTTATAAAATTCCTTATTGGTAAA
EV529714       --> .............................ATAAAATTCCTTATTGGTAAA
EX750870       --> .............................ATAAAATTCCTTATTGGTAAA
FD936521       --> .............................ATAAAATTCCTTATTGGTAAA
EX900352       --> ...........................................TGGTAAA

               51     -    101
UN10545        --> TTTTGTAATATACTTGACATTTAGATTTGAGAACAAAAACGAATTCTACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524810       <-- TTTTGTAATATACTTGACATTTAGATTTGAGAACAAAAACGAATTCTACA
FD551441       <-- ..................................................
EX896423       <-- ..................................................
EX746471       <-- ..................................................
FD940709       <-- ..................................................
EY924535       <-- ..................................................
EY939231       <-- ..................................................
EY925196       <-- ..................................................
EY920172       --> TTTTGTAATACACTTGACATTTAGATTTGAGAACAAAAACGAATTCTACA
EV529714       --> TTTTGTAATATACTTGACATTTAGATTTGAGAACAAAAACGAATTCTACA
EX750870       --> TTTTGTAATATACTTGACATTTAGATTTGAGAACAAAAACGAATTCTACA
FD936521       --> TTTTGTAATACACTTGACATTTAGATTTGAGAACAAAAACGAATTCTACA
EX900352       --> TTTTGTAATACACTTGACATTTAGATTTGAGGACAAAAACGAATTCTACA

               101    -    151
UN10545        --> TTTTACATATTATTTGTGTACATGATTCCATTTCCATTCCTCACAACAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524810       <-- TTTTACATATTATTTGTGTACATGATTCCATTTCCATTCCTCACAAAAAC
FD551441       <-- .........................................CACAACAAC
EX896423       <-- ..................................................
EX746471       <-- ..................................................
FD940709       <-- ..................................................
EY924535       <-- ..................................................
EY939231       <-- ..................................................
EY925196       <-- ..................................................
EY920172       --> TTTTACATATTATTTGTGTACATGATTCCATTTCCATTCCTCACAACAAC
EV529714       --> TTTTACATATTATTTGTGTACATGATTCCATTTCCATTCCTCACAAAAAC
EX750870       --> TTTTACATATTATTTGTGTACATGATTCCATTTCCATTCCTCACAACAAC
FD936521       --> TTTTACATATTATTTGTGTACATGATTCCATTTCCATTCCTCACAACAAC
EX900352       --> TTTTACATATTATTTGTGTACATGATTCCATTTCCATTCCTCACAACAAC

               151    -    201
UN10545        --> ATTAAAAAAAAAAA---GATAATCCTATTTCACATTTGAGCATTCATTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524810       <-- ATTAAAAAAAAAAA---GATAATCCTATTTCACATTTGAGCATTCATTTT
FD551441       <-- ATTAAAAAAAAAAA--AGATAATCCTATTTCACATTTGAGCATTCATTTT
EX896423       <-- ....AAAAAAAAAA---GATAATC-TATTTCACATT-GAGCATTCATTTT
EX746471       <-- ............AA---GATAATC-TA-TTCACATT-GAGCAT-CATTTT
FD940709       <-- ...................agatatctaTTCACATT-GAGCAT-CATTT-
EY924535       <-- ......................................AGCATTCATTT-
EY939231       <-- ..................................................
EY925196       <-- ..................................................
EY920172       --> ATTAAAAAAAAAA----GATAATCCTATTTCACATTTGAGCATTCATTTT
EV529714       --> ATTAAAAAAAAAAA---GATAATCCTATTTCACATTTGAGCATTCATTTT
EX750870       --> ATTAAAAAAAAAA----GATAATCCTATTTCACATTTGAGCATTCATTTT
FD936521       --> ATTAAAAAAAAAA----GATAATCCTATTTCACATTTGAGCATTCATTTT
EX900352       --> ATTAAAAAAAAAAAAAAGATAATCCTATTTCACATTTGAGCATTCATTTT

               201    -    251
UN10545        --> ACTTGTTGCTTAAGACATCACTTAACCACGAATCGGATCTCACGATCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524810       <-- ACTTGTTGCTTAAGACATCACTTAACCACGAATCGGATCTCACGATCTTT
FD551441       <-- ACTTGTTGCTTAAGACATCACTTAACCACGAATCGGATCTCACGATCTTT
EX896423       <-- ACT-G-TGCATAAGACATCACTTGACCACGAATCGGATCTCACGATCTTT
EX746471       <-- ACTTGTTGCTTAAGACATCACTTAACCACGAATCGGATCTCACGATCTTT
FD940709       <-- AC-TG-TGCTTAAGACATCATTTAACCACGAATCGGATCTCACGATCTTT
EY924535       <-- ACTTGTTGCTTAAGACATCACTTAACCACGAATCGGATCTCACGATCTTT
EY939231       <-- .CTTGT-GCTTAAGACATCACTTGACCACGAATCGGATCTCACGATCTTT
EY925196       <-- ..................................................
EY920172       --> ACTTGTTGCTTAAGACATCACTTAACCACGAATCGGATCTCACGATCTTT
EV529714       --> ACTTGTTGCTTAAGACATCACTTAACCACGAATCGGATCTCACGATCTTT
EX750870       --> ACTTGTTGCTTAAGACATCACTTAACCACGAATCGGATCTCACGATCTTT
FD936521       --> ACTTGTTGCTTAAGACATCATTTAACCACGAATCGGATCTCACGATCTTT
EX900352       --> ACTTGTTGCATAAGACATCACTTGACCACGAATCGGATCTCACGATCTTT

               251    -    301
UN10545        --> AGCTTTTTTTCTTGAACTCCATCGAAGGTGGATATCAATCCTTGAGCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524810       <-- AGCTTTTTTTCTTGAACTCCATCGAAGGTGGATATCAATCCTTGAGCTTT
FD551441       <-- AGCTTTTTT-CTTGAACTCCATCGAAGGTGGATATCAATCCTTGAGCTTT
EX896423       <-- AGCTTTTTT-CTTGAACTCCATCGAAGGTGGATATCAATCCTTGAGCTTT
EX746471       <-- AGCTTTTTT-CTTGAACTCCATCGAAGGTGGATATCAATCCTTGAGCTTT
FD940709       <-- AGCTTTTTT-CTTGAACTCCATCGAAGGTGGATATCAATCCTTGAGCTTT
EY924535       <-- AGCTTTTTT-CTTGAACTCCATCGAAGGTGGATATCAATCCTTGAGCTTT
EY939231       <-- AGCTTTTTT-CTTGAACTCCATCGAAGGTGGATATCAATCCTTGAGCTTT
EY925196       <-- .........TCTTGAACTCCATCGAAGGTGGATATCAATCCTTGAGCTTT
EY920172       --> AGCTTTTTTTCTTGAACTCCATCGAAGGTGGATATCAATCCTTGAGCTTT
EV529714       --> AGCTTTTTTTCTTGAACTCCATCGAAGGTGGATATCAATCCTTGAGCTTT
EX750870       --> AGCTTTTTTTCTTGAACTCCATCGAAGGGGGATATCAATCCTTGAGCTTT
FD936521       --> AGCTTTTTTTCTTGAACTCCATCGAAGGTGGATATCAATCCTTGAGCTTT
EX900352       --> AGCTTTTTTTCTTGAACTCCATCGAAGGTGGATATCAATCCTTGAGCTTT

               301    -    351
UN10545        --> CTTCTTCATTTTCCTCTGAAGATCCGTCTGTTGCTTCGAGTATATTTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524810       <-- CTTCTTTATTTTCCTCTGAAGATCCGTCTGTTGCTTCGAGTATATTTTGA  Raphanus raphanistrum subsp. maritimus
FD551441       <-- CTTCTTTATTTTCCTCTGAAGATCCGTCTGTTGCTTCGAGTATATTTTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX896423       <-- CTTCTTCATTTTCCTCTGAAGGTCCGTCTGTTGCTTCGAGTATATTTTGA  Raphanus sativus cv Early Scarlet Globe
EX746471       <-- CTTCTTTATTTTCCTCTGAAGATCCGTCTGTTGCTTCGAGTATATTTTGA  Raphanus raphanistrum subsp. maritimus
FD940709       <-- CTTCTTCATTTTCCTCTGAAGATCCGTCTGTTGCTTTGAGTATATTTTGA  Raphanus sativus var. oleiformis
EY924535       <-- CTTTTTCATTTTCCTCTGA-GATCCGTCTGTTGCTTCGAGTATATTTTGA  Raphanus raphanistrum subsp. landra
EY939231       <-- CTTCTCCATTTTCCTCTGAAGATCCGTCTGTTGCTTCGAGTATATTTTGA  Raphanus sativus cv Early Scarlet Globe
EY925196       <-- CTTTTTCATTTTCCTCTGA-GATCCGTCTGTTGCTTCGAGTATATTTTGA  Raphanus raphanistrum subsp. landra
EY920172       --> CTTTTTCATTTTCCTCTGA-GATCCGTCTGTTGCTTCGAGTATATTTTGA  Raphanus raphanistrum subsp. landra
EV529714       --> CTTCTTTATTTTCCTCTGAAGATCCGTCTGTTGCTTCGAGTATATTTTGA  Raphanus raphanistrum subsp. maritimus
EX750870       --> CTTCTTTATTTTCCTCTGAAGATCCGTCTGTTGCTTCGAGTATATTTTGA  Raphanus raphanistrum subsp. maritimus
FD936521       --> CTTCTTCATTTTCCTCTGAAGATCCGTCTGTTGCTTTGAGTATATTTTGA  Raphanus sativus var. oleiformis
EX900352       --> CTTCTTCATTTTCCTCTGAAGGTCCGTCTGTTGCTTCGAGTATATTTTGA  Raphanus sativus cv Early Scarlet Globe

               351    -    401
UN10545        --> TTACTAGTTTGTGATATCACTGGTGATGTGCTATCATTGCTCTTGAAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524810       <-- TTACTAGTTTGTGATATCACTGGTGATGTGCTATCATTGCTCTTGAAACA
FD551441       <-- TTACTAGTTTGTGATATCACTGGTGATGTGCTATCATTGCTCTTGAAACA
EX896423       <-- TTACTAGTTTGTGATATCACTGGTGATGTGCTATCATTGCTCTTGAAAGA
EX746471       <-- TTACTAGTTTGTGATATCACTGGTGATGTGCTATCATTGCTCTTGAAACA
FD940709       <-- TTACTAGTTTGTGATATCACTGGTGATGTGCTATCATTGCTCTTGAAACA
EY924535       <-- TTACTAGTTTGTGATATCACTGGTGATGTGCTATCATTGCTCTTGAAACA
EY939231       <-- TTACTAGTTTGTGATATCACTGGTGATGCGCTATCATTGCTCTTGAAAGA
EY925196       <-- TTACTAGTTTGTGATATCACTGGTGATGTGCTATCATTGCTCTTGAAACA
EY920172       --> TTACTAGTTTGTGATATCACTGGTGATGTGCTATCATTGCTCTTGAAACA
EV529714       --> TTACTAGTTTGTGATATCACTGGTGATGTGCTATCATTGCTCTTGAAACA
EX750870       --> TTACTAGTTTGTGATATCACTGGTGATGTGCTATCATTGCTCTTGAAACA
FD936521       --> TTACTAGTTTGTGATATCACTGGTGATGTGCTATCATTGCTCTTGAAACA
EX900352       --> TTACTAGTTTGTGATATCACTGGTGATGTGCTATCATTGCTCTTGAAAGA

               401    -    451
UN10545        --> GTTACAATCAGTTGGTTGACACGTGATCTTGTCGAGTTTAGTGTTCATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524810       <-- GTTACAATCAGTTGGc..................................
FD551441       <-- GTTACAATCAGTTGGTTGACACGTGATCTTGTCGAGTTTAGTGTTCGTTT
EX896423       <-- GTTACAATCAGTTGGTTGACGCGTGATCTTGTCGAGTTTAGTGTTCATTT
EX746471       <-- GTTACAATCAGTTGGTTGACACGTGATCTTGTCGAGTTTAGTGTTCATTT
FD940709       <-- GTTACAATCAGTTGGTTGACACGTGATCTTGTCGAGTTTAGTGTTCATTT
EY924535       <-- GTTACAATCAGTTGGTTGACACGTGATCTTGTCGAGTTTAGTGTTCATTT
EY939231       <-- GTTACAATCAGTTGGTTGACACGTGATCTTGTCGAGTTTAGTGTTCATTT
EY925196       <-- GTTACAATCAGTTGGTTGACACGTGATCTTGTCGAGTTTAGTGTTCATTT
EY920172       --> GTTACAATCAGTTGGTTGACACGTGATCTTGTCGAGTTTAGTGTTCATTT
EV529714       --> GTTACAATCAGTTGGc..................................
EX750870       --> GTTACAATCAGTTGGTTGACACGTGATCTTGTCGAGTTTAGTGTTCATTT
FD936521       --> GTTACAATCAGTTGGTTGACACGTGATCTTGTCGAGTTTAGTGTTCATTT
EX900352       --> GTTACAATCAGTTGGTTGACGCGTGATCTTGTCGAGTTTAGTGTTCATTT

               451    -    501
UN10545        --> CAGACATCTTGGCCATGAGTTCTTTGATATCTAGACATTGGTCGACTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524810       <-- ..................................................
FD551441       <-- CAGACATCTTGGCCATGAGTTCTTTGATATCTAGACATTGGTCGACTTGA
EX896423       <-- CAGACATCTTGGCCATGAGTTCTTTGATATCTAGACATTGGTCGACTTGA
EX746471       <-- CAGACATCTTGGCCATGAGTTCTTTGATATCTAGACATTGGTCGACTTGA
FD940709       <-- CAGACATCTTGGCCATGAGTTCTTTGATATCTAGACATTGGTCGACTTGA
EY924535       <-- CAGACATCTTGGCCATGAGTTCTTTGATATCTAGACATTGGTCGACTTGA
EY939231       <-- CAGACATCTTGGCCATGAGTTCTTTGATATCTAGACATTGGTCGACTTGA
EY925196       <-- CAGACATCTTGGCCATGAGTTCTTTGATATCTAGACATTGGTCGACTTGA
EY920172       --> CAGACATCTTGGCCATGAGTTCTTTGATATCTAGACATTGGTCGACTTGA
EV529714       --> ..................................................
EX750870       --> CAGACATCTTGGCCATGAGTTCTTTGATATCTAGACATTGGTCGACTTGA
FD936521       --> CAAACATCTTGGCCATGAGTTCTTTGATATCTAGACATTGGTCGACTTGA
EX900352       --> CAAACATCTTGGCCATGAGTTCTTTGATATCTAGACATTGGTCGACTTGA

               501    -    551
UN10545        --> ACATCCACATCTACCATCCATCTTAATGAAGCTTCTAACTCTTTGATTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524810       <-- ..................................................
FD551441       <-- ACATCCACATCTACCATCCATCTTAATGAAGCTTCTAACTCTTTGATTCT
EX896423       <-- ACATCCACATCTACCATCCATCTTAATGAAGCTTCTAACTCTTCGATTCT
EX746471       <-- ACATCCACATCTACCATCCATCTTAATGAAGCTTCTAACTCTTTGATTCT
FD940709       <-- ACATCCACATCTACCATCCATCTTAATGAAGCTTCTAACTCTTTGATTCT
EY924535       <-- ACATCCACATCTAACATCCATCTTAATGAAGCTTCTAACTCTTTGATTCT
EY939231       <-- ACATCCACATCTACCATCCATCTTAATGAAGCTTCTAACTCTTTGATTCT
EY925196       <-- ACATCCACATCTAACATCCATCTTAATGAAGCTTCTAACTCTTTGATTCT
EY920172       --> ACATCCACATCTAACATCCATCTTAATGAAGCTTCTAACTCTTTGATTCT
EV529714       --> ..................................................
EX750870       --> ACATCCACATCTACCATCCATCTTAATGAAGCTTCTAACTCTTTGATTCT
FD936521       --> ACATCCACATCTACCATCCATCTTAATGAAGCTTCTAACTCTTTGATTCT
EX900352       --> ACATCCACATCTACCATCCATCTTAATGAAGCTTCTAACTCTTCGATTCT

               551    -    601
UN10545        --> ACTCTTGTACCTATGCTTCTTGTGTAGGTTTCTCCGTCTGAGTTCTGCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524810       <-- ..................................................
FD551441       <-- ACTCTTGTACCTATGCTTCTTGTGTAGGTTTCTCCGTCTGAGTTCTGCAT
EX896423       <-- ACTCTTGTACCTATGCTTCTTGTGTAGGTTTCTCCGTCTGAGTTCTGCAT
EX746471       <-- ACTCTTGTACCTATGCTTCTTGTGTAGGTTTCTCCGTCTGAGTTCTGCAT
FD940709       <-- ACTCTTGTACCTATGCTTCTTGTGTAGGTTTCTCCGTCTGAGTTCTGCAT
EY924535       <-- AATCTTGTACCTATGCTTCTTGTGTAGGTTTCTCCGTCTGAGTTCTGCAT
EY939231       <-- ACTCTTGTACCTATGCCTCTTGTGTAGGTTTCTCCGTCTGAGTTCTGCAT
EY925196       <-- AATCTTGTACCTATGCTTCTTGTGTAGGTTTCTCCGTCTGAGTTCTGCAT
EY920172       --> AATCTTGTACCTATGCTTCTTGTGTAGGTTTCTCCGTCTGAGTTCTGCAT
EV529714       --> ..................................................
EX750870       --> ACTCTTGTACCTATGCTTCTTGTGTAGGTTTCTCCGTCTGAGTTCTGCAT
FD936521       --> ACTCTTGTACCTATGCTTCTTGTGTAGGTTTCTCCGTCTGAGTTCTGCAT
EX900352       --> ACTCTTGTACCTATGCTTCTTGTGTAGGTTTCTCCGTCTGAGTTCTGCAT

               601    -    651
UN10545        --> AAGCCTCAACAAGAAAAACAGCCTTTTCAAGAAGACGCTTGAGATCTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524810       <-- ..................................................
FD551441       <-- AAGCCTCAACAAGAAAAATAGCCTTTTCAAGAAGACGCTTGAGATCTTCA
EX896423       <-- AAGCCTCAACAAGAAAAACAGTCTTTTCAAGAAGACGCTTGAGATCTTCA
EX746471       <-- AAGCCTCAACAAGAAAAATAGCCTTTTCAAGAAGACGCTTGAGATCTTCA
FD940709       <-- AGGCCTCAACAAGAAAAACAGCCTTTTCAAGAAGACGCTTGAGATCTTCA
EY924535       <-- AAGCCTCAACAAGAAAAACAGCCTTTTCAAGAAGACGCTTGAGATCTTCA
EY939231       <-- AAGCCTCAACAAGAAAAACAGCCTTTTCAAGAAGACGCTTGAGATCTTCA
EY925196       <-- AAGCCTCAACAAGAAAAACAGCCTTTTCAAGAAGACGCTTGAGATCTTCA
EY920172       --> AAGCCTCAACAAGAAAAACAGCCTTTTCAAGAAGACGCTTGAGATCTTCA
EV529714       --> ..................................................
EX750870       --> AAGCCTCAACAAGAAAAATAGCCTTTTCAAGAAGACGCTTGAGATCTTCA
FD936521       --> AGGCCTCAACAAGAAAAACAGCCTTTTCAAGAAGACGCTTGAGATCTTCA
EX900352       --> AAGCCTCAACAAGAAAAACAGTCTTTTCAAGAAGACGCTTGAGATCTTCA

               651    -    701
UN10545        --> ATGACTTTCCTCTGAGAATATTCTACTTTTTCGCTGATCTTATCGACATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524810       <-- ..................................................
FD551441       <-- ATGACTTTCCTCTGAGAATATTCTACTTTTTCGCTGATCTTATCGACATG
EX896423       <-- ATGACTTTCCTCT-AGAATATTCTACTTTTTCGCTGATCTTATCGACATG
EX746471       <-- ATGACTTTCCTCTGAGAATATTCTACTTTTTCGCTGATCTTATCGACATG
FD940709       <-- ATGACTTTCCTCTGAGAATATTCTACTTTTTCGCTGATCTTATCGACATG
EY924535       <-- ATGACTTTCCTCTGAGAATATTCTACTTTTTCGCTGATCTTATCGACATG
EY939231       <-- ATGACTTTCCTCTGAGAATATTCTACTTTTTCGCTGATCTTATCGACATG
EY925196       <-- ATGACTTTCCTCTGAGAATATTCTACTTTTTCGCTGATCTTATCGACATG
EY920172       --> ATGACTTTCCTCTGAGAATATTCTACTTTTTCGCTGATCTTATCGACATG
EV529714       --> ..................................................
EX750870       --> ATGACTTTCCTCTGAGAATATTCTACTTTTTCGCTGATCTTATCGACATG
FD936521       --> ATGACTTTCCTCTGA...................................
EX900352       --> ATGACTTTCCTCT-AGAATATTCTACTTTTTCGCTGATCTTATCGACATG

               701    -    751
UN10545        --> AACCACCAAGGGAGTGATCCTGGAGATTGTAGCCCCGAGGCGGTCCAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524810       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD551441       <-- AACCACCAAGGGAGTGATCCTGGAGATTGTAGCCCCGAGGCGGTCCAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX896423       <-- AACCACCAAGGGAGTGATCCTGGAGATTGTAGCCCCGAGGCGGTCCAAGA  Raphanus sativus cv Early Scarlet Globe
EX746471       <-- AACCACCAAGGGAGTGATCCTGGAGATTGTAGCCCCGAGGCGGTCCAAGA  Raphanus raphanistrum subsp. maritimus
FD940709       <-- AACCACCAAGGGAGTGATCCTGGAGATTGTAGCCCCGAGGTGGTCCAAGA  Raphanus sativus var. oleiformis
EY924535       <-- AACCACCAAGGGAGTGATCCTGGAGATTGTAGCCCCGAGGCGGTCCAAGA  Raphanus raphanistrum subsp. landra
EY939231       <-- AACCACCAAGGGAGTGATCCTGGAGATTGTAGCCCCGAGGCGGTCCAAGA  Raphanus sativus cv Early Scarlet Globe
EY925196       <-- AACCACCAAGGGAGTGATCCTGGAGATTGTAGCCCCGAGGCGGTCCAAGA  Raphanus raphanistrum subsp. landra
EY920172       --> AACCACCAAGGGAGTGATCCTGGAGATTGTAGCCC...............  Raphanus raphanistrum subsp. landra
EV529714       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX750870       --> AACCACCAAGGGAGTGATCCTGGAGATTGTAGCCCCGAGGCGGTCCAAGA  Raphanus raphanistrum subsp. maritimus
FD936521       --> ..................................................  Raphanus sativus var. oleiformis
EX900352       --> AACCACCAAGGGAGTGATCCTGGAGATTGTAGCCC...............  Raphanus sativus cv Early Scarlet Globe

               751    -    801
UN10545        --> AACATTTTGTGGCTAAAGATTTATCTTTTGCTTTTATGATGGCTTCATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524810       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD551441       <-- TACATTTTGTGGCTAAAGATTTATCTTTTGCTTTTATGATGGCTTCATAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX896423       <-- AACATTTTGTGGCTAAAGATTTATCTTTTGCTTTTATGATGGCTTCATTA  Raphanus sativus cv Early Scarlet Globe
EX746471       <-- TACATTTTGTGGCTAAAGATTTATCTTTTGCTTTTATGATGGCTTCATAA  Raphanus raphanistrum subsp. maritimus
FD940709       <-- AACATTTTGTGGCTAAAGATTTATCTTTTGCTTTTATGATGGCTTCATAA  Raphanus sativus var. oleiformis
EY924535       <-- AACATTTTGTGGCTAAAGATTTATCTTTTGCTTTTATGATGGCTTCATAA  Raphanus raphanistrum subsp. landra
EY939231       <-- AACATTTTGTGGCTAAAGATTTATCTTTTGCTTTTATGATGGCTTCATAA  Raphanus sativus cv Early Scarlet Globe
EY925196       <-- AACATTTTGTGGCTAAAGATTTATCTTTTGCTTTTATGATGGCTTCATAA  Raphanus raphanistrum subsp. landra
EY920172       --> ..................................................  Raphanus raphanistrum subsp. landra
EV529714       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX750870       --> TACATTTTGTGGCTAAAGATTTATCTTTTGCTTTTATGATGGCTTCATAA  Raphanus raphanistrum subsp. maritimus
FD936521       --> ..................................................  Raphanus sativus var. oleiformis
EX900352       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               801    -    851
UN10545        --> AGCACTTGGAGAGTAATTCCAAGAGCAGCTCCTATCATAACCTCACCAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524810       <-- ..................................................
FD551441       <-- AGCACTTGGAGAGTAATTCCAAGAGCAGCTCCTATCATAACCTCACCAAT
EX896423       <-- AGCACTTGGAGAGTAATTCCAAGAGCAGCTCCTATCATAACCT.......
EX746471       <-- AGCACTTGGAGAGTAATTCCAAGAGCAGCTCCTATCATAACCTCACCAAT
FD940709       <-- AGCACTTGGAGAGTAATTCCAAGAGCAGCTCCTATCATAACCTCACCAAT
EY924535       <-- AGCACTTGGAGAGTAATTCCAAGAGCAGCTCCTATCATAACCTCACCAAT
EY939231       <-- AGCACTTGGAGAGTAATTCCAAGAGCAGCTCCTATCATAACCTCACCAAT
EY925196       <-- AGCACTTGGAGAGTAATTCCAAGAGCAGCTCCTATCATAACCTCACCAAT
EY920172       --> ..................................................
EV529714       --> ..................................................
EX750870       --> AGCACTTGGAGAGT....................................
FD936521       --> ..................................................
EX900352       --> ..................................................

               851    -    901
UN10545        --> CGGCATTTTCTTGAGAATAATGAGGAGGAGAGAGGAACTAGCTCTTGAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV524810       <-- ..................................................
FD551441       <-- CGGCATTTTCTTGAGAATAATGAGGAGGAGAGAGGAACTAGCTCTTGAGT
EX896423       <-- ..................................................
EX746471       <-- CGGCATTTTCTTGAGAATAATGAGGAGGAGAGAGGAACTAGCTCTTGAGT
FD940709       <-- CGGCATTTTCTTGAGAATAATGAGGAGGAGAGAGGAACTAGCTCTTGAGT
EY924535       <-- CGGCATTTTCTTGAGAATAATGAGGAGGAGAGAGGAACTAGCTCTTGAGT
EY939231       <-- CGGCATTTTCTTGAGAATAATGAGGAGGAGAGAGGAACTAGCTCTTGAGT
EY925196       <-- CGGCATTTTCTTGAGAATAATGAGGAGGAGAGAGGAACTAGCTCTTGAGT
EY920172       --> ..................................................
EV529714       --> ..................................................
EX750870       --> ..................................................
FD936521       --> ..................................................
EX900352       --> ..................................................

               901    -    951
UN10545        --> TGAATGTATGTCC
                   ~~~~~~~~~~~~~
EV524810       <-- .............
FD551441       <-- TGAATGTATGTCC
EX896423       <-- .............
EX746471       <-- TGAATGTATGTC.
FD940709       <-- TGAATGTATGTCC
EY924535       <-- TGAATGTATGTCC
EY939231       <-- TGAATGTATGTCC
EY925196       <-- TGAATGTATGTCC
EY920172       --> .............
EV529714       --> .............
EX750870       --> .............
FD936521       --> .............
EX900352       --> .............