1      -     51
UN10585        --> GTCAAATGAAATATGATTCATTCTTTTATTAATTGTTCCGAATGGATAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556341       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV569787       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV567884       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD982362       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755841       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540954       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX904621       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD981081       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV574244       --> GTCAAATGAAATATGATTCATTCTTTTATTAATTGTTCCGAATGGATAAT  Raphanus raphanistrum subsp. landra
FD983792       --> aTCAAATGAAATATGATTCATTCTTTTATTAATTGTTCCGAATGGATAAT  Raphanus raphanistrum subsp. landra
EV572730       --> ..CAAATGAAATATGATTCATTCTTTTATTAATTGTTCCGAATGGATAAT  Raphanus raphanistrum subsp. landra
EX908490       --> ..CAAATGAAATATGATTCATTCTTTTATTAATTGTTCCGAATGGATAAT  Raphanus sativus cv Rat-Tail Radish #3870
FD537349       --> ..CAAATGAAATATGATTCATT-TTTTATTAATTGTTCCGAATGGATAAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD977942       --> ..CAAATGAAATATGATTCATT-TTTTATTAATTGTTCCGAATGGATAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD977672       --> ...AAATGAAATATGATTCATT-TTTTATTAATTGTTCCGAATGGATAAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552671       --> .......GAAATATGATTCATTCTTTTATTAATTGTTCCGAATGGATAAT  Raphanus raphanistrum subsp. landra

               51     -    101
UN10585        --> ACAGCTATCCTTATACAT-GATTTATGATGATGGTAAGTTTAGATAAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556341       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV569787       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV567884       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD982362       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755841       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540954       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX904621       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD981081       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV574244       --> ACAGCTATCCTTATACAT-GATTTATGATGATGGTAAGTTTAGATAAAGA  Raphanus raphanistrum subsp. landra
FD983792       --> ACAGCTATCCTTATACAT-GATTTATGATGATGGTAAGTTTAGATAAAGA  Raphanus raphanistrum subsp. landra
EV572730       --> ACAGCTATCCTTATACAT-GATTTATGATGATGGTAAGATTAGATAAAGA  Raphanus raphanistrum subsp. landra
EX908490       --> ACAGCTATCCTTATACAT-GATTTATGATGATGGTAAGTTTAGATAAAGA  Raphanus sativus cv Rat-Tail Radish #3870
FD537349       --> ATAGCTGTCCTTATACAT-AAGTTATGATGATGGTAAGTTTAGATAAAGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD977942       --> ATAGCTGTCCTTATACATAAAGTTGTGATGATGGTAAGTTTAGATAAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD977672       --> ATAGCTGTTCTTATACATAAAGTTGTGATGATGGTAAGTTTAGATAAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552671       --> ACAGCTATCCTTATACAT-GATTTATGATGATGGTAAGTTTAGATAAAGA  Raphanus raphanistrum subsp. landra

               101    -    151
UN10585        --> TCGGTTGCTTGATCTTCACGTTGCAACTCGGAAGAGGTGCACCACACAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556341       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV569787       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV567884       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD982362       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755841       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540954       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX904621       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD981081       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV574244       --> TCGGTTGCTTGATCTTCACGTTGCAACTCGGAAGAGGTGCACCACACAAG  Raphanus raphanistrum subsp. landra
FD983792       --> TCGGTTGCTTGATCTTCACGTTGCAACTCGGAAGAGGTGCACCACACAAG  Raphanus raphanistrum subsp. landra
EV572730       --> TCGGTTGCTTGATCTTCACGTTGCAACTCGGAAGAGGTGCACCACACAAG  Raphanus raphanistrum subsp. landra
EX908490       --> TCGGTTGCTTGATCTTTACGTTGCAACTCGGAAGAGGTGCACCACACAAG  Raphanus sativus cv Rat-Tail Radish #3870
FD537349       --> TCGGTTGCTTGATCTTCACGTTGCAACTCGGAAGAGGTGCACCACACAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD977942       --> TCGGTTGCTTGATCTTTACATTGCAACTCGGAAGAGGTGCACCACACAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD977672       --> TCGGTTGCTTGATCTTTACATTGCAACTCGGAAGAGGTGCACCACACAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552671       --> TCGGTTGCTTGATCTTCACGTTGCAACTCGGAAGAGGTGCACCACACAAG  Raphanus raphanistrum subsp. landra

               151    -    201
UN10585        --> CACTTGTTGTGTAAATAGGCATAAGCATCAAAACTCTGAAGGTCACCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556341       <-- ..................................................
EV569787       <-- ..................................................
EV567884       <-- ..................................................
FD982362       <-- ..................................................
EX755841       <-- ..................................................
FD540954       <-- ..................................................
EX904621       <-- ..................................................
FD981081       <-- ..................................................
EV574244       --> CACTTGTTGTGTAAATAGGCATAAGCATCAAAACTCTGAAGGTCACCTCC
FD983792       --> CACTTGTTGTGTAAATAGGCATAAGCATCAAAACTCTGAAGGTCACCCCC
EV572730       --> CACTTGTTGTGTAAATAGGCATAAGCATCAAAACTCTGAAGGTCACCTCC
EX908490       --> CACTTGTTGTGTAAATAGGCATAAGCATCAAAACTCTGAAGGTCACCTCC
FD537349       --> CACTTGTTGTGTAAATAGGCATAAGCATCAAAACTCTGAAGGTCACCTCC
FD977942       --> CACTTGTTGTGTAAATAGGCATAAGCATCAAAACTCTGAAGGTCACCTCC
FD977672       --> CACTTGTTGTGTAAATAGGAATAAGCATCAAAACTCTGAAGGTCACCTCC
FD552671       --> CACTTGTTGTGTAAATAGGCATAAGCATCAAAACTCTGAAGGTCACCTCC

               201    -    251
UN10585        --> CTGGGGAATGCGTCCACACAATCTGTTATAGCTAACGTTGAAAGTCTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556341       <-- ..................................................
EV569787       <-- ..................................................
EV567884       <-- ..................................................
FD982362       <-- ..................................................
EX755841       <-- ..................................................
FD540954       <-- ..................................................
EX904621       <-- ..................................................
FD981081       <-- ..................................................
EV574244       --> CTGGGGAATGCGTCCACACAATCTGTTATAGCTAACGTTGAAAGTCTGAA
FD983792       --> CTGGGGAATGCGTCCACACAATCTGTTATAGCTAACGTTGAAAGTCTGAA
EV572730       --> CTGGGGAATGCGTCCACACAATCTGTTATAGCTAACGTTGAAAGTCTGAA
EX908490       --> CTGGGGAATGCGTCCACGCAATCTGTTATAGCTAACGTTGAAAGTCTGAA
FD537349       --> CTGGGGAATGCGTCCACACAATCTGTTATAGCTAACGTTGAAAGTCTGAA
FD977942       --> CTGAGGAATGCGTCCACACAATCTGTTATAGCTAACGTTGAAAGTCTGAA
FD977672       --> CTGAGGAATGCGTCCACACAATCTGTTATAGCTAACGTTGAAAGTCTGAA
FD552671       --> CTGGGGAATGCGTCCACACAATCTGTTATAGCTAACGTTGAAAGTCTGAA

               251    -    301
UN10585        --> GATCAAGTTGGGTCCATTGATCCGGGATACTCCCTGTGAGGCTGTTGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556341       <-- ...............caTGATCCGGGATACTCCCTGTGAGGCTGTTGTGA
EV569787       <-- ..................................................
EV567884       <-- ..................................................
FD982362       <-- ..................................................
EX755841       <-- ..................................................
FD540954       <-- ..................................................
EX904621       <-- ..................................................
FD981081       <-- ..................................................
EV574244       --> GATCAAGTTGGGTCCATTGATCCGGGATACTCCCTGTGAGGCTGTTGTGA
FD983792       --> GATCAAGTTGGGTCCATTGATCCGGGATACTCCCTGTGAGGCTGTTGTGA
EV572730       --> GATCAAGTTGGGTCCATTGATCCGGGATACTCCCTGTGAGGCTGTTGTGA
EX908490       --> GATCAAGTTGGGTCCATTGATCCGGGATACTCCCTGTGAGGCTGTTGTGA
FD537349       --> GATCAAGTTGGGTCCATTGATCCGAGATACTCCCTGTGAGGCTGTTGTGA
FD977942       --> GATCAAGTTGGGTCCATTGATCCGGGATACTCCCTGTGAGGCTGTTGTGA
FD977672       --> GATCAAGTTGGGTCCATTGATCCGGGATACTCCCTGTGAGGCTGTTGTGA
FD552671       --> GATCAAGTTGGGTCCATTGATCCGGGATACTCCCTGTGAGGCTGTTGTGA

               301    -    351
UN10585        --> TTCAAGTCCAAGAAACGAACTGTCATAGCGACCTTAACCTTGGAGATATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556341       <-- TTCAAGTCCAAGAAACGAACTGTCATAGCGACCTTAACCTTGGAGATATC  Raphanus raphanistrum subsp. landra
EV569787       <-- ..........AGAAACGAACTGTCATAGCGAC-TTAAC-TTGGAGATATC  Raphanus raphanistrum subsp. landra
EV567884       <-- ..........................................GAGATATC  Raphanus raphanistrum subsp. landra
FD982362       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755841       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540954       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX904621       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD981081       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV574244       --> TTCAAGTCCAAGAAACGAACTGTCATAGCGACCTTAACCTTGGAGATATC  Raphanus raphanistrum subsp. landra
FD983792       --> TTCAAGTCCAAGAAACGAACTGTCATAGCGACCTTAACCTTGGAGATATC  Raphanus raphanistrum subsp. landra
EV572730       --> TTCAAGTCCAAGAAACGAACTGTCATAGCGACCTTAACCTTGGAGATATC  Raphanus raphanistrum subsp. landra
EX908490       --> TTCAAGTCCAAGAAACGAACTGTCTTAGCGACCTTAACCTTGGAGATATC  Raphanus sativus cv Rat-Tail Radish #3870
FD537349       --> TTCAAGTCCAAGAAGCGAACTGTCTTAGCAACCTTAACCTTGGAGATATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD977942       --> TTCAAGTCCAAGAAACGAACTGTCTTAGCGACCTTAACCTTGGAGATATC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD977672       --> TTCAAGTCCAAGAAACGAACTGTCTTAGCGACCTTAACCTTGGAGATATC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552671       --> TTCAAGTCCAAGAAACGAACTGTCATAGCGACCTTAACCTTGGAGATATC  Raphanus raphanistrum subsp. landra

               351    -    401
UN10585        --> GAACTGGAACATGTTTCTAGATAAGTCGATGTGCCATGTCTTCTTTTTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556341       <-- GAACTGGAACATGTTTCTAGATAAGTCGATGTGCCATGTCTTCTTTTTGG
EV569787       <-- GAACTGGAACATGTTTCTAGATAAGTCGATGTGCCATGTCTTCTTTT-GG
EV567884       <-- GAACTGGAACATGTTTCTAGATAAGTCGATGTGCCATGTCTTCTTTTTGG
FD982362       <-- .......AACATGTTTCTAGATAAGTCGATGTGCCATGTCTTCTTTT-GG
EX755841       <-- .................TAGATA-GTCAATGTGCCATGTCT-CTTTT-GG
FD540954       <-- ..................AGATAAGTCAATGTGCCATGTCTTCTTTT-GG
EX904621       <-- ..................................................
FD981081       <-- ..................................................
EV574244       --> GAACTGGAACATGTTTCTAGATAAGTCGATGTGCCATGTCTTCTTTTTGG
FD983792       --> GAACTGGAACATGTTTCTAGATAAGTCGATGTGCCATGTCTTCTTTTTGG
EV572730       --> GAACTGGAACATGTTTCTAGATAAGTCGATGTGCCATGTCTTCTTTTTGG
EX908490       --> GAACTGGAACATGTTTCTAGATAAGTCGATGTGCCATGTCTTCTTTTTGG
FD537349       --> GAACTGGAACATGTTTTTAGATAAGTCAATGTGCCATGTCTTCTTTTTGG
FD977942       --> GAACTGGAACATGTTTCTAGATAAGTCGATGTGCCATGTCTTCTTTTTGG
FD977672       --> GAACTGGAACATGTTTCTAGATAAGTCGATGTGCCATGTCTTCTTTTTGG
FD552671       --> GAACTGGAACATGTTTCTAGATAAGTCGATGTGCCATGTCTTCTTTTTGG

               401    -    451
UN10585        --> CTCCAAACAACATCGACGCATCACCTTCAAGCTTGTTCCGGGAAAGATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556341       <-- CTCCAAACAACATCGACGCATCACCTTCAAGCTTGTTCCGGGAAAGATCA  Raphanus raphanistrum subsp. landra
EV569787       <-- CTCCAAACAACATCGACGCATCACCTTCAAGCTTGTTCCGGGAAAGATCA  Raphanus raphanistrum subsp. landra
EV567884       <-- ATCCAAACAACATCGACGCATCACTTTCAAGCTTGTTCCGGGAAAGATCA  Raphanus raphanistrum subsp. landra
FD982362       <-- CTCCAAACAACATCGACGCACCACCT-CAAGCTTGT-CCGAGAAAGATCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755841       <-- CTCCAAACAACATCGACGCATCAC-TTCAAGCTTGT-CCGGGAAAGATCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540954       <-- CTCCAAACAACATCGACGCATCACTTTCAAGCTTGTTCCGGGAAAGATCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX904621       <-- ............................AAGCTTGTTCCGGGAAAGATCA  Raphanus sativus cv Rat-Tail Radish #3870
FD981081       <-- .............................caagctgTCCGAGAAAGATCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV574244       --> CTCCAAACAACATCGACGCATCACCTTCAAGCTTGTTCCGGGAAAGATCA  Raphanus raphanistrum subsp. landra
FD983792       --> CTCCAAACAACATCGACGCATCACCTTCAAGCTTGTTCCGGGAAAGATCA  Raphanus raphanistrum subsp. landra
EV572730       --> ATCCAAACAACATCGACGCATCACCTTCAAGCTTGTTCCGGGAAAGATCA  Raphanus raphanistrum subsp. landra
EX908490       --> CTCCAAACAACATCGACGCATCACCTTCAAGCTTGTTCCGGGAAAGATCA  Raphanus sativus cv Rat-Tail Radish #3870
FD537349       --> CTCCAAACAACATCGACGCATCACCTTCAAGCTTGTTCCGGGAAAGATCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD977942       --> CTCCAAACAACATCGACGCACCACCTTCAAGCTTGTTCCGAGAAAGATCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD977672       --> CTCCAAACAACATCGACGCATCACCTTCAAGCTTGTTCCGAGAAAGATCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552671       --> CTCCAAACAACATCGACGCATCACCTTCAAGCTTGTTCCGGGAAAGATCA  Raphanus raphanistrum subsp. landra

               451    -    501
UN10585        --> ATCGTGTTAAAGTCGAGGTTGCCTAGTGATTTTGGTATAGAACCGGACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556341       <-- ATCGTGTTAAAGTCGAGGTTGCCTAGTGATTTTGGTATAGAACCGGACAG  Raphanus raphanistrum subsp. landra
EV569787       <-- ATCGTGTTAAAGTCGAGGTTGCCTAGTGATTTTGGTATAGAACCGGACAG  Raphanus raphanistrum subsp. landra
EV567884       <-- ATCGTGTTAAAGTCGAGGTTGCCTAGTGATTTTGGTATAGAACCGGACAG  Raphanus raphanistrum subsp. landra
FD982362       <-- ATCGTGTTAAAGTCGAGGTTGCCTAGTGATTTTGGTATAGAACCGGTCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755841       <-- ATCGTGTTAAAGTCGAGGTTGC-TAGTGATTTTGGTATAGAACGGGACAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540954       <-- ATCGTGTTAAAGTCGAGGTTGCCTAGTGATTTTGGTATAGAACCGGACAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX904621       <-- ATCGTGTTAAAGTCGAGGTTGCCTAGTGATTTTGGTATAGAACCGGACAG  Raphanus sativus cv Rat-Tail Radish #3870
FD981081       <-- ATCGTGTTAAAGTCGAGGTTGCCTAGTGATTTTGGTATAGAACCGGTCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV574244       --> ATCGTGTTAAAGTCGAGGTTGCCTAGTGATTTTGGTATAGAACCGGACAG  Raphanus raphanistrum subsp. landra
FD983792       --> ATCGTGTTAAAGTCGAGGTTGCCTAGTGATTTTGGTATAGAACCGGACAG  Raphanus raphanistrum subsp. landra
EV572730       --> ATCGTGTTAAAGTCGAGGTTGCCTAGTGATTTTGGTATAGAACCGGACAG  Raphanus raphanistrum subsp. landra
EX908490       --> ATCGTGTTAAAGTCGAGGTTGCCTAGTGATTTTGGTATAGAACCGGACAG  Raphanus sativus cv Rat-Tail Radish #3870
FD537349       --> ATCGTGTTAAAGTCGAGGTTGCCTAGTGATTTTGGTATAGAACCGGACAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD977942       --> ATCGTGTTAAAGTCGAGGTTGCCTAGTGATTTTGGTATAGAACCGGTCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD977672       --> ATCGTGTTAAAGTCGAGGTTGCCTAGTGATTTTGGTATAAAACCGGTCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552671       --> ATCGTGTTAAAGTCGAGGTTGCCTAGTGATTTTGGTATAGAACCGGACAG  Raphanus raphanistrum subsp. landra

               501    -    551
UN10585        --> CTGGTTGTGTGATAGGTAAATCCCATATACATCTCCTTTAAACGATCCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556341       <-- CTGGTTGTGTGATAGGTAAATCCCATATACATCTCCTTTAAACGATCCAA
EV569787       <-- CTGGTTGTGTGATAGGTAAATCCCATATACATCTCCTTTAAACGATCCAA
EV567884       <-- CTGGTTGTGTGATAGGTAAATCCCATATACATCTCCTTTAAACGATCCAA
FD982362       <-- CTGGTTGTGTGATAGGTAAATCCCATATACATCTCCTTTAAACGATCCAA
EX755841       <-- CTGGTTGTGTGATAGGTAAATCCCATATACATCTCCTTTAAACGATCCAA
FD540954       <-- CTGGTTGTGTGATAGGTAAATCCCATATACATCTCCTTTAAACGATCCAA
EX904621       <-- CTGGTTGTGTGATAGGTAAATCCCATATACATCTCCTTTAAACGATCCAA
FD981081       <-- CTGGTTGTGTGATAGGTAAATCCCATATACATCTCCTTTAAACGATCCAA
EV574244       --> CTGGTTGTGTGATAGGTAAATCCCATATACATCTCCTTTAAACGATCCAA
FD983792       --> CTGGTTGTGTGATAGGTAAATCCCATATACATCTCCTTTAAACGATCCAA
EV572730       --> CTGGTTGTGTGATAGGTAAATCCCATATACATCTCCTTTAAACGATCCAA
EX908490       --> CTGGTTGTGTGATAGGTAAATCCCATATACATCTCCTTTAAACGATCCAA
FD537349       --> CTGGTTGTGTGATAGGTAAATCCCATATACATCTCCTTTAAACGATCCAA
FD977942       --> CTGGTTGTGTGATAGGTAAATCCCATATACATCTCCTTTAAACGATCCAA
FD977672       --> CTGGTTGTGTGATAGGTAAATCCCATATACATCTCCTTTAAACGATCCAA
FD552671       --> CTGGTTGTGTGATAGGTAAATCCCATATACATCTCCTTTAAACGATCCAA

               551    -    601
UN10585        --> ATGACTCTGGTATCGTACCTGTAAGCTTGTTCCTGCTGAGTTCTAGTGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556341       <-- ATGACTCTGGTATCGTACCTGTAAGCTTGTTCCTGCTGAGTTCTAGTGCA
EV569787       <-- ATGACTCTGGTATCGTACCTGTAAGCTTGTTCCAGCTGAGTTCTAGTGCA
EV567884       <-- ATGACTCTGGTATCGTACCTGTAAGCTTGTTCCTGCTGAGTTCTAGTGCA
FD982362       <-- ATGACTCTGGTACCGTACCTGTAAGCTTGTTCCTGCTGAGTTCTAGTGCA
EX755841       <-- ATGACTCTGGTATCGTACCTGTAAGCTTGTTCCTGCTGAGTTCTAGTGCA
FD540954       <-- ATGACTCTGGTATCGTACCTGTAAGCTTGTTCCTGCTGAGTTCTAGTGCA
EX904621       <-- ATGACTCTGGTATCGTACCTGTAAGCTTGCTCCTGCTGAGTTCTAGTGCA
FD981081       <-- ATGACTCTGGTATCGTACCTGTAAGCTTGTTCCTGCTGAGTTCTAGTGCA
EV574244       --> ATGACTCTGGTATCGTACCTGTAAGCTTGTTCCAGCTGAGTTCTAGTGCA
FD983792       --> ATGACTCTGGTATCGTACCTGTAAGCTTGTTCCTGCTGAGTTCTAGTGCA
EV572730       --> ATGACTCTGGTATCGTACCTGTAAGCTTGTTCCTGCTGAGTTCTAGTGCA
EX908490       --> ATGACTCTGGTATCGTACCTGTAAGCTTGCTCCTGCTGAGTTCTAGTGCA
FD537349       --> ATGACTCTGGTATCGTACCTGTAAGCTTGTTCCTGCTGAGTTCTAGTGCA
FD977942       --> ATGACTCTGGTACCGTACCTGTAAGCTTGTTCCTGCTGAGTTCTAGTGCA
FD977672       --> ATGACTCTGGTATCGTACCTGTAAGCTTGTTCCTGCTGAGTTCTAGTGCA
FD552671       --> ATGACTCTGGTATCGTACCTGTAAGCTTGTTCCTGCTGAGTTCTAGTGCA

               601    -    651
UN10585        --> GTCAGATTAGGTAACAAAGAGAGTGAACCGGGTATGGAACCGGAGAGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556341       <-- GTCAGATTAGGTAACAAAGAGAGTGAACCGGGTATGGAACCGGAGAGTTT
EV569787       <-- GTCAGATTAGGTAACAAAGAGAGTGAACCGGGTATGGAACCGGAGAGTTT
EV567884       <-- GTCAGATTAGGTAACAAAGAGAGTGAACCGGGTATGGAACCGGAGAGTTT
FD982362       <-- GTCAGATTAGGTAACAAAGAGAGTGAACCGGGTATGGAACCGGAGAGTTT
EX755841       <-- GTCAGATTAGGTAACAAAGAGAGTGAACCGGGTATGGAACCGGAGAGTTT
FD540954       <-- GTCAGATTAGGTAACAAAGAGAGTGAACCGGGTATGGAACCGGAGAGTTT
EX904621       <-- GTCAGATTAGGTAACAAAGAGAGTGAACCGGGTATGGAACCGGAGAGTTT
FD981081       <-- GTCAGATTAGGTAACAAAGAGAGTGAACCGGGTATGGAACCGGAGAGTTT
EV574244       --> GTCAGATTAGGTAACAAAGAGAGTGAACCGGGTATGGAACCGGAGAGTTT
FD983792       --> GTCAGATTAGGTAACAAAGAGAGTGAACCGG------------AGAGTTT
EV572730       --> GTCAGATTAGGTAACAAAGAGAGTGAACCGGGTATGGAACCGGAGAGTTT
EX908490       --> GTCAGATTAGGTAACAAAGAGAGTGAACCGGGTATGGAACCGGAGAGTTT
FD537349       --> GTCAGATTAGGTAACAAAGAGAGTGAACCGGGTATGGAACCGGAGAGTTT
FD977942       --> GTCAGATTAGGTAACAAAGAGAGTGAACCGGGTATGGAACCGGAGAGTTT
FD977672       --> GTCAGATTAGGTAACAAAGAGAGTGAACCGGGTATGGAACCGGAGAGTTT
FD552671       --> GTCAGATTAGGTAACAAAGAGAGTGAACCGGGTATGGAA...........

               651    -    701
UN10585        --> ATTGAAGGAAAGGTTTATGTACTCTAGATTCTTGAGTTGACTCAGAAATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556341       <-- ATTGAAGGAAAGGTTTATGTACTCTAGATTCTTGAGTTGACTCAGAAATT
EV569787       <-- ATTGAAGGAAAGGTTTATGTACTCTAGATTCTTGAGTTGACTCAGAAATT
EV567884       <-- ATTGAAGGAAAGGTTTATGTATTCTAGATTCTTGAGTTGACTCAGAAATT
FD982362       <-- ATTGAAGGAAAGGTTTATGTACTCTAGATTCTTGAGTTGACTCAGAAATT
EX755841       <-- ATTGAAGGAAAGGTTTATGTACTCTAGATTCTTGAGTTGACTCAGAAATT
FD540954       <-- ATTGAAGGAAAGGTTTATGTACTCTAGATTCTTGAGTTGACTCAGAAATT
EX904621       <-- ATTGAAGGAAAGGTTTATGTACTCTAGATTCTTGAGTTGACTCAGAAATT
FD981081       <-- ATTGAAGGAAAGGTTTATGTACTCTAGATTCTTGAGTTGACTCAGAAATT
EV574244       --> ATTGAAGGAAAGGTTTATGTACTCTAGATTCTTGAGTTGACTCAGAAATT
FD983792       --> ATTGAAGGAAAGGTTTATGTACTCTAGATTCTTGAGTTGACTCAGAAATT
EV572730       --> ATTGAAGGAAAGGTTTATGTATTCTAGATTCTTGAGTTGACTCAGAAATT
EX908490       --> ATTGAAGGAAAGGTTTATGTACTCTAGATTCTTGAGTTGACTCAGAAATT
FD537349       --> ATTGAAGGAAAGGTTTATGTACTCTAGATTCTTGAGTTGA..........
FD977942       --> ATTGAAGGAAAGGTTTATGTACTCTAGATTCTTGAGTTGACTC.......
FD977672       --> ATTGAAGGAAAGGTTTATGTACTCTAGATTCTTGAGTTGACTCAGAAATT
FD552671       --> ..................................................

               701    -    751
UN10585        --> CAGGAACCGGGCCGGTCAGGTTGTTCCAGCTGAGCCAGAGAAATTTGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556341       <-- CAGGAACCGGGCCGGTCAGGTTGTTCCAGCTGAGCCAGAGAAATTTGAGA
EV569787       <-- CAGGAACCGGGCCGGTCAGGTTGTTCCAGCTGAGCCAGAGAAATTTGAGA
EV567884       <-- CAGGAACCGGGCCGGTCAGGTTGTTCCAGCTGAGCCAGAGAAATTTGAGA
FD982362       <-- CAGGAACCGGGCCGGTCAGGTTGTTCCAGCTGAGCCAGAGAAATTTGAGA
EX755841       <-- CAGGAACCGGGCCGGTCAGGTTGTTCCAGCTGAGCCAGAGAAATTTGAGA
FD540954       <-- CAGGAACCGGGCCGGTCAGGTTGTTCCAGCTGAGCCAGAGAAATTTGAGA
EX904621       <-- CAGGAACCGGGCCGGTCAGGTTGTTCCAGCTGAGCCAGAGAAATTTGAGA
FD981081       <-- CAGGAACCGGGCCGGTCAGGTTGTTCCAGCTGAGCCAGAGAAATTTGAGA
EV574244       --> CAGGAACCGGGCCGGTCAGGTTGTTCCAGCTGAGCCAGAGAAATTTGAGA
FD983792       --> CAGGAACCGGGCCGGTCAGGTTGTTCCAGCTGAGCCAGAGAAATTTGAGA
EV572730       --> CAGGAACCGGGCCGGTCAGGTTGTTCCAGCTGAGCCAGAGAAATTTGAGA
EX908490       --> CAGGAACCGGGCCGGTCAGGTTGTTCCAGCTGAGCCAGAGAAAT......
FD537349       --> ..................................................
FD977942       --> ..................................................
FD977672       --> CAGGAACCGGGCCGGTCAGGTTGTTCCAGCTGAGCCAGAGAAATTTGAGA
FD552671       --> ..................................................

               751    -    801
UN10585        --> TACTTGAGCTTGGCAATGGTGGG-TGGGATTTCACCGGTGAGGTTAGGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556341       <-- TACTTGAGCTTGGCAATGGTGGG-TGGGATTTCACCGGTGAGGTTAGGGA
EV569787       <-- TACTTGAGCTTGGCAATGGTGGG-TGGGATTTCACCGGTGAGGTTAGGGA
EV567884       <-- TACTTGAGCTTGGCAATGGTGGG-TGGGATTTCACCGGTGAGGTTAGGGA
FD982362       <-- TACTTGAGCTTGGCAATGGTGGG-TGGGATTTCACCGGTGAGGTTAGGGA
EX755841       <-- TACTTGAGCTTGGCAATGGTGGG-TGGGATTTCACCGGTGAGGTTAGGGA
FD540954       <-- TACTTGAGCTTGGCAATGGTGGG-TGGGATTTCACCGGTGAGGTTAGGGA
EX904621       <-- TACTTGAGCTTGGCAATGGTGGG-TGGGATTTCACCGGTGAGGTTAGGGA
FD981081       <-- TACTTGAGCTTGGCAATGGTGAG-TGGGATTTCACCGGTGAGGTTAGGGA
EV574244       --> TACTTGAGCTTGGCAATGGTGGG-TGGGATTTCA................
FD983792       --> TACTTGAGCTTGGCAATGGTGGG-TGGGATTTCACCGG............
EV572730       --> TACTTGAGCTTGGCA...................................
EX908490       --> ..................................................
FD537349       --> ..................................................
FD977942       --> ..................................................
FD977672       --> TACTTGAGCTTGGCAATGGGGGGGTGGGATTTCACCGGTGAGGTTAGGGA
FD552671       --> ..................................................

               801    -    851
UN10585        --> GTTTGCGGAGTGTGAGGTATTGTAGATACGGTAAGTCGCCGACTTCAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556341       <-- GTTTGCGGAGTGTGAGGTATTGTAGATACGGTAAGTCGCCGACTTCAGGA  Raphanus raphanistrum subsp. landra
EV569787       <-- GTTTGCGGAGTGTGAGGTATTGTAGATACGGTAAGTCGCCGACTTCAGGA  Raphanus raphanistrum subsp. landra
EV567884       <-- GTTTGCGGAGTGTGAGGTATTGTAGATACGGTAAGTCGCCGACTTCAGGA  Raphanus raphanistrum subsp. landra
FD982362       <-- GTTTGCGGAGTGTGAGGTATTGTAGATACGGTAAGTCGCCGACTTCAGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX755841       <-- GTTTGCGGAGTGTGAGGTATTGTAGATACGGTAAGTCGCCGACTTCAGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD540954       <-- GTTTGCGGAGTGTGAGGTATTGTAGATACGGTAAGTCGCCGACTTCAGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX904621       <-- GTTTGCGGAGTGTGAGGTATTGTAGATACGGTAAGTCGCCGACTTCAGGA  Raphanus sativus cv Rat-Tail Radish #3870
FD981081       <-- GTTTGCGGAGTGTGAGGTATTGTAGATACGGTAAGTCGCCGACTTCAGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV574244       --> ..................................................  Raphanus raphanistrum subsp. landra
FD983792       --> ..................................................  Raphanus raphanistrum subsp. landra
EV572730       --> ..................................................  Raphanus raphanistrum subsp. landra
EX908490       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD537349       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD977942       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD977672       --> GTTTGCGGAGTGTGAGGTATTGTAGA........................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552671       --> ..................................................  Raphanus raphanistrum subsp. landra

               851    -    901
UN10585        --> GGGATCTGACCGGAGACGTCGATGTTGGATATGGCTAGAGAGATGACTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556341       <-- GGGATCTGACCGGAGACGTCGATGTTGGATATGGCTAGAGAGATGACTCG
EV569787       <-- GGGTTCTGACCGGAGACGTCGATGTTGGATATGGCTAGAGAGATGACTCG
EV567884       <-- GGGATCTGACCGGAGACGTCGATGTTGGATATGGCTAGAGAGATGACTCG
FD982362       <-- GGGATCTGACCGGAGACGTCGATGTTGGATATGGCTAGAGAGATGACTCG
EX755841       <-- GGGATCTGACCGGAGACGTCGATGTTGGATATGGCTAGAGAGATGACTCG
FD540954       <-- GGGATCTGACCGGAGACGTCGATGTTGGATATGGCTAGAGAGATGACTCG
EX904621       <-- GGGATCTGACCGGAGACGTCGATGTTGGATATGGCTAGAGAGATGACTCG
FD981081       <-- GGGATCTGACCGGAGACGTCGATGTTGGATATGGCTAGAGAGATGACTCG
EV574244       --> ..................................................
FD983792       --> ..................................................
EV572730       --> ..................................................
EX908490       --> ..................................................
FD537349       --> ..................................................
FD977942       --> ..................................................
FD977672       --> ..................................................
FD552671       --> ..................................................

               901    -    951
UN10585        --> GTTTGCGTTGTCGCAATCAACAGAGTACCAGGTGCAGCAGTCGTCCTCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556341       <-- GTTTGCGTTGTCGCAATCAACAGAGCACCAGGTGCAGCAGTCGTCCTCGA
EV569787       <-- GTTTGCGTTGTCGCAATCAACAGAGTACCAGGTGCAGCAGTCGTCCTCGA
EV567884       <-- GTTTGCGTTGTCGCAATCAACAGAGTACCAGGTGCAGCAGTCGTCCTCGA
FD982362       <-- GTTTGCGTTGTCGCAATCAACAGAGTACCAGGTGCAGCAGTCGTCCTCGA
EX755841       <-- GTTTGCGTTGTCGCAATCAACAGAGTACCAGGTGCAGCAGTCGTCCTCGA
FD540954       <-- GTTTGCGTTGTCGCAATCAACAGAGTACCAGGTGCAGCAGTCGTCCTCGA
EX904621       <-- GTTTGCGTTGTCGCAATCAACAGAGTACCAGGTGCAGCAGTCGTCCTCGA
FD981081       <-- GTTTGCGTTGTCGCAATCAACAGAGTACCAGGTGCAGCAGTCGTCCTCGA
EV574244       --> ..................................................
FD983792       --> ..................................................
EV572730       --> ..................................................
EX908490       --> ..................................................
FD537349       --> ..................................................
FD977942       --> ..................................................
FD977672       --> ..................................................
FD552671       --> ..................................................

               951    -   1001
UN10585        --> GGACCCAGGAGATGTTCATGGCTTTCAGGATCTTGAGGAGGGTGTTTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556341       <-- GGACCCAGGAGATGTTCATGGCTTTCAGGATCTTGAGGAGGGTGTTTTTG
EV569787       <-- GGACCCAGGAGA......................................
EV567884       <-- GGACCCAGGAGATGTTCATGGCTTTCAGGATCTTGAGGAGGGTGTTTTTG
FD982362       <-- GGACCCAGGAGATGTTCATGGCTTTCAGGATCTTGAGGAGGGTGTTTTTG
EX755841       <-- GGACCCAGGAGATGTTCATGGCTTTCAGGATCTTGAGGAGGGTGTTTTTG
FD540954       <-- GGACCCAGGAGATGTTCATGGCTTTCAGGATCTTGAGGAGGGTGTTTTTG
EX904621       <-- GGACCCAGGAGATGTTCATGGCTTTCAGGATCTTGAGGAGGGTGTTTTTG
FD981081       <-- GGACCCAGGAGATGTTCATGGCTTTCAGGATCTTGAGGAGGGTGTTTTTG
EV574244       --> ..................................................
FD983792       --> ..................................................
EV572730       --> ..................................................
EX908490       --> ..................................................
FD537349       --> ..................................................
FD977942       --> ..................................................
FD977672       --> ..................................................
FD552671       --> ..................................................

               1001   -   1051
UN10585        --> TCATCTTTGTGACAGAGGTCTTTGGATAAAGATGTCGTTAGTAGAAGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556341       <-- TCATCTTTcc........................................
EV569787       <-- ..................................................
EV567884       <-- TCATCTTTGTGACAGAGGTCTTTGGATAAAGATGTCGTTAGTAGAAGAGC
FD982362       <-- TCATCTTTGTGACAGAGGTCTTTGGATAAAGATGTCGTTAGTAGAAGAGC
EX755841       <-- TCATCTTTGTGACAGAGGTCTTTGGATAAAGATGTCGTTAGTAGAAGAGC
FD540954       <-- TCATCTTTGTGACAGAGGTCTTTGGATAAAGATGTCGTTAGTAGAAGAGC
EX904621       <-- TCATCTTTGTGACAGAGGTCTTTGGATAAAGATGTCGTTAGTAGAAGAGC
FD981081       <-- TCATCTTTGTGACAGAGGTCTTTGGATAAAGATGTCGTTAGTAGAAGAGC
EV574244       --> ..................................................
FD983792       --> ..................................................
EV572730       --> ..................................................
EX908490       --> ..................................................
FD537349       --> ..................................................
FD977942       --> ..................................................
FD977672       --> ..................................................
FD552671       --> ..................................................

               1051   -   1101
UN10585        --> GAACAAGACCAAGAGCAGTGTCGT---TGTTTTACCACCCATAGTGTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556341       <-- ..................................................
EV569787       <-- ..................................................
EV567884       <-- GAACAAGACCAAGAGCAGTGTCGT---TGTTTTACCAACCATAGTGTGTT
FD982362       <-- GAACAAGACCAAGAGCAGTGTCGTGGTTGTTTTACCACCCATAGTGTGTT
EX755841       <-- GAACAAGACCAAGAGCAGTGTCGT---TGTTTTACCACCCATAGTGTGTT
FD540954       <-- GAACAAGACCAAGAGCAGTGTCGT---TGTTTTACCACCCATAGTGTGTT
EX904621       <-- GAACAAGACCAAGAGCAGTGTCGT---TGTTTTACCACCCATAGTcc...
FD981081       <-- GAACAAGACCAAGAGCAGTGTCGTGGTTGTTTTACCACCCATAGTGTGTT
EV574244       --> ..................................................
FD983792       --> ..................................................
EV572730       --> ..................................................
EX908490       --> ..................................................
FD537349       --> ..................................................
FD977942       --> ..................................................
FD977672       --> ..................................................
FD552671       --> ..................................................

               1101   -   1151
UN10585        --> GTTGTGTTT........
                   ~~~~~~~~~~~~~~~~~
FD556341       <-- .................
EV569787       <-- .................
EV567884       <-- GTTGTGTTTgtgtttcc
FD982362       <-- GTTGTGTTTcc......
EX755841       <-- GTTGTGTTTgtgtttcc
FD540954       <-- GTTGTGTTTgtgtttc.
EX904621       <-- .................
FD981081       <-- GTTGTGTTTgtgtttcc
EV574244       --> .................
FD983792       --> .................
EV572730       --> .................
EX908490       --> .................
FD537349       --> .................
FD977942       --> .................
FD977672       --> .................
FD552671       --> .................