1      -     51
UN10559        --> GGGTAAGCAAAAGATCTGGTTGTTTTATTTCTTATTGTTGACACTCAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY905679       <-- GGGTAAGCAAAAGATCTGGTTGTTTTATTTCTTATTGTTGATACTCAAAT
FD962562       <-- GGGTAAGCAAAAGATCTGGTTGTTTTATTTCTTATTGTTGACACTCAAAT
FD536366       <-- .GGTAAGCAAAAGATCTGGTTGTTTTATTTCTTATTGTTGACACTCAAAT
FD558048       <-- ....AAGCAAAAGATCTGGTTGTTTTATTTCTTATTGTTGACACTCAAAT
HS106834       <-- ....AAGCAAAAGAACTGGTTGTTTTATGTCTTATCGCTGACACTCAAAT
FD948326       <-- ...........AGAACTGGTTGTTTTATTTCTTATTGTTGACACTCAAAT
EX757384       <-- ...........................TTTCTTATTGTTGATACTCAAAT
EX762724       <-- ..........................taTTCTTATTGTTGACACTCAAAT
EW716231       <-- ...............................cTATTGTTGACACTCAAAT
EX756930       <-- .................................ATTGTTGACACTCAAAT
EY909166       <-- ..................................................
EX903746       <-- ..................................................
FD962976       <-- ..................................................
EW735532       <-- ..................................................
EV537801       <-- ..................................................
FD549221       <-- ..................................................
FD979184       <-- ..................................................
EX902929       <-- ..................................................
FD543785       <-- ..................................................
EX760990       --> GGGTAAGCAAAAGATCTGGTTGTTTTATTTCTTATTGTTGATACTCAAAT
EY902057       --> GGGTAAGCAAAAGATCTGGTTGTTTTATTTCTTATTGTTGATACTCAAAT
FD539544       --> GGGTAAGCAAAAGATCTGGTTGTTTTATTTCTTATTGTTGACACTCAAAT
FD531854       --> .GGTAAGCAAAAGATCTGGTTGTTTTATTTCTTATTGTTGACACTCAAAT
FD545305       --> gtGTAAGCAAAAGATCTGGTTGTTTTATTTCTTATTGTTGACACTCAAAT
EY904729       --> ....AAGCAAAAGATCTGGTTGTTTTATTTCTTATTGTTGACACTCAAAT
FD554026       --> ....AAGCAAAAGATCTGGTTGTTTTATTTCTTATTGTTGACACTCAAAT
EW739608       --> .....AGCAAAAGAGCTGGTTGTTTTATTTCTTATTGTTGACACTCAAAT
EY933743       --> ....cAGCAAAAGAACTGGTTGTTTTATTTCTTATTGTTGACACTCAAAT
FD975274       --> .....AGCAAAAGATCTGGTTGTTTTATTTCTTATTGTTGACACTCAAAT

               51     -    101
UN10559        --> GACTTAGCAAGTAAATACATGTTCTGATGTTCATATAGACACACTGTAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY905679       <-- GACTTAGCAAGTAAATACATGTTCTGATGTTCATATAGACACACTGTAGG
FD962562       <-- GACTTAGCAAGTAAATACATGTTCTGATGTTCATATAGACACACTGTAGG
FD536366       <-- GACTTAGCAAGTAAATACATGTTCTGATGTTCATATAGACACACTGTAGG
FD558048       <-- GACTTAGCAAGTAAATACATGTTCTGATGTTCATATAGACACACTGTAGG
HS106834       <-- GACTTAGCAAGTAAATACATGTTCTGATGTTCATATAGACACACTGTAGG
FD948326       <-- GACTTAGCAAGTAAATACATGTTCTGATGTTCATATAGACACACTGTAGG
EX757384       <-- GACTTAGCAAGTAAATACATGTTCTGATGTTCATATAGACACACTGTAGG
EX762724       <-- GACTTAGCAAGTAAATACATGTTCTGATGTTCATATAGACACACTGTAGG
EW716231       <-- GACTTAGCAAGTAAATACATGTTCTGATGTTCATATAGACACACTGTAGG
EX756930       <-- GACTTAGCAAGTAAATACATGTTCTGATGTTCATATAGACACACTGTAGG
EY909166       <-- ..................................................
EX903746       <-- ..................................................
FD962976       <-- ..................................................
EW735532       <-- ..................................................
EV537801       <-- ..................................................
FD549221       <-- ..................................................
FD979184       <-- ..................................................
EX902929       <-- ..................................................
FD543785       <-- ..................................................
EX760990       --> GACTTAGCAAGTAAATACATGTTCTGATGTTCATATAGACACACTGTAGG
EY902057       --> GACTTAGCAAGTAAATACATGTTCTGATGTTCATATAGACACACTGTAGG
FD539544       --> GACTTAGCAAGTAAATACATGTTCTGATGTTCATATAGACACACTGTAGG
FD531854       --> GACTTAGCAAGTAAATACATGTTCTGATGTTCATATAGACACACTGTAGG
FD545305       --> GACTTAACAAGTAAATACATGTTCTGATGTTCATATAGACACACTGTAGG
EY904729       --> GACTTAGCAAGTAAATACATGTTCTGATGTTCATATAGACACACTGTAGG
FD554026       --> GACTTAGCAAGTAAATACATGTTCTGATGTTCATATAGACACACTGTAGG
EW739608       --> GACTTAGCAAGTAAATACATGTTCTGATGTTCATATAGACACACTGTAGG
EY933743       --> GACTTAGCAAGTAAATACATGTTCTGATGTTCATATAGACACACTGTAGG
FD975274       --> GACTTAGCAAGTAAATACATGTTCTGATGTTCATATAGACACACTGTAGG

               101    -    151
UN10559        --> GAACACCCATTCCGGTAAGACCAGGTTCAGAGATGGGCTTCAAAAGCTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY905679       <-- GAACACCCATTCCGGTAAGACCAGGTTCAGAGATGGGCTTCAAAAGCTCG
FD962562       <-- GAACACCCATTCCGGTAAGACCAGGTTCAGAGATGGGCTTCAAAAGCTCG
FD536366       <-- GAACACCCATTCCGGTAAGACCAGGTTCAGAGATGGGCTTCAAAAGCTCG
FD558048       <-- GAACACCCATTCCGGTAAGACCAGGTTCAGAGATGGGCTTCAAAAGCTCG
HS106834       <-- GAACACCCATTCCGGTAAGACCAGGTTCAGAGATGGGCTTCAAAAGCTCG
FD948326       <-- GAACACCCATTCCGGTAAGACCAGGTTCAGAGATGGGCTTCAAAAGCTCG
EX757384       <-- GAACACCCATTCCGGTGAGACCAGGTTCAGAGATGGGCTTCAAAAGCTCG
EX762724       <-- GAACACCCATTCCGGTAAGACCAGGTTCAGAGATGGGCTTCAAAAGCTCG
EW716231       <-- GAACACCCATTCCGGTAAGACCAGGTTCAGAGATGGGCTTCAAAAGCTCG
EX756930       <-- GAACACCCATTCCGGTAAGACCAGGTTCAGAGATGGGCTTCAAAAGCTCG
EY909166       <-- ....................aCAGGT-CAGAGATGG-C-TC-AAAGCTCG
EX903746       <-- ......................AGGTTCAGAGATGGGCTTCAAAAGCTCG
FD962976       <-- ..................................................
EW735532       <-- ..................................................
EV537801       <-- ..................................................
FD549221       <-- ..................................................
FD979184       <-- ..................................................
EX902929       <-- ..................................................
FD543785       <-- ..................................................
EX760990       --> GAACACCCATTCCGGTGAGACCAGGTTCAGAGATGGGCTTCAAAAGCTCG
EY902057       --> GAACACCCATTCCGGTAAGACCAGGTTCAGAGATGGGCTTCAAAAGCTCG
FD539544       --> GAACACCCATTCCGGTAAGACCAGGTTCGGAGATGGGCTTCAAAAGCTCG
FD531854       --> GAACACCCATTCCGGTAAGACCAGGTTCAGAGATGGGCTTCAAAAGCTCG
FD545305       --> GAACACCCATTCCGGTAAGACCAGGTTCAGAAATGGGCTTCAAAAGCTCG
EY904729       --> GAACACCCATTCCGGTAAGACCAGGTTCAGAGATGGGCTTCAAAAGCTCG
FD554026       --> GAACACCCATTCCGGTAAGACCAGGTTCAGAGATGGGCTTCAAAAGCTCG
EW739608       --> GAACACCCATTCCGGTAAGACCAGGTTCAGAGAGGGGCTTCAAAAGCTCG
EY933743       --> GAACACCCATTCCGGTAAGACCAGGTTCAGAGATGGGCTTCAAAAGCTCG
FD975274       --> GAACACCCATTCCGGTAAGACCAGGTTCAGAGATGGGCTTCAAAAGCTCG

               151    -    201
UN10559        --> TACTTGACAACACCTGCTCCAGCTCTGTTCTTTAGAGAAACATCCACGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY905679       <-- TACTTGACAACACCTGCTCCAGCTCTGTTCTTTAGAGAAACATCCACGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962562       <-- TACTTGACAACACCTGCTCCAGCTCTGTTCTTTAGAGAAACATTCACGTT  Raphanus raphanistrum subsp. maritimus
FD536366       <-- TACTTGACAACACCTGCTCCAGCTCTGTTCTTTAGAGAAACATTCACGTT  Raphanus raphanistrum subsp. maritimus
FD558048       <-- TACTTGACAACACCTGCTCCAGCTCTGTTCTTTGGAGAAACATTCACGTT  Raphanus raphanistrum subsp. landra
HS106834       <-- TACTTGACAACACCTGCTCCAGCTCTGTTCTTTAGAGAAACATTCACGTT  Raphanus sativus var. niger
FD948326       <-- TACTTGACAACACCTGCTCCAGCTCTGTTCTTTAGAGAAACATTCACGTT  Raphanus sativus cv Early Scarlet Globe
EX757384       <-- TACTTGACAACACCTGCTCCAGCTCTGTTCTTTAGAGAAACATCCACGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX762724       <-- TACTTGACAACACCTGCTCCAGCTCTGTTCTTTAGAGAAACATCCACGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW716231       <-- TACTTGACAACACCTGCTCCAGCTCTGTTCTTTAGAGAAACATTCACGTT  Raphanus sativus var. oleiformis
EX756930       <-- TACTTGACAACACCTGCTCCAGCTCTGTTCTTTAGAGAAACATCCACGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909166       <-- TACTTGACA-CA-CTGCTCCAGCTCTGT-CTTTAGAGAAACATCCACGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX903746       <-- TACTTGACAACAC-TGCTCCAGCTCTGTTCTTTAGAGAAACATTCACGTT  Raphanus sativus cv Rat-Tail Radish #3870
FD962976       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW735532       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV537801       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549221       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979184       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX902929       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD543785       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760990       --> TACTTGACAACACCTGCTCCAGCTCTGTTCTTTAGAGAAACATCCACGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902057       --> TACTTGACAACACCTGCTCCAGCTCTGTTCTTTAGAGAAACATCCACGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539544       --> TACTTGACAACACCTGCTCCAGCTCTGTTCTTTAGAGAAACATCCACGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD531854       --> TACTTGACAACACCTGCTCCAGCTCTGTTCTTTAGAGAAACATTCACGTT  Raphanus raphanistrum subsp. maritimus
FD545305       --> TACTTGACAACACCTGCTCCAGCTCTGTTCTTTAGAGAAACATCCACGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY904729       --> TACTTGACAACACCTGCTCCAGCTCTGTTCTTTAGAGAAACATCCACGTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD554026       --> TACTTGACAACACCTGCTCCAGCTCTGTTCTTTGGAGAAACATTCACGTT  Raphanus raphanistrum subsp. landra
EW739608       --> TACTTGACAACACCTGCTCCAGCTCTGTTCTTTAGAGAAACATCCACGTT  Raphanus sativus cv Rat-Tail Radish #3870
EY933743       --> TACTTGACAACACCTGCTCCAGCTCTGTTCTTTAGAGAAACATTCACGTT  Raphanus sativus cv Early Scarlet Globe
FD975274       --> TACTTGACAACACCTGCTCCAGCTCTGTTCTTTAGAGAAACATCCACGTT  Raphanus raphanistrum subsp. raphanistrum (NY)

               201    -    251
UN10559        --> CCTCTCATCTATTACGCCTTCTAGATATTGGAGCCTGCCTTTGAATTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY905679       <-- CCTCTCATCTATTACGCCTTCTAGATATTGGAGCCTGCCTTTGAATTTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962562       <-- CCTCTCATCTATCACACCTTCTAGATATTGGAGCCTGCCTTTGAATCGTT  Raphanus raphanistrum subsp. maritimus
FD536366       <-- CCTCTCATCTATCACACCTTCTAGATATTGGAGCCTGCCTTTGAATCGTT  Raphanus raphanistrum subsp. maritimus
FD558048       <-- CCTCTCATCTATCACACCTTCTAGATATTGGAGCCTGCCTTTGAATCGTT  Raphanus raphanistrum subsp. landra
HS106834       <-- CCTCTCATCTATCACACCTTCTAGATATTGGAGCCTGCCTTTGAATCGTT  Raphanus sativus var. niger
FD948326       <-- CCTCTCATCTATCACACCTTCTAGATATTGGAGCCTGCCTTTGAATCGTT  Raphanus sativus cv Early Scarlet Globe
EX757384       <-- CCTCTCATCTATTACGCCTTCTAGATATTGGAGCCTGCCTTTGAATTTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX762724       <-- CCTCTCATCTATTACGCCTTCTAGATATTGGAGCCTGCCTTTGAATTTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW716231       <-- CCTCTCATCTATCACACCTTCTAGATATTGGAGCCTGCCTTTGAATCGTT  Raphanus sativus var. oleiformis
EX756930       <-- CCTCTCATCTATTACGCCTTCTAGATATTGGAGCCTGCCTTTGAATTTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909166       <-- CCTCTCATCTATTACGC-TTCTAGATATTGGAGCCTGCCTTTGAATTTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX903746       <-- CCTCTCATCTATCACACCTTCTAGATATTGGAGCCTGCCTTTGAATCGTT  Raphanus sativus cv Rat-Tail Radish #3870
FD962976       <-- ............................................atcgTT  Raphanus raphanistrum subsp. maritimus
EW735532       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EV537801       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549221       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979184       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX902929       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD543785       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760990       --> CCTCTCATCTATTACGCCTTCTAGATATTGGAGCCTGCCTTTGAATTTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902057       --> CCTCTCATCTATTACGCCTTCTAGATATTGGAGCCTGCCTTTGAATTTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539544       --> CCTCTCATCTATTACGCCTTCTAGATATTGGAGCCTGCCTTTGAATTTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD531854       --> CCTCTCATCTATCACACCTTCTAGATATTGGAGCCTGCCTTTGAATCGTT  Raphanus raphanistrum subsp. maritimus
FD545305       --> CCTCTCATCTATTACGCCTTCTAGATATTGGAGCCTGCCTTTGAATTTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY904729       --> CCTCTCATCTATTACGCCTTCTAGATATTGGAGCCTGCCTTTGAATTTTT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD554026       --> CCTCTCATCTATCACACCTTCTAGATATTGGAGCCTGCCTTTGAATCGTT  Raphanus raphanistrum subsp. landra
EW739608       --> CCTCTCATCTATTACGCCTTCTAGATATTGGAGCCTGCCTTTGAATTTTT  Raphanus sativus cv Rat-Tail Radish #3870
EY933743       --> CCTCTCATCTATCACACCTTCTAGATATTGGAGCCTGCCTTTGAATCGTT  Raphanus sativus cv Early Scarlet Globe
FD975274       --> CCTCTCATCTATTACGCCTTCTAGATATTGGAGCCTGCCTTTGAATTTTT  Raphanus raphanistrum subsp. raphanistrum (NY)

               251    -    301
UN10559        --> CATATGCAGCAAAGATGACAGGTTCGTCTATCCAAGATGCTTCTGGCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY905679       <-- CACATGCAGCAAAGATGACAGGTTCGTCTATCCAAGATGCTTCTGGCTCT
FD962562       <-- CATATGCAGCAAAGATGACAGGTTCGTCTATCCAAGATGCTTCTGGCTCT
FD536366       <-- CATATGCAGCAAAGATGACAGGTTCGTCTATCCAAGATGCTTCTGGCTCT
FD558048       <-- CATATGCAGCAAAGATGACAGGTTCGTCTATCCAAGATGCTTCTGGCTCT
HS106834       <-- CATATGCAGCAAAGATGACAGGTTCGTCTATCCAAGATGCTTCTGGCTCT
FD948326       <-- CATATGCAGCAAAGATGACAGGTTCGTCTATCCAAGATGCTTCTGGCTCT
EX757384       <-- CATATGCAGCAAAGATGACAGGTTCGTCTATCCAAGATGCTTCTGGCTCT
EX762724       <-- CATATGCAGCAAAGATGACAGGTTCGTCTATCCAAGATGCTTCTGGCTCT
EW716231       <-- CATATGCAGCAAAGATGACAGGTTCGTCTATCCAAGATGCTTCTGGCTCT
EX756930       <-- CATATGCAGCAAAGATGACAGGTTCGTCTATCCAAGATGCTTCTGGCTCT
EY909166       <-- CATATGCAGCAAAGATGACAGGTTCGTCTATCCAAGATGCTTCTGGCTCT
EX903746       <-- CATATGCAGCAAAGATGACAGGTTCGTCTATCCAAGATGCTTCTGGCTCT
FD962976       <-- CATATGCAGCAAAGATGACAGGTTCGTCTATCCAAGATGCTTCTGGCTCT
EW735532       <-- CATATGCAGCAAAGATGACAGGTTCGTCTATCCAAGATGCTTCTGGCTCT
EV537801       <-- .........................................TCTGGCTCT
FD549221       <-- ..........................................CTGGCTCT
FD979184       <-- ................................................CT
EX902929       <-- ..................................................
FD543785       <-- ..................................................
EX760990       --> CATATGCAGCAAAGATGACAGGTTCGTCTATCCAAGATGCTTCTGGCTCT
EY902057       --> CACATGCAGCAAAGATGACAGGTTCGTCTATCCAAGATGCTTCTGGCTCT
FD539544       --> CATATGCAGCAAAGATGACAGGTTCGTCTATCCAAGATGCTTCTGGCTCT
FD531854       --> CATATGCAGCAAAGATGACAGGTTCGTCTATCCAAGATGCTTCTGGCTCT
FD545305       --> CATATGCAGCAAAAATGACAGGTTCGTCTATCCAAGATGCTTCTGGCTCT
EY904729       --> CATATGCAGCAAAAATGACAGGTTCGTCTATCCAAAATGCTTCTGGCTCT
FD554026       --> CATATGCAGCAAAAATGACAGGTTCGTCTATCCAAGATGCTTCTGGCTCT
EW739608       --> CATATGCAGCAAAGATGACAGGTTCGTCTATCCAAGATGCTTCTGGCTCT
EY933743       --> CATATGCAGCAAAGATGACAGGTTCGTCTATCCAAGATGCTTCTGGCTCT
FD975274       --> CATATGCAGCAAAGATGACAGGTTCGTCTATCCAAGATGCTTCTGGCTCT

               301    -    351
UN10559        --> TCTCCCAAGTACTCTTCGTCTGGTGAATGGGTCGATAGTAGATCCAGAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY905679       <-- TCTCCCAAGTACTCTTCGTCTGc...........................
FD962562       <-- TCTCCCAAGTACTCTTCGTCTGGTGAATGGGTCGATAGTAGATCCc....
FD536366       <-- TCTCCCAAGTACTCTTCGTCTGGTGAATGGGTCGAT..............
FD558048       <-- TCTCCCAAGTACTCTTCGTCTGGTGAATGGGTCGACAGTAGATCCAGAGT
HS106834       <-- TCTCCCAAGTACTCTTCGTCTGGTGAATGGGTCGATAGTAGATCCAGAGT
FD948326       <-- TCTCCCAAGTACTCTTCGTCTGGTGAATGGGTCGATAGTAGATCCAGAGT
EX757384       <-- TCTCCCAAGTACTCTTCGTCTGGTGAATGGGTCGATAGTAGATCCAGAGT
EX762724       <-- TCTCCCAAGTACTCTTCGTCTGGTGAATGGGTCGATAGTAGATCCAGAGT
EW716231       <-- TCTCCCAAGTACTCTTCGTCTGGTGAATGGGTCGATAGTAGATCCAGAAT
EX756930       <-- TCTCCCAAGTACTCTTCGTCTGGTGAATGGGTCGATAGTAGATCCAGAGT
EY909166       <-- TCTCCCAAGTACTCTTCGTCTGGTGAATGGGTCGATAGTAGATCCAGAGT
EX903746       <-- TCTCCCAAGTACTCTTCGTCTGGTGAATGGGTCGATAGTAGATCCAGAGT
FD962976       <-- TCTCCCAAGTACTCTTCGTCTGGTGAATGGGTCGATAGTAGATCCAGAGT
EW735532       <-- TCTCCCAAGTACTCTTCGTCTGGTGAATGGGTCGATAGTAGATCCAGAGT
EV537801       <-- TCTCCCAAGTACTCTTCGTCTGGTGAATGGGTCGATAGTAGATCCAGAGT
FD549221       <-- -CTCCCAAGTACTCTTCGTCTGGTGAATGGGTCGATAGTAGATCCAGAGT
FD979184       <-- TCTCCCAAGTACTCTTCGTCTGGTGAATGGGTCGATAGTAGATCCAGAGT
EX902929       <-- ..................................................
FD543785       <-- ..................................................
EX760990       --> TCTCCCAAGTACTCTTCGTCTGGTGAATGGGTCGATAGTAGATCCAGAGT
EY902057       --> TCTCCCAAGTACTCTTCGTCTGc...........................
FD539544       --> TCTCCCAAGTACTCTTCGTCTGGTGAATGGGTCGATAGTAGATCCAGAGT
FD531854       --> TCTCCCAAGTACTCTTCGTCTGGTGAATGGGTCGATAGTAGATCCAGAG.
FD545305       --> TCTCCCAAGTACTCTTCGTCTGGTGAATGGGTCGATAGTAGATCCAGAGT
EY904729       --> TCTCCCAAGTACTCTTCGTCTGGTGAATGGGTCGATAGTAGATCCAGAGT
FD554026       --> TCTCCCAAGTACTCTTCGTCTGGTGAATGGGTCGACAGTAGATCCAGAGT
EW739608       --> TCTCCCAAGTACTCTTCGTCTGGTGAATGGGTCGATAGTAGATCCAGAGT
EY933743       --> TCTCCCAAGTACTCTTCGTCTGGTGAATGGGTCGATAGTAGATCCAGAGT
FD975274       --> TCTCCCAAGTACTCTTCGTCTGGTGAATGGGTCGATAGTAGATCCAGAGT

               351    -    401
UN10559        --> CACCATCACTTGCGTCGCCTGCTTCCTCGACGGGAATGTCTTGAGCAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY905679       <-- ..................................................
FD962562       <-- ..................................................
FD536366       <-- ..................................................
FD558048       <-- CACCATCACTTGCGTCGCCTGCTTCCTCGACGGGAATGTCTTGAGCAACA
HS106834       <-- CACCATCACTTGCGTCGCCTGCTTCCTCGACGGGAATGTCTTGAGCAACA
FD948326       <-- CACCATCACTTGCGTCGCCTGCTTCCTCGACGGGAATGTCTTGAGCAACA
EX757384       <-- CACCATCACTTGCGTCGCCTGCTTCCTCGACGGGAATGTCTTGAGCAACA
EX762724       <-- CACCATCACTTGCGTCGCCTGCTTCCTCGACGGGAATGTCTTGAGCAACA
EW716231       <-- CACCATCACTTGCGTCGCCTGCTTCCTCGACGGGAATGTCTTGAGCAACA
EX756930       <-- CACCATCACTTGCGTCGCCTGCTTCCTCGACGGGAATGTCTTGAGCAACA
EY909166       <-- CACCGTCACTTGCGTCGCCTGCTTCCTCGACGGGAATGTCTTGAGCAACA
EX903746       <-- CACCATCACTTGCGTCGCCTGCTTCCTCGACGGGAATGTCTTGAGCAACA
FD962976       <-- CACCATCACTTGCGTCGCCTGCTTCCTCGACGGGAATGTCTTGAGCAACA
EW735532       <-- CACCATCACTTGCGTCGCCTGCTTCCTCGACGGGAATGTCTTGAGCAACA
EV537801       <-- CACCATCACTTGCGTCGCCTGCTTCCTCGACGGGAATGTCTTGAGCAACA
FD549221       <-- CACCATCACTTGCGTCGCCTGCTTCCTCGACGGGAATGTCTTGAGCAACA
FD979184       <-- CACCATCACTTGCGTCGCCTGCTTCCTCGACGGGAATGTCTTGAGCAACA
EX902929       <-- ..................................................
FD543785       <-- ..................................................
EX760990       --> CACCATCACTTGCGTCGCCTGCTTCCTCGACGGGAATGTCTTGAGCAACA
EY902057       --> ..................................................
FD539544       --> CACCATCACTTGCGTCGCCTGCTTCCTCGACGGGAATGTCTTGAGCAACA
FD531854       --> ..................................................
FD545305       --> CACCATCACTTGCGTCGCCTGCTTCCTCGACGGGAATGTCTTGAGCAACA
EY904729       --> CACCGTCACTTGCGTCGCCTGCTTCCTCGACGGGAATGTCTTGAGCAACA
FD554026       --> CACCATCACTTGCGTCGCCTGCTTCCTCGACGGGAATGTCTTGAGCAACA
EW739608       --> CACCATCACTTGCGTCGCCTGCTTCCTCGACGGGAATGTCTTGAGCAACA
EY933743       --> CACCATCACTTGCGTCGCCTGCTTCCTCGACGGGAATGTCTTGAGCAACA
FD975274       --> CACCATCACTTGCGTCGCCTGCTTCCTCGACGGGAATGTCTTGAGCAACA

               401    -    451
UN10559        --> CCTTCTCTGGTTCCTCATAGAACTCTTTAAGTTCTTCCTCTGTCGGCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY905679       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962562       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD536366       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD558048       <-- CCTTCTCTGGTTCCTCATAGAACTCTGTAAGCTCTTCCGCTGTCGGCTCT  Raphanus raphanistrum subsp. landra
HS106834       <-- CCTTCTCTGGTTCCTCATAGAACTCTGTAAGCTCTTCCTCTGTCGGCTCT  Raphanus sativus var. niger
FD948326       <-- CCTTCTCTGGTTCCTCATAGAACTCTGTAAGCTCTTCCTCTGTCGGCTCT  Raphanus sativus cv Early Scarlet Globe
EX757384       <-- CCTTCTCTGGTTCCTCATAGAACTCTTTAAGTTCTTCCTCTGTCGGCTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX762724       <-- CCTTCTCTGGTTCCTCATAGAACTCTTTAAGTTCTTCCCCTGTCGGCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW716231       <-- CCTTCTCTGGTTCCTCATAGAACTCTGTAAGCTCTTCCTCTGTCGGCTCT  Raphanus sativus var. oleiformis
EX756930       <-- CCTTCTCTGGTTCCTCATAGAACTCTTTAAGTTCTTCCTCTGTCGGCTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909166       <-- CCTTCTCTGGTTCCTCATAGAACTCTTTAAGTTCTTCCTCTGTCGGCTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX903746       <-- CCTTCTCTGGTTCCTCATAGAACTCTGTAAGCTCTTCCTCTGTCGGCTCT  Raphanus sativus cv Rat-Tail Radish #3870
FD962976       <-- CCTTCTCTGGTTCCTCATAGAACTCTGTAAGCTCTTCCTCTGTCGGCTCT  Raphanus raphanistrum subsp. maritimus
EW735532       <-- CCTTCTCTGGTTCCTCATAGAACTCTTTAAGTTCTTCCTCTGTCGGCTCT  Raphanus sativus cv Rat-Tail Radish #3870
EV537801       <-- CCTTCTCTGGTTCCTCATAGAACTCTTTAAGTTCTTCCTCTGTCGGCTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549221       <-- CCTTCTCTGGTTCCTCATAGAACTCTTTAAGTTCTTCCCCTGTCGGCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979184       <-- CCTTCTCTGGTTCCTCATAGAACTCTTTAAGTTCTTCCCCTGTCGGCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX902929       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD543785       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760990       --> CCTTCTCTGGTTCCTCATAGAACTCTTTAAGTTCTTCCTCTGTCGGCTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902057       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539544       --> CCTTCTCTGGTTCCTCATAAAACTCTTTAAGTTCTTCCTCTGTCGGCTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD531854       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD545305       --> CCTTCTCTGGTTCCTCATAGAACTCTTTAAGTTCTTCCCCTGTCGGCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY904729       --> CCTTCTCTGGTTCCTCATAGAACTCTTTAAGTTCTTCCTCTGTCGGCTCT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD554026       --> CCTTCTCTGGTTCCTCATAGAACTCTGTAAGCTCTTCCGCTGTCGGCTCT  Raphanus raphanistrum subsp. landra
EW739608       --> CCTTCTCTGGTTCCTCATAAAACTCTTTAAGTTCTTCCTCTGTCGGCTCT  Raphanus sativus cv Rat-Tail Radish #3870
EY933743       --> CCTTCTCTGGTTCCTCATAGAACTCTGTAAGCTCTTCCTCTGTCGGCTCT  Raphanus sativus cv Early Scarlet Globe
FD975274       --> CCTTCTCTGGTTCCTCATAAAACTCTTTAAGTTCTTCCCCTGTCGGCTCT  Raphanus raphanistrum subsp. raphanistrum (NY)

               451    -    501
UN10559        --> TCCACTGGCATTTTTATCCTTGTAGTGGTTGGTCGGTTGGGAAAGTACCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY905679       <-- ..................................................
FD962562       <-- ..................................................
FD536366       <-- ..................................................
FD558048       <-- TCCACTGGCGTTTTTATCCTTGTAGTGGTTGGTCGGTTGGGAAAGTACCC
HS106834       <-- TCCACTGGCATTTTTATCCTTGTAGTGGTTGGTCGGTTGGGAAAGTACCC
FD948326       <-- TCCACTGGCATTTTTATCCTTGTAGTGGTTGGTCGGTTGGGAAAGTACCC
EX757384       <-- TCCACTGGCATTTTTATCCTTGTAGTGGTTGGTCGGTTGGGAAAGTACCC
EX762724       <-- TCCACTGGCATTTTTATCCTTGTAGTGGTTGGTCGGTTGGGAAAGTACCC
EW716231       <-- TCCACTGGCATTTTTATCCTTGTAGTGGTTGGTCGGTTGGGAAAGTACCC
EX756930       <-- TCCACTGGCATTTTTATCCTTGTAGTGGTTGGTCGGTTGGGAAAGTACCC
EY909166       <-- TCCACTGGCATTTTTATCCTTGAAGTGGTTGGTCGGTTGGGAAAGTACCC
EX903746       <-- TCCACTGGCATTTTTATCCTTGTAGTGGTTGGTCGGTTGGGAAAGTACCC
FD962976       <-- TCCACTGGCATTTTTATCCTTGTAGTGGTTGGCCGGTTGGGAAAGTACCC
EW735532       <-- TCCACTGGCATTTTTATCCTTGTAGTGGTTGGTCGGTTGGGAAAGTACCC
EV537801       <-- TCCACTGGCATTTTTATCCTTGTAG.........................
FD549221       <-- TCCACTGGCATTTTTATCCTTGTAGTGGTTGGTCGGTTGGGAAAGTACCC
FD979184       <-- TCCACTGGCATTTTTATCCTTGTAGTGGTTGGTCGGTTGGAAAAGTACCC
EX902929       <-- ..................................................
FD543785       <-- ..................................................
EX760990       --> TCCACTGGCATTTTTATCCTTGTAGTGGTTGGTCGGTTGGGAAAGTACCC
EY902057       --> ..................................................
FD539544       --> TCCACTGGCATTTTTATCCTTGTAGTGGTTGGTCGGTTGGGAAAGTACCC
FD531854       --> ..................................................
FD545305       --> TCCACTGGCATTTTTATCCTTGTAGTGGTTGGTCGGTTGGGAAAGTACCC
EY904729       --> TCCACTGGCATTTTTATCCTTGAAGTGGTTGGTCGGTTGGGAAAGTACCC
FD554026       --> TCCACTGGCGTTTTTATCCTTGTAGTGGTTGGTCGGTTGGGAAAGTACCC
EW739608       --> TCCACTGGCATTTTTATCCTTGTAGTGGTTGGTCGGTTGGGAAAGTACCC
EY933743       --> TCCACTGGCATTTTTATCCTTGTAGTGGTTGGTCGGTTGGGAAAGTACCC
FD975274       --> TCCACTGGCATTTTTATCCTTGTAGTGGTTGGTCGGTTGGGAAAGTACCC

               501    -    551
UN10559        --> TCCATACCCGTACTGTCCAAAGTTTACGGCTGCATGGTGACCTGAAGCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY905679       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962562       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD536366       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD558048       <-- TCCATACCCGTACTGTCCAAAGTTTACGGCTGCATGGTGACCTGAAGCCA  Raphanus raphanistrum subsp. landra
HS106834       <-- TCCATACCCGTACTGTCCAAAGTTTACCGCTGCATGGTGACCTGAAGCCA  Raphanus sativus var. niger
FD948326       <-- TCCATACCCGTACTGTCCAAAGTTTACCGCTGCATGGTGACCTGAAGCCA  Raphanus sativus cv Early Scarlet Globe
EX757384       <-- TCCATACCCGTACTGTCCAAAGTTTACGGCTGCATGGTGACCTGAAGCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX762724       <-- TCCATACCCGTACTGTCCAAAGTTTACGGCTGCATGGTGACCTGAAGCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW716231       <-- TCCATACCCGTACTGTCCAAAGTTTGCCGCTGCATGGTGACCTGAAGCCA  Raphanus sativus var. oleiformis
EX756930       <-- TCCATACCCGTACTGTCCAAAGTTTACGGCTGCATGGTGACCTGAAGCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909166       <-- TCCATACCCGTACTGTCCAAAGTTTACGGCTGCATGGTGACCTGAAGCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX903746       <-- TCCATACCCGTACTGTCCAAAGTTTACCGCTGCATGGTGACCTGAAGCCA  Raphanus sativus cv Rat-Tail Radish #3870
FD962976       <-- TCCATACCCGTACTGTCCAAAGTTTACAGCTGCATGGTGACCTGAAGCCA  Raphanus raphanistrum subsp. maritimus
EW735532       <-- TCCATACCCGTACTGTCCAAAGTTTACGGCTGCATGGTGACCTGAAGCCA  Raphanus sativus cv Rat-Tail Radish #3870
EV537801       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549221       <-- TCCATACCCGTACTGTCCAAAGTTTACGGCTGCATGGTGACCTGAAGCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979184       <-- TCCATACCCGTACTGTCAAAAGTTTACGGCTGCATGGTGACCTGAAGCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX902929       <-- .....ACCCGTACTGTCCAAAGTTTACCGCTGCATGGTGAC-TGAAGCCA  Raphanus sativus cv Rat-Tail Radish #3870
FD543785       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760990       --> TCCATACCCGTACTGTCCAAAGTTTACGGCTGCATGGTGACCTGAAGCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902057       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539544       --> TCCATACCCGTACTGTCCAAAGTTTACTGCTGCATGGTGACCTGAAGCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD531854       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD545305       --> TCCATACCCGTACTGTCCAAAGTTTACGGCTGCATGGTGACCTGAAGCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY904729       --> TCCATACCCGTACTGTCCAAAGTTTACGGCTG..................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD554026       --> TCCATACCCGTACTGTCCAAAGTTTACGGCTGCATGGTGACCTGAAGCCA  Raphanus raphanistrum subsp. landra
EW739608       --> TCCATACCCGTACTGTCCAAAGTTTACGGCTGCATGGTGACCTGAAGCCA  Raphanus sativus cv Rat-Tail Radish #3870
EY933743       --> TCCATACCCGTACTGTCCAAAGTTTACCGCTGCATGGTGACCTGAAGCCA  Raphanus sativus cv Early Scarlet Globe
FD975274       --> TCCATACCCGTACTGTCAAAAGTTTACGGCTGCATGGTGACCTGAAGCCA  Raphanus raphanistrum subsp. raphanistrum (NY)

               551    -    601
UN10559        --> CCCACGCAATCGTAGTCACCACGCCAATCAAGTCATCTTGTGTTTTGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY905679       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962562       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD536366       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD558048       <-- CCCACGCAATCGTAGTCACCACGCCAATCAAGTCATCTTGTGTTTTGAGC  Raphanus raphanistrum subsp. landra
HS106834       <-- CCCACGCAATCGTAGTCACCACGCCAATCAAGTCATCTTGTGTTaaaa..  Raphanus sativus var. niger
FD948326       <-- CCCACGCAATCGTAGTCACCACGCCAATCAAGTCATCTTGTGTTTTGAGC  Raphanus sativus cv Early Scarlet Globe
EX757384       <-- CCCACGCGATCGTAGTCACCACGCCAATCAAGTCATCTTGTGTTTTGAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX762724       <-- CCCACGCAATCGTAGTCACCACGCCAATCAAGTCATCTTG-GTTTTGAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW716231       <-- CCCACGCAATCGTAGTCACCACGCCAATCAAGTCATCTTGTGTTTTGAGC  Raphanus sativus var. oleiformis
EX756930       <-- CCCACGCGATCGTAGTCACCACGCCAATCAAGTCATCTTGTGTTTTGAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909166       <-- CCCACGCGATCGTAGTCACCACGCCAATCAAGTCATCTTGTGTTTTGAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX903746       <-- CCCACGCAATCGTAGTCACCACGCCAATCAAGTCATCTTGTGTTTTGAGC  Raphanus sativus cv Rat-Tail Radish #3870
FD962976       <-- CCCACGCAATCGTAGTCACCACGCCAATCAAGTCATCTTGTGTTTTGAGC  Raphanus raphanistrum subsp. maritimus
EW735532       <-- CCCACGCGATCGTAGTCACCACGCCAATCAAGTCATCTTGTGTTTTGAGC  Raphanus sativus cv Rat-Tail Radish #3870
EV537801       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549221       <-- CCCACGCAATCGTAGTCACCACGCCAATCAAGTCATCTTGTGTTTTGAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979184       <-- CCCACGCAATCGTAGTCACCACGCCAATCAAGTCATCTTGTGTTTTGAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX902929       <-- CCCACGCAATCGTAGTCACCACGCCAATCAAGTCATCTTGTGTTT-GAGC  Raphanus sativus cv Rat-Tail Radish #3870
FD543785       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760990       --> CCCACGCGATCGTAGTCACCACGCCAATCAAGTCATCTTGTGTTTTGAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902057       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539544       --> CCCACGCGATCGTAGTCACCACGCCAATCAAGTCATCTTGTGTTTTGAGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD531854       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD545305       --> CCCACGCAATCGTAGTCACCACGCCAATCAAGTCATCTTGTGTTTTGAGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY904729       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD554026       --> CCCACGCAATCGTAGTCACCACGCCAATCAAGTCATCTTGTGTTTTGAGC  Raphanus raphanistrum subsp. landra
EW739608       --> CCCACGCGATCGTAGTCACCACGCCAATCAAGTCATCTTGTGTTTTGAGC  Raphanus sativus cv Rat-Tail Radish #3870
EY933743       --> CCCACGCAATCGTAGTCACCACGCCAA----GTCATCTTGTGTTTTGAGC  Raphanus sativus cv Early Scarlet Globe
FD975274       --> CCCACGCAATCGTAGTCACCACGCCAATCAAGTCATCTTGTGTTTTGAGC  Raphanus raphanistrum subsp. raphanistrum (NY)

               601    -    651
UN10559        --> TCAGGCCACCATGGTTCGTCTTTCTTGTCTCCATGCCCTATGTTCTTCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY905679       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962562       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD536366       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD558048       <-- TCAGGCCACCATGGTTCGTCTTTCTTGTCTCCGTGCCCTATGTTCCTCAC  Raphanus raphanistrum subsp. landra
HS106834       <-- ..................................................  Raphanus sativus var. niger
FD948326       <-- TCAGGCCACCATGGTTCGTCTTTCTTGTCTCCGTGCCCTATGTTCTTCAC  Raphanus sativus cv Early Scarlet Globe
EX757384       <-- TCAGGCCACCATGGTTCGTCTTTCTTGTCTCCATGCCCTATGTTCTTCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX762724       <-- TCAGGCCACCATGGTTCGTCTTTCTTGTCTCCATGCCCAATGTTCTTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW716231       <-- TCAGGCCACCATGGTTCc................................  Raphanus sativus var. oleiformis
EX756930       <-- TCAGGCCACCATGGTTCGTCTTTCTTGTCTCCATGCCCTATGTTCTTCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909166       <-- TCAGGCCACCATGGTTCGTCTTTCTTGTCTCCATGCCCTATGTTCTTCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX903746       <-- TCAGGCCACCATGGTTCGTCTTTCTTGTCTCCGTGCCCTATGTTCTTCAC  Raphanus sativus cv Rat-Tail Radish #3870
FD962976       <-- TCAGGCCACCATGGTTCGTCTTTCTTGTCTCCGTGCCCTATGTTCTTCAC  Raphanus raphanistrum subsp. maritimus
EW735532       <-- TCAGGCCACCATGGTTCGTCTTTCTTGTCTCCATGCCCTATGTTCTTCAC  Raphanus sativus cv Rat-Tail Radish #3870
EV537801       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549221       <-- TCAGGCCACCATGGTTCGTCTTTCTTGTCTCCATGCCCAATGTTCTTCAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979184       <-- TCAGGCCACCATGGTTCGTCTTTCTTGTCTCCATGCCCAATGTTCTTCAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX902929       <-- TCAGGCCACCATGGTTCGTCTTTCTTGTCTCCGTGCCCTATGCTCTTCAC  Raphanus sativus cv Rat-Tail Radish #3870
FD543785       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760990       --> TCAGGCCACCATGGTTCGTCTTTCTTGTCTCCATGCCCTATGTTCTTCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902057       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539544       --> TCAGGCCACCATGGTTCGTCTTTCTTGTCTCCATGCCCTATGTTCTTCAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD531854       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD545305       --> TCAGGCCACCATGGTTCGTCTTTCTTGTCTCCATGCCCAATGTTCT....  Raphanus raphanistrum subsp. raphanistrum (NY)
EY904729       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD554026       --> TCAGGCCACCATGGTTCGTCTTTCTTGTCTCCGTGCCCTATGTTCCTCAC  Raphanus raphanistrum subsp. landra
EW739608       --> TCAGGCCACCATGGTTCGTCTTTCTTGTCTCCATGCCCTATGTTCTTCAC  Raphanus sativus cv Rat-Tail Radish #3870
EY933743       --> TCAGGCCACCATGGTTCGTCTTTCTTGTCTCCGTGCCCTATGTTCTTCAC  Raphanus sativus cv Early Scarlet Globe
FD975274       --> TCAGGCCACCATGGTTCGTCTTTCTTGTCTCCATGCCCAATGTTCTTCAC  Raphanus raphanistrum subsp. raphanistrum (NY)

               651    -    701
UN10559        --> TTCACTCCACCATTCTTGGAGTTCCTCATCCGACACGATCAGTCCTGCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY905679       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD962562       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD536366       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD558048       <-- TTCACTCCACCATTCTTGGAGTTCCTCATCCGACACGATCAGTCCTGCAT  Raphanus raphanistrum subsp. landra
HS106834       <-- ..................................................  Raphanus sativus var. niger
FD948326       <-- TTCACTCCACCATTCTTGGAGTcc..........................  Raphanus sativus cv Early Scarlet Globe
EX757384       <-- TTCACTCCACCATTCTTGGAGTTCCTC.......................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX762724       <-- TTCACTCCACCATGCTTGGAGTTCCTCATCCGACACGATCAGTCCTGCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW716231       <-- ..................................................  Raphanus sativus var. oleiformis
EX756930       <-- TTCACTCCACCATTCTTGGAGTTCC.........................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY909166       <-- TTCACTCCACCATTCTTGGAGTTCCTCATCCGACACGATCAGTCCTGCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX903746       <-- TTCACTCCACCATTCTTGGAGTTCCTCATCCGACACGATCAGTCCTGCAT  Raphanus sativus cv Rat-Tail Radish #3870
FD962976       <-- TTCACTCCACCAACCTTGGAGCTCCTCATCCGACACGATCAGTCCTGCAT  Raphanus raphanistrum subsp. maritimus
EW735532       <-- TTCACTCCACCATTCTTGGAGTTCCTCATCCGACACGATCAGTCCTGCAT  Raphanus sativus cv Rat-Tail Radish #3870
EV537801       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD549221       <-- TTCACTCCACCATGCTTGGAGTTCCTCATCCGACACGATCAGTCCTGCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979184       <-- TTCACTCCACCATGCTTGGAGTTCCTCATCCGACACGATCAGTCCTGCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX902929       <-- TTCACTCCACCATTCTTGGAGTTCCTCATCCGACACGATCAGTCCTGCAT  Raphanus sativus cv Rat-Tail Radish #3870
FD543785       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX760990       --> TTCACTCCACCATTCTTGGAGTTCCTC.......................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902057       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD539544       --> TTCACTCCACCATTCTTGGAGTTCCTCATCCGACACGATCAGTCCTGCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD531854       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD545305       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY904729       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD554026       --> T.................................................  Raphanus raphanistrum subsp. landra
EW739608       --> TTCACTCCACCATTCTTGGAGTTCCTCATCCGACACGATCAGTCCTGCAT  Raphanus sativus cv Rat-Tail Radish #3870
EY933743       --> TTCACTCCACCATTCTTGGAGTTCCTC.......................  Raphanus sativus cv Early Scarlet Globe
FD975274       --> TTCACTCCACCATGCTTGGAGTTCCTCATCCGACACGATCAGTCCTGCAT  Raphanus raphanistrum subsp. raphanistrum (NY)

               701    -    751
UN10559        --> CTGGATAATAGTGCTTCACATAGTCTGTGACCCATTCCTTTAGTGCATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY905679       <-- ..................................................
FD962562       <-- ..................................................
FD536366       <-- ..................................................
FD558048       <-- CTGGATAATAGTGCTTCc................................
HS106834       <-- ..................................................
FD948326       <-- ..................................................
EX757384       <-- ..................................................
EX762724       <-- CTGGATAAc.........................................
EW716231       <-- ..................................................
EX756930       <-- ..................................................
EY909166       <-- CTGGATAATAGTGCTTCACATAGTCTGTGACCCATTCCTTTAGTGCATCC
EX903746       <-- CTGGATAATAGTGCTTCACATAGTCTGTGATCCATTCCTTTAGTGCATCC
FD962976       <-- CTGGATAATAGTGCTTCACATAGTCTGTGATCCATTCCTTTAGTGCATCC
EW735532       <-- CTGGATAATAGTGCTTCACATAGTCTGTGACC-ATTGCTTTAGTGCATCC
EV537801       <-- ..................................................
FD549221       <-- CTGGATAATAGTGCTTCACATAGTCTGTGACCCATTCCTTTAGTGCATCC
FD979184       <-- CTGGATAATAGTGCTTCACATAGTCTGTGACCCATTCCTTTAGTGCATCC
EX902929       <-- CTGGATAATAGTGCTTCACATAATCTGTGATCCATTCCTTTAGTGCATCC
FD543785       <-- ....ATAATAGTGCTTCACATAGTCTGTGACCCATTCCTTTAGTGCATCC
EX760990       --> ..................................................
EY902057       --> ..................................................
FD539544       --> CTGGATAATAGTGCTTCACATAGTCTGTGACCCATTCCTTTAGTGCATCC
FD531854       --> ..................................................
FD545305       --> ..................................................
EY904729       --> ..................................................
FD554026       --> ..................................................
EW739608       --> CTGGATAATAGTGCTTCACATAGTCTGTGAC--ATTGCTTTAGTGCATCC
EY933743       --> ..................................................
FD975274       --> CTGGATAATAGTGCTTCACATAGTCTGTGACCCATTCCTTTAGTGCATCC

               751    -    801
UN10559        --> CACAGAATTAGACCGTCATTCGCAAATGGGTAGTCTGGTATTGTCAGCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY905679       <-- ..................................................
FD962562       <-- ..................................................
FD536366       <-- ..................................................
FD558048       <-- ..................................................
HS106834       <-- ..................................................
FD948326       <-- ..................................................
EX757384       <-- ..................................................
EX762724       <-- ..................................................
EW716231       <-- ..................................................
EX756930       <-- ..................................................
EY909166       <-- CACAGAATTAGACCGTCGTTCGCAAATGGGTAGTCTGGTATTGTCAGCCG
EX903746       <-- CACAGCATTAGACCGTCATTCGCAAATGGGTAGTCTGGTATCGTCAGCCG
FD962976       <-- CACAGAATTAGACCGTCATTCGCAAATGGGTAGTCTGGTATTGTCAGCCG
EW735532       <-- CACAGAATTAGACCGTCATTCGCAAATGGGTAGTCTGGTATTGTCAGCCG
EV537801       <-- ..................................................
FD549221       <-- CACAGAATTAGACCGTCATTCGCAAATGGGTAGTCTGGTATTGTCAGCCG
FD979184       <-- CACAGAATTAGACCGTCATTCGCAAATGGGTAGTCTGGTATTGTCAGCCG
EX902929       <-- CACAGCATTAGACCGTCATTCGCAAATGGGTAGTCTGGTATCGTCAGCCG
FD543785       <-- CACAGAATTAGACCGTCATTCGCAAATGGGTAGTCTGGTATTGTCAGCCG
EX760990       --> ..................................................
EY902057       --> ..................................................
FD539544       --> CACAGAATTAGACCGTCATTCGCAAATGGGTAGTCTGGTATTGTCAGCCG
FD531854       --> ..................................................
FD545305       --> ..................................................
EY904729       --> ..................................................
FD554026       --> ..................................................
EW739608       --> CACAGAATTAGACCGTCATTCGCAA-TGGGTAGTC...............
EY933743       --> ..................................................
FD975274       --> CACAGAATTAGACCGTCATTCGCAAATGGGTAGTCTGGTATTGTCAGCCG

               801    -    851
UN10559        --> CACCCCATGTTCCGCGTTCTCATCTTCCACAGCCAGCCCCCTGTTGATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY905679       <-- ..................................................
FD962562       <-- ..................................................
FD536366       <-- ..................................................
FD558048       <-- ..................................................
HS106834       <-- ..................................................
FD948326       <-- ..................................................
EX757384       <-- ..................................................
EX762724       <-- ..................................................
EW716231       <-- ..................................................
EX756930       <-- ..................................................
EY909166       <-- CACCCCATGTTCCGCGTTCTCATCTTCCACAGCCAGCCCCCTGTTGATGA
EX903746       <-- CACCCCc...........................................
FD962976       <-- CACCCCATGTTCCGCGTTCTCATATTCCACAGCCAGCCCCCTGCTGATGA
EW735532       <-- CACCCC............................................
EV537801       <-- ..................................................
FD549221       <-- CACCCCATGTTCCGCGTTCTCATCTTCCA-AGCCAGCCCCCTGTTGATGA
FD979184       <-- CACCCCATGTTCCGCGTTCTCATCTTCCACAGCCAGCCCCCTGTTGATGA
EX902929       <-- CACCCCATGTTCCGCGTTCTCATCTTCCACAGCCAGCCCCCTGCTGATGA
FD543785       <-- CACCCCATGTTCCGCGTTCTCATCTTCCACAGCCAGCCCCCTGTc.....
EX760990       --> ..................................................
EY902057       --> ..................................................
FD539544       --> CACCCatgt.........................................
FD531854       --> ..................................................
FD545305       --> ..................................................
EY904729       --> ..................................................
FD554026       --> ..................................................
EW739608       --> ..................................................
EY933743       --> ..................................................
FD975274       --> CCCCCCATGTTCCGCGTTCTCATCTTCCA.....................

               851    -    901
UN10559        --> GGTCTGCAGGTAAAGCTTCCTTGTCGAACCTCCATAGTTTACCATAGACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY905679       <-- ..................................................
FD962562       <-- ..................................................
FD536366       <-- ..................................................
FD558048       <-- ..................................................
HS106834       <-- ..................................................
FD948326       <-- ..................................................
EX757384       <-- ..................................................
EX762724       <-- ..................................................
EW716231       <-- ..................................................
EX756930       <-- ..................................................
EY909166       <-- GGTCTGCAGGTAAAGCTTCCTTGTCGAACCTCCATAGTTTACCATAGACG
EX903746       <-- ..................................................
FD962976       <-- GGTCTGCAGGTAAAGCTTCCTTGTCGAACCTCCATAGTTTACCATAGACG
EW735532       <-- ..................................................
EV537801       <-- ..................................................
FD549221       <-- GGTCTGCAGGTAAAGCTTCCTTGTCGAACCTCCATAGTTTACCATAGACG
FD979184       <-- GGTCTGCAGGTAAAGCTTCCTTGTCGAACCTCCATAGTTTACCATAGACG
EX902929       <-- GGTCTGCAGGTAAAGCTTCCTTGTCGAACCTCCATAGTTTACCATAGACG
FD543785       <-- ..................................................
EX760990       --> ..................................................
EY902057       --> ..................................................
FD539544       --> ..................................................
FD531854       --> ..................................................
FD545305       --> ..................................................
EY904729       --> ..................................................
FD554026       --> ..................................................
EW739608       --> ..................................................
EY933743       --> ..................................................
FD975274       --> ..................................................

               901    -    951
UN10559        --> TCTGAACTTAGCTCTAATGAATACTTGCCAGGCCAGAAAGAAGTCTCGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY905679       <-- ..................................................
FD962562       <-- ..................................................
FD536366       <-- ..................................................
FD558048       <-- ..................................................
HS106834       <-- ..................................................
FD948326       <-- ..................................................
EX757384       <-- ..................................................
EX762724       <-- ..................................................
EW716231       <-- ..................................................
EX756930       <-- ..................................................
EY909166       <-- TCTGc.............................................
EX903746       <-- ..................................................
FD962976       <-- TCTGAACTTAGCTCTAATGAATACTT........................
EW735532       <-- ..................................................
EV537801       <-- ..................................................
FD549221       <-- TCTGAACTTAGCTCTAATGAATACTTGCCAGGCCAGAAAGAAGTCTCGAT
FD979184       <-- TCTGAACTTAGCTCTAATGAATACTTGCCAGGCCAGAAAGAAGTCTCGAT
EX902929       <-- TCTGAACTTAGCTCTAATGAATACTTGCCAGGCCAGAAAGAAGTCTCGAT
FD543785       <-- ..................................................
EX760990       --> ..................................................
EY902057       --> ..................................................
FD539544       --> ..................................................
FD531854       --> ..................................................
FD545305       --> ..................................................
EY904729       --> ..................................................
FD554026       --> ..................................................
EW739608       --> ..................................................
EY933743       --> ..................................................
FD975274       --> ..................................................

               951    -   1001
UN10559        --> GATTCCACCTGCGTTGACGAGACTTTGGCGTGCACGAGCGTTGATCTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY905679       <-- ..................................................
FD962562       <-- ..................................................
FD536366       <-- ..................................................
FD558048       <-- ..................................................
HS106834       <-- ..................................................
FD948326       <-- ..................................................
EX757384       <-- ..................................................
EX762724       <-- ..................................................
EW716231       <-- ..................................................
EX756930       <-- ..................................................
EY909166       <-- ..................................................
EX903746       <-- ..................................................
FD962976       <-- ..................................................
EW735532       <-- ..................................................
EV537801       <-- ..................................................
FD549221       <-- GATTCCACCTGCGTTGACGAGACTTTGGCGTGCACGAGCGTTGATCTCCA
FD979184       <-- GATTCCACCTGCGTTGAC................................
EX902929       <-- GATTCCACCTGCGTTGACGAGACTTTGGCGTGCACGAGCGTTGATCTCCA
FD543785       <-- ..................................................
EX760990       --> ..................................................
EY902057       --> ..................................................
FD539544       --> ..................................................
FD531854       --> ..................................................
FD545305       --> ..................................................
EY904729       --> ..................................................
FD554026       --> ..................................................
EW739608       --> ..................................................
EY933743       --> ..................................................
FD975274       --> ..................................................

               1001   -   1051
UN10559        --> TGGTGTAGCGGAAGTGGGGAAACAAAAGCCTATAGATAGGATGCATGGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY905679       <-- ..................................................
FD962562       <-- ..................................................
FD536366       <-- ..................................................
FD558048       <-- ..................................................
HS106834       <-- ..................................................
FD948326       <-- ..................................................
EX757384       <-- ..................................................
EX762724       <-- ..................................................
EW716231       <-- ..................................................
EX756930       <-- ..................................................
EY909166       <-- ..................................................
EX903746       <-- ..................................................
FD962976       <-- ..................................................
EW735532       <-- ..................................................
EV537801       <-- ..................................................
FD549221       <-- TGGTGc............................................
FD979184       <-- ..................................................
EX902929       <-- TGGTGTAGCGGAAGTGGGGAAACAAAAGCCTATAGATAGGATGCATGGCA
FD543785       <-- ..................................................
EX760990       --> ..................................................
EY902057       --> ..................................................
FD539544       --> ..................................................
FD531854       --> ..................................................
FD545305       --> ..................................................
EY904729       --> ..................................................
FD554026       --> ..................................................
EW739608       --> ..................................................
EY933743       --> ..................................................
FD975274       --> ..................................................

               1051   -   1101
UN10559        --> CTTAGTTGTCTGTTTGCCGCTATTATGTATGGCTCCATACAACAATGAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY905679       <-- ..................................................
FD962562       <-- ..................................................
FD536366       <-- ..................................................
FD558048       <-- ..................................................
HS106834       <-- ..................................................
FD948326       <-- ..................................................
EX757384       <-- ..................................................
EX762724       <-- ..................................................
EW716231       <-- ..................................................
EX756930       <-- ..................................................
EY909166       <-- ..................................................
EX903746       <-- ..................................................
FD962976       <-- ..................................................
EW735532       <-- ..................................................
EV537801       <-- ..................................................
FD549221       <-- ..................................................
FD979184       <-- ..................................................
EX902929       <-- CTTAGTTGTCTGTTTGCCGCTATTATGTATGGCTCCATACAACAATGAGT
FD543785       <-- ..................................................
EX760990       --> ..................................................
EY902057       --> ..................................................
FD539544       --> ..................................................
FD531854       --> ..................................................
FD545305       --> ..................................................
EY904729       --> ..................................................
FD554026       --> ..................................................
EW739608       --> ..................................................
EY933743       --> ..................................................
FD975274       --> ..................................................

               1101   -   1151
UN10559        --> CCTCAGCCAGTGGGAGATAAGCTGATGATAACCGGCATCATGAGAAACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY905679       <-- ..................................................
FD962562       <-- ..................................................
FD536366       <-- ..................................................
FD558048       <-- ..................................................
HS106834       <-- ..................................................
FD948326       <-- ..................................................
EX757384       <-- ..................................................
EX762724       <-- ..................................................
EW716231       <-- ..................................................
EX756930       <-- ..................................................
EY909166       <-- ..................................................
EX903746       <-- ..................................................
FD962976       <-- ..................................................
EW735532       <-- ..................................................
EV537801       <-- ..................................................
FD549221       <-- ..................................................
FD979184       <-- ..................................................
EX902929       <-- CCTCAGCCAGTGGGAGATAAGCTGATGATAACCGGCATCATGAGAAACAA
FD543785       <-- ..................................................
EX760990       --> ..................................................
EY902057       --> ..................................................
FD539544       --> ..................................................
FD531854       --> ..................................................
FD545305       --> ..................................................
EY904729       --> ..................................................
FD554026       --> ..................................................
EW739608       --> ..................................................
EY933743       --> ..................................................
FD975274       --> ..................................................

               1151   -   1201
UN10559        --> CGTGAGTCTTAGCAAGTTTCCATAGCCAGGCGGAGGTAGCATTATACCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY905679       <-- ..................................................
FD962562       <-- ..................................................
FD536366       <-- ..................................................
FD558048       <-- ..................................................
HS106834       <-- ..................................................
FD948326       <-- ..................................................
EX757384       <-- ..................................................
EX762724       <-- ..................................................
EW716231       <-- ..................................................
EX756930       <-- ..................................................
EY909166       <-- ..................................................
EX903746       <-- ..................................................
FD962976       <-- ..................................................
EW735532       <-- ..................................................
EV537801       <-- ..................................................
FD549221       <-- ..................................................
FD979184       <-- ..................................................
EX902929       <-- CGTGAGTCTTAGCAAGTTTCCATAGCCAGGCGGAGGTAGCATTATACCCT
FD543785       <-- ..................................................
EX760990       --> ..................................................
EY902057       --> ..................................................
FD539544       --> ..................................................
FD531854       --> ..................................................
FD545305       --> ..................................................
EY904729       --> ..................................................
FD554026       --> ..................................................
EW739608       --> ..................................................
EY933743       --> ..................................................
FD975274       --> ..................................................

               1201   -   1251
UN10559        --> GGCGTGAAGACCTGCTTCCATTGGGGCCTGTTGACATCTGGGGGACGAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY905679       <-- ..................................................
FD962562       <-- ..................................................
FD536366       <-- ..................................................
FD558048       <-- ..................................................
HS106834       <-- ..................................................
FD948326       <-- ..................................................
EX757384       <-- ..................................................
EX762724       <-- ..................................................
EW716231       <-- ..................................................
EX756930       <-- ..................................................
EY909166       <-- ..................................................
EX903746       <-- ..................................................
FD962976       <-- ..................................................
EW735532       <-- ..................................................
EV537801       <-- ..................................................
FD549221       <-- ..................................................
FD979184       <-- ..................................................
EX902929       <-- GGCGTGAAGACCTGCTTCCATTGGGGCCTGTTGACATCTGGGGGACGAGT
FD543785       <-- ..................................................
EX760990       --> ..................................................
EY902057       --> ..................................................
FD539544       --> ..................................................
FD531854       --> ..................................................
FD545305       --> ..................................................
EY904729       --> ..................................................
FD554026       --> ..................................................
EW739608       --> ..................................................
EY933743       --> ..................................................
FD975274       --> ..................................................

               1251   -   1301
UN10559        --> CAACTCAATGGCC
                   ~~~~~~~~~~~~~
EY905679       <-- .............
FD962562       <-- .............
FD536366       <-- .............
FD558048       <-- .............
HS106834       <-- .............
FD948326       <-- .............
EX757384       <-- .............
EX762724       <-- .............
EW716231       <-- .............
EX756930       <-- .............
EY909166       <-- .............
EX903746       <-- .............
FD962976       <-- .............
EW735532       <-- .............
EV537801       <-- .............
FD549221       <-- .............
FD979184       <-- .............
EX902929       <-- CAACTCAATGGCC
FD543785       <-- .............
EX760990       --> .............
EY902057       --> .............
FD539544       --> .............
FD531854       --> .............
FD545305       --> .............
EY904729       --> .............
FD554026       --> .............
EW739608       --> .............
EY933743       --> .............
FD975274       --> .............